BLASTX nr result
ID: Zanthoxylum22_contig00005329
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00005329
(665 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi... 423 e-116
gb|KDO77898.1| hypothetical protein CISIN_1g047408mg [Citrus sin... 392 e-106
ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, part... 363 4e-98
ref|XP_010999774.1| PREDICTED: pentatricopeptide repeat-containi... 360 5e-97
ref|XP_010655542.1| PREDICTED: pentatricopeptide repeat-containi... 360 5e-97
ref|XP_012456795.1| PREDICTED: pentatricopeptide repeat-containi... 358 2e-96
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss... 358 2e-96
ref|XP_007025334.1| Pentatricopeptide, putative [Theobroma cacao... 353 4e-95
gb|KFK28546.1| hypothetical protein AALP_AA7G010600 [Arabis alpina] 348 2e-93
ref|XP_009352737.1| PREDICTED: pentatricopeptide repeat-containi... 344 3e-92
ref|XP_008366040.1| PREDICTED: pentatricopeptide repeat-containi... 344 3e-92
ref|XP_012092429.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 343 5e-92
ref|XP_011657608.1| PREDICTED: pentatricopeptide repeat-containi... 342 1e-91
ref|XP_002870024.1| pentatricopeptide repeat-containing protein ... 340 6e-91
ref|XP_010518818.1| PREDICTED: pentatricopeptide repeat-containi... 339 8e-91
ref|XP_010496887.1| PREDICTED: pentatricopeptide repeat-containi... 339 8e-91
ref|XP_010439814.1| PREDICTED: pentatricopeptide repeat-containi... 339 8e-91
ref|XP_010451385.1| PREDICTED: pentatricopeptide repeat-containi... 339 1e-90
ref|XP_011461308.1| PREDICTED: pentatricopeptide repeat-containi... 338 1e-90
ref|XP_011461307.1| PREDICTED: pentatricopeptide repeat-containi... 338 1e-90
>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Citrus sinensis]
Length = 872
Score = 423 bits (1087), Expect = e-116
Identities = 201/221 (90%), Positives = 211/221 (95%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
+YIKENDMQSSLYVSNALMDMYAKCGSMADAESV NQMPVKDIVSWNTMIGGYSKNSCPN
Sbjct: 424 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGGYSKNSCPN 483
Query: 181 EALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
EAL+LFVAMLQ EPD VTMACILPACASLAALERGREIHGYILRH S+DRNV NA++D
Sbjct: 484 EALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 543
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY KCGVLVLAR LFDMIPAKDLISWTIMIAGYGMHGFG +AIATFNDMRQAG+EPD+VS
Sbjct: 544 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 603
Query: 541 FISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
FISVLYACSHSGLVDEGWRFFN+MRYECN+EPKLEHYACMV
Sbjct: 604 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 644
Score = 139 bits (349), Expect = 2e-30
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 1/184 (0%)
Frame = +1
Query: 43 SNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-L 219
+N L+DMY+KCG + A V +M + +VSW +MI GY++ + A+ LF M++E +
Sbjct: 337 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 396
Query: 220 EPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARL 399
EPD + IL ACA LE G+++H YI + S V NA++DMYAKCG + A
Sbjct: 397 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 456
Query: 400 LFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGL 579
+F+ +P KD++SW MI GY + EA+ F M Q EPD V+ +L AC+
Sbjct: 457 VFNQMPVKDIVSWNTMIGGYSKNSCPNEALDLFVAMLQ-NFEPDGVTMACILPACASLAA 515
Query: 580 VDEG 591
++ G
Sbjct: 516 LERG 519
Score = 130 bits (327), Expect = 7e-28
Identities = 69/185 (37%), Positives = 104/185 (56%), Gaps = 1/185 (0%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ-E 216
V N+L+ Y K + DA + +++ +D+VSWN MI GY N + L +F ML
Sbjct: 235 VLNSLITYYFKSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 294
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLAR 396
D TM +L CA+ AL GR +H + L+ FS + + N ++DMY+KCG L A
Sbjct: 295 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 354
Query: 397 LLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
+F+ + + ++SWT MIAGY G AI F M + G+EPD + S+L+AC+ G
Sbjct: 355 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 414
Query: 577 LVDEG 591
L++ G
Sbjct: 415 LLEIG 419
Score = 101 bits (251), Expect = 5e-19
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ-E 216
+ + L+ M+ CG + + V N++ + WN ++ YSK E+L LF M
Sbjct: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLAR 396
+ DS T +C+L A + ++ G +HG++L+ F + V+N++I Y K + A
Sbjct: 194 IAADSYTFSCVLKCLAVVGNVKEGESVHGFMLKLGFGCNNTVLNSLITYYFKSRRVKDAH 253
Query: 397 LLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
LFD + +D++SW MI+GY +G + + F +M G D + ++VL C++ G
Sbjct: 254 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 313
Score = 62.0 bits (149), Expect = 3e-07
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Frame = +1
Query: 133 SWNTMIGGYSKNSCPNEALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYIL 312
++N IG + + +A+ + + ++ + D+ T IL CA L +LE G+++H I
Sbjct: 65 NYNAEIGRFCEVGNLEKAMEVLYSS-EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
Query: 313 RHSFSSDRNVVNA-VIDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAI 489
D V+ + ++ M+ CG L R +F+ I + W +++ Y G +E++
Sbjct: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
Query: 490 ATFNDMRQAGVEPDDVSFISVLYACSHSGLVDEG 591
F M+ G+ D +F VL + G V EG
Sbjct: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNVKEG 217
>gb|KDO77898.1| hypothetical protein CISIN_1g047408mg [Citrus sinensis]
Length = 830
Score = 392 bits (1007), Expect = e-106
Identities = 191/221 (86%), Positives = 201/221 (90%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
+YIKENDMQSSLYVSNALMDMYAKCGSMADAESV NQMPVKDIVSWNTMIG
Sbjct: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
Query: 181 EALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
AL+LFVAMLQ EPD VTMACILPACASLAALERGREIHGYILRH S+DRNV NA++D
Sbjct: 443 -ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY KCGVLVLAR LFDMIPAKDLISWTIMIAGYGMHGFG +AIATFNDMRQAG+EPD+VS
Sbjct: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
Query: 541 FISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
FISVLYACSHSGLVDEGWRFFN+MRYECN+EPKLEHYACMV
Sbjct: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
Score = 125 bits (314), Expect = 2e-26
Identities = 69/184 (37%), Positives = 103/184 (55%), Gaps = 1/184 (0%)
Frame = +1
Query: 43 SNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-L 219
+N L+DMY+KCG + A V +M + +VSW +MI GY++ + A+ LF M++E +
Sbjct: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
Query: 220 EPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARL 399
EPD + IL ACA LE G+++H YI + S V NA++DMYAKCG + A
Sbjct: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
Query: 400 LFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGL 579
+F+ +P KD++SW MI A+ F M Q EPD V+ +L AC+
Sbjct: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAA 473
Query: 580 VDEG 591
++ G
Sbjct: 474 LERG 477
Score = 125 bits (313), Expect = 3e-26
Identities = 74/216 (34%), Positives = 112/216 (51%), Gaps = 19/216 (8%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALM------DMYA-----KCGSMA-------DAESVLNQMPVKD 126
EY K + + SLY+ + D Y KC ++ DA + +++ +D
Sbjct: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD 231
Query: 127 IVSWNTMIGGYSKNSCPNEALNLFVAMLQ-ELEPDSVTMACILPACASLAALERGREIHG 303
+VSWN MI GY N + L +F ML D TM +L CA+ AL GR +H
Sbjct: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
Query: 304 YILRHSFSSDRNVVNAVIDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGRE 483
+ L+ FS + + N ++DMY+KCG L A +F+ + + ++SWT MIAGY G
Sbjct: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
Query: 484 AIATFNDMRQAGVEPDDVSFISVLYACSHSGLVDEG 591
AI F M + G+EPD + S+L+AC+ GL++ G
Sbjct: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
Score = 58.2 bits (139), Expect = 4e-06
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Frame = +1
Query: 133 SWNTMIGGYSKNSCPNEALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYIL 312
++N IG + + +A+ + + ++ + D+ T IL CA L +LE G+++H I
Sbjct: 65 NYNAEIGRFCEVGNLEKAMEVLYSS-EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
Query: 313 RHSFSSDRNVVNA-VIDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAI 489
D V+ + ++ M+ CG L R +F+ I + W +++ Y G +E++
Sbjct: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
Query: 490 ATFNDMRQAGVEPDDVSFISVL 555
F M+ G+ D +F VL
Sbjct: 184 YLFKKMQSLGIAADSYTFSCVL 205
>ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, partial [Populus
trichocarpa] gi|550340410|gb|EEE86244.2| hypothetical
protein POPTR_0004s05810g, partial [Populus trichocarpa]
Length = 778
Score = 363 bits (933), Expect = 4e-98
Identities = 166/220 (75%), Positives = 198/220 (90%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
YI+ENDMQS+++V NALMDMYAKCGSM DA SV +MPVKDI+SWNTMIGGYSKNS PNE
Sbjct: 331 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 390
Query: 184 ALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDM 363
AL+LF M+ E++PD T+ACILPACASLA+L+RG+E+HG+ILR+ F SD+ V NA++DM
Sbjct: 391 ALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDM 450
