BLASTX nr result
ID: Zanthoxylum22_contig00018940
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00018940
(280 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006466955.1| PREDICTED: cold shock protein 1-like [Citrus... 115 2e-23
ref|XP_006425451.1| hypothetical protein CICLE_v10027474mg [Citr... 115 2e-23
ref|XP_006380594.1| cold-shock DNA-binding family protein [Popul... 60 8e-07
emb|CCC51552.1| putative universal minicircle sequence binding p... 57 4e-06
gb|AJW77403.1| vasa [Alitta virens] 57 5e-06
ref|XP_010531090.1| PREDICTED: cold shock domain-containing prot... 57 5e-06
ref|XP_013742016.1| PREDICTED: cold shock domain-containing prot... 57 7e-06
ref|XP_013593384.1| PREDICTED: cold shock domain-containing prot... 57 7e-06
emb|CDY63400.1| BnaCnng42010D [Brassica napus] 57 7e-06
gb|KFK40166.1| hypothetical protein AALP_AA3G339200 [Arabis alpina] 57 7e-06
ref|XP_004509364.1| PREDICTED: cold shock domain-containing prot... 57 7e-06
ref|XP_822849.1| universal minicircle sequence binding protein (... 56 9e-06
emb|CAC08539.1| CCHC zinc finger protein [Trypanosoma brucei] 56 9e-06
>ref|XP_006466955.1| PREDICTED: cold shock protein 1-like [Citrus sinensis]
gi|641852366|gb|KDO71231.1| hypothetical protein
CISIN_1g047168mg [Citrus sinensis]
Length = 258
Score = 115 bits (287), Expect = 2e-23
Identities = 49/59 (83%), Positives = 51/59 (86%)
Frame = -1
Query: 178 DGVGHVARECTSNRRNSNYTNIGRGCYNCGDPEHFARDCPRLQGGSHYNNNNTSGCFKC 2
DGVGHVARECTSNRRNSNY N GCYNCGDPEHFARDCPR QGGS+ NNN+ GCFKC
Sbjct: 135 DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKC 193
>ref|XP_006425451.1| hypothetical protein CICLE_v10027474mg [Citrus clementina]
gi|557527441|gb|ESR38691.1| hypothetical protein
CICLE_v10027474mg [Citrus clementina]
Length = 264
Score = 115 bits (287), Expect = 2e-23
Identities = 49/59 (83%), Positives = 51/59 (86%)
Frame = -1
Query: 178 DGVGHVARECTSNRRNSNYTNIGRGCYNCGDPEHFARDCPRLQGGSHYNNNNTSGCFKC 2
DGVGHVARECTSNRRNSNY N GCYNCGDPEHFARDCPR QGGS+ NNN+ GCFKC
Sbjct: 135 DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKC 193
>ref|XP_006380594.1| cold-shock DNA-binding family protein [Populus trichocarpa]
gi|550334484|gb|ERP58391.1| cold-shock DNA-binding
family protein [Populus trichocarpa]
Length = 243
Score = 59.7 bits (143), Expect = 8e-07
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 11/69 (15%)
Frame = -1
Query: 175 GVGHVARECTSN----RRNSNYTNIGRGCYNCGDPEHFARDCPRLQGGSH--YNNNNTS- 17
G G + R T++ RRN+N N G GC+NCG+P H ARDC S+ YNNNN +
Sbjct: 88 GGGPIKRRTTTSGGFSRRNNNNNNNGVGCFNCGNPGHIARDCNNNSSKSYNNYNNNNNNR 147
Query: 16 ----GCFKC 2
GC+KC
Sbjct: 148 GADFGCYKC 156
>emb|CCC51552.1| putative universal minicircle sequence binding protein (UMSBP)
[Trypanosoma vivax Y486]
Length = 138
Score = 57.4 bits (137), Expect = 4e-06
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = -1
Query: 169 GHVARECTSNRRNSNYTNIGRGCYNCGDPEHFARDCPRLQGGSHYNNNNTSGCFK 5
GH++REC R + GR CYNCG P H +RDCP ++GGS + + C K
Sbjct: 20 GHISRECPGARSGNAD---GRACYNCGQPGHISRDCPGMRGGSSFGGRSCYNCGK 71
>gb|AJW77403.1| vasa [Alitta virens]
Length = 808
Score = 57.0 bits (136), Expect = 5e-06
Identities = 26/56 (46%), Positives = 33/56 (58%)
Frame = -1
Query: 169 GHVARECTSNRRNSNYTNIGRGCYNCGDPEHFARDCPRLQGGSHYNNNNTSGCFKC 2
GH +REC S +S N G GC+ CG+ HF+R+CP GG N + GCFKC
Sbjct: 240 GHFSRECPSGGGDSG--NRGNGCFKCGEEGHFSRECPS-GGGDSGNRGSGKGCFKC 292
>ref|XP_010531090.1| PREDICTED: cold shock domain-containing protein 3-like [Tarenaya
