BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00014851
         (1910 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp...   821   0.0  
ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citr...   778   0.0  
gb|KDO59071.1| hypothetical protein CISIN_1g041729mg [Citrus sin...   706   0.0  
ref|XP_010660411.1| PREDICTED: chloroplastic group IIA intron sp...   633   e-178
ref|XP_007033218.1| maize chloroplast splicing factor CRS1, puta...   629   e-177
ref|XP_007033217.1| maize chloroplast splicing factor CRS1, puta...   629   e-177
ref|XP_010660413.1| PREDICTED: chloroplastic group IIA intron sp...   625   e-176
ref|XP_007033219.1| maize chloroplast splicing factor CRS1, puta...   623   e-175
ref|XP_007033220.1| maize chloroplast splicing factor CRS1, puta...   623   e-175
ref|XP_007033221.1| maize chloroplast splicing factor CRS1, puta...   600   e-168
emb|CBI33632.3| unnamed protein product [Vitis vinifera]              598   e-168
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...   598   e-168
ref|XP_012078016.1| PREDICTED: chloroplastic group IIA intron sp...   593   e-166
ref|XP_010108863.1| Chloroplastic group IIA intron splicing faci...   582   e-163
gb|KHG25518.1| hypothetical protein F383_03195 [Gossypium arboreum]   580   e-162
ref|XP_009357796.1| PREDICTED: chloroplastic group IIA intron sp...   577   e-161
ref|XP_009357794.1| PREDICTED: chloroplastic group IIA intron sp...   577   e-161
ref|XP_012491296.1| PREDICTED: chloroplastic group IIA intron sp...   576   e-161
ref|XP_008381487.1| PREDICTED: chloroplastic group IIA intron sp...   572   e-160
ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prun...   568   e-159

>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857343|ref|XP_006482226.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 771

 Score =  821 bits (2121), Expect = 0.0
 Identities = 420/508 (82%), Positives = 449/508 (88%)
 Frame = -3

Query: 1893 ASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNTTTLDENTCLKDGEENTLPT 1714
            +SKSSVKM    AD +E  LSKSTHL LE KV+ SWIKSNT TLD+N  LKDGEEN+LPT
Sbjct: 267  SSKSSVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRSLKDGEENSLPT 326

Query: 1713 SIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGFKPPF 1534
            SIFMDK  R   ID+SLYEREGDRLLDGLGPRFVDWWMW+PLPVD DLLPEVVPGFKPPF
Sbjct: 327  SIFMDKNLR---IDKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPF 383

Query: 1533 RLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAKIAVK 1354
            RLSPPDARSK+T+DE TYLRKLAHPLPTHFVLGRNRGLQGLA AILKLWEKSLVAKI VK
Sbjct: 384  RLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEKSLVAKITVK 443

Query: 1353 WGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERELQICQL 1174
            WGIPNTDNEQMA+ELK LTGGVLLLRNKFLIILYRG DFLPCGVENLI ERERELQICQ 
Sbjct: 444  WGIPNTDNEQMANELKHLTGGVLLLRNKFLIILYRGNDFLPCGVENLIVERERELQICQN 503

Query: 1173 HEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLAADIXXX 994
            HEEGARLKAIETF LP EP E+ S+AGTLSEF++IQ++FGD+ M NREFELQL A+I   
Sbjct: 504  HEEGARLKAIETFHLPHEPLEKTSKAGTLSEFQNIQSDFGDLKMGNREFELQLEAEIEDL 563

Query: 993  XXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRKIGLKMN 814
                      LFILNIKIEKSAKELS+LNSAWKP EQDPD+EMITEEERQCL KIG+KMN
Sbjct: 564  ERELRKQERKLFILNIKIEKSAKELSRLNSAWKPREQDPDLEMITEEERQCLHKIGMKMN 623

Query: 813  SNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGILISVDK 634
            SNLLLGRRGVFDGVIEGL+QHWK+REVA+VIT QKLFAQVI+TAKSLV E+GGILISVDK
Sbjct: 624  SNLLLGRRGVFDGVIEGLHQHWKYREVARVITKQKLFAQVIYTAKSLVAESGGILISVDK 683

Query: 633  LKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQRAISEWK 454
            LKEGHAIIIYRGKNYRRP KLMT+NLLSKRQALRRSLEMQRLGSLKF AYQRQR IS  K
Sbjct: 684  LKEGHAIIIYRGKNYRRPLKLMTQNLLSKRQALRRSLEMQRLGSLKFFAYQRQRVISNLK 743

Query: 453  TKLAELQENSQKNMKISAQTDVRLSDTS 370
             KLAELQE+ QKNMKI AQTDVR +DTS
Sbjct: 744  IKLAELQESRQKNMKIIAQTDVRHTDTS 771


>ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
            gi|557532797|gb|ESR43980.1| hypothetical protein
            CICLE_v10013368mg [Citrus clementina]
          Length = 770

 Score =  778 bits (2009), Expect = 0.0
 Identities = 407/520 (78%), Positives = 436/520 (83%), Gaps = 13/520 (2%)
 Frame = -3

Query: 1890 SKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNTTTLDENTCLKDGEENTLPTS 1711
            SKSSVKM    AD +E  LSKSTHL LE KV+ SWIKSNT TLD+N  LKDGEEN+LPTS
Sbjct: 274  SKSSVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRSLKDGEENSLPTS 333

Query: 1710 IFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGFKPPFR 1531
            IFMDK  R   ID+SLYEREGDRLLDGLGPRFVDWWMW+PLPVD DLLPEVVPGFKPPFR
Sbjct: 334  IFMDKNLR---IDKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFR 390

Query: 1530 LSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAKIAVKW 1351
            LSPPDARSK+T+DE TYLRKLAHPLPTHFVLGRNRGLQGLA AILKLWEKSLVAKIAVKW
Sbjct: 391  LSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEKSLVAKIAVKW 450

Query: 1350 GIPNTDNEQMADELKR-------------LTGGVLLLRNKFLIILYRGKDFLPCGVENLI 1210
            GIPNTDNEQMA+ELK              LTGGVLLLRNKFLIILYRGKDFLPCGVENLI
Sbjct: 451  GIPNTDNEQMANELKNFKFSDDGVLLMQHLTGGVLLLRNKFLIILYRGKDFLPCGVENLI 510

Query: 1209 FERERELQICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNRE 1030
             ERERELQICQ HEEGARLKAIETF LPDEP E+ S+AGTLSEF++IQ++FGD+ M NRE
Sbjct: 511  VERERELQICQNHEEGARLKAIETFHLPDEPLEKTSKAGTLSEFQNIQSDFGDLKMGNRE 570

Query: 1029 FELQLAADIXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEE 850
            FELQL A+I             LFILNIKIEKSAKELS+LNSAWKP EQDPD+EMITEEE
Sbjct: 571  FELQLEAEIEDLERELRKQERKLFILNIKIEKSAKELSRLNSAWKPREQDPDLEMITEEE 630

Query: 849  RQCLRKIGLKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLV 670
            RQCL KIG+K+NSNLLLGRRGVFDGVIEGL+QHWK+REVA+VIT QKLFAQVI+TAKSLV
Sbjct: 631  RQCLHKIGMKINSNLLLGRRGVFDGVIEGLHQHWKYREVARVITKQKLFAQVIYTAKSLV 690