Query: 364 YAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSF 543
Y KCGV VLARLLFDMIP KDLI+WT+MIAGYGMHGFG AI TFN+MRQAG+EPD+VSF
Sbjct: 451 YVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSF 510
Query: 544 ISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
IS+LYACSHSGL+DEGWRFFN+M+ ECN++PKLEHYAC+V
Sbjct: 511 ISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIV 550
Score = 137 bits (346), Expect = 4e-30
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 1/183 (0%)
Frame = +1
Query: 46 NALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-LE 222
N L+DMYAKCG + A V + M V+ +V+W ++I Y++ +EA+ LF M +E +
Sbjct: 244 NTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVS 303
Query: 223 PDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLL 402
PD T+ +L ACA +LE G+++H YI + S+ V NA++DMYAKCG + A +
Sbjct: 304 PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSV 363
Query: 403 FDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGLV 582
F +P KD+ISW MI GY + EA++ F DM ++PD + +L AC+ +
Sbjct: 364 FLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDM-VLEMKPDGTTLACILPACASLASL 422
Query: 583 DEG 591
D G
Sbjct: 423 DRG 425
Score = 129 bits (323), Expect = 2e-27
Identities = 68/193 (35%), Positives = 109/193 (56%), Gaps = 1/193 (0%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ-E 216
V N+L+ Y K + A + +++ +D++SWN+MI GY N + + LF ML
Sbjct: 141 VVNSLIAFYLKIRRVDVARKLFDELSNRDVISWNSMISGYVANGFSEKGVELFKKMLYLG 200
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLAR 396
++ D TM IL ACA+ + GR +HG ++ N ++DMYAKCGVL A
Sbjct: 201 VDMDLATMVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAI 260
Query: 397 LLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
L+FD++ + +++WT +IA Y G EAI F++M + GV PD + +VL+AC+ +G
Sbjct: 261 LVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNG 320
Query: 577 LVDEGWRFFNLMR 615
++ G N +R
Sbjct: 321 SLENGKDVHNYIR 333
Score = 118 bits (295), Expect = 4e-24
Identities = 61/185 (32%), Positives = 108/185 (58%), Gaps = 1/185 (0%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ-E 216
+ + L+ MY CG + + + +++ + + WN M+ GY+K E+++LF ML
Sbjct: 40 LGSKLVFMYVTCGDLREGRLIFDKIRNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLG 99
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLAR 396
+E +S T++C+L A+L +++ G+ +HG++L+ S VVN++I Y K + +AR
Sbjct: 100 VEVNSHTVSCVLKCFAALGSVKEGKWVHGFLLKLGLGSYNAVVNSLIAFYLKIRRVDVAR 159
Query: 397 LLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
LFD + +D+ISW MI+GY +GF + + F M GV+ D + +S+L AC++ G
Sbjct: 160 KLFDELSNRDVISWNSMISGYVANGFSEKGVELFKKMLYLGVDMDLATMVSILQACANCG 219
Query: 577 LVDEG 591
V G
Sbjct: 220 DVSLG 224
Score = 67.0 bits (162), Expect = 1e-08
Identities = 39/122 (31%), Positives = 62/122 (50%)
Frame = +1
Query: 226 DSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLLF 405
+S T IL A L +L+ G+++H +I S D + + ++ MY CG L RL+F
Sbjct: 2 ESRTCCSILQLSAELKSLQDGKKVHSFICSSGISIDSVLGSKLVFMYVTCGDLREGRLIF 61
Query: 406 DMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGLVD 585
D I + + W +M+ GY G +E+++ F M GVE + + VL + G V
Sbjct: 62 DKIRNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVNSHTVSCVLKCFAALGSVK 121
Query: 586 EG 591
EG
Sbjct: 122 EG 123
>ref|XP_010999774.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Populus euphratica]
Length = 879
Score = 360 bits (923), Expect = 5e-97
Identities = 163/220 (74%), Positives = 198/220 (90%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
YI+ENDMQS+++V NALMDMYAKCGSM DA SV ++PVKDI+SWNTMIGGYSKNS PNE
Sbjct: 432 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEIPVKDIISWNTMIGGYSKNSLPNE 491
Query: 184 ALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDM 363
AL+LF AM+ E++PD T+ACILPACASLA+L++G+E+HG+ILR+ F SD+ V NA++DM
Sbjct: 492 ALSLFGAMVLEMKPDGTTLACILPACASLASLDKGKEVHGHILRNGFFSDQQVANALVDM 551
Query: 364 YAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSF 543
Y KCGV VLARLLFDMIP KDLI+WT+MIAGYGMHGFG AI TFN+MR AG+EPD+VSF
Sbjct: 552 YVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRLAGIEPDEVSF 611
Query: 544 ISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
IS+LYACSHSGL++EGWRFFN+M+ ECN++PKLEHYAC+V
Sbjct: 612 ISILYACSHSGLLEEGWRFFNVMKDECNIKPKLEHYACIV 651
Score = 136 bits (343), Expect = 1e-29
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 1/183 (0%)
Frame = +1
Query: 46 NALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-LE 222
N L+DMYAKCG + A V + M V+ +V+W ++I Y++ +EA+ LF M +E +
Sbjct: 345 NTLLDMYAKCGVLDGAIRVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVS 404
Query: 223 PDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLL 402
PD T+ +L ACA +LE G+++H YI + S+ V NA++DMYAKCG + A +
Sbjct: 405 PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSV 464
Query: 403 FDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGLV 582
F IP KD+ISW MI GY + EA++ F M ++PD + +L AC+ +
Sbjct: 465 FLEIPVKDIISWNTMIGGYSKNSLPNEALSLFGAM-VLEMKPDGTTLACILPACASLASL 523
Query: 583 DEG 591
D+G
Sbjct: 524 DKG 526
Score = 129 bits (325), Expect = 1e-27
Identities = 67/193 (34%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE- 216
V N+L+ Y K + A + +++ +D++SWN+MI GY N + + LF ML
Sbjct: 242 VVNSLIAFYLKMRRVDVARKLFDELTDRDVISWNSMISGYVANGFSEKGVELFKKMLYSG 301
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLAR 396
++ D TM IL ACA+ + GR +HG ++ N ++DMYAKCGVL A
Sbjct: 302 VDMDLATMVSILQACANCGYVSLGRAVHGSAVKACVHGKTTFCNTLLDMYAKCGVLDGAI 361
Query: 397 LLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
+FD++ + +++WT +IA Y G EAI F++M + GV PD + +VL+AC+ +G
Sbjct: 362 RVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNG 421
Query: 577 LVDEGWRFFNLMR 615
++ G N +R
Sbjct: 422 SLENGKDVHNYIR 434
Score = 120 bits (302), Expect = 6e-25
Identities = 62/185 (33%), Positives = 109/185 (58%), Gaps = 1/185 (0%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ-E 216
+ + L+ MY CG + + + +++ + + WN M+ GY+K E+++LF ML
Sbjct: 141 LGSKLVFMYVTCGDLREGRPIFDKIRNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLG 200
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLAR 396
+E +S T++CIL A+L +++ G+ +HG++L+ S VVN++I Y K + +AR
Sbjct: 201 VEVNSHTVSCILKCFAALGSVKEGKWVHGFLLKLGLGSCNAVVNSLIAFYLKMRRVDVAR 260
Query: 397 LLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
LFD + +D+ISW MI+GY +GF + + F M +GV+ D + +S+L AC++ G
Sbjct: 261 KLFDELTDRDVISWNSMISGYVANGFSEKGVELFKKMLYSGVDMDLATMVSILQACANCG 320
Query: 577 LVDEG 591
V G
Sbjct: 321 YVSLG 325
Score = 68.6 bits (166), Expect = 3e-09
Identities = 45/155 (29%), Positives = 74/155 (47%)
Frame = +1
Query: 127 IVSWNTMIGGYSKNSCPNEALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGY 306
I WN I + ++A+ L M + E +S T IL A L +L+ G+++H +
Sbjct: 71 ITDWNKKIYEVCEMGNIDKAIELLY-MSPKAEIESRTCCSILQLSAELKSLQDGKKVHSF 129
Query: 307 ILRHSFSSDRNVVNAVIDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREA 486
I S D + + ++ MY CG L R +FD I + + W +M+ GY G +E+
Sbjct: 130 ICSSGISIDSVLGSKLVFMYVTCGDLREGRPIFDKIRNEKVFLWNLMMNGYTKIGDFKES 189
Query: 487 IATFNDMRQAGVEPDDVSFISVLYACSHSGLVDEG 591
++ F M GVE + + +L + G V EG
Sbjct: 190 VSLFRQMLDLGVEVNSHTVSCILKCFAALGSVKEG 224
>ref|XP_010655542.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Vitis vinifera]
Length = 876
Score = 360 bits (923), Expect = 5e-97
Identities = 169/220 (76%), Positives = 193/220 (87%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
YIKEN MQS L+VSNALMDMYAKCGSM DA SV ++M VKDIVSWNTMIGGYSKNS PNE
Sbjct: 429 YIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNE 488
Query: 184 ALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDM 363
ALNLFV M +P+S+TMACILPACASLAALERG+EIHG+ILR+ FS DR+V NA++DM
Sbjct: 489 ALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDM 548
Query: 364 YAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSF 543
Y KCG L LARLLFDMIP KDL+SWT+MIAGYGMHG+G EAIA FN+MR +G+EPD+VSF
Sbjct: 549 YLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSF 608
Query: 544 ISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
IS+LYACSHSGL+DEGW FFN+MR C +EPK EHYAC+V
Sbjct: 609 ISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIV 648
Score = 132 bits (331), Expect = 2e-28
Identities = 68/187 (36%), Positives = 107/187 (57%), Gaps = 1/187 (0%)
Frame = +1
Query: 34 LYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ 213
L ++N L+DMY+K G++ A V M + +VSW +MI GY++ + ++ LF M +
Sbjct: 338 LTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEK 397
Query: 214 E-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVL 390
E + PD T+ IL ACA LE G+++H YI + SD V NA++DMYAKCG +
Sbjct: 398 EGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGD 457
Query: 391 ARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSH 570
A +F + KD++SW MI GY + EA+ F +M Q +P+ ++ +L AC+
Sbjct: 458 AHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACAS 516
Query: 571 SGLVDEG 591
++ G
Sbjct: 517 LAALERG 523
Score = 128 bits (322), Expect = 3e-27
Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 1/193 (0%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ-E 216
V N+L+ Y K + A + +++ +D++SWN+MI GY N + L+LF ML