hassleriana]
Length = 235
Score = 57.0 bits (136), Expect = 5e-06
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = -1
Query: 172 VGHVARECTSNRRNSNYTNIGRG-----CYNCGDPEHFARDCPRLQGGSHYNNNNTSGCF 8
VGHVA+EC + ++Y GRG CYNCG HFAR+C ++ GG+ C+
Sbjct: 109 VGHVAKECRTGGGGNSYGGGGRGAGGEGCYNCGGVGHFARECRQISGGNGGGGGGGGSCY 168
Query: 7 KC 2
C
Sbjct: 169 SC 170
>ref|XP_013742016.1| PREDICTED: cold shock domain-containing protein 3-like [Brassica
napus]
Length = 289
Score = 56.6 bits (135), Expect = 7e-06
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = -1
Query: 172 VGHVARECTSNRRNSNYTNIGRGCYNCGDPEHFARDCPRLQGGSHYNNNNTSGCFKC 2
VGH+A++C R + G GCY CGD HFARDC R GG + + C+ C
Sbjct: 165 VGHMAKDCRGGNRYGGRGSGGEGCYTCGDVGHFARDC-RANGGGNVGGGGGNTCYTC 220
>ref|XP_013593384.1| PREDICTED: cold shock domain-containing protein 3 [Brassica
oleracea var. oleracea]
Length = 287
Score = 56.6 bits (135), Expect = 7e-06
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = -1
Query: 172 VGHVARECTSNRRNSNYTNIGRGCYNCGDPEHFARDCPRLQGGSHYNNNNTSGCFKC 2
VGH+A++C R + G GCY CGD HFARDC R GG + + C+ C
Sbjct: 163 VGHMAKDCRGGNRYGGRGSGGEGCYTCGDVGHFARDC-RANGGGNVGGGGGNTCYTC 218
>emb|CDY63400.1| BnaCnng42010D [Brassica napus]
Length = 219
Score = 56.6 bits (135), Expect = 7e-06
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = -1
Query: 172 VGHVARECTSNRRNSNYTNIGRGCYNCGDPEHFARDCPRLQGGSHYNNNNTSGCFKC 2
VGH+A++C R + G GCY CGD HFARDC R GG + + C+ C
Sbjct: 95 VGHMAKDCRGGNRYGGRGSGGEGCYTCGDVGHFARDC-RANGGGNVGGGGGNTCYTC 150
>gb|KFK40166.1| hypothetical protein AALP_AA3G339200 [Arabis alpina]
Length = 268
Score = 56.6 bits (135), Expect = 7e-06
Identities = 29/58 (50%), Positives = 33/58 (56%)
Frame = -1
Query: 175 GVGHVARECTSNRRNSNYTNIGRGCYNCGDPEHFARDCPRLQGGSHYNNNNTSGCFKC 2
GVGH+AR CTS R++ G GCY CG H ARDC R GGS + CFKC
Sbjct: 201 GVGHMARVCTSKRQSGAG---GGGCYECGGIGHLARDCDR--GGSGGGGGGSGKCFKC 253
>ref|XP_004509364.1| PREDICTED: cold shock domain-containing protein 3 [Cicer arietinum]
Length = 260
Score = 56.6 bits (135), Expect = 7e-06
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = -1
Query: 175 GVGHVARECTSNRRNSNYTNIGRGCYNCGDPEHFARDCP----RLQGGSHYNNNNTSG-- 14
G+GH+AR+C + R S G GCY CG+ H ARDC R +GG NNN+ G
Sbjct: 180 GIGHIARDCATARVGSG----GGGCYKCGEVGHIARDCSIEGGRFEGGRFGGNNNSGGGG 235
Query: 13 ------CFKC 2
CF C
Sbjct: 236 NGGKNTCFNC 245
>ref|XP_822849.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
brucei brucei TREU927] gi|788017910|ref|XP_011777919.1|
predicted zinc finger protein [Trypanosoma brucei
gambiense DAL972] gi|70832517|gb|EAN78021.1| universal
minicircle sequence binding protein (UMSBP), putative
[Trypanosoma brucei brucei TREU927]
gi|261332660|emb|CBH15655.1| predicted zinc finger
protein [Trypanosoma brucei gambiense DAL972]
Length = 140
Score = 56.2 bits (134), Expect = 9e-06
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = -1
Query: 169 GHVARECTSNRRNSNYTNIGRGCYNCGDPEHFARDCPRLQGGSHYNNNNTSGCFKC 2
GH++REC + R N GR CYNCG P+H +RDCP + G N C+ C
Sbjct: 20 GHMSRECPNARSGGNMGG-GRSCYNCGQPDHISRDCPNARTGG--NMGGGRSCYNC 72
>emb|CAC08539.1| CCHC zinc finger protein [Trypanosoma brucei]
Length = 140
Score = 56.2 bits (134), Expect = 9e-06
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = -1
Query: 169 GHVARECTSNRRNSNYTNIGRGCYNCGDPEHFARDCPRLQGGSHYNNNNTSGCFKC 2
GH++REC + R N GR CYNCG P+H +RDCP + G N C+ C
Sbjct: 20 GHMSRECPNARSGGNMGG-GRSCYNCGQPDHISRDCPNARTGG--NMGGGRSCYNC 72