BLASTX nr result
ID: Zanthoxylum22_contig00010908
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00010908
(1215 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006480779.1| PREDICTED: THO complex subunit 4-like isofor... 294 1e-76
ref|XP_006429036.1| hypothetical protein CICLE_v10012530mg [Citr... 281 6e-73
ref|XP_006480780.1| PREDICTED: THO complex subunit 4-like isofor... 281 1e-72
ref|XP_007027070.1| RNA-binding family protein [Theobroma cacao]... 239 4e-60
ref|XP_010260105.1| PREDICTED: THO complex subunit 4A [Nelumbo n... 237 1e-59
ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vin... 232 5e-58
ref|XP_010253243.1| PREDICTED: THO complex subunit 4A-like isofo... 230 2e-57
ref|XP_011011762.1| PREDICTED: THO complex subunit 4B-like [Popu... 229 3e-57
ref|XP_002531375.1| RNA and export factor binding protein, putat... 229 3e-57
ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Popu... 229 5e-57
ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Popu... 226 4e-56
gb|KHG13055.1| THO complex subunit 4 [Gossypium arboreum] 222 6e-55
ref|XP_010558316.1| PREDICTED: THO complex subunit 4B-like [Tare... 221 7e-55
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 221 7e-55
ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Goss... 221 1e-54
ref|XP_010092777.1| RNA and export factor-binding protein 2 [Mor... 221 1e-54
ref|XP_010043580.1| PREDICTED: THO complex subunit 4A [Eucalyptu... 220 2e-54
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor... 219 4e-54
ref|XP_011624054.1| PREDICTED: THO complex subunit 4A isoform X2... 218 8e-54
ref|XP_007016490.1| RNA-binding family protein [Theobroma cacao]... 218 8e-54
>ref|XP_006480779.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 287
Score = 294 bits (752), Expect = 1e-76
Identities = 170/278 (61%), Positives = 184/278 (66%), Gaps = 13/278 (4%)
Frame = -2
Query: 1181 ILKP*LNLTPTHNLYLSVRVSSKMKSALDMSLDDIIXXXXXXXXXXXXXXXXG--LGPAR 1008
IL+ L L + NL+ RVSS+M SALDMSLDDII G LGPAR
Sbjct: 9 ILEALLVLAISRNLHSPFRVSSRMTSALDMSLDDIIKSNKRSSSRWRGGGGRGSGLGPAR 68
Query: 1007 RTFKRSINLTAPYSKPVQAPQATWQHSMFINXXXXXXXXXXXXGETGTKLYISNLDYGVS 828
TFKRS+N TAPYSKPVQAPQATW +M N E+GTKLYISNL+YGVS
Sbjct: 69 HTFKRSVNRTAPYSKPVQAPQATWPQNMIFNGAVAAAAARSSSIESGTKLYISNLEYGVS 128
Query: 827 NEDINELFSEVGDLKRYSVHFDRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKI 648
NEDI ELFSEVG+LKR SVHFDRSGRSKGTAE V TRR +A+AAVKRYNNVQLDGKPMKI
Sbjct: 129 NEDIKELFSEVGELKRCSVHFDRSGRSKGTAEVVLTRRADAIAAVKRYNNVQLDGKPMKI 188
Query: 647 EIIGTNIGTPAAVRPATNGMYGNQNGASRSRLNRGDAI-----------XXXXXXXXXXX 501
EIIGTNIG PAAV P TN MYGN+ G SRS L G AI
Sbjct: 189 EIIGTNIGPPAAVLPITNVMYGNEIGTSRSHLRMGGAIPIERPRHGRGGLGGRGGRGGAR 248
Query: 500 XXXXXXXXXGAKPNLSLEDLDADLKKYHEEAKQSDGMV 387
GAKPNLS+EDLDADL+KYH EAKQSDGMV
Sbjct: 249 GGRGRGRGQGAKPNLSVEDLDADLEKYHIEAKQSDGMV 286
>ref|XP_006429036.1| hypothetical protein CICLE_v10012530mg [Citrus clementina]
gi|567872895|ref|XP_006429037.1| hypothetical protein
CICLE_v10012530mg [Citrus clementina]
gi|567872897|ref|XP_006429038.1| hypothetical protein
CICLE_v10012530mg [Citrus clementina]
gi|557531093|gb|ESR42276.1| hypothetical protein