Query: 669  VETGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFV 490
             E+GGILISVDKLKEGHAIIIYRGKNYRRP KLMT+NLLSKRQALRRSLEMQRLG     
Sbjct: 691  AESGGILISVDKLKEGHAIIIYRGKNYRRPLKLMTQNLLSKRQALRRSLEMQRLG----- 745

Query: 489  AYQRQRAISEWKTKLAELQENSQKNMKISAQTDVRLSDTS 370
                           AELQE+ QKNMKI AQTDVR +DTS
Sbjct: 746  ---------------AELQESRQKNMKIIAQTDVRHTDTS 770


>gb|KDO59071.1| hypothetical protein CISIN_1g041729mg [Citrus sinensis]
          Length = 744

 Score =  706 bits (1822), Expect(2) = 0.0
 Identities = 370/487 (75%), Positives = 400/487 (82%), Gaps = 21/487 (4%)
 Frame = -3

Query: 1890 SKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNTTTLDENTCLKDGEENTLPTS 1711
            SKSSVKM    AD +E  LSKSTHL LE KV+ SWIKSNT TLD+N  LKDGEEN+LPTS
Sbjct: 214  SKSSVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRSLKDGEENSLPTS 273

Query: 1710 IFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGFKPPFR 1531
            IFMDK  R   ID+SLYEREGDRLLDGLGPRFVDWWMW+PLPVD DLLPEVVPGFKPPFR
Sbjct: 274  IFMDKNLR---IDKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFR 330

Query: 1530 LSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAKIAVKW 1351
            LSPPDARSK+T+DE TYLRKLAHPLPTHFVLGRNRGLQGLA AILKLWEKSLVAKI VKW
Sbjct: 331  LSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEKSLVAKITVKW 390

Query: 1350 GIPNTDNEQMADELK---------------------RLTGGVLLLRNKFLIILYRGKDFL 1234
            GIPNTDNEQMA+ELK                      LTGGVLLLRNKFLIILYRGKDFL
Sbjct: 391  GIPNTDNEQMANELKASLAKWKPNFKFSDDGVLLMQHLTGGVLLLRNKFLIILYRGKDFL 450

Query: 1233 PCGVENLIFERERELQICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFG 1054
            PCGVENLI ERERELQICQ HEEGARLKAIETF LPDEP E+ S+AGTLSEF++IQ++FG
Sbjct: 451  PCGVENLIVERERELQICQNHEEGARLKAIETFHLPDEPLEKTSKAGTLSEFQNIQSDFG 510

Query: 1053 DMGMDNREFELQLAADIXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPD 874
            D+ M NREFELQL A+I                L  ++ K  ++L          EQDPD
Sbjct: 511  DLKMGNREFELQLEAEIED--------------LERELRKQERKLL--------LEQDPD 548

Query: 873  MEMITEEERQCLRKIGLKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQV 694
            +EMITEEERQCL KIG+K+NSNLLLGRRGVFDGVIEGL+QHWK+REVA+VIT QKLFAQV
Sbjct: 549  LEMITEEERQCLHKIGMKINSNLLLGRRGVFDGVIEGLHQHWKYREVARVITKQKLFAQV 608

Query: 693  IFTAKSLVVETGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQ 514
            I+TAKSLV E+GGILISVDKLKEGHAIIIYRGKNYRRP KLMT+NLLSKRQALRRSLEMQ
Sbjct: 609  IYTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPLKLMTQNLLSKRQALRRSLEMQ 668

Query: 513  RLGSLKF 493
            RLGSLKF
Sbjct: 669  RLGSLKF 675



 Score = 29.3 bits (64), Expect(2) = 0.0
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -2

Query: 490 RIPETASHLRMENQT 446
           RIPETA HL+ ENQT
Sbjct: 677 RIPETAGHLQFENQT 691


>ref|XP_010660411.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Vitis vinifera]
            gi|731417745|ref|XP_010660412.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Vitis vinifera]
          Length = 828

 Score =  633 bits (1633), Expect = e-178
 Identities = 321/496 (64%), Positives = 388/496 (78%)
 Frame = -3

Query: 1905 SFRFASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNTTTLDENTCLKDGEEN 1726
            +++  SK   KM      G + + SK    + E+ +  S IK + +T  E    KDGEE+
Sbjct: 288  NYQSTSKHFQKMRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEED 347

Query: 1725 TLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGF 1546
            + PT IFM++   +QP++ SLYERE DRLLDGLGPRF+DWW  +PLPVDADLLPEV+PGF
Sbjct: 348  SSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGF 407

Query: 1545 KPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAK 1366
            +PPFRLSPP  RSK+T+DE TYLRKLA+ LPTHFVLGRNR LQGLAAAILKLWEKSL+ K
Sbjct: 408  RPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVK 467

Query: 1365 IAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERELQ 1186
            IA+KWGIPNT NEQMA+ELK LTGGVLLLRNKF IILYRGKDFLPC V NLI ERE E +
Sbjct: 468  IAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFK 527

Query: 1185 ICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLAAD 1006
             CQ+ EE ARLKAIET  + D+P    S  GTLSEF++I+TEF  +   N E E++L A+
Sbjct: 528  GCQIREEDARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAE 587

Query: 1005 IXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRKIG 826
                          LFIL  KIE+SAK L+KLNSAW+P++ D D EMITEEER+C RKIG
Sbjct: 588  KERLEKELKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIG 647

Query: 825  LKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGILI 646
             KM+S+LLLGRRGVFDGVIEGL+QHWKHRE+ KVITMQ+ F+QV++TAK L  E+GG+L+
Sbjct: 648  QKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLV 707

Query: 645  SVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQRAI 466
            S+DKLKEGHAIIIYRGKNYRRP KL+ +NLL+KR+AL RSLEMQR+GSLKF AYQRQ+AI
Sbjct: 708  SIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAI 767

Query: 465  SEWKTKLAELQENSQK 418
            S+ K KLA+LQ+ S++
Sbjct: 768  SDLKLKLADLQKGSRR 783


>ref|XP_007033218.1| maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma
            cacao] gi|508712247|gb|EOY04144.1| maize chloroplast
            splicing factor CRS1, putative isoform 2 [Theobroma
            cacao]
          Length = 804

 Score =  629 bits (1621), Expect = e-177
 Identities = 320/492 (65%), Positives = 384/492 (78%)
 Frame = -3

Query: 1905 SFRFASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNTTTLDENTCLKDGEEN 1726
            S    SK S   +   ADG+E + S  +HL   N ++ S  K N +TL      +D E+ 
Sbjct: 305  SHGLTSKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKE 364

Query: 1725 TLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGF 1546
            ++P +IFM +    QP+  SLYERE DRLLDGLGPRF+DWWM +PLP+DADLLPE VPGF
Sbjct: 365  SMPINIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGF 424

Query: 1545 KPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAK 1366
            +PP RLSPP+ R  +T+DE  YLRKL HPLP HF LG+NR LQGLAAAILKLWEKSL+AK
Sbjct: 425  RPPLRLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAK 484

Query: 1365 IAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERELQ 1186
            IA+KWGI NTDNEQMA ELK LTGGVLL+RNKFL+ILYRGKDFLP GV NL+ ERE  L+
Sbjct: 485  IAIKWGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALR 544

Query: 1185 ICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLAAD 1006
             CQL+EEGAR+K  ET  + DEP  + S  GTLSEF DIQT FGD+  ++ E ELQL A 
Sbjct: 545  RCQLNEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQ 604