Sbjct: 239 VVNSLIAFYFKIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLG 298
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLAR 396
+ D TM ++ C++ L GR +HGY ++ SF + + N ++DMY+K G L A
Sbjct: 299 INTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAI 358
Query: 397 LLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
+F+ + + ++SWT MIAGY G ++ F++M + G+ PD + ++L+AC+ +G
Sbjct: 359 QVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTG 418
Query: 577 LVDEGWRFFNLMR 615
L++ G N ++
Sbjct: 419 LLENGKDVHNYIK 431
Score = 114 bits (286), Expect = 4e-23
Identities = 58/193 (30%), Positives = 107/193 (55%), Gaps = 1/193 (0%)
Frame = +1
Query: 7 IKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEA 186
I+ ND++ + + L+ MY CG + + + +++ + + WN ++ GY+K E+
Sbjct: 127 IQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRES 186
Query: 187 LNLFVAMLQ-ELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDM 363
L+LF M + ++ +S T +C++ A+ ++E G +H Y+ R F S VVN++I
Sbjct: 187 LSLFKRMRELGVKMNSYTFSCVMKCYAASGSVEEGEGVHAYLSRLGFGSYNTVVNSLIAF 246
Query: 364 YAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSF 543
Y K + AR LFD + +D+ISW MI+GY +G + + F M G+ D +
Sbjct: 247 YFKIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATM 306
Query: 544 ISVLYACSHSGLV 582
+SV+ CS++G++
Sbjct: 307 VSVVAGCSNTGML 319
Score = 71.6 bits (174), Expect = 4e-10
Identities = 37/119 (31%), Positives = 63/119 (52%)
Frame = +1
Query: 235 TMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLLFDMI 414
T +L CA L +++ GR IH I + D + + ++ MY CG L R +FD +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 415 PAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGLVDEG 591
+ + W +++ GY G RE+++ F MR+ GV+ + +F V+ + SG V+EG
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGVKMNSYTFSCVMKCYAASGSVEEG 221
>ref|XP_012456795.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Gossypium raimondii]
gi|763802760|gb|KJB69698.1| hypothetical protein
B456_011G038100 [Gossypium raimondii]
Length = 875
Score = 358 bits (918), Expect = 2e-96
Identities = 165/221 (74%), Positives = 197/221 (89%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
+YIK N+M S+L+V NALMDMYAKCGSM A SV + M VKDI+SWNTM+GGYSKN PN
Sbjct: 426 DYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPN 485
Query: 181 EALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
EAL F AML+EL+PDS TMACILPACASL+ALERG+EIHGYILR+ +SSDR+V NA++D
Sbjct: 486 EALKTFAAMLKELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVD 545
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
+Y KCGVL LARLLFDMIP+KDL+SWT+MIAGYGMHG+G EAIATFN+MR AG+EPD+VS
Sbjct: 546 LYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVS 605
Query: 541 FISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
FIS+LYACSHSGL+++GWRFF +M+ + N+EPKLEHYACMV
Sbjct: 606 FISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMV 646
Score = 128 bits (321), Expect = 4e-27
Identities = 67/194 (34%), Positives = 114/194 (58%), Gaps = 1/194 (0%)
Frame = +1
Query: 13 ENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALN 192
++ + + SN L+DMY+KCG + A V +M +++VSW +MI GY+++ + A+
Sbjct: 329 KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAII 388
Query: 193 LFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYA 369
L M +E ++ D V + IL ACA +L+ G+++H YI ++ +S+ V NA++DMYA
Sbjct: 389 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYA 448
Query: 370 KCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFIS 549
KCG + A +F + KD+ISW M+ GY + EA+ TF M + ++PD +
Sbjct: 449 KCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LKPDSRTMAC 507
Query: 550 VLYACSHSGLVDEG 591
+L AC+ ++ G
Sbjct: 508 ILPACASLSALERG 521
Score = 120 bits (301), Expect = 7e-25
Identities = 62/185 (33%), Positives = 101/185 (54%), Gaps = 1/185 (0%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ-E 216
V N+L+ Y K A + +++ +D++SWN+MI GY N L ++ M+
Sbjct: 237 VVNSLIAFYFKGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 296
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLAR 396
++ D T+ +L CA L G+ +H ++ SF N N ++DMY+KCG L A
Sbjct: 297 IDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 356
Query: 397 LLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
+F+ + ++++SWT MIAGY G+ AI M + GV+ D V+ S+L+AC+ SG
Sbjct: 357 RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG 416
Query: 577 LVDEG 591
+D G
Sbjct: 417 SLDNG 421
Score = 117 bits (294), Expect = 5e-24
Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 1/196 (0%)
Frame = +1
Query: 7 IKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEA 186
IK N + + L+ YA CG + + V + M K++ WN M+ Y+K E+
Sbjct: 125 IKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKES 184
Query: 187 LNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDM 363
+ LF M+++ +E +S T +C+L A+L +L+ G +HGY+L+ F S +VVN++I
Sbjct: 185 ICLFKIMVEKGIEVNSYTFSCVLKCFAALGSLKEGECVHGYLLKLGFGSCNSVVNSLIAF 244
Query: 364 YAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSF 543
Y K A LFD + +D+ISW MI+GY +G + + M G++ D +
Sbjct: 245 YFKGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATI 304
Query: 544 ISVLYACSHSGLVDEG 591
ISVL C+ SG + G
Sbjct: 305 ISVLVGCAKSGTLSLG 320
Score = 70.5 bits (171), Expect = 9e-10
Identities = 39/131 (29%), Positives = 66/131 (50%)
Frame = +1
Query: 199 VAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCG 378
V M ++ E ++ T +L CA L +L G+++H I +S D + ++ YA CG
Sbjct: 89 VCMCEKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCG 148
Query: 379 VLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLY 558
L R +FD + K++ W M++ Y G +E+I F M + G+E + +F VL
Sbjct: 149 DLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSYTFSCVLK 208
Query: 559 ACSHSGLVDEG 591
+ G + EG
Sbjct: 209 CFAALGSLKEG 219
>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 875
Score = 358 bits (918), Expect = 2e-96
Identities = 165/221 (74%), Positives = 197/221 (89%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
+YIK N+M S+L+V NALMDMYAKCGSM A SV + M VKDI+SWNTM+GGYSKN PN
Sbjct: 426 DYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPN 485
Query: 181 EALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
EAL F AML+EL+PDS TMACILPACASL+ALERG+EIHGYILR+ +SSDR+V NA++D
Sbjct: 486 EALKTFAAMLKELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVD 545
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
+Y KCGVL LARLLFDMIP+KDL+SWT+MIAGYGMHG+G EAIATFN+MR AG+EPD+VS
Sbjct: 546 LYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVS 605
Query: 541 FISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
FIS+LYACSHSGL+++GWRFF +M+ + N+EPKLEHYACMV
Sbjct: 606 FISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMV 646
Score = 128 bits (321), Expect = 4e-27
Identities = 67/194 (34%), Positives = 114/194 (58%), Gaps = 1/194 (0%)
Frame = +1
Query: 13 ENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALN 192
++ + + SN L+DMY+KCG + A V +M +++VSW +MI GY+++ + A+
Sbjct: 329 KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAII 388
Query: 193 LFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYA 369
L M +E ++ D V + IL ACA +L+ G+++H YI ++ +S+ V NA++DMYA
Sbjct: 389 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYA 448
Query: 370 KCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFIS 549
KCG + A +F + KD+ISW M+ GY + EA+ TF M + ++PD +
Sbjct: 449 KCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LKPDSRTMAC 507
Query: 550 VLYACSHSGLVDEG 591
+L AC+ ++ G
Sbjct: 508 ILPACASLSALERG 521
Score = 120 bits (301), Expect = 7e-25
Identities = 62/185 (33%), Positives = 102/185 (55%), Gaps = 1/185 (0%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ-E 216
V N+L+ Y K A + +++ +D++SWN+MI GY N L ++ M+
Sbjct: 237 VVNSLIAFYFKGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 296
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLAR 396
++ D T+ +L CA+ L G+ +H ++ SF N N ++DMY+KCG L A
Sbjct: 297 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 356
Query: 397 LLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
+F+ + ++++SWT MIAGY G+ AI M + GV+ D V+ S+L+AC+ SG
Sbjct: 357 RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG 416
Query: 577 LVDEG 591
+D G
Sbjct: 417 SLDNG 421
Score = 118 bits (295), Expect = 4e-24
Identities = 65/196 (33%), Positives = 106/196 (54%), Gaps = 1/196 (0%)
Frame = +1
Query: 7 IKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEA 186
IK N + + L+ YA CG + + V + M K++ WN M+ Y+K E+
Sbjct: 125 IKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKES 184
Query: 187 LNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDM 363
+ LF M+++ +E +S T +C+L A+L +L+ G +HGY+L+ F S +VVN++I
Sbjct: 185 ICLFKIMVEKGIEVNSYTFSCVLKCFAALGSLKEGECVHGYLLKLGFGSCNSVVNSLIAF 244
Query: 364 YAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSF 543
Y K A LFD + +D+ISW MI+GY +G + + M G++ D +
Sbjct: 245 YFKGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATI 304
Query: 544 ISVLYACSHSGLVDEG 591
ISVL C++SG + G
Sbjct: 305 ISVLVGCANSGTLSLG 320
Score = 71.6 bits (174), Expect = 4e-10