CICLE_v10012530mg [Citrus clementina]
gi|557531094|gb|ESR42277.1| hypothetical protein
CICLE_v10012530mg [Citrus clementina]
gi|557531095|gb|ESR42278.1| hypothetical protein
CICLE_v10012530mg [Citrus clementina]
Length = 256
Score = 281 bits (720), Expect = 6e-73
Identities = 159/255 (62%), Positives = 169/255 (66%), Gaps = 13/255 (5%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXG--LGPARRTFKRSINLTAPYSKPVQAPQAT 939
M SALDMSLDDII G LGPAR TFKRS+N TAPYSKPVQAPQAT
Sbjct: 1 MTSALDMSLDDIIKSNKRSSSRGRGGGGRGSGLGPARHTFKRSVNRTAPYSKPVQAPQAT 60
Query: 938 WQHSMFINXXXXXXXXXXXXGETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVHFDR 759
W +M N E+GTKLYISNL+YGVSNEDI ELFSEVG+LKR SVHFDR
Sbjct: 61 WPQNMIFNGAVAAAAARSSSIESGTKLYISNLEYGVSNEDIKELFSEVGELKRCSVHFDR 120
Query: 758 SGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGMYGN 579
SGRSKGTAE V TRR +A+AAVKRYNNVQLDGKPMKIEIIGTNIG PAAV P TN MYGN
Sbjct: 121 SGRSKGTAEVVLTRRADAIAAVKRYNNVQLDGKPMKIEIIGTNIGPPAAVLPITNVMYGN 180
Query: 578 QNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXG-----------AKPNLSLEDLDAD 432
+ G SRS L G AI AKPNLS+EDLDAD
Sbjct: 181 EIGTSRSHLRMGGAIPIERPRRGRGGLGGRGGRGGARGGRGRGRGQGAKPNLSVEDLDAD 240
Query: 431 LKKYHEEAKQSDGMV 387
L+KYH EAKQSDGMV
Sbjct: 241 LEKYHTEAKQSDGMV 255
>ref|XP_006480780.1| PREDICTED: THO complex subunit 4-like isoform X2 [Citrus sinensis]
Length = 256
Score = 281 bits (718), Expect = 1e-72
Identities = 160/255 (62%), Positives = 170/255 (66%), Gaps = 13/255 (5%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXG--LGPARRTFKRSINLTAPYSKPVQAPQAT 939
M SALDMSLDDII G LGPAR TFKRS+N TAPYSKPVQAPQAT
Sbjct: 1 MTSALDMSLDDIIKSNKRSSSRWRGGGGRGSGLGPARHTFKRSVNRTAPYSKPVQAPQAT 60
Query: 938 WQHSMFINXXXXXXXXXXXXGETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVHFDR 759
W +M N E+GTKLYISNL+YGVSNEDI ELFSEVG+LKR SVHFDR
Sbjct: 61 WPQNMIFNGAVAAAAARSSSIESGTKLYISNLEYGVSNEDIKELFSEVGELKRCSVHFDR 120
Query: 758 SGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGMYGN 579
SGRSKGTAE V TRR +A+AAVKRYNNVQLDGKPMKIEIIGTNIG PAAV P TN MYGN
Sbjct: 121 SGRSKGTAEVVLTRRADAIAAVKRYNNVQLDGKPMKIEIIGTNIGPPAAVLPITNVMYGN 180
Query: 578 QNGASRSRLNRGDAI-----------XXXXXXXXXXXXXXXXXXXXGAKPNLSLEDLDAD 432
+ G SRS L G AI GAKPNLS+EDLDAD
Sbjct: 181 EIGTSRSHLRMGGAIPIERPRHGRGGLGGRGGRGGARGGRGRGRGQGAKPNLSVEDLDAD 240
Query: 431 LKKYHEEAKQSDGMV 387
L+KYH EAKQSDGMV
Sbjct: 241 LEKYHIEAKQSDGMV 255
>ref|XP_007027070.1| RNA-binding family protein [Theobroma cacao]
gi|508715675|gb|EOY07572.1| RNA-binding family protein
[Theobroma cacao]
Length = 240
Score = 239 bits (609), Expect = 4e-60
Identities = 133/242 (54%), Positives = 152/242 (62%), Gaps = 3/242 (1%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXG-LGPARRTFKRSINLTAPYSKPVQAPQATW 936
M + LDMSLDD+I GP+RR R+ N TAPYSKPVQAP TW
Sbjct: 1 MTNPLDMSLDDLIKSNRKSGLTRTRPPLNSGNGPSRRFPNRAANRTAPYSKPVQAPDTTW 60
Query: 935 QHSMFINXXXXXXXXXXXXG--ETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVHFD 762
QH MF++ ETGTKLYISNLDYGVSNEDI ELFSEVGD+KRYSVH+D
Sbjct: 61 QHDMFVDDGAGFPSAAGRASSIETGTKLYISNLDYGVSNEDIKELFSEVGDMKRYSVHYD 120