Query: 1005 IXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRKIG 826
                          L ILNIKIEKSAKEL+KL S+ +P+EQD D+E+ITEEER+CLRKIG
Sbjct: 605  KENLERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIG 664

Query: 825  LKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGILI 646
            LK+NS L+LGRRGVF+GVIEG+YQHWKHREV KVITMQ++FA+VI+TAK LV ETGGIL+
Sbjct: 665  LKLNSFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILV 724

Query: 645  SVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQRAI 466
            SV+KLKEGHA+IIYRGKNYRRP KLMT NLL+KR+ALR+S+E+QR+GSLKF AYQR++AI
Sbjct: 725  SVEKLKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAI 784

Query: 465  SEWKTKLAELQE 430
             + K KLAEL++
Sbjct: 785  LDLKLKLAELKD 796


>ref|XP_007033217.1| maize chloroplast splicing factor CRS1, putative isoform 1 [Theobroma
            cacao] gi|508712246|gb|EOY04143.1| maize chloroplast
            splicing factor CRS1, putative isoform 1 [Theobroma
            cacao]
          Length = 818

 Score =  629 bits (1621), Expect = e-177
 Identities = 320/492 (65%), Positives = 384/492 (78%)
 Frame = -3

Query: 1905 SFRFASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNTTTLDENTCLKDGEEN 1726
            S    SK S   +   ADG+E + S  +HL   N ++ S  K N +TL      +D E+ 
Sbjct: 305  SHGLTSKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKE 364

Query: 1725 TLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGF 1546
            ++P +IFM +    QP+  SLYERE DRLLDGLGPRF+DWWM +PLP+DADLLPE VPGF
Sbjct: 365  SMPINIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGF 424

Query: 1545 KPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAK 1366
            +PP RLSPP+ R  +T+DE  YLRKL HPLP HF LG+NR LQGLAAAILKLWEKSL+AK
Sbjct: 425  RPPLRLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAK 484

Query: 1365 IAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERELQ 1186
            IA+KWGI NTDNEQMA ELK LTGGVLL+RNKFL+ILYRGKDFLP GV NL+ ERE  L+
Sbjct: 485  IAIKWGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALR 544

Query: 1185 ICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLAAD 1006
             CQL+EEGAR+K  ET  + DEP  + S  GTLSEF DIQT FGD+  ++ E ELQL A 
Sbjct: 545  RCQLNEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQ 604

Query: 1005 IXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRKIG 826
                          L ILNIKIEKSAKEL+KL S+ +P+EQD D+E+ITEEER+CLRKIG
Sbjct: 605  KENLERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIG 664

Query: 825  LKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGILI 646
            LK+NS L+LGRRGVF+GVIEG+YQHWKHREV KVITMQ++FA+VI+TAK LV ETGGIL+
Sbjct: 665  LKLNSFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILV 724

Query: 645  SVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQRAI 466
            SV+KLKEGHA+IIYRGKNYRRP KLMT NLL+KR+ALR+S+E+QR+GSLKF AYQR++AI
Sbjct: 725  SVEKLKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAI 784

Query: 465  SEWKTKLAELQE 430
             + K KLAEL++
Sbjct: 785  LDLKLKLAELKD 796


>ref|XP_010660413.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Vitis vinifera]
          Length = 789

 Score =  625 bits (1612), Expect = e-176
 Identities = 321/502 (63%), Positives = 384/502 (76%), Gaps = 5/502 (0%)
 Frame = -3

Query: 1905 SFRFASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNTTTLDENTCLKDGEEN 1726
            +++  SK   KM      G + + SK    + E+ +  S IK + +T  E    KDGEE+
Sbjct: 288  NYQSTSKHFQKMRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEED 347

Query: 1725 TLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGF 1546
            + PT IFM++   +QP++ SLYERE DRLLDGLGPRF+DWW  +PLPVDADLLPEV+PGF
Sbjct: 348  SSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGF 407

Query: 1545 KPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAK 1366
            +PPFRLSPP  RSK+T+DE TYLRKLA+ LPTHFVLGRNR LQGLAAAILKLWEKSL+ K
Sbjct: 408  RPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVK 467

Query: 1365 IAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERELQ 1186
            IA+KWGIPNT NEQMA+ELK LTGGVLLLRNKF IILYRGKDFLPC V NLI ERE E +
Sbjct: 468  IAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFK 527

Query: 1185 ICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLAAD 1006
             CQ+ EE ARLKAIET  + D+P    S  GTLSEF++I+TEF  +   N E E++L A+
Sbjct: 528  GCQIREEDARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAE 587

Query: 1005 IXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRKIG 826
                          LFIL  KIE+SAK L+KLNSAW+P++ D D EMITEEER+C RKIG
Sbjct: 588  KERLEKELKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIG 647

Query: 825  LKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGILI 646
             KM+S+LLLGRRGVFDGVIEGL+QHWKHRE+ KVITMQ+ F+QV++TAK L  E+GG+L+
Sbjct: 648  QKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLV 707

Query: 645  SVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQRAI 466
            S+DKLKEGHAIIIYRGKNYRRP KL+ +NLL+KR+AL RSLEMQR+GSLKF AYQRQ+AI
Sbjct: 708  SIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAI 767

Query: 465  SEWKTKL-----AELQENSQKN 415
            S+ K KL         E  QKN
Sbjct: 768  SDLKLKLFMKLSGRSTERKQKN 789


>ref|XP_007033219.1| maize chloroplast splicing factor CRS1, putative isoform 3 [Theobroma
            cacao] gi|508712248|gb|EOY04145.1| maize chloroplast
            splicing factor CRS1, putative isoform 3 [Theobroma
            cacao]
          Length = 788

 Score =  623 bits (1607), Expect = e-175
 Identities = 317/490 (64%), Positives = 380/490 (77%)
 Frame = -3

Query: 1905 SFRFASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNTTTLDENTCLKDGEEN 1726
            S    SK S   +   ADG+E + S  +HL   N ++ S  K N +TL      +D E+ 
Sbjct: 279  SHGLTSKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKE 338

Query: 1725 TLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGF 1546
            ++P +IFM +    QP+  SLYERE DRLLDGLGPRF+DWWM +PLP+DADLLPE VPGF
Sbjct: 339  SMPINIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGF 398

Query: 1545 KPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAK 1366
            +PP RLSPP+ R  +T+DE  YLRKL HPLP HF LG+NR LQGLAAAILKLWEKSL+AK
Sbjct: 399  RPPLRLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAK 458

Query: 1365 IAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERELQ 1186
            IA+KWGI NTDNEQMA ELK LTGGVLL+RNKFL+ILYRGKDFLP GV NL+ ERE  L+
Sbjct: 459  IAIKWGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALR 518

Query: 1185 ICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLAAD 1006
             CQL+EEGAR+K  ET  + DEP  + S  GTLSEF DIQT FGD+  ++ E ELQL A 
Sbjct: 519  RCQLNEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQ 578

Query: 1005 IXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRKIG 826
                          L ILNIKIEKSAKEL+KL S+ +P+EQD D+E+ITEEER+CLRKIG
Sbjct: 579  KENLERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIG 638

Query: 825  LKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGILI 646
            LK+NS L+LGRRGVF+GVIEG+YQHWKHREV KVITMQ++FA+VI+TAK LV ETGGIL+
Sbjct: 639  LKLNSFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILV 698

Query: 645  SVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQRAI 466
            SV+KLKEGHA+IIYRGKNYRRP KLMT NLL+KR+ALR+S+E+QR+GSLKF AYQR++AI
Sbjct: 699  SVEKLKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAI 758

Query: 465  SEWKTKLAEL 436
             + K KL  +
Sbjct: 759  LDLKLKLVRI 768


>ref|XP_007033220.1| maize chloroplast splicing factor CRS1, putative isoform 4 [Theobroma
            cacao] gi|508712249|gb|EOY04146.1| maize chloroplast
            splicing factor CRS1, putative isoform 4 [Theobroma
            cacao]
          Length = 767

 Score =  623 bits (1606), Expect = e-175
 Identities = 317/489 (64%), Positives = 380/489 (77%)
 Frame = -3

Query: 1905 SFRFASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNTTTLDENTCLKDGEEN 1726
            S    SK S   +   ADG+E + S  +HL   N ++ S  K N +TL      +D E+ 
Sbjct: 279  SHGLTSKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKE 338

Query: 1725 TLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGF 1546
            ++P +IFM +    QP+  SLYERE DRLLDGLGPRF+DWWM +PLP+DADLLPE VPGF
Sbjct: 339  SMPINIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGF 398

Query: 1545 KPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAK 1366
            +PP RLSPP+ R  +T+DE  YLRKL HPLP HF LG+NR LQGLAAAILKLWEKSL+AK
Sbjct: 399  RPPLRLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAK 458

Query: 1365 IAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERELQ 1186
            IA+KWGI NTDNEQMA ELK LTGGVLL+RNKFL+ILYRGKDFLP GV NL+ ERE  L+
Sbjct: 459  IAIKWGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALR 518

Query: 1185 ICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLAAD 1006
             CQL+EEGAR+K  ET  + DEP  + S  GTLSEF DIQT FGD+  ++ E ELQL A 
Sbjct: 519  RCQLNEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQ 578

Query: 1005 IXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRKIG 826
                          L ILNIKIEKSAKEL+KL S+ +P+EQD D+E+ITEEER+CLRKIG
Sbjct: 579  KENLERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIG 638

Query: 825  LKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGILI 646
            LK+NS L+LGRRGVF+GVIEG+YQHWKHREV KVITMQ++FA+VI+TAK LV ETGGIL+
Sbjct: 639  LKLNSFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILV 698

Query: 645  SVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQRAI 466
            SV+KLKEGHA+IIYRGKNYRRP KLMT NLL+KR+ALR+S+E+QR+GSLKF AYQR++AI
Sbjct: 699  SVEKLKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAI 758

Query: 465  SEWKTKLAE 439
             + K KL +
Sbjct: 759  LDLKLKLGK 767


>ref|XP_007033221.1| maize chloroplast splicing factor CRS1, putative isoform 5 [Theobroma
            cacao] gi|508712250|gb|EOY04147.1| maize chloroplast
            splicing factor CRS1, putative isoform 5 [Theobroma
            cacao]
          Length = 788

 Score =  600 bits (1546), Expect = e-168
 Identities = 305/471 (64%), Positives = 364/471 (77%)
 Frame = -3

Query: 1905 SFRFASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNTTTLDENTCLKDGEEN 1726
            S    SK S   +   ADG+E + S  +HL   N ++ S  K N +TL      +D E+ 
Sbjct: 305  SHGLTSKISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKE 364

Query: 1725 TLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGF 1546
            ++P +IFM +    QP+  SLYERE DRLLDGLGPRF+DWWM +PLP+DADLLPE VPGF
Sbjct: 365  SMPINIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGF 424

Query: 1545 KPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAK 1366
            +PP RLSPP+ R  +T+DE  YLRKL HPLP HF LG+NR LQGLAAAILKLWEKSL+AK
Sbjct: 425  RPPLRLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAK 484

Query: 1365 IAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERELQ 1186
            IA+KWGI NTDNEQMA ELK LTGGVLL+RNKFL+ILYRGKDFLP GV NL+ ERE  L+
Sbjct: 485  IAIKWGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALR 544

Query: 1185 ICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLAAD 1006
             CQL+EEGAR+K  ET  + DEP  + S  GTLSEF DIQT FGD+  ++ E ELQL A 
Sbjct: 545  RCQLNEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQ 604

Query: 1005 IXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRKIG 826
                          L ILNIKIEKSAKEL+KL S+ +P+EQD D+E+ITEEER+CLRKIG
Sbjct: 605  KENLERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIG 664

Query: 825  LKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGILI 646
            LK+NS L+LGRRGVF+GVIEG+YQHWKHREV KVITMQ++FA+VI+TAK LV ETGGIL+
Sbjct: 665  LKLNSFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILV 724

Query: 645  SVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKF 493
            SV+KLKEGHA+IIYRGKNYRRP KLMT NLL+KR+ALR+S+E+QR+G   F
Sbjct: 725  SVEKLKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGVSPF 775


>emb|CBI33632.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  598 bits (1543), Expect = e-168
 Identities = 298/423 (70%), Positives = 351/423 (82%)
 Frame = -3

Query: 1686 TQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGFKPPFRLSPPDARS 1507
            +QP++ SLYERE DRLLDGLGPRF+DWW  +PLPVDADLLPEV+PGF+PPFRLSPP  RS
Sbjct: 62   SQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRS 121

Query: 1506 KVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAKIAVKWGIPNTDNE 1327
            K+T+DE TYLRKLA+ LPTHFVLGRNR LQGLAAAILKLWEKSL+ KIA+KWGIPNT NE
Sbjct: 122  KLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNE 181

Query: 1326 QMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERELQICQLHEEGARLKA 1147
            QMA+ELK LTGGVLLLRNKF IILYRGKDFLPC V NLI ERE E + CQ+ EE ARLKA
Sbjct: 182  QMANELKCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQIREEDARLKA 241

Query: 1146 IETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLAADIXXXXXXXXXXXX 967
            IET  + D+P    S  GTLSEF++I+TEF  +   N E E++L A+             
Sbjct: 242  IETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKELKKQER 301

Query: 966  XLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRKIGLKMNSNLLLGRRG 787
             LFIL  KIE+SAK L+KLNSAW+P++ D D EMITEEER+C RKIG KM+S+LLLGRRG
Sbjct: 302  NLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRG 361

Query: 786  VFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGILISVDKLKEGHAIII 607
            VFDGVIEGL+QHWKHRE+ KVITMQ+ F+QV++TAK L  E+GG+L+S+DKLKEGHAIII
Sbjct: 362  VFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIII 421

Query: 606  YRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQRAISEWKTKLAELQEN 427
            YRGKNYRRP KL+ +NLL+KR+AL RSLEMQR+GSLKF AYQRQ+AIS+ K KLA+LQ+ 
Sbjct: 422  YRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLADLQKG 481

Query: 426  SQK 418
            S++
Sbjct: 482  SRR 484


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
            gi|223544130|gb|EEF45655.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 742

 Score =  598 bits (1543), Expect = e-168
 Identities = 309/454 (68%), Positives = 366/454 (80%)
 Frame = -3

Query: 1779 SNTTTLDENTCLKDGEENTLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWM 1600
            S+ +T+DE    KDGEE  +PTSIF+     T  I+ SL+ERE DRLLDGLGPRFVDWWM
Sbjct: 291  SHVSTMDEKIGSKDGEEEYIPTSIFIGDDANTPTINGSLFERETDRLLDGLGPRFVDWWM 350

Query: 1599 WEPLPVDADLLPEVVPGFKPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGL 1420
             +PLPVDADLLPEVV GF PP R     AR+K+ +DE TYLRKLA+ LPTHFVLGRNR L
Sbjct: 351  RKPLPVDADLLPEVVAGFMPPSRFHY--ARAKLKDDELTYLRKLAYALPTHFVLGRNRRL 408

Query: 1419 QGLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKD 1240
            QGLAAAILKLWE+SL+AKIAVKWGIPNTDNEQMA+ELK LTGGVLLLRNKF IIL+RGKD
Sbjct: 409  QGLAAAILKLWERSLIAKIAVKWGIPNTDNEQMANELKHLTGGVLLLRNKFFIILFRGKD 468

Query: 1239 FLPCGVENLIFERERELQICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTE 1060
            FLPC V +L+ +RE EL+ICQL+EEGARLKAIET    DE   + ++ GTL+EF+DIQ  
Sbjct: 469  FLPCQVADLVVKRENELKICQLNEEGARLKAIETSFTDDELVVKATKIGTLNEFQDIQVR 528

Query: 1059 FGDMGMDNREFELQLAADIXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQD 880
            F ++    R+ +LQL A+              L IL  KIEKSA+ELSKLNSAW P++QD
Sbjct: 529  FKELAKGYRDSKLQLEAEKEKLERELRIQEHKLLILKSKIEKSARELSKLNSAWAPADQD 588

Query: 879  PDMEMITEEERQCLRKIGLKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFA 700
             D+EM+TEEER+CLRKIGLKM S+LLLGRRGVFDGVIEGL+QHWKHREV KVI++Q++FA
Sbjct: 589  ADLEMMTEEERECLRKIGLKMRSSLLLGRRGVFDGVIEGLHQHWKHREVVKVISLQRMFA 648

Query: 699  QVIFTAKSLVVETGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLE 520
            QVI TAK L  ETGGIL+S+DKLKEGHAIIIYRGKNYRRP +L+  NLL+KR+AL RSLE
Sbjct: 649  QVIRTAKFLEAETGGILVSIDKLKEGHAIIIYRGKNYRRPQRLL-NNLLTKRKALCRSLE 707

Query: 519  MQRLGSLKFVAYQRQRAISEWKTKLAELQENSQK 418
            MQR+GSL+F AYQRQ +I E K +LA+LQE+ ++
Sbjct: 708  MQRIGSLRFFAYQRQHSIRELKFQLAQLQESEER 741


>ref|XP_012078016.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Jatropha curcas]
          Length = 742

 Score =  593 bits (1528), Expect = e-166
 Identities = 309/459 (67%), Positives = 365/459 (79%)
 Frame = -3

Query: 1779 SNTTTLDENTCLKDGEENTLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWM 1600
            S  + +D   C K  EE+++ TSIFM++     PI+ SL+ERE DRLLDGLGPRFVDWWM
Sbjct: 281  SYISCMDSKICSKGEEEDSISTSIFMEEDANLSPINGSLFERETDRLLDGLGPRFVDWWM 340

Query: 1599 WEPLPVDADLLPEVVPGFKPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGL 1420
             +PLPVDADLLP VVPGFKPP RL P   R+K+ +DE TYLRKLAH LPTHFVLGRNRGL
Sbjct: 341  RKPLPVDADLLPAVVPGFKPPSRLCPSYGRAKLKDDELTYLRKLAHALPTHFVLGRNRGL 400

Query: 1419 QGLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKD 1240
            QGLAAAILKLWEKSL+AKIAVKWGI N +NEQMA+ELK LTGGVLLLRNKF IILYRGKD
Sbjct: 401  QGLAAAILKLWEKSLIAKIAVKWGIQNANNEQMANELKILTGGVLLLRNKFFIILYRGKD 460

Query: 1239 FLPCGVENLIFERERELQICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTE 1060
            FLPC V NLI +RE EL+ C L+EEGARLKAIE+F   DE     S+ GTL+EF+DIQ +
Sbjct: 461  FLPCQVANLIADREIELKRCHLNEEGARLKAIESFYSADELSVNTSKIGTLNEFQDIQAK 520

Query: 1059 FGDMGMDNREFELQLAADIXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQD 880
            FG++  +  E +++L A               L+IL  KIEKSA+ELSKL SA   ++QD
Sbjct: 521  FGELAKEYMESKIKLEAKKEKLEKELRNQEHKLYILQRKIEKSARELSKLRSASAAADQD 580

Query: 879  PDMEMITEEERQCLRKIGLKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFA 700
             D+EM+TEEER+C RKIGLKM+S+L+LGRRGVFDGV+EGL+QHWKHREV KVITMQ++F+
Sbjct: 581  VDLEMMTEEERECFRKIGLKMHSSLVLGRRGVFDGVMEGLHQHWKHREVVKVITMQRIFS 640

Query: 699  QVIFTAKSLVVETGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLE 520
            QVI TAK L  E+GGIL+SVDKLKEGHAIIIYRGKNY+RP KL+  NL +K +ALRRSLE
Sbjct: 641  QVIRTAKFLEAESGGILVSVDKLKEGHAIIIYRGKNYKRPPKLL-NNLPTKIEALRRSLE 699

Query: 519  MQRLGSLKFVAYQRQRAISEWKTKLAELQENSQKNMKIS 403
            MQR+GSLKF A+QRQ AI E K KLA+LQE+  K+MK S
Sbjct: 700  MQRIGSLKFFAHQRQCAIRELKFKLAKLQESEGKDMKNS 738


>ref|XP_010108863.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis] gi|587933540|gb|EXC20503.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 828

 Score =  582 bits (1500), Expect = e-163
 Identities = 317/539 (58%), Positives = 381/539 (70%), Gaps = 21/539 (3%)
 Frame = -3

Query: 1905 SFRFASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNTTTLDENTCLKDGEEN 1726
            +++  SK+  + +A F+  +ET  S    LD       S +KS   T++     K+ E  
Sbjct: 278  NYQPTSKTFPRTYAGFSGHQETPFSNLVQLDSRKGNSVSEVKSYENTIERKISKKNTEGE 337

Query: 1725 TLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGF 1546
            T+PT+I +      QP   SLY RE DRLLDGLGPRF+DWWM +PLPVDADLLPEVVPGF
Sbjct: 338  TIPTAIILKNDANFQP-SSSLYVREADRLLDGLGPRFIDWWMNKPLPVDADLLPEVVPGF 396

Query: 1545 KPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAK 1366
            +PPFR  PP  RSK+T++E TYLRKLAH LPTHFVLGRNR LQGLAAAILKLWEK  +AK
Sbjct: 397  RPPFRRCPPHTRSKLTDEELTYLRKLAHSLPTHFVLGRNRKLQGLAAAILKLWEKCHIAK 456

Query: 1365 IAVKWGIPNTDNEQMADELKR---LTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERER 1195
            IAVK G+PNT+NEQMA ELK    LTGG LLLRNKF+IILYRGKDFLP  +  LI +RE 
Sbjct: 457  IAVKLGVPNTNNEQMAYELKARICLTGGDLLLRNKFIIILYRGKDFLPDQIAELITKRET 516

Query: 1194 ELQICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQL 1015
            EL+ CQL+EE ARL   E   + DEP ++ S AGTLSEF DIQ E+GD    N E +L  
Sbjct: 517  ELEYCQLYEEHARLVVAEKVFVADEPLKKTSPAGTLSEFHDIQIEYGDSNKGNIEVKLPF 576

Query: 1014 AADIXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLR 835
             A+              L ILN KI+KS KEL KLN+AWKPSE+D D EM+TEEER+C R
Sbjct: 577  EAEKERLESELRKQERKLLILNSKIKKSTKELLKLNTAWKPSERDGDQEMLTEEERECFR 636

Query: 834  KIGLKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGG 655
            KIGLKM S L+LGRRG+FDGVIEGL QHWKHREVAKVITMQ+ F QV++TA SL  E+GG
Sbjct: 637  KIGLKMRSVLVLGRRGIFDGVIEGLRQHWKHREVAKVITMQRYFWQVMYTATSLEAESGG 696

Query: 654  ILISVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQ 475
            +L+SV+KLKEGHAIIIYRGKNYRRP KL++ NLL+KR+AL RSLEMQR+GSLKF AYQR 
Sbjct: 697  LLVSVEKLKEGHAIIIYRGKNYRRPLKLISVNLLTKRKALSRSLEMQRIGSLKFFAYQRH 756

Query: 474  RAISEWKTKL---------------AELQENSQKNMKISAQTDV---RLSDTS*IVNSF 352
            RAIS+ K KL                +L E  Q+  +IS++++     L + S + N F
Sbjct: 757  RAISDLKLKLNLDVFSLSANHSEGILQLAEKGQRLQQISSKSETFNNSLREASLLKNGF 815


>gb|KHG25518.1| hypothetical protein F383_03195 [Gossypium arboreum]
          Length = 737

 Score =  580 bits (1495), Expect = e-162
 Identities = 300/464 (64%), Positives = 362/464 (78%)
 Frame = -3

Query: 1821 HLDLENKVHSSWIKSNTTTLDENTCLKDGEENTLPTSIFMDKKFRTQPIDRSLYEREGDR 1642
            +L  +N    S  KSN +T   +   +D +EN              QP+  SLYERE DR
Sbjct: 279  NLASDNNTTMSPEKSNASTWRRSLNGEDRDENN-------------QPVVGSLYERETDR 325

Query: 1641 LLDGLGPRFVDWWMWEPLPVDADLLPEVVPGFKPPFRLSPPDARSKVTNDEFTYLRKLAH 1462
            LLDGLGPRF+DWWM +PLPVDADLLPEVVPGFKPP RLSPP  R K+T++E T LRKLAH
Sbjct: 326  LLDGLGPRFIDWWMRKPLPVDADLLPEVVPGFKPPTRLSPPKTRPKLTDEELTNLRKLAH 385

Query: 1461 PLPTHFVLGRNRGLQGLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMADELKRLTGGVLL 1282
            PLP HFVLGRNR LQGLA +ILKLWEKSL+AKIA+KWG+ NTDNEQMA+ELK LTGGVLL
Sbjct: 386  PLPFHFVLGRNRNLQGLANSILKLWEKSLIAKIAIKWGVQNTDNEQMANELKDLTGGVLL 445

Query: 1281 LRNKFLIILYRGKDFLPCGVENLIFERERELQICQLHEEGARLKAIETFCLPDEPQEEVS 1102
            LRNKFLII YRGKDFLP GV N + ERE  L+ CQL EEGAR+K  ETF + +E   + S
Sbjct: 446  LRNKFLIIFYRGKDFLPQGVANSVMEREMALRRCQLIEEGARVKVAETFQVANESLAKTS 505

Query: 1101 RAGTLSEFRDIQTEFGDMGMDNREFELQLAADIXXXXXXXXXXXXXLFILNIKIEKSAKE 922
              GTL+EF+DIQT++G +  +N E E+Q+ A               L ILN KIEKSAK+
Sbjct: 506  TVGTLAEFQDIQTKYGVLEKENNELEIQIEAQKENLERELRNQERKLAILNGKIEKSAKK 565

Query: 921  LSKLNSAWKPSEQDPDMEMITEEERQCLRKIGLKMNSNLLLGRRGVFDGVIEGLYQHWKH 742
            L+KLNS+W+ +E D D+E ITEEER+CLRKIGLK++S L+LGRRGVF+GVIEG++QHWKH
Sbjct: 566  LAKLNSSWQTAEPDLDLETITEEERECLRKIGLKLSSCLVLGRRGVFNGVIEGVHQHWKH 625

Query: 741  REVAKVITMQKLFAQVIFTAKSLVVETGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTR 562
            REV KVITMQ+ F +VI+TAK LV E+GGIL+SV+KLKEGHAIIIYRGKNYRRPSKLMT 
Sbjct: 626  REVVKVITMQRAFLRVIYTAKMLVAESGGILVSVEKLKEGHAIIIYRGKNYRRPSKLMTD 685

Query: 561  NLLSKRQALRRSLEMQRLGSLKFVAYQRQRAISEWKTKLAELQE 430
            +LL+KR+AL+RS+E+QR+GSLKF AYQR++AI + K KLA+L+E
Sbjct: 686  HLLTKREALQRSIELQRIGSLKFFAYQRRQAILDLKLKLAKLEE 729


>ref|XP_009357796.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Pyrus x bretschneideri]
          Length = 791

 Score =  577 bits (1487), Expect = e-161
 Identities = 306/489 (62%), Positives = 366/489 (74%), Gaps = 2/489 (0%)
 Frame = -3

Query: 1905 SFRFASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNT--TTLDENTCLKDGE 1732
            +++  SK   K     A  +ET+ S    LDLE    SS  +S T  + +DE    K+ +
Sbjct: 303  NYQLTSKFFPKRRPRSAGCQETSSSDLIQLDLEK---SSIYQSETFESAVDEKLNKKNDK 359

Query: 1731 ENTLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVP 1552
             +  PT IF++     QP   SLYE+E DRLLDGLGPRF+DWWM +PLPVDADLLPEVVP
Sbjct: 360  GD--PTQIFLETNVSCQPTSSSLYEKEADRLLDGLGPRFIDWWMHKPLPVDADLLPEVVP 417

Query: 1551 GFKPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLV 1372
            GFK P R  PP+ RS++T+DE T LRK A  LPTHFV+GRNR LQGLAAAILKLWEKS +
Sbjct: 418  GFKAPIRRCPPNTRSRLTDDELTNLRKSARSLPTHFVVGRNRKLQGLAAAILKLWEKSQI 477

Query: 1371 AKIAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERE 1192
            AKIAVK+G+PNT+NEQMA ELK LTGGVLLLRNKF+I+LYRGKDFLPCGV +L+ +RE E
Sbjct: 478  AKIAVKFGVPNTNNEQMAYELKCLTGGVLLLRNKFIILLYRGKDFLPCGVSDLVAKREIE 537

Query: 1191 LQICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLA 1012
            L   QLHEE ARLKAIETF   D+P       GTLSEF +IQTE+GD+   N++ E++L 
Sbjct: 538  LNRWQLHEEHARLKAIETFSEDDDPLGSTGTVGTLSEFHNIQTEYGDLIRRNKDIEIKLE 597

Query: 1011 ADIXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRK 832
            A+              +FILN KIEKS  +LSKLNS W P+EQD D EMITEEER+C RK
Sbjct: 598  AEKARLGRELRNQERKVFILNRKIEKSTNKLSKLNSQWTPAEQDVDQEMITEEERECFRK 657

Query: 831  IGLKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGI 652
            IGLKM+S L+LGRRGVF+GV EG++QHWKHREV KVITMQKLF QV++TAK L  E+GG+
Sbjct: 658  IGLKMHSCLVLGRRGVFNGVKEGIHQHWKHREVVKVITMQKLFGQVMYTAKFLEAESGGV 717

Query: 651  LISVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQR 472
            L+SVDKLK+GHAIIIYRG+NYRRP K +  NLLSKR+AL RSLEMQR+GSLKF A QRQ+
Sbjct: 718  LVSVDKLKKGHAIIIYRGRNYRRPFKPICGNLLSKRKALHRSLEMQRIGSLKFFASQRQQ 777

Query: 471  AISEWKTKL 445
            A  + K KL
Sbjct: 778  AALDLKLKL 786


>ref|XP_009357794.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Pyrus x bretschneideri]
          Length = 807

 Score =  577 bits (1487), Expect = e-161
 Identities = 306/489 (62%), Positives = 366/489 (74%), Gaps = 2/489 (0%)
 Frame = -3

Query: 1905 SFRFASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNT--TTLDENTCLKDGE 1732
            +++  SK   K     A  +ET+ S    LDLE    SS  +S T  + +DE    K+ +
Sbjct: 303  NYQLTSKFFPKRRPRSAGCQETSSSDLIQLDLEK---SSIYQSETFESAVDEKLNKKNDK 359

Query: 1731 ENTLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVP 1552
             +  PT IF++     QP   SLYE+E DRLLDGLGPRF+DWWM +PLPVDADLLPEVVP
Sbjct: 360  GD--PTQIFLETNVSCQPTSSSLYEKEADRLLDGLGPRFIDWWMHKPLPVDADLLPEVVP 417

Query: 1551 GFKPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLV 1372
            GFK P R  PP+ RS++T+DE T LRK A  LPTHFV+GRNR LQGLAAAILKLWEKS +
Sbjct: 418  GFKAPIRRCPPNTRSRLTDDELTNLRKSARSLPTHFVVGRNRKLQGLAAAILKLWEKSQI 477

Query: 1371 AKIAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERE 1192
            AKIAVK+G+PNT+NEQMA ELK LTGGVLLLRNKF+I+LYRGKDFLPCGV +L+ +RE E
Sbjct: 478  AKIAVKFGVPNTNNEQMAYELKCLTGGVLLLRNKFIILLYRGKDFLPCGVSDLVAKREIE 537

Query: 1191 LQICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLA 1012
            L   QLHEE ARLKAIETF   D+P       GTLSEF +IQTE+GD+   N++ E++L 
Sbjct: 538  LNRWQLHEEHARLKAIETFSEDDDPLGSTGTVGTLSEFHNIQTEYGDLIRRNKDIEIKLE 597

Query: 1011 ADIXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRK 832
            A+              +FILN KIEKS  +LSKLNS W P+EQD D EMITEEER+C RK
Sbjct: 598  AEKARLGRELRNQERKVFILNRKIEKSTNKLSKLNSQWTPAEQDVDQEMITEEERECFRK 657

Query: 831  IGLKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGI 652
            IGLKM+S L+LGRRGVF+GV EG++QHWKHREV KVITMQKLF QV++TAK L  E+GG+
Sbjct: 658  IGLKMHSCLVLGRRGVFNGVKEGIHQHWKHREVVKVITMQKLFGQVMYTAKFLEAESGGV 717

Query: 651  LISVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQR 472
            L+SVDKLK+GHAIIIYRG+NYRRP K +  NLLSKR+AL RSLEMQR+GSLKF A QRQ+
Sbjct: 718  LVSVDKLKKGHAIIIYRGRNYRRPFKPICGNLLSKRKALHRSLEMQRIGSLKFFASQRQQ 777

Query: 471  AISEWKTKL 445
            A  + K KL
Sbjct: 778  AALDLKLKL 786


>ref|XP_012491296.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Gossypium raimondii]
            gi|763775949|gb|KJB43072.1| hypothetical protein
            B456_007G182400 [Gossypium raimondii]
          Length = 734

 Score =  576 bits (1484), Expect = e-161
 Identities = 298/464 (64%), Positives = 358/464 (77%)
 Frame = -3

Query: 1821 HLDLENKVHSSWIKSNTTTLDENTCLKDGEENTLPTSIFMDKKFRTQPIDRSLYEREGDR 1642
            +L  +N    S  KSN +T   +   +D +EN              QP+  SLYERE DR
Sbjct: 276  NLASDNNTTMSQEKSNASTWGRSLNGEDRDENN-------------QPVVGSLYERETDR 322

Query: 1641 LLDGLGPRFVDWWMWEPLPVDADLLPEVVPGFKPPFRLSPPDARSKVTNDEFTYLRKLAH 1462
            LLDGLGPRF+DWWM +PLPVDADLLPEVVPGF+PP RLSPP  R K+T++E T LRKLAH
Sbjct: 323  LLDGLGPRFIDWWMRKPLPVDADLLPEVVPGFRPPTRLSPPKTRPKLTDEELTNLRKLAH 382

Query: 1461 PLPTHFVLGRNRGLQGLAAAILKLWEKSLVAKIAVKWGIPNTDNEQMADELKRLTGGVLL 1282
            PLP HF LGRNR LQGLA AILKLWEKSL+AKIA+KWG  NTDNEQMA+ELK LTGGVLL
Sbjct: 383  PLPFHFALGRNRNLQGLANAILKLWEKSLIAKIAIKWGAQNTDNEQMANELKDLTGGVLL 442

Query: 1281 LRNKFLIILYRGKDFLPCGVENLIFERERELQICQLHEEGARLKAIETFCLPDEPQEEVS 1102
            LRNKFLII YRGKDFLP GV N + ERE  L+ CQL EE AR+K  ETF + +EP  + S
Sbjct: 443  LRNKFLIIFYRGKDFLPQGVANSVMEREMALRRCQLIEEDARVKVAETFQVANEPLAKTS 502

Query: 1101 RAGTLSEFRDIQTEFGDMGMDNREFELQLAADIXXXXXXXXXXXXXLFILNIKIEKSAKE 922
              GTL+EF+DIQT++G +  +N E E+Q+ A               L ILN KIEKSA +
Sbjct: 503  TVGTLAEFQDIQTKYGVLEKENNELEIQIEAQKENLERELRNQERKLAILNGKIEKSATK 562

Query: 921  LSKLNSAWKPSEQDPDMEMITEEERQCLRKIGLKMNSNLLLGRRGVFDGVIEGLYQHWKH 742
            L+KLNS+W+ +E D D+E ITEEER+CLRKIGLK++S L LGRRGVF+GVIEG++QHWKH
Sbjct: 563  LAKLNSSWQTAEPDLDLETITEEERECLRKIGLKLSSCLFLGRRGVFNGVIEGVHQHWKH 622

Query: 741  REVAKVITMQKLFAQVIFTAKSLVVETGGILISVDKLKEGHAIIIYRGKNYRRPSKLMTR 562
            REV KVITMQ+ F +VI+TAK LV E+GGIL+SV+KLKEGHAIIIYRGKNYRRPSKLMT 
Sbjct: 623  REVVKVITMQRAFLRVIYTAKMLVAESGGILVSVEKLKEGHAIIIYRGKNYRRPSKLMTD 682

Query: 561  NLLSKRQALRRSLEMQRLGSLKFVAYQRQRAISEWKTKLAELQE 430
            +LL+KR+AL+RS+E+QR+GSLKF AYQR++AI + K KLA+L+E
Sbjct: 683  HLLTKREALQRSIELQRIGSLKFFAYQRRQAILDLKLKLAKLEE 726


>ref|XP_008381487.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Malus domestica]
          Length = 836

 Score =  572 bits (1475), Expect = e-160
 Identities = 305/489 (62%), Positives = 362/489 (74%), Gaps = 2/489 (0%)
 Frame = -3

Query: 1905 SFRFASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNT--TTLDENTCLKDGE 1732
            +++  SK   K     A  +ET+ S    LDLE    SS  +S T  + +DE    K+ +
Sbjct: 332  NYQSTSKFFPKRXPRSAGCQETSSSDLIQLDLEK---SSIYQSETFESAVDEKLNKKNDK 388

Query: 1731 ENTLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVP 1552
             +  PT IF++     QP  RSLYE+E DRLLDGLGPRF+DWWM +PLPVDADLLPEVVP
Sbjct: 389  XD--PTQIFLETNVXCQPTSRSLYEKEADRLLDGLGPRFIDWWMHKPLPVDADLLPEVVP 446

Query: 1551 GFKPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLV 1372
            GFK P R  PP+ RS +T+DE T LRK A  LPTHFVLGRNR LQGLAAAILKLWEKS +
Sbjct: 447  GFKAPIRXCPPNTRSXLTDDELTNLRKSARSLPTHFVLGRNRKLQGLAAAILKLWEKSQI 506

Query: 1371 AKIAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERE 1192
            AKIAVK+G+PNT+NEQMA ELK LTGGVLLLRNKF+I+LYRGKDFLPCGV +L+ +RE E
Sbjct: 507  AKIAVKFGVPNTNNEQMAYELKCLTGGVLLLRNKFIILLYRGKDFLPCGVSDLVAKREIE 566

Query: 1191 LQICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLA 1012
            L   QLHEE ARLKAIE F   DEP       GTLSEF +IQTE+GD+   N++ E++L 
Sbjct: 567  LNRWQLHEEHARLKAIEXFSEDDEPLGSTGTVGTLSEFHNIQTEYGDLIRRNKDIEIKLE 626

Query: 1011 ADIXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRK 832
            A+               FILN KIEKS  +LSKLN  W P+EQD D EM+TEEER+C RK
Sbjct: 627  AEKARLGRELRNQEHKAFILNRKIEKSTNKLSKLNXQWTPAEQDVDQEMMTEEERECFRK 686

Query: 831  IGLKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGI 652
            IGL M+S L+LGRRGVF+GV EG++QHWKHREV KVITMQKLF QV++TAK L  E+GG+
Sbjct: 687  IGLXMHSCLVLGRRGVFNGVKEGIHQHWKHREVVKVITMQKLFGQVMYTAKLLEAESGGV 746

Query: 651  LISVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQR 472
            L+SVDKLK+GHAIIIYRG+NYRRP K +  NLLSKR+AL RSLEMQR+GSLKF A QRQ+
Sbjct: 747  LVSVDKLKKGHAIIIYRGRNYRRPFKPICGNLLSKRKALHRSLEMQRIGSLKFFASQRQQ 806

Query: 471  AISEWKTKL 445
            A  + K KL
Sbjct: 807  AALDLKLKL 815


>ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica]
            gi|462413463|gb|EMJ18512.1| hypothetical protein
            PRUPE_ppa016241mg [Prunus persica]
          Length = 809

 Score =  568 bits (1464), Expect = e-159
 Identities = 304/488 (62%), Positives = 361/488 (73%)
 Frame = -3

Query: 1905 SFRFASKSSVKMHADFADGRETTLSKSTHLDLENKVHSSWIKSNTTTLDENTCLKDGEEN 1726
            +++ +SK   KM    AD +ET  S     DLE    S   KS  + +DE    KD EE+
Sbjct: 325  NYQSSSKFFPKMRPCSADRQETLSSDHMQPDLEEN-SSYQYKSFESPVDEKMSRKDAEED 383

Query: 1725 TLPTSIFMDKKFRTQPIDRSLYEREGDRLLDGLGPRFVDWWMWEPLPVDADLLPEVVPGF 1546
             + +  F +     QP  RSLYE+E DRLLDGLGPRF+DWWM +PLPVDADLLPEVVPGF
Sbjct: 384  CIQSGTFQETSMSCQPTSRSLYEKEADRLLDGLGPRFIDWWMHKPLPVDADLLPEVVPGF 443

Query: 1545 KPPFRLSPPDARSKVTNDEFTYLRKLAHPLPTHFVLGRNRGLQGLAAAILKLWEKSLVAK 1366
            K P R  PP  RSK+T+DE T+LRK A  LPTHFVLGRNR LQGLAAAILKLWEKSL+AK
Sbjct: 444  KAPIRRCPPHTRSKLTDDELTFLRKFARSLPTHFVLGRNRKLQGLAAAILKLWEKSLIAK 503

Query: 1365 IAVKWGIPNTDNEQMADELKRLTGGVLLLRNKFLIILYRGKDFLPCGVENLIFERERELQ 1186
            IAVK+G+PNT+NEQMA EL+     VL+LRNKF+I+LYRGKDFLPCGV +L+ +RE EL 
Sbjct: 504  IAVKFGVPNTNNEQMAYELR---ARVLILRNKFIILLYRGKDFLPCGVADLVAKREVELT 560

Query: 1185 ICQLHEEGARLKAIETFCLPDEPQEEVSRAGTLSEFRDIQTEFGDMGMDNREFELQLAAD 1006
              QL+EE AR KAIETFC   EP   V+  GTLSEF+DIQTE+G++  +N+  E++L A+
Sbjct: 561  RWQLYEEHARQKAIETFCESGEPL--VNTVGTLSEFQDIQTEYGELIKENKNVEIKLEAE 618

Query: 1005 IXXXXXXXXXXXXXLFILNIKIEKSAKELSKLNSAWKPSEQDPDMEMITEEERQCLRKIG 826
                           FILN KIEKS  ELSKLNS   P+EQD D EM+TEEE++CLR +G
Sbjct: 619  KEQLERELRNQERKFFILNKKIEKSTNELSKLNSQRTPAEQDVDQEMMTEEEKECLRTVG 678

Query: 825  LKMNSNLLLGRRGVFDGVIEGLYQHWKHREVAKVITMQKLFAQVIFTAKSLVVETGGILI 646
            LKM+S L+LGRRGVF+GV+EGL+QHWKHREV KVITMQKLF QV+ TAK L  E+GGIL+
Sbjct: 679  LKMHSCLVLGRRGVFNGVMEGLHQHWKHREVVKVITMQKLFRQVMHTAKLLEAESGGILV 738

Query: 645  SVDKLKEGHAIIIYRGKNYRRPSKLMTRNLLSKRQALRRSLEMQRLGSLKFVAYQRQRAI 466
            SVDKLKEGHAIIIYRGKNYRRP      NLLSKR+AL RSLEMQR+GSLKF A QRQ+A 
Sbjct: 739  SVDKLKEGHAIIIYRGKNYRRPLMPTGGNLLSKRKALHRSLEMQRIGSLKFFASQRQQAT 798

Query: 465  SEWKTKLA 442
             + K KL+
Sbjct: 799  LDLKLKLS 806