Identities = 40/131 (30%), Positives = 66/131 (50%)
Frame = +1
Query: 199 VAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCG 378
V M Q+ E ++ T +L CA L +L G+++H I +S D + ++ YA CG
Sbjct: 89 VCMCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCG 148
Query: 379 VLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLY 558
L R +FD + K++ W M++ Y G +E+I F M + G+E + +F VL
Sbjct: 149 DLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSYTFSCVLK 208
Query: 559 ACSHSGLVDEG 591
+ G + EG
Sbjct: 209 CFAALGSLKEG 219
>ref|XP_007025334.1| Pentatricopeptide, putative [Theobroma cacao]
gi|508780700|gb|EOY27956.1| Pentatricopeptide, putative
[Theobroma cacao]
Length = 874
Score = 353 bits (907), Expect = 4e-95
Identities = 162/221 (73%), Positives = 196/221 (88%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
+YIK N+++S+L+V NALMDMYAKCGSM DA S+ ++M VKDI+SWNTMIGGYSKN PN
Sbjct: 426 DYIKANNVESNLFVCNALMDMYAKCGSMEDANSIFSRMAVKDIISWNTMIGGYSKNCLPN 485
Query: 181 EALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
EAL + AML+EL+PDS T+ACILPACASLAALERG+EIHG+ILR+ + SDR+V NA++D
Sbjct: 486 EALKMLAAMLKELKPDSRTLACILPACASLAALERGKEIHGHILRNGYFSDRHVANALVD 545
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
+Y KCGVL LARLLFDMI +KDL+SWT+MIAGYGMHGF EAI TFN+MR AG+EPD+VS
Sbjct: 546 LYVKCGVLALARLLFDMISSKDLVSWTVMIAGYGMHGFANEAITTFNEMRDAGIEPDEVS 605
Query: 541 FISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
FIS+LYACSHSGL++EGWRFF +MR + N+EPKLEHYACMV
Sbjct: 606 FISILYACSHSGLLEEGWRFFYIMRNDYNIEPKLEHYACMV 646
Score = 124 bits (312), Expect = 4e-26
Identities = 66/190 (34%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Frame = +1
Query: 25 QSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVA 204
+ L +N L+DMY+KCG + A V +M +++VSW +MI GY+++ + A+ L
Sbjct: 333 ERKLNFNNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGQSDGAIRLLQQ 392
Query: 205 MLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGV 381
M +E ++ D V + +L ACA +LE G+++H YI ++ S+ V NA++DMYAKCG
Sbjct: 393 MEREGVKLDVVAITSVLHACARSGSLENGKDVHDYIKANNVESNLFVCNALMDMYAKCGS 452
Query: 382 LVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYA 561
+ A +F + KD+ISW MI GY + EA+ M + ++PD + +L A
Sbjct: 453 MEDANSIFSRMAVKDIISWNTMIGGYSKNCLPNEALKMLAAMLKE-LKPDSRTLACILPA 511
Query: 562 CSHSGLVDEG 591
C+ ++ G
Sbjct: 512 CASLAALERG 521
Score = 121 bits (303), Expect = 4e-25
Identities = 62/196 (31%), Positives = 106/196 (54%), Gaps = 1/196 (0%)
Frame = +1
Query: 7 IKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEA 186
I N + + + L+ Y CG + + + ++M K + WN M+ Y+K E+
Sbjct: 125 INSNGVAVDEVLGSKLVSFYVTCGDLKEGRGIFDEMEKKKVFLWNYMLNEYAKFGDFKES 184
Query: 187 LNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDM 363
+ LF M+++ +E DS T +CIL A+ L+ G +HGY+L+ F S +VVN++I
Sbjct: 185 IYLFKMMMKKGIEVDSYTFSCILKCLAASGGLKEGERVHGYLLKLGFGSYNSVVNSLITF 244
Query: 364 YAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSF 543
Y K + A LFD + +D+ISW MI+GY +G + + F +M G++ D +
Sbjct: 245 YFKGKRVESASELFDELIDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLGIDVDLATI 304
Query: 544 ISVLYACSHSGLVDEG 591
++VL C++SG + G
Sbjct: 305 VTVLVGCANSGTLSLG 320
Score = 120 bits (300), Expect = 1e-24
Identities = 63/185 (34%), Positives = 102/185 (55%), Gaps = 1/185 (0%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ-E 216
V N+L+ Y K + A + +++ +D++SWN+MI GY N + L +F ML
Sbjct: 237 VVNSLITFYFKGKRVESASELFDELIDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLG 296
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLAR 396
++ D T+ +L CA+ L G+ +H ++ F N N ++DMY+KCG L A
Sbjct: 297 IDVDLATIVTVLVGCANSGTLSLGKAVHALAIKACFERKLNFNNTLLDMYSKCGDLDGAL 356
Query: 397 LLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
+F+ + ++++SWT MIAGY G AI M + GV+ D V+ SVL+AC+ SG
Sbjct: 357 RVFEKMGERNVVSWTSMIAGYTRDGQSDGAIRLLQQMEREGVKLDVVAITSVLHACARSG 416
Query: 577 LVDEG 591
++ G
Sbjct: 417 SLENG 421
Score = 70.5 bits (171), Expect = 9e-10
Identities = 44/157 (28%), Positives = 76/157 (48%)
Frame = +1
Query: 127 IVSWNTMIGGYSKNSCPNEALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGY 306
+ +N I + + + A+ L ++M E +S T IL CA L +L+ G+++H
Sbjct: 66 VTDYNARIFQFCQLGNLHNAMEL-LSMSPNSELESKTYCSILQLCADLKSLKDGKKVHSI 124
Query: 307 ILRHSFSSDRNVVNAVIDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREA 486
I + + D + + ++ Y CG L R +FD + K + W M+ Y G +E+
Sbjct: 125 INSNGVAVDEVLGSKLVSFYVTCGDLKEGRGIFDEMEKKKVFLWNYMLNEYAKFGDFKES 184
Query: 487 IATFNDMRQAGVEPDDVSFISVLYACSHSGLVDEGWR 597
I F M + G+E D +F +L + SG + EG R
Sbjct: 185 IYLFKMMMKKGIEVDSYTFSCILKCLAASGGLKEGER 221
>gb|KFK28546.1| hypothetical protein AALP_AA7G010600 [Arabis alpina]
Length = 853
Score = 348 bits (893), Expect = 2e-93
Identities = 159/223 (71%), Positives = 196/223 (87%), Gaps = 2/223 (0%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
E+IKENDM ++VSNALMDMYAKCGSM +AE V ++MPVKDI SWNT+IGGYSKN N
Sbjct: 403 EWIKENDMGFDMFVSNALMDMYAKCGSMREAELVFSEMPVKDIYSWNTVIGGYSKNCYAN 462
Query: 181 EALNLFVAMLQE--LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAV 354
EAL+LF ML+E ++PD T+AC+LPACASL+A ++GREIHGYI+R+ + SDR++ N++
Sbjct: 463 EALSLFSLMLEEKRVDPDERTVACLLPACASLSAFDKGREIHGYIMRNRYFSDRHIANSL 522
Query: 355 IDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDD 534
+DMYAKCG L+LAR+LFD I +KDL+SWT+MIAGYGMHGFG+EAIA FN MRQAG+EPD+
Sbjct: 523 VDMYAKCGALLLARMLFDEIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDE 582
Query: 535 VSFISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
+SF+SVLYACSHSGLVDEGWRFFNLMRY+C +EP LEHYAC+V
Sbjct: 583 ISFVSVLYACSHSGLVDEGWRFFNLMRYDCKIEPTLEHYACIV 625
Score = 124 bits (312), Expect = 4e-26
Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 2/200 (1%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
Y+ ++ V N++M Y K + A V ++M +D++SWN+MI GY N E
Sbjct: 204 YVLKSGFGDCNSVGNSVMAFYLKKKRVESARKVFDEMSERDVISWNSMINGYIDNGLAEE 263
Query: 184 ALNLFVAML-QELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
L++FV ML +E D T+ +L C GR +HG L+ + N ++D
Sbjct: 264 GLSVFVRMLCSGIEVDLATLVSVLAGCVDSRL---GRAVHGIGLKACLGQEDRFCNKLLD 320
Query: 361 MYAKCGVLVLARLLF-DMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDV 537
MY+KCG L A+++F M + ++S+T +IAGY G EA+ F +M + G+ PD
Sbjct: 321 MYSKCGDLDSAKIVFAGMSDRRSVVSYTSLIAGYAREGLAGEAVKLFAEMEEEGISPDVY 380
Query: 538 SFISVLYACSHSGLVDEGWR 597
S +VL C+ + L+DEG R
Sbjct: 381 SVTAVLNCCARNRLLDEGKR 400
Score = 123 bits (309), Expect = 9e-26
Identities = 65/185 (35%), Positives = 106/185 (57%), Gaps = 3/185 (1%)
Frame = +1
Query: 46 NALMDMYAKCGSMADAESVLNQMPVK-DIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-L 219
N L+DMY+KCG + A+ V M + +VS+ ++I GY++ EA+ LF M +E +
Sbjct: 316 NKLLDMYSKCGDLDSAKIVFAGMSDRRSVVSYTSLIAGYAREGLAGEAVKLFAEMEEEGI 375
Query: 220 EPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARL 399
PD ++ +L CA L+ G+ +H +I + D V NA++DMYAKCG + A L
Sbjct: 376 SPDVYSVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDMFVSNALMDMYAKCGSMREAEL 435
Query: 400 LFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDM-RQAGVEPDDVSFISVLYACSHSG 576
+F +P KD+ SW +I GY + + EA++ F+ M + V+PD+ + +L AC+
Sbjct: 436 VFSEMPVKDIYSWNTVIGGYSKNCYANEALSLFSLMLEEKRVDPDERTVACLLPACASLS 495
Query: 577 LVDEG 591
D+G
Sbjct: 496 AFDKG 500
Score = 99.0 bits (245), Expect = 2e-18
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
+I+ N + + L MY CG + +A V Q+ ++ + WN +I K +
Sbjct: 106 FIRSNGFVLDSNLGSKLALMYTNCGDLVEARRVFEQVRIEKALFWNLLINELGKVGDFSG 165
Query: 184 ALNLFVAMLQ-ELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
++ LF M+ +E D T +C+ S + G E HGY+L+ F +V N+V+
Sbjct: 166 SIELFKKMMSFGIEMDRYTFSCV---SKSFTNVNGGEEFHGYVLKSGFGDCNSVGNSVMA 222
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
Y K + AR +FD + +D+ISW MI GY +G E ++ F M +G+E D +
Sbjct: 223 FYLKKKRVESARKVFDEMSERDVISWNSMINGYIDNGLAEEGLSVFVRMLCSGIEVDLAT 282
Query: 541 FISVLYACSHSGL 579
+SVL C S L
Sbjct: 283 LVSVLAGCVDSRL 295
Score = 60.8 bits (146), Expect = 7e-07
Identities = 35/114 (30%), Positives = 58/114 (50%)
Frame = +1
Query: 211 QELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVL 390
Q+++P T+ +L CA +L+ G+EI +I + F D N+ + + MY CG LV
Sbjct: 77 QDIDPR--TLCSVLQLCADSRSLKDGKEIDSFIRSNGFVLDSNLGSKLALMYTNCGDLVE 134
Query: 391 ARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISV 552
AR +F+ + + + W ++I G G +I F M G+E D +F V
Sbjct: 135 ARRVFEQVRIEKALFWNLLINELGKVGDFSGSIELFKKMMSFGIEMDRYTFSCV 188
>ref|XP_009352737.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic [Pyrus x bretschneideri]
Length = 879
Score = 344 bits (882), Expect = 3e-92
Identities = 162/220 (73%), Positives = 188/220 (85%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
YIKE+ M SSLYV N LMDMYAKCGSM DA SV ++MP KDIVSWNTMIGGYSKN PNE
Sbjct: 432 YIKEHGMDSSLYVCNTLMDMYAKCGSMEDAHSVFSRMPAKDIVSWNTMIGGYSKNCLPNE 491
Query: 184 ALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDM 363
AL LF M+Q+ +PDS+T+A ILPACASLAAL RG+EIHG+ILR+ + S+R+V NA++DM
Sbjct: 492 ALKLFSEMMQKSKPDSMTIASILPACASLAALNRGQEIHGHILRNGYFSERHVANALVDM 551
Query: 364 YAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSF 543
Y KCGVLVLARLLFDM P KDLISWT+++AGYGMHGFGREAIA FN+MR+AG EPD VSF
Sbjct: 552 YVKCGVLVLARLLFDMFPVKDLISWTVIVAGYGMHGFGREAIAAFNEMRKAGTEPDGVSF 611
Query: 544 ISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
+S+LYACSHSGL DE WRFF+ MR + + PKLEHYACMV
Sbjct: 612 VSILYACSHSGLRDEAWRFFDTMRNDYGIVPKLEHYACMV 651
Score = 147 bits (371), Expect = 6e-33
Identities = 72/183 (39%), Positives = 112/183 (61%), Gaps = 1/183 (0%)
Frame = +1
Query: 46 NALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-LE 222
N ++DMY+KCG ++ A V +M + +VSW +MI G+ + +EA+ LF M ++ +
Sbjct: 345 NNVLDMYSKCGDLSSAIQVFKKMGERSVVSWTSMIAGHIREGLSDEAIGLFSEMERDGVN 404
Query: 223 PDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLL 402
PD+ T+ IL ACAS +L++GR+IH YI H S V N ++DMYAKCG + A +
Sbjct: 405 PDAYTITSILHACASSGSLKKGRDIHNYIKEHGMDSSLYVCNTLMDMYAKCGSMEDAHSV 464
Query: 403 FDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGLV 582
F +PAKD++SW MI GY + EA+ F++M Q +PD ++ S+L AC+ +
Sbjct: 465 FSRMPAKDIVSWNTMIGGYSKNCLPNEALKLFSEMMQKS-KPDSMTIASILPACASLAAL 523
Query: 583 DEG 591
+ G
Sbjct: 524 NRG 526
Score = 127 bits (319), Expect = 6e-27
Identities = 72/217 (33%), Positives = 114/217 (52%), Gaps = 9/217 (4%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
Y+ + S V N+LM Y K + A V +++ +D++SWN+MI Y N +
Sbjct: 230 YLYKLGFGSDNTVGNSLMAFYFKNRRIESACKVFDELCDRDVISWNSMISAYVSNGLAEK 289
Query: 184 ALNLFVAMLQ-ELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
+ +F M+ ++ D T+ +L AC + L GR +H Y ++ SF D N V+D
Sbjct: 290 GVEIFRQMVSLGIDVDLATIINVLMACVAGGNLSLGRALHAYAIKASFDEDVMFCNNVLD 349
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY+KCG L A +F + + ++SWT MIAG+ G EAI F++M + GV PD +
Sbjct: 350 MYSKCGDLSSAIQVFKKMGERSVVSWTSMIAGHIREGLSDEAIGLFSEMERDGVNPDAYT 409
Query: 541 FISVLYACSHSGLVDEGWRFFNLMR--------YECN 627
S+L+AC+ SG + +G N ++ Y CN
Sbjct: 410 ITSILHACASSGSLKKGRDIHNYIKEHGMDSSLYVCN 446
Score = 104 bits (260), Expect = 4e-20
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 2/197 (1%)
Frame = +1
Query: 7 IKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEA 186
I +N +++ + L+ MY KCG + +A V +++ + WN MI Y+K E
Sbjct: 130 ICDNGVEADGQLGAKLVFMYVKCGDLREARRVFDKLSNGKVFVWNLMINEYAKVRNFREG 189
Query: 187 LNLFVAMLQEL--EPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
+ LF M QEL + +S T +C+L ++L + G IHGY+ + F SD V N+++
Sbjct: 190 VYLFGKM-QELGIQANSYTFSCVLKCFSALGCVREGEWIHGYLYKLGFGSDNTVGNSLMA 248
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
Y K + A +FD + +D+ISW MI+ Y +G + + F M G++ D +
Sbjct: 249 FYFKNRRIESACKVFDELCDRDVISWNSMISAYVSNGLAEKGVEIFRQMVSLGIDVDLAT 308
Query: 541 FISVLYACSHSGLVDEG 591
I+VL AC G + G
Sbjct: 309 IINVLMACVAGGNLSLG 325
Score = 66.6 bits (161), Expect = 1e-08
Identities = 42/151 (27%), Positives = 70/151 (46%)
Frame = +1
Query: 139 NTMIGGYSKNSCPNEALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRH 318
N I Y + A+ + V+ Q E D ++ CA + +L+ G+++H I +
Sbjct: 75 NAKINKYCEMGNLKSAMEM-VSGAQIFELDLEAYCSVVELCAGMMSLQDGKKVHSVICDN 133
Query: 319 SFSSDRNVVNAVIDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATF 498
+D + ++ MY KCG L AR +FD + + W +MI Y RE + F
Sbjct: 134 GVEADGQLGAKLVFMYVKCGDLREARRVFDKLSNGKVFVWNLMINEYAKVRNFREGVYLF 193
Query: 499 NDMRQAGVEPDDVSFISVLYACSHSGLVDEG 591
M++ G++ + +F VL S G V EG
Sbjct: 194 GKMQELGIQANSYTFSCVLKCFSALGCVREG 224
>ref|XP_008366040.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Malus domestica]
Length = 877
Score = 344 bits (882), Expect = 3e-92
Identities = 162/220 (73%), Positives = 188/220 (85%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
YIKE+ M SSLYV N LMDMYAKCGSM DA SV ++MP KDIVSWNTMIGGYSKN PNE
Sbjct: 430 YIKEHGMDSSLYVCNTLMDMYAKCGSMEDAHSVFSRMPAKDIVSWNTMIGGYSKNCLPNE 489
Query: 184 ALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDM 363
AL LF M+Q+ +PDS+T+A +LPACASLAAL RG+EIHG+ILR+ + S+R+V NA++DM
Sbjct: 490 ALKLFSEMMQKSKPDSMTIASVLPACASLAALNRGQEIHGHILRNGYFSERHVANALVDM 549
Query: 364 YAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSF 543
Y KCGVLVLARLLFD IP KDLISWT++ AGYGMHGFGREAIA FN+MR+AG+EPD VSF
Sbjct: 550 YVKCGVLVLARLLFDXIPVKDLISWTVIXAGYGMHGFGREAIAAFNEMRKAGIEPDSVSF 609
Query: 544 ISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
IS+LYACSHSGL DE WRFF+ MR + + PKLEHYACMV
Sbjct: 610 ISILYACSHSGLXDEAWRFFDTMRNDYGIVPKLEHYACMV 649
Score = 147 bits (372), Expect = 4e-33
Identities = 73/183 (39%), Positives = 112/183 (61%), Gaps = 1/183 (0%)
Frame = +1
Query: 46 NALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-LE 222
N ++DMY+KCG ++ A V +M + +VSW +MI G+ + +EA+ LF M ++ +
Sbjct: 343 NNVLDMYSKCGDLSSAIQVFKKMGERSVVSWTSMIAGHIREGLSDEAIGLFSEMERDGVN 402
Query: 223 PDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLL 402
PD+ T+ IL ACAS +L++GR+IH YI H S V N ++DMYAKCG + A +
Sbjct: 403 PDAYTITSILHACASSGSLKKGRDIHNYIKEHGMDSSLYVCNTLMDMYAKCGSMEDAHSV 462
Query: 403 FDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGLV 582
F +PAKD++SW MI GY + EA+ F++M Q +PD ++ SVL AC+ +
Sbjct: 463 FSRMPAKDIVSWNTMIGGYSKNCLPNEALKLFSEMMQKS-KPDSMTIASVLPACASLAAL 521
Query: 583 DEG 591
+ G
Sbjct: 522 NRG 524
Score = 128 bits (322), Expect = 3e-27
Identities = 72/217 (33%), Positives = 114/217 (52%), Gaps = 9/217 (4%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
Y+ + S V N+LM Y K + A V +++ +D++SWN+MI Y N +
Sbjct: 228 YLYKLGFGSDNTVGNSLMAFYFKNRRIEXARKVFDELCDRDVISWNSMISAYVSNGLAEK 287
Query: 184 ALNLFVAMLQ-ELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
+ +F M+ ++ D T+ +L AC + L GR +H Y ++ SF D N V+D
Sbjct: 288 GVEIFRQMVSLGIDVDLATIINVLMACVAGGNLSLGRALHAYAIKASFDEDVMFCNNVLD 347
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY+KCG L A +F + + ++SWT MIAG+ G EAI F++M + GV PD +
Sbjct: 348 MYSKCGDLSSAIQVFKKMGERSVVSWTSMIAGHIREGLSDEAIGLFSEMERDGVNPDAYT 407
Query: 541 FISVLYACSHSGLVDEGWRFFNLMR--------YECN 627
S+L+AC+ SG + +G N ++ Y CN
Sbjct: 408 ITSILHACASSGSLKKGRDIHNYIKEHGMDSSLYVCN 444
Score = 108 bits (269), Expect = 4e-21
Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
Frame = +1
Query: 7 IKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEA 186
I +N +++ + L+ MY KCG + +A V +++ + WN MI Y+K E
Sbjct: 128 ICDNGVEADGQLGAKLVFMYVKCGDLREARRVFDKLSNGKVFVWNLMINEYAKVRNFREG 187
Query: 187 LNLFVAMLQEL--EPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
+ LF M QEL + +S T +C+L ++L + G IHGY+ + F SD V N+++
Sbjct: 188 VYLFGKM-QELGIQANSYTFSCVLKCFSALGCVREGEWIHGYLYKLGFGSDNTVGNSLMA 246
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
Y K + AR +FD + +D+ISW MI+ Y +G + + F M G++ D +
Sbjct: 247 FYFKNRRIEXARKVFDELCDRDVISWNSMISAYVSNGLAEKGVEIFRQMVSLGIDVDLAT 306
Query: 541 FISVLYACSHSGLVDEG 591
I+VL AC G + G
Sbjct: 307 IINVLMACVAGGNLSLG 323
Score = 67.0 bits (162), Expect = 1e-08
Identities = 42/158 (26%), Positives = 72/158 (45%)
Frame = +1
Query: 118 VKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQELEPDSVTMACILPACASLAALERGREI 297
+ + N I Y + A+ + V+ Q+ E D ++ CA + +L+ G+ +
Sbjct: 66 ITGVADKNAKINKYCEMGNLKSAMEM-VSGAQKSELDLEAYCSVVELCAGMMSLQDGKXV 124
Query: 298 HGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFG 477
H I + +D + ++ MY KCG L AR +FD + + W +MI Y
Sbjct: 125 HSVICDNGVEADGQLGAKLVFMYVKCGDLREARRVFDKLSNGKVFVWNLMINEYAKVRNF 184
Query: 478 REAIATFNDMRQAGVEPDDVSFISVLYACSHSGLVDEG 591
RE + F M++ G++ + +F VL S G V EG
Sbjct: 185 REGVYLFGKMQELGIQANSYTFSCVLKCFSALGCVREG 222
>ref|XP_012092429.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein DOT4, chloroplastic [Jatropha curcas]
Length = 876
Score = 343 bits (880), Expect = 5e-92
Identities = 161/220 (73%), Positives = 189/220 (85%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
YI+ N ++S+L+V N+L+DMYAKCGSM DA V +MPVKDI+SWNTMIGGYSKN PNE
Sbjct: 425 YIRRNGLESNLFVCNSLVDMYAKCGSMEDANLVFLKMPVKDIISWNTMIGGYSKNGVPNE 484
Query: 184 ALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDM 363
AL+LFVAMLQEL+PD TMACILPA ASLAAL+RG+EIH YILR+ + ++V NA+IDM
Sbjct: 485 ALSLFVAMLQELKPDGRTMACILPAFASLAALDRGKEIHAYILRNGYFFYQHVANALIDM 544
Query: 364 YAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSF 543
Y KCG L L+RLLFDMIP KDLISWT+MI GYGMHGFG+EAIA FN MR +G EPD V F
Sbjct: 545 YVKCGSLALSRLLFDMIPMKDLISWTVMITGYGMHGFGKEAIAVFNKMRLSGSEPDKVDF 604
Query: 544 ISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
IS+LYACSHSGL+DEGWRFFN+M++ CN+EPKLEHYACMV
Sbjct: 605 ISMLYACSHSGLLDEGWRFFNIMQHXCNIEPKLEHYACMV 644
Score = 138 bits (347), Expect = 3e-30
Identities = 72/184 (39%), Positives = 110/184 (59%), Gaps = 1/184 (0%)
Frame = +1
Query: 43 SNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-L 219
+N L+DMY+KC ++ +A V +M K IVSW ++I GY++ +A+ LF M E +
Sbjct: 337 ANTLLDMYSKCSNLDNAIQVFEKMDEKSIVSWTSLISGYAREGLSEQAIRLFHEMESEGV 396
Query: 220 EPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARL 399
PD T+ +L ACA +LE G+++H YI R+ S+ V N+++DMYAKCG + A L
Sbjct: 397 RPDIFTITMVLHACACDGSLEIGKDVHNYIRRNGLESNLFVCNSLVDMYAKCGSMEDANL 456
Query: 400 LFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGL 579
+F +P KD+ISW MI GY +G EA++ F M Q ++PD + +L A +
Sbjct: 457 VFLKMPVKDIISWNTMIGGYSKNGVPNEALSLFVAMLQE-LKPDGRTMACILPAFASLAA 515
Query: 580 VDEG 591
+D G
Sbjct: 516 LDRG 519
Score = 115 bits (287), Expect = 3e-23
Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 1/193 (0%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ-E 216
V N+L+ Y K + +A + +++ +DI+S N+MI G+ N+ P + L +F ML
Sbjct: 235 VVNSLITFYFKIRKVENAHKLFDEVSDRDIISRNSMISGFVANNLPEKGLMVFKEMLHLG 294
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLAR 396
+ D T+ +LPACA+ + R +H ++ N ++DMY+KC L A
Sbjct: 295 VRMDLATIVSVLPACANCGNVLVRRVVHASAIKAGLGRRMTFANTLLDMYSKCSNLDNAI 354
Query: 397 LLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
+F+ + K ++SWT +I+GY G +AI F++M GV PD + VL+AC+ G
Sbjct: 355 QVFEKMDEKSIVSWTSLISGYAREGLSEQAIRLFHEMESEGVRPDIFTITMVLHACACDG 414
Query: 577 LVDEGWRFFNLMR 615
++ G N +R
Sbjct: 415 SLEIGKDVHNYIR 427
Score = 105 bits (263), Expect = 2e-20
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 1/193 (0%)
Frame = +1
Query: 7 IKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEA 186
I N + + + L+ MY CG + + +++ ++ WN M+ GY+K E+
Sbjct: 123 ICSNGVPTDGVLGRKLVFMYVNCGDIRQGRPIFDKIXKXEVFLWNLMLSGYAKIDDFEES 182
Query: 187 LNLFVAMLQ-ELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDM 363
L LF ML +E +S T +CIL A+L +++ G HG++L+ F S VVN++I
Sbjct: 183 LYLFRKMLALGIEMNSHTFSCILKCFAALGSVKEGEWTHGFLLKLGFGSYNTVVNSLITF 242
Query: 364 YAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSF 543
Y K + A LFD + +D+IS MI+G+ + + + F +M GV D +
Sbjct: 243 YFKIRKVENAHKLFDEVSDRDIISRNSMISGFVANNLPEKGLMVFKEMLHLGVRMDLATI 302
Query: 544 ISVLYACSHSGLV 582
+SVL AC++ G V
Sbjct: 303 VSVLPACANCGNV 315
Score = 66.2 bits (160), Expect = 2e-08
Identities = 35/126 (27%), Positives = 63/126 (50%)
Frame = +1
Query: 214 ELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLA 393
++E ++ T IL CA L +L+ G+++H I + +D + ++ MY CG +
Sbjct: 92 KMEIETRTYCSILQLCAELKSLQDGKQVHSIICSNGVPTDGVLGRKLVFMYVNCGDIRQG 151
Query: 394 RLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHS 573
R +FD I ++ W +M++GY E++ F M G+E + +F +L +
Sbjct: 152 RPIFDKIXKXEVFLWNLMLSGYAKIDDFEESLYLFRKMLALGIEMNSHTFSCILKCFAAL 211
Query: 574 GLVDEG 591
G V EG
Sbjct: 212 GSVKEG 217
>ref|XP_011657608.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Cucumis sativus]
gi|700210517|gb|KGN65613.1| hypothetical protein
Csa_1G470290 [Cucumis sativus]
Length = 871
Score = 342 bits (877), Expect = 1e-91
Identities = 154/221 (69%), Positives = 187/221 (84%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
+YI+EN+++++ +VSNAL DMYAKCGSM DA V + M KD++SWNTMIGGY+KNS PN
Sbjct: 423 DYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPN 482
Query: 181 EALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
EAL LF M +E +PD T+ACILPACASLAAL++GREIHGY LR+ +S D+ V NAV+D
Sbjct: 483 EALTLFAEMQRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVD 542
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY KCG+LVLAR LFDMIP KDL+SWT+MIAGYGMHG+G EAI TFN MR G+EPD+VS
Sbjct: 543 MYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVS 602
Query: 541 FISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
FIS+LYACSHSGL+DEGW+ FN+M+ EC +EP LEHYACMV
Sbjct: 603 FISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMV 643
Score = 124 bits (312), Expect = 4e-26
Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 1/196 (0%)
Frame = +1
Query: 7 IKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEA 186
IK + + +N L+DMY+KCG + A V +M K +VSW +MI GY + + A
Sbjct: 324 IKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGA 383
Query: 187 LNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDM 363
+ LF M + PD + IL ACA L+ G+ +H YI ++ ++ V NA+ DM
Sbjct: 384 IKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDM 443
Query: 364 YAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSF 543
YAKCG + A +F + KD+ISW MI GY + EA+ F +M++ +PD +
Sbjct: 444 YAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTV 502
Query: 544 ISVLYACSHSGLVDEG 591
+L AC+ +D+G
Sbjct: 503 ACILPACASLAALDKG 518
Score = 118 bits (295), Expect = 4e-24
Identities = 69/201 (34%), Positives = 114/201 (56%), Gaps = 3/201 (1%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ-E 216
V N+L+ Y + A+ + +++ +D++SWN+MI GY KN + + +F+ ML
Sbjct: 233 VVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFG 292
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNV--VNAVIDMYAKCGVLVL 390
++ D TM + ACA++ L G+ +H Y ++ + + DR V N ++DMY+KCG L
Sbjct: 293 VDIDLATMVNVFVACANIGTLLLGKVLHSYSIK-AATLDREVRFNNTLLDMYSKCGDLNS 351
Query: 391 ARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSH 570
A +F+ + K ++SWT MI GY G AI F++M+ GV PD + S+L AC+
Sbjct: 352 AIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAI 411
Query: 571 SGLVDEGWRFFNLMRYECNLE 633
+G + G + +R E NLE
Sbjct: 412 NGNLKSGKIVHDYIR-ENNLE 431
Score = 113 bits (283), Expect = 9e-23
Identities = 63/176 (35%), Positives = 99/176 (56%), Gaps = 1/176 (0%)
Frame = +1
Query: 52 LMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ-ELEPD 228
L+ MY KCG + + V +++ I WN MI YS + E++NLF ML+ ++P+
Sbjct: 136 LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPN 195
Query: 229 SVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLLFD 408
S T + IL A++A +E GR++HG I + F+S VVN++I Y + A+ LFD
Sbjct: 196 SYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFD 255
Query: 409 MIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
+ +D+ISW MI+GY +G I F M GV+ D + ++V AC++ G
Sbjct: 256 ELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIG 311
Score = 61.6 bits (148), Expect = 4e-07
Identities = 35/122 (28%), Positives = 58/122 (47%)
Frame = +1
Query: 247 ILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLLFDMIPAKD 426
IL CA ++ GR + I D + ++ MY KCG L R++FD +
Sbjct: 101 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 160
Query: 427 LISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGLVDEGWRFFN 606
+ W +MI+ Y G E+I F M + G++P+ +F S+L + V+EG +
Sbjct: 161 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 220
Query: 607 LM 612
L+
Sbjct: 221 LI 222
>ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315860|gb|EFH46283.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 871
Score = 340 bits (871), Expect = 6e-91
Identities = 156/223 (69%), Positives = 193/223 (86%), Gaps = 2/223 (0%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
E+IKENDM ++VSNALMDMYAKCGSM +AE V ++M VKDI+SWNT+IGGYSKN N
Sbjct: 421 EWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYAN 480
Query: 181 EALNLFVAMLQE--LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAV 354
EAL+LF +L E PD T+AC+LPACASL+A ++GREIHGYI+R+ + SDR+V N++
Sbjct: 481 EALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL 540
Query: 355 IDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDD 534
+DMYAKCG L+LARLLFD I +KDL+SWT+MIAGYGMHGFG+EAIA FN MRQAG+EPD+
Sbjct: 541 VDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDE 600
Query: 535 VSFISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
+SF+S+LYACSHSGLVDEGWRFFN+MR+EC +EP +EHYAC+V
Sbjct: 601 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Score = 130 bits (327), Expect = 7e-28
Identities = 66/199 (33%), Positives = 110/199 (55%), Gaps = 1/199 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
YI ++ V N+L+ Y K + A V ++M +D++SWN++I GY N +
Sbjct: 220 YILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 184 ALNLFVAML-QELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
L++FV ML +E D T+ + CA + GR +H + ++ FS + N ++D
Sbjct: 280 GLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLD 339
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY+KCG L A+++F + + ++S+T MIAGY G EA+ F +M + G+ PD +
Sbjct: 340 MYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 541 FISVLYACSHSGLVDEGWR 597
+VL C+ + L+DEG R
Sbjct: 400 VTAVLNCCARNRLLDEGKR 418
Score = 129 bits (323), Expect = 2e-27
Identities = 67/184 (36%), Positives = 105/184 (57%), Gaps = 2/184 (1%)
Frame = +1
Query: 46 NALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-LE 222
N L+DMY+KCG + A+ V +M + +VS+ +MI GY++ EA+ LF M +E +
Sbjct: 335 NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 223 PDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLL 402
PD T+ +L CA L+ G+ +H +I + D V NA++DMYAKCG + A L+
Sbjct: 395 PDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELV 454
Query: 403 FDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMR-QAGVEPDDVSFISVLYACSHSGL 579
F + KD+ISW +I GY + + EA++ FN + + PD+ + VL AC+
Sbjct: 455 FSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSA 514
Query: 580 VDEG 591
D+G
Sbjct: 515 FDKG 518
Score = 108 bits (271), Expect = 2e-21
Identities = 57/197 (28%), Positives = 106/197 (53%), Gaps = 1/197 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
+I+ N + + L MY CG + +A V +Q+ ++ + WN ++ +K+ +
Sbjct: 119 FIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSG 178
Query: 184 ALNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
++ LF M+ +E DS T +C+ + +SL ++ G ++HGYIL+ F +V N+++
Sbjct: 179 SIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVA 238
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
Y K + AR +FD + +D+ISW +I GY +G + ++ F M +G+E D +
Sbjct: 239 FYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLAT 298
Query: 541 FISVLYACSHSGLVDEG 591
+SV C+ S L+ G
Sbjct: 299 IVSVFAGCADSRLISLG 315
Score = 58.2 bits (139), Expect = 4e-06
Identities = 35/122 (28%), Positives = 57/122 (46%)
Frame = +1
Query: 226 DSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLLF 405
D T+ +L CA +L+ G+E+ +I + F D N+ + + MY CG L A +F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152
Query: 406 DMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGLVD 585
D + + + W I++ G +I F M +GVE D +F V + S V+
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVN 212
Query: 586 EG 591
G
Sbjct: 213 GG 214
>ref|XP_010518818.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Tarenaya hassleriana]
Length = 872
Score = 339 bits (870), Expect = 8e-91
Identities = 156/223 (69%), Positives = 191/223 (85%), Gaps = 2/223 (0%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
++I+ENDM L+VSNALMDMYAKCGSM +A V ++MPVKDIVSWNT+IGGYSKN N
Sbjct: 422 DWIRENDMDFDLFVSNALMDMYAKCGSMEEARLVFSEMPVKDIVSWNTVIGGYSKNCFAN 481
Query: 181 EALNLFVAMLQELE--PDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAV 354
EAL+LF AML+E + PD TM C+LPACAS+AA ++GREIH YI+R+ + SDR+V N++
Sbjct: 482 EALSLFSAMLEECQSRPDERTMVCVLPACASVAAFDKGREIHSYIMRNRYFSDRHVANSL 541
Query: 355 IDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDD 534
+DMYAKCG L ARLLFD I +KDL+SWT+MIAGYGMHGFG EAI FN+MR+AG+EPD+
Sbjct: 542 VDMYAKCGALKFARLLFDDIVSKDLVSWTVMIAGYGMHGFGNEAIDMFNEMRKAGIEPDE 601
Query: 535 VSFISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
+SF+SVLYACSHSGL+DEGWRFFN+MR+EC +EP LEHYACMV
Sbjct: 602 ISFVSVLYACSHSGLLDEGWRFFNIMRHECKIEPTLEHYACMV 644
Score = 140 bits (354), Expect = 5e-31
Identities = 71/184 (38%), Positives = 108/184 (58%), Gaps = 2/184 (1%)
Frame = +1
Query: 46 NALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-LE 222
N L+DMY+KCG + A++V QM + VS+ +MI GY++ EA+ LF M +E +
Sbjct: 336 NTLLDMYSKCGDLGSAKAVFEQMSDRSAVSYTSMIAGYAREGLAGEAVKLFSEMEKEGIS 395
Query: 223 PDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLL 402
PD T+ +L CA LE G ++H +I + D V NA++DMYAKCG + ARL+
Sbjct: 396 PDVYTVTAVLNCCARNGLLEEGGQVHDWIRENDMDFDLFVSNALMDMYAKCGSMEEARLV 455
Query: 403 FDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDM-RQAGVEPDDVSFISVLYACSHSGL 579
F +P KD++SW +I GY + F EA++ F+ M + PD+ + + VL AC+
Sbjct: 456 FSEMPVKDIVSWNTVIGGYSKNCFANEALSLFSAMLEECQSRPDERTMVCVLPACASVAA 515
Query: 580 VDEG 591
D+G
Sbjct: 516 FDKG 519
Score = 135 bits (339), Expect = 3e-29
Identities = 67/193 (34%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
Frame = +1
Query: 40 VSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE- 216
V N+LM Y K G + A + ++M +D++SWN+MI GY N + L +FV ML
Sbjct: 233 VVNSLMASYLKNGRVESARRLFDEMTERDVISWNSMINGYISNGSAEQGLTIFVQMLLSG 292
Query: 217 LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLAR 396
L D TM + CA + GR +H + L+ F+ N ++DMY+KCG L A+
Sbjct: 293 LNVDLATMVSVFSGCADCRFISLGRAVHCFGLKTRFACKDRFCNTLLDMYSKCGDLGSAK 352
Query: 397 LLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSG 576
+F+ + + +S+T MIAGY G EA+ F++M + G+ PD + +VL C+ +G
Sbjct: 353 AVFEQMSDRSAVSYTSMIAGYAREGLAGEAVKLFSEMEKEGISPDVYTVTAVLNCCARNG 412
Query: 577 LVDEGWRFFNLMR 615
L++EG + + +R
Sbjct: 413 LLEEGGQVHDWIR 425
Score = 107 bits (266), Expect = 8e-21
Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
+I+ N + + L+ MY CG++ +A V + ++ + WN +I Y K E
Sbjct: 120 FIRANGFAIDANLGSKLVLMYVNCGNLREARRVFDLTRIEKTLFWNLLINEYVKTGDFRE 179
Query: 184 ALNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
++ LF ML +E D T + I + + L ++ G ++HGY+L+ F + +VVN+++
Sbjct: 180 SIGLFKKMLNSGIETDHYTFSSISKSLSVLGSVNGGEQLHGYVLKTGFGNYNSVVNSLMA 239
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
Y K G + AR LFD + +D+ISW MI GY +G + + F M +G+ D +
Sbjct: 240 SYLKNGRVESARRLFDEMTERDVISWNSMINGYISNGSAEQGLTIFVQMLLSGLNVDLAT 299
Query: 541 FISVLYACSHSGLVDEG 591
+SV C+ + G
Sbjct: 300 MVSVFSGCADCRFISLG 316
Score = 73.9 bits (180), Expect = 8e-11
Identities = 41/124 (33%), Positives = 65/124 (52%)
Frame = +1
Query: 220 EPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARL 399
E D T+ +L CA +L GRE+ +I + F+ D N+ + ++ MY CG L AR
Sbjct: 92 EIDPRTLCSMLQLCADSKSLNHGREVDSFIRANGFAIDANLGSKLVLMYVNCGNLREARR 151
Query: 400 LFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGL 579
+FD+ + + W ++I Y G RE+I F M +G+E D +F S+ + S G
Sbjct: 152 VFDLTRIEKTLFWNLLINEYVKTGDFRESIGLFKKMLNSGIETDHYTFSSISKSLSVLGS 211
Query: 580 VDEG 591
V+ G
Sbjct: 212 VNGG 215
>ref|XP_010496887.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Camelina sativa]
Length = 752
Score = 339 bits (870), Expect = 8e-91
Identities = 154/223 (69%), Positives = 194/223 (86%), Gaps = 2/223 (0%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
E+IKENDM ++VSNALMDMY+KCGSM +AE V ++M VKDI+SWNT+IGGYSKN N
Sbjct: 418 EWIKENDMGFDIFVSNALMDMYSKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYAN 477
Query: 181 EALNLFVAMLQE--LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAV 354
EAL+LF +L+E PD T+AC+LPACASL+A ++GREIHGYI+R+ + SDR+V N++
Sbjct: 478 EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL 537
Query: 355 IDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDD 534
+DMYAKCG L+LAR+LFD I +KDL+SWT+MIAGYGMHGFG+EAIA FN MRQAG+EPD+
Sbjct: 538 VDMYAKCGALLLARMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDE 597
Query: 535 VSFISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
+SF+S+LYACSHSGLVDEGWRFFN+MR+EC +EP +EHYAC+V
Sbjct: 598 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 640
Score = 132 bits (333), Expect = 1e-28
Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 1/199 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
YI ++ V N+L+ Y K + A V ++M +D++SWN++I GY N +
Sbjct: 217 YILKSGFGDRNSVGNSLVAFYLKNQRVDSARMVFDEMTERDVISWNSIINGYVSNGLAEQ 276
Query: 184 ALNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
L++FV ML +E D T+ + CA + + GR +H + L+ FS + N ++D
Sbjct: 277 GLSVFVKMLVSGVEIDLATIVSVFAGCADSSLISLGRAVHSFGLKACFSREDRFCNTLLD 336
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY+KCG L A+ +F + + ++S+T MIAGY G EA+ F M + G+ PD +
Sbjct: 337 MYSKCGDLDSAKAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFEQMEEEGISPDVYT 396
Query: 541 FISVLYACSHSGLVDEGWR 597
+VL CS + L+DEG R
Sbjct: 397 ITAVLNCCSRNRLLDEGKR 415
Score = 128 bits (322), Expect = 3e-27
Identities = 65/184 (35%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Frame = +1
Query: 46 NALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-LE 222
N L+DMY+KCG + A++V +M + +VS+ +MI GY++ EA+ LF M +E +
Sbjct: 332 NTLLDMYSKCGDLDSAKAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFEQMEEEGIS 391
Query: 223 PDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLL 402
PD T+ +L C+ L+ G+ +H +I + D V NA++DMY+KCG + A L+
Sbjct: 392 PDVYTITAVLNCCSRNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYSKCGSMREAELV 451
Query: 403 FDMIPAKDLISWTIMIAGYGMHGFGREAIATFN-DMRQAGVEPDDVSFISVLYACSHSGL 579
F + KD+ISW +I GY + + EA++ FN + + PD+ + VL AC+
Sbjct: 452 FSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 511
Query: 580 VDEG 591
D+G
Sbjct: 512 FDKG 515
Score = 108 bits (269), Expect = 4e-21
Identities = 58/197 (29%), Positives = 106/197 (53%), Gaps = 1/197 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
+I+ N + + L MY CG + +A V +Q+ ++ + WN ++ +K+ +
Sbjct: 116 FIRGNGFVIDSSLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSG 175
Query: 184 ALNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
++ LF M+ +E DS T +CI + +SL ++ G ++ GYIL+ F +V N+++
Sbjct: 176 SIGLFKKMMSSGVEMDSYTFSCISKSFSSLRSVNGGEQLLGYILKSGFGDRNSVGNSLVA 235
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
Y K + AR++FD + +D+ISW +I GY +G + ++ F M +GVE D +
Sbjct: 236 FYLKNQRVDSARMVFDEMTERDVISWNSIINGYVSNGLAEQGLSVFVKMLVSGVEIDLAT 295
Query: 541 FISVLYACSHSGLVDEG 591
+SV C+ S L+ G
Sbjct: 296 IVSVFAGCADSSLISLG 312
>ref|XP_010439814.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic [Camelina sativa]
Length = 869
Score = 339 bits (870), Expect = 8e-91
Identities = 154/223 (69%), Positives = 194/223 (86%), Gaps = 2/223 (0%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
E+IKENDM ++VSNALMDMY+KCGSM +AE V ++M VKDI+SWNT+IGGYSKN N
Sbjct: 419 EWIKENDMGFDIFVSNALMDMYSKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYAN 478
Query: 181 EALNLFVAMLQE--LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAV 354
EAL+LF +L+E PD T+AC+LPACASL+A ++GREIHGYI+R+ + SDR+V N++
Sbjct: 479 EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL 538
Query: 355 IDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDD 534
+DMYAKCG L+LAR+LFD I +KDL+SWT+MIAGYGMHGFG+EAIA FN MRQAG+EPD+
Sbjct: 539 VDMYAKCGALLLARMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDE 598
Query: 535 VSFISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
+SF+S+LYACSHSGLVDEGWRFFN+MR+EC +EP +EHYAC+V
Sbjct: 599 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 641
Score = 129 bits (324), Expect = 2e-27
Identities = 66/199 (33%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
YI ++ V N+L+ Y K + A V + M +D++SWN++I GY N +
Sbjct: 218 YILKSGFGDRNSVGNSLVAFYLKNQRVDSARKVFDGMTARDVISWNSIINGYVSNGLAEK 277
Query: 184 ALNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
L++FV ML +E D T+ + CA + GR +H + ++ +S + N ++D
Sbjct: 278 GLSVFVKMLVSGVEVDLATIVSVFAGCADSRLISLGRAVHSFGMKACYSREDRFCNTLLD 337
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY+KCG L A+ +F + + ++S+T MIAGY G EA+ F M + G+ PD +
Sbjct: 338 MYSKCGDLDSAKAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFEQMEEEGISPDVYT 397
Query: 541 FISVLYACSHSGLVDEGWR 597
+VL CS + L+DEG R
Sbjct: 398 VTAVLNCCSRNRLLDEGKR 416
Score = 128 bits (322), Expect = 3e-27
Identities = 65/184 (35%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Frame = +1
Query: 46 NALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-LE 222
N L+DMY+KCG + A++V +M + +VS+ +MI GY++ EA+ LF M +E +
Sbjct: 333 NTLLDMYSKCGDLDSAKAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFEQMEEEGIS 392
Query: 223 PDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLL 402
PD T+ +L C+ L+ G+ +H +I + D V NA++DMY+KCG + A L+
Sbjct: 393 PDVYTVTAVLNCCSRNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYSKCGSMREAELV 452
Query: 403 FDMIPAKDLISWTIMIAGYGMHGFGREAIATFN-DMRQAGVEPDDVSFISVLYACSHSGL 579
F + KD+ISW +I GY + + EA++ FN + + PD+ + VL AC+
Sbjct: 453 FSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 512
Query: 580 VDEG 591
D+G
Sbjct: 513 FDKG 516
Score = 108 bits (271), Expect = 2e-21
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 1/197 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
+I+ N + + L MY CG + A V +Q+ ++ + WN ++ +K+ +
Sbjct: 117 FIRGNGFLIDSSLGSKLALMYTNCGDLKQATRVFDQVKIEKPLFWNILMNELAKSGDFSG 176
Query: 184 ALNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
++ LF M+ +E DS T +CI + SL ++ G ++HGYIL+ F +V N+++
Sbjct: 177 SIGLFKKMMSSGVEMDSYTFSCISKSFLSLRSVNGGEQLHGYILKSGFGDRNSVGNSLVA 236
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
Y K + AR +FD + A+D+ISW +I GY +G + ++ F M +GVE D +
Sbjct: 237 FYLKNQRVDSARKVFDGMTARDVISWNSIINGYVSNGLAEKGLSVFVKMLVSGVEVDLAT 296
Query: 541 FISVLYACSHSGLVDEG 591
+SV C+ S L+ G
Sbjct: 297 IVSVFAGCADSRLISLG 313
>ref|XP_010451385.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic [Camelina sativa]
Length = 857
Score = 339 bits (869), Expect = 1e-90
Identities = 154/223 (69%), Positives = 194/223 (86%), Gaps = 2/223 (0%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
E+IKENDM ++VSNALMDMYAKCGSM +AE V ++M VKDI+SWNT+IGG+SKN N
Sbjct: 418 EWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGFSKNCYAN 477
Query: 181 EALNLFVAMLQE--LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAV 354
EAL+LF +L+E PD T+AC+LPACASL+A ++GREIHGYI+R+ + SDR+V N++
Sbjct: 478 EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL 537
Query: 355 IDMYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDD 534
+DMYAKCG L+LAR+LFD I +KDL+SWT+MIAGYGMHGFG+EAIA FN MRQAG+EPD+
Sbjct: 538 VDMYAKCGALLLARMLFDGIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDE 597
Query: 535 VSFISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
+SF+S+LYACSHSGLVDEGWRFFN+MR+EC +EP +EHYAC+V
Sbjct: 598 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 640
Score = 131 bits (330), Expect = 3e-28
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 1/199 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
YI ++ V N+L+ Y K + A V ++M +D++SWN++I GY N +
Sbjct: 217 YILKSGFGDQNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 276
Query: 184 ALNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
L++FV ML +E D T+ + CA + GR +H + ++ FS + N ++D
Sbjct: 277 GLSVFVKMLVSGVEIDLATIVSVFAGCADSRLISLGRAVHSFGVKACFSREDRFCNTLLD 336
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY+KCG L A+ +F + + ++S+T MIAGY G EA+ F +M + G+ PD +
Sbjct: 337 MYSKCGDLDSAKAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 396
Query: 541 FISVLYACSHSGLVDEGWR 597
+VL CS + L+DEG R
Sbjct: 397 VTAVLNCCSRNRLLDEGKR 415
Score = 128 bits (321), Expect = 4e-27
Identities = 65/184 (35%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Frame = +1
Query: 46 NALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQE-LE 222
N L+DMY+KCG + A++V +M + +VS+ +MI GY++ EA+ LF M +E +
Sbjct: 332 NTLLDMYSKCGDLDSAKAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 391
Query: 223 PDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLL 402
PD T+ +L C+ L+ G+ +H +I + D V NA++DMYAKCG + A L+
Sbjct: 392 PDVYTVTAVLNCCSRNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELV 451
Query: 403 FDMIPAKDLISWTIMIAGYGMHGFGREAIATFN-DMRQAGVEPDDVSFISVLYACSHSGL 579
F + KD+ISW +I G+ + + EA++ FN + + PD+ + VL AC+
Sbjct: 452 FSEMRVKDIISWNTVIGGFSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 511
Query: 580 VDEG 591
D+G
Sbjct: 512 FDKG 515
Score = 108 bits (271), Expect = 2e-21
Identities = 60/197 (30%), Positives = 106/197 (53%), Gaps = 1/197 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
+I+ N + + L MY CG + A V +Q+ ++ + WN ++ +K+ +
Sbjct: 116 FIRGNGFVIDSSLGSKLALMYTNCGDLKQATRVFDQVKIEKPLFWNILMNELAKSGDFSG 175
Query: 184 ALNLFVAMLQ-ELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
++ LF M+ +E DS T +CIL + +SL ++ G ++HGYIL+ F +V N+++
Sbjct: 176 SIVLFKKMMSLGVEMDSYTFSCILKSFSSLRSVNGGEQLHGYILKSGFGDQNSVGNSLVA 235
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
Y K + AR +FD + +D+ISW +I GY +G + ++ F M +GVE D +
Sbjct: 236 FYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVKMLVSGVEIDLAT 295
Query: 541 FISVLYACSHSGLVDEG 591
+SV C+ S L+ G
Sbjct: 296 IVSVFAGCADSRLISLG 312
>ref|XP_011461308.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic isoform X2 [Fragaria vesca subsp. vesca]
Length = 849
Score = 338 bits (868), Expect = 1e-90
Identities = 155/221 (70%), Positives = 192/221 (86%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
+YI+E+DM SSL+V N+LMDMYAKCGSM DA+SV + MP+KDIVSWNTMIGGYSKN PN
Sbjct: 422 KYIREHDMDSSLFVCNSLMDMYAKCGSMEDADSVFSHMPMKDIVSWNTMIGGYSKNCLPN 481
Query: 181 EALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
EAL LF M ++ +PDS+T+A +LPACASLAAL+RG+EIHGY+LRH + D+ V NA++D
Sbjct: 482 EALELFSDMQRKFKPDSMTLASVLPACASLAALDRGQEIHGYLLRHGYFLDQYVANALVD 541
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY KCGVL+LAR+LF+MIP KDLIS+T++IAGYGMHGFG+EAIA FN+M +A +EPD +S
Sbjct: 542 MYVKCGVLILARVLFEMIPVKDLISYTVIIAGYGMHGFGKEAIAAFNEMTKAEIEPDSIS 601
Query: 541 FISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
FIS+LYACSHSGLV EGWRFF++MR + +EP LEHYACMV
Sbjct: 602 FISILYACSHSGLVQEGWRFFDIMRNDYKIEPMLEHYACMV 642
Score = 145 bits (366), Expect = 2e-32
Identities = 74/197 (37%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
Y + + + N+++DMY+KCG ++DA V +M + ++SW +MI GY + + ++
Sbjct: 322 YAMKGGFDVDVALCNSVLDMYSKCGDLSDALRVFEKMGRRSVLSWTSMIAGYVREALSDK 381
Query: 184 ALNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
A+ LF M + + PD T+ IL ACA +LE+G++IH YI H S V N+++D
Sbjct: 382 AIELFCEMETDGVIPDVYTITSILHACACSGSLEKGKDIHKYIREHDMDSSLFVCNSLMD 441
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MYAKCG + A +F +P KD++SW MI GY + EA+ F+DM Q +PD ++
Sbjct: 442 MYAKCGSMEDADSVFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFSDM-QRKFKPDSMT 500
Query: 541 FISVLYACSHSGLVDEG 591
SVL AC+ +D G
Sbjct: 501 LASVLPACASLAALDRG 517
Score = 130 bits (326), Expect = 9e-28
Identities = 69/197 (35%), Positives = 110/197 (55%), Gaps = 1/197 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
Y+ + S V N+LM Y K G + A V + + +D+VSWN+MI Y N P +
Sbjct: 221 YLYKLRFGSDSNVVNSLMAFYFKNGRVESARKVFDALRERDVVSWNSMISAYVSNGAPEK 280
Query: 184 ALNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
+ +F M+ ++ D T+ +L AC+ + GR +HGY ++ F D + N+V+D
Sbjct: 281 GIEIFREMVWSGIDVDLATIINVLMACSDCGNVVLGRVVHGYAMKGGFDVDVALCNSVLD 340
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY+KCG L A +F+ + + ++SWT MIAGY +AI F +M GV PD +
Sbjct: 341 MYSKCGDLSDALRVFEKMGRRSVLSWTSMIAGYVREALSDKAIELFCEMETDGVIPDVYT 400
Query: 541 FISVLYACSHSGLVDEG 591
S+L+AC+ SG +++G
Sbjct: 401 ITSILHACACSGSLEKG 417
Score = 116 bits (291), Expect = 1e-23
Identities = 63/183 (34%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
Frame = +1
Query: 37 YVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ- 213
YV L+ MY CG + +A V + + + + WN MI Y+K E + LF M++
Sbjct: 131 YVGAKLVFMYVHCGDLREARRVFDALSDRKVFLWNLMINEYAKVRDFREGVCLFGKMVEC 190
Query: 214 ELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLA 393
+E +S T +C+ A+L + G +HGY+ + F SD NVVN+++ Y K G + A
Sbjct: 191 GVELNSYTFSCVFKCFAALGCVREGEWVHGYLYKLRFGSDSNVVNSLMAFYFKNGRVESA 250
Query: 394 RLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHS 573
R +FD + +D++SW MI+ Y +G + I F +M +G++ D + I+VL ACS
Sbjct: 251 RKVFDALRERDVVSWNSMISAYVSNGAPEKGIEIFREMVWSGIDVDLATIINVLMACSDC 310
Query: 574 GLV 582
G V
Sbjct: 311 GNV 313
Score = 64.7 bits (156), Expect = 5e-08
Identities = 37/122 (30%), Positives = 56/122 (45%)
Frame = +1
Query: 226 DSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLLF 405
DS +L