Query: 761 RSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGMYG 582
RSGRSKGTAE VF+RRT+A A KRYN VQLDGKPMKIEI+GTN+ TP A+ PATNG +
Sbjct: 121 RSGRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGKPMKIEIVGTNVATPVALPPATNGKFA 180
Query: 581 NQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAKPNLSLEDLDADLKKYHEEAKQ 402
N NG RS RG G K +S EDLDADL+ YH+EA Q
Sbjct: 181 NPNGVPRSGQGRGSFSGRSRGPGRGARRGRGQGRGQGEK--VSAEDLDADLENYHKEAMQ 238
Query: 401 SD 396
++
Sbjct: 239 TE 240
>ref|XP_010260105.1| PREDICTED: THO complex subunit 4A [Nelumbo nucifera]
Length = 244
Score = 237 bits (605), Expect = 1e-59
Identities = 135/243 (55%), Positives = 154/243 (63%), Gaps = 6/243 (2%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXGLGP--ARRTFKRSINLTAPYS--KPVQAPQ 945
M SALDM+L+D+I G GP +RR R N TAPYS KPVQAP
Sbjct: 1 MSSALDMTLEDLIKNNKKSGGGNFRGRGRGSGPGPSRRFPNRGANRTAPYSTGKPVQAPD 60
Query: 944 ATWQHSMFINXXXXXXXXXXXXG--ETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSV 771
+ WQH MF + ETGTKLYISNL+YGVSNEDI ELFSEVGDLKRY+V
Sbjct: 61 SAWQHDMFTDQAAAYPAQAARTSAIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYTV 120
Query: 770 HFDRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNG 591
H+DRSGRSKGTAE VF+RR +A+AAVKRYNNVQLDGKPMKIE++GTNI TP AV PA NG
Sbjct: 121 HYDRSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEVVGTNIATPVAVPPAANG 180
Query: 590 MYGNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAKPNLSLEDLDADLKKYHEE 411
+GN NG RS RG A+ + +S EDLDADL+KYH E
Sbjct: 181 GFGNPNGVPRSGQGRGGAMGRSRGGGGRGFGRGRGRRRDRGE-QISAEDLDADLEKYHSE 239
Query: 410 AKQ 402
A Q
Sbjct: 240 AMQ 242
>ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 232 bits (591), Expect = 5e-58
Identities = 134/242 (55%), Positives = 148/242 (61%), Gaps = 5/242 (2%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXG---LGPARRTFKRSINLTAPYSKPVQAPQA 942
M +ALDMSLDD+I GPARR R N PYS +AP+
Sbjct: 1 MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVS-KAPET 59
Query: 941 TWQHSMFINXXXXXXXXXXXXG--ETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVH 768
TWQH MF + ETGTKLYISNLDYGVSNEDI ELFSEVGDLKRYS+H
Sbjct: 60 TWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119
Query: 767 FDRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGM 588
+DRSGRSKGTAE VF+RR +AVAAVKRYNNVQLDGKPMKIEI+GTNI TPAAV P TNG
Sbjct: 120 YDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTNGT 179
Query: 587 YGNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAKPNLSLEDLDADLKKYHEEA 408
+GN NG RS R + G +S EDLDADL+KYH EA
Sbjct: 180 FGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEA 239
Query: 407 KQ 402
Q
Sbjct: 240 MQ 241
>ref|XP_010253243.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Nelumbo nucifera]
Length = 241
Score = 230 bits (586), Expect = 2e-57
Identities = 133/243 (54%), Positives = 150/243 (61%), Gaps = 6/243 (2%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXGLGP--ARRTFKRSINLTAPYS--KPVQAPQ 945
M S+LDMSLDD+I G GP ARR R N T PYS K VQAP
Sbjct: 1 MSSSLDMSLDDLIKNNKKSGGSNFRGRGRGSGPGPARRAPNRGANRTTPYSMGKSVQAPD 60
Query: 944 ATWQHSMFINXXXXXXXXXXXXG--ETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSV 771
+ WQH MF + ETGTKLYISNLDYGVSN+DI ELFSEVGDLKRY++
Sbjct: 61 SAWQHDMFTDQAAAYPAQASRASAIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRYTI 120
Query: 770 HFDRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNG 591
H+DRSGRSKGTAE VF+RR +A+AAVKRYNNVQLDGKPMKIEI+GTN+ TPA ATNG
Sbjct: 121 HYDRSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEIVGTNVTTPAVAPAATNG 180
Query: 590 MYGNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAKPNLSLEDLDADLKKYHEE 411
+GN N RS RG AI G ++ EDLDADL+KYH E
Sbjct: 181 KFGNPNSVPRSGQGRGGAI----GRPRGRGFGRGRGRGRGRAEQITAEDLDADLEKYHSE 236
Query: 410 AKQ 402
A Q
Sbjct: 237 AMQ 239
>ref|XP_011011762.1| PREDICTED: THO complex subunit 4B-like [Populus euphratica]
Length = 243
Score = 229 bits (585), Expect = 3e-57
Identities = 131/240 (54%), Positives = 152/240 (63%), Gaps = 3/240 (1%)
Frame = -2
Query: 1106 SALDMSLDDIIXXXXXXXXXXXXXXXXG-LGPARRTFKRSINLTAPYSKP-VQAPQATWQ 933
+ALDMSLDDII G GP+RR R+ N+T PYSKP VQAP+ +WQ
Sbjct: 4 TALDMSLDDIIENNRKSSNSRGRPRSSGGPGPSRRFSNRAGNITTPYSKPQVQAPETSWQ 63
Query: 932 HSMFINXXXXXXXXXXXXGETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVHFDRSG 753
H MF + ETGTKLYISNLD+GVS EDI ELFSE+GDLKRYSVH+DRSG
Sbjct: 64 HDMFTDSPASAYPARASSIETGTKLYISNLDFGVSTEDIKELFSEIGDLKRYSVHYDRSG 123
Query: 752 RSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGMYGNQN 573
RS+GTAE VF RR +AV+AVKRYNNVQLDGKPMKIEI+GTNI T AV P TNGMY NQN
Sbjct: 124 RSEGTAEIVFARREDAVSAVKRYNNVQLDGKPMKIEIVGTNITTRPAVLPPTNGMYRNQN 183
Query: 572 GASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAK-PNLSLEDLDADLKKYHEEAKQSD 396
A+ R ++G + +S EDLDADL+KYH E Q +
Sbjct: 184 IAAPRRSSQGRGGTTGRPRGGGHGVRRGGRGRGRGRGEKISAEDLDADLEKYHSEVMQEN 243
>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor binding
protein, putative [Ricinus communis]
Length = 247
Score = 229 bits (585), Expect = 3e-57
Identities = 134/249 (53%), Positives = 153/249 (61%), Gaps = 10/249 (4%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXGLGPA--RRTFKRSINLTAPYSKPVQAPQAT 939
M SALDMSLDDII GP RR R N APY+ +AP++T
Sbjct: 1 MSSALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFNNRGTNRAAPYAA-AKAPEST 59
Query: 938 WQHSMFINXXXXXXXXXXXXG-------ETGTKLYISNLDYGVSNEDINELFSEVGDLKR 780
WQH MF + G ETGTKLYISNL+YGVSNEDI ELFSEVGDLKR
Sbjct: 60 WQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGDLKR 119
Query: 779 YSVHFDRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPA 600
YS+H+DRSGRSKGTAE VF+RRT+A+AAVKRYNNVQLDGKPMKIEI+GTNI TPAA PA
Sbjct: 120 YSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAAT-PA 178
Query: 599 TNGMYGNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAK-PNLSLEDLDADLKK 423
NG +GN NGA R RG + + +S EDLDADL+K
Sbjct: 179 ANGNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLEK 238
Query: 422 YHEEAKQSD 396
YH EA Q++
Sbjct: 239 YHSEAMQTN 247
>ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321275|gb|ERP51752.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 244
Score = 229 bits (583), Expect = 5e-57
Identities = 134/242 (55%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Frame = -2
Query: 1106 SALDMSLDDIIXXXXXXXXXXXXXXXXG-LGPARRTFKRSINLTAPYSKP-VQAPQATWQ 933
+ALDMSLDDII G GP+RR R+ N+T PYSKP VQAP+ +WQ
Sbjct: 4 TALDMSLDDIIENNRKSSNSRGRPRSSGGPGPSRRFSNRAGNITTPYSKPQVQAPETSWQ 63
Query: 932 HSMFINXXXXXXXXXXXXG--ETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVHFDR 759
H MF + ETGTKLYISNLD+GVS EDI ELFSE+GDLKRYSVH+DR
Sbjct: 64 HDMFTDNPVSASAYPARASSIETGTKLYISNLDFGVSTEDIKELFSEIGDLKRYSVHYDR 123
Query: 758 SGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGMYGN 579
SGRS+GTAE VF RR +AV+AVKRYNNVQLDGKPMKIEI+GTNI T AV P+TNGMY N
Sbjct: 124 SGRSEGTAEIVFARREDAVSAVKRYNNVQLDGKPMKIEIVGTNIATRPAVPPSTNGMYRN 183
Query: 578 QN-GASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAKPNLSLEDLDADLKKYHEEAKQ 402
QN A RS RG + +S EDLDADL+KYH EA Q
Sbjct: 184 QNIAAPRSSQGRGGTTGRPRGGGHGVRRGGRGRGRGRGE-KISAEDLDADLEKYHSEAMQ 242
Query: 401 SD 396
+
Sbjct: 243 EN 244
>ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321276|gb|ERP51753.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 245
Score = 226 bits (575), Expect = 4e-56
Identities = 133/242 (54%), Positives = 151/242 (62%), Gaps = 5/242 (2%)
Frame = -2
Query: 1106 SALDMSLDDIIXXXXXXXXXXXXXXXXG-LGPARRTFKRSINLTAPYSKP-VQAPQATWQ 933
+ALDMSLDDII G GP+RR R+ N+T PYSKP VQAP+ +WQ
Sbjct: 4 TALDMSLDDIIENNRKSSNSRGRPRSSGGPGPSRRFSNRAGNITTPYSKPQVQAPETSWQ 63
Query: 932 HSMFINXXXXXXXXXXXXG--ETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVHFDR 759
H MF + ETGTKLYISNLD+GVS EDI ELFSE+GDLKRYSVH+DR
Sbjct: 64 HDMFTDNPVSASAYPARASSIETGTKLYISNLDFGVSTEDIKELFSEIGDLKRYSVHYDR 123
Query: 758 SGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGMYGN 579
SGRS+GTAE VF RR +AV+AVKRYNNVQLDGKPMKIEI+GTNI T AV P+TNGMY N
Sbjct: 124 SGRSEGTAEIVFARREDAVSAVKRYNNVQLDGKPMKIEIVGTNIATRPAVPPSTNGMYRN 183
Query: 578 QN-GASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAKPNLSLEDLDADLKKYHEEAKQ 402
QN A RS G +S EDLDADL+KYH EA Q
Sbjct: 184 QNIAAPRSSSQGRGGTTGRPRGGGHGVRRGGRGRGRGRGEKISAEDLDADLEKYHSEAMQ 243
Query: 401 SD 396
+
Sbjct: 244 EN 245
>gb|KHG13055.1| THO complex subunit 4 [Gossypium arboreum]
Length = 241
Score = 222 bits (565), Expect = 6e-55
Identities = 128/243 (52%), Positives = 150/243 (61%), Gaps = 4/243 (1%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXG--LGPARRTFKRSINLTAPYSKPVQAPQAT 939
M SAL+MSLDD+I G GPARR R N +APY+ +AP+ T
Sbjct: 1 MSSALEMSLDDLIKRSRKSGSGNSRGRGRGSTAGPARRIPNRRANRSAPYTA-AKAPETT 59
Query: 938 WQHSMFINXXXXXXXXXXXXG--ETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVHF 765
WQH M+ + ETGTKLYISNLDYGVSN+DI ELFSEVGDLKRY +H+
Sbjct: 60 WQHDMYSDKGAALQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRYGIHY 119
Query: 764 DRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGMY 585
DRSGRSKGTAE VF+RRT+A+AAVKRYNNVQLDGKP+KIEI+GTNI TP A A NG +
Sbjct: 120 DRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPIKIEIVGTNIATPTA-PSAANGTF 178
Query: 584 GNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAKPNLSLEDLDADLKKYHEEAK 405
G+ NGA R RG G +S EDLDADL+KYH EA
Sbjct: 179 GSSNGAPRGGQGRGGGFGRQRGGAGGRGFGRGRGQGKGRGEKVSAEDLDADLEKYHSEAM 238
Query: 404 QSD 396
Q++
Sbjct: 239 QTN 241
>ref|XP_010558316.1| PREDICTED: THO complex subunit 4B-like [Tarenaya hassleriana]
Length = 256
Score = 221 bits (564), Expect = 7e-55
Identities = 127/254 (50%), Positives = 148/254 (58%), Gaps = 14/254 (5%)
Frame = -2
Query: 1112 MKSALDMSLDDII--------XXXXXXXXXXXXXXXXGLGPARRTFKRSINLTAPYSKPV 957
M SALDMSLDDII G GPARR R N APYS+PV
Sbjct: 1 MSSALDMSLDDIIKSNRKPAGSRGGRGGGEGVGRGSGGPGPARRFSNRIGNRAAPYSRPV 60
Query: 956 QAPQATWQHSMF------INXXXXXXXXXXXXGETGTKLYISNLDYGVSNEDINELFSEV 795
QAP + WQH MF ETG+KLYISNLDYGVSNEDI ELF+EV
Sbjct: 61 QAPDSAWQHDMFAADTAMTAGFGARPTGGASSIETGSKLYISNLDYGVSNEDIKELFAEV 120
Query: 794 GDLKRYSVHFDRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPA 615
GD+KRY +H+DRSGRSKGTAE VF+RR +A+AAVKRYNNVQLDGKPMKIEI+GTN+ PA
Sbjct: 121 GDMKRYGIHYDRSGRSKGTAEVVFSRRVDAMAAVKRYNNVQLDGKPMKIEIVGTNLSVPA 180
Query: 614 AVRPATNGMYGNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAKPNLSLEDLDA 435
+NGM+GN +G R RG + G +S EDLDA
Sbjct: 181 PPPLPSNGMFGNISGVPRRGRGRGGFVGRPRGGVGGGRGGRGRGRGRGRDEKISAEDLDA 240
Query: 434 DLKKYHEEAKQSDG 393
DL YH+ A +++G
Sbjct: 241 DLDNYHKGAMETEG 254
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 221 bits (564), Expect = 7e-55
Identities = 132/245 (53%), Positives = 149/245 (60%), Gaps = 7/245 (2%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXGLGP--ARRTFKRSINLTAPYSKPVQAPQAT 939
M SALDMSLDDII G GP ARR R N APY+ +AP+ T
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIPNRGANRVAPYTT-AKAPETT 59
Query: 938 WQHSMF---INXXXXXXXXXXXXGETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVH 768
WQH MF ++ ETGTKLYISNLDYGVSNEDI ELFSEVGDLKRYS+H
Sbjct: 60 WQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119
Query: 767 FDRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGM 588
+DRSGRSKGTAE V++RR +AVAAVKRYNNVQLDGKPMKIEI+GTNI T A PA N
Sbjct: 120 YDRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNIATRTAA-PAANVN 178
Query: 587 YGNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAKPN--LSLEDLDADLKKYHE 414
+GN NG R RG A G + N +S EDLDADL KY+
Sbjct: 179 FGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLDKYYS 238
Query: 413 EAKQS 399
EA ++
Sbjct: 239 EASEA 243
>ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Gossypium raimondii]
gi|763741358|gb|KJB08857.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741359|gb|KJB08858.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741360|gb|KJB08859.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741362|gb|KJB08861.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741363|gb|KJB08862.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
Length = 241
Score = 221 bits (563), Expect = 1e-54
Identities = 128/243 (52%), Positives = 149/243 (61%), Gaps = 4/243 (1%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXG--LGPARRTFKRSINLTAPYSKPVQAPQAT 939
M SAL+MSLDD+I G GPARR R N +APY+ +AP+
Sbjct: 1 MSSALEMSLDDLIKRSRKSGSGNSRGRGRGSTAGPARRIPNRRANRSAPYTA-AKAPETM 59
Query: 938 WQHSMFINXXXXXXXXXXXXG--ETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVHF 765
WQH M+ + ETGTKLYISNLDYGVSN+DI ELFSEVGDLKRY +H+
Sbjct: 60 WQHDMYSDKGSALQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRYGIHY 119
Query: 764 DRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGMY 585
DRSGRSKGTAE VF+RRT+A+AAVKRYNNVQLDGKPMKIEI+GTNI TP A A NG +
Sbjct: 120 DRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNIATPTA-PSAANGTF 178
Query: 584 GNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAKPNLSLEDLDADLKKYHEEAK 405
G+ NGA R RG G +S EDLDADL+KYH EA
Sbjct: 179 GSSNGAPRGGQGRGGGFGRQRGGAGGRGFGRGRGQGKGRGEKVSAEDLDADLEKYHSEAM 238
Query: 404 QSD 396
Q++
Sbjct: 239 QTN 241
>ref|XP_010092777.1| RNA and export factor-binding protein 2 [Morus notabilis]
gi|587862438|gb|EXB52242.1| RNA and export factor-binding
protein 2 [Morus notabilis]
Length = 248
Score = 221 bits (562), Expect = 1e-54
Identities = 125/248 (50%), Positives = 146/248 (58%), Gaps = 9/248 (3%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXGLG---PARRTFKRSINLTAPYSKPVQAPQA 942
M L MSLDDII G PARR R+ N APY+ +AP+
Sbjct: 1 MSDPLSMSLDDIIKTNKKTGSGNPRGRGRLSGGPGPARRVPNRAPNRAAPYAAAPKAPET 60
Query: 941 TWQHSMFINXXXXXXXXXXXXG--ETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVH 768
TWQH M+++ +TGTKLYISNL+YGVSNEDI ELFSEVGDLKRY++H
Sbjct: 61 TWQHDMYMDQGTAFAAQAGRASAIQTGTKLYISNLEYGVSNEDIKELFSEVGDLKRYAIH 120
Query: 767 FDRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGM 588
+DRSGRSKGTAE VF+RR +AVAAVKRYNNVQLDGKPMKIEI+GTN+ TPAA P NG
Sbjct: 121 YDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNVATPAAPPPPANGS 180
Query: 587 YGNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXG----AKPNLSLEDLDADLKKY 420
+GN NG R RG G +S +DLDADL+KY
Sbjct: 181 FGNSNGLPRGGQGRGGGAFGRPRGGGGGGRGPRRGRGRGQGRGTGEKISADDLDADLEKY 240
Query: 419 HEEAKQSD 396
H EA Q +
Sbjct: 241 HAEAMQEN 248
>ref|XP_010043580.1| PREDICTED: THO complex subunit 4A [Eucalyptus grandis]
gi|629121108|gb|KCW85598.1| hypothetical protein
EUGRSUZ_B02389 [Eucalyptus grandis]
gi|629121109|gb|KCW85599.1| hypothetical protein
EUGRSUZ_B02389 [Eucalyptus grandis]
gi|629121110|gb|KCW85600.1| hypothetical protein
EUGRSUZ_B02389 [Eucalyptus grandis]
Length = 252
Score = 220 bits (560), Expect = 2e-54
Identities = 131/253 (51%), Positives = 150/253 (59%), Gaps = 15/253 (5%)
Frame = -2
Query: 1112 MKSALDMSLDDII----------XXXXXXXXXXXXXXXXGLGPARRTFKRSINLTAPYSK 963
M SALDMSLDDII G GP RR R+ PY+
Sbjct: 1 MSSALDMSLDDIIKSNKKSGSGAPRSGGGRGRGGGGAASGPGPTRRPPNRAAARANPYAA 60
Query: 962 PVQAPQATWQHSMFIN--XXXXXXXXXXXXGETGTKLYISNLDYGVSNEDINELFSEVGD 789
P +AP+ TWQH MF + ETGTKLYISNLDYGVSNEDI ELFSEVGD
Sbjct: 61 P-KAPETTWQHDMFADQGLTFQGQPGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGD 119
Query: 788 LKRYSVHFDRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAV 609
LKR++VH+DRSGRSKGTAE VF+RRT+A+AAVKRYNNVQLDGKPMKIEI+GTNI TPAA
Sbjct: 120 LKRHAVHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAAT 179
Query: 608 RPATNGMYGNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAK---PNLSLEDLD 438
+NG +GN NG R RG AI + +S EDLD
Sbjct: 180 PVISNGSFGNLNGFPRGGQARGGAIGRPRGGASGSGRRPAARGRGRGRGRSEKVSAEDLD 239
Query: 437 ADLKKYHEEAKQS 399
ADL+KYH EA ++
Sbjct: 240 ADLEKYHSEAMET 252
>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 247
Score = 219 bits (558), Expect = 4e-54
Identities = 131/245 (53%), Positives = 148/245 (60%), Gaps = 7/245 (2%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXGLGP--ARRTFKRSINLTAPYSKPVQAPQAT 939
M SALDMSLDDII G GP ARR R N APY+ +AP+ T
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIPNRGANRVAPYTT-AKAPETT 59
Query: 938 WQHSMF---INXXXXXXXXXXXXGETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVH 768
WQH MF ++ ETGTKLYISNLDYGVSNEDI ELFSEVGDLKRYS+H
Sbjct: 60 WQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119
Query: 767 FDRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGM 588
+DRSGRSKGTAE V++RR +AVAAVKRYN VQLDGKPMKIEI+GTNI T A PA N
Sbjct: 120 YDRSGRSKGTAEVVYSRRADAVAAVKRYNTVQLDGKPMKIEIVGTNIATRTAA-PAANVN 178
Query: 587 YGNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAKPN--LSLEDLDADLKKYHE 414
+GN NG R RG A G + N +S EDLDADL KY+
Sbjct: 179 FGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLDKYYS 238
Query: 413 EAKQS 399
EA ++
Sbjct: 239 EASEA 243
>ref|XP_011624054.1| PREDICTED: THO complex subunit 4A isoform X2 [Amborella trichopoda]
Length = 250
Score = 218 bits (555), Expect = 8e-54
Identities = 128/248 (51%), Positives = 143/248 (57%), Gaps = 11/248 (4%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXGL------GPARRTFKRSINLTAPYSKPVQA 951
M SALDMSLDD+I G GP RR R+ N APYS A
Sbjct: 1 MSSALDMSLDDLIKNNKKSGGGGGGGVMRGRNRGGTSGPVRRIQNRTANRAAPYSMGKAA 60
Query: 950 PQATWQHSMFINXXXXXXXXXXXXG--ETGTKLYISNLDYGVSNEDINELFSEVGDLKRY 777
P+ TWQH +F + ETGTKLYISNLDYGVSNEDI ELFSEVGDLKRY
Sbjct: 61 PETTWQHDLFADPVGPYGVQAARPSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRY 120
Query: 776 SVHFDRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPAT 597
S+H+DRSGRSKGTAE VF+RR +AVAAVKRYNNVQLDGKPMKIEI+GTN+ TPA +
Sbjct: 121 SIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNLVTPAPIPQVA 180
Query: 596 NGMYGNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGA---KPNLSLEDLDADLK 426
NG+ NG RS RG I +S DLDADL+
Sbjct: 181 NGLLATPNGIPRSVQPRGAGIIGRGPRGGGRGGGRGRGRGGRGGGRGEKVSAADLDADLE 240
Query: 425 KYHEEAKQ 402
KYH EA Q
Sbjct: 241 KYHSEAMQ 248
>ref|XP_007016490.1| RNA-binding family protein [Theobroma cacao]
gi|508786853|gb|EOY34109.1| RNA-binding family protein
[Theobroma cacao]
Length = 241
Score = 218 bits (555), Expect = 8e-54
Identities = 125/243 (51%), Positives = 150/243 (61%), Gaps = 4/243 (1%)
Frame = -2
Query: 1112 MKSALDMSLDDIIXXXXXXXXXXXXXXXXGLGP--ARRTFKRSINLTAPYSKPVQAPQAT 939
M SAL+MSLDD+I G GP ARR R N + PY+ +AP+ T
Sbjct: 1 MSSALEMSLDDLIKRNRKSGSGNSRGRGRGSGPGPARRFPNRGANRSGPYTA-AKAPETT 59
Query: 938 WQHSMFINXXXXXXXXXXXXG--ETGTKLYISNLDYGVSNEDINELFSEVGDLKRYSVHF 765
WQH M+ + ETGTKLYISNLDYGVSN+DI ELF+EVGDLKR+++H+
Sbjct: 60 WQHDMYSDKGAAFQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRFTIHY 119
Query: 764 DRSGRSKGTAEAVFTRRTEAVAAVKRYNNVQLDGKPMKIEIIGTNIGTPAAVRPATNGMY 585
DRSGRSKGTAE VF+RRT+A+AAVKRYNNVQLDGKPMKIEI+GTN+ TP A A NG +
Sbjct: 120 DRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNVATPGA-PSAGNGAF 178
Query: 584 GNQNGASRSRLNRGDAIXXXXXXXXXXXXXXXXXXXXGAKPNLSLEDLDADLKKYHEEAK 405
GN NGA R RG G +S EDLDA+L+KYH EA
Sbjct: 179 GNSNGAPRGGHGRGGGFGKQRGGGGGRGFGRGRGRGKGRGEKVSAEDLDAELEKYHSEAM 238
Query: 404 QSD 396
Q++
Sbjct: 239 QTN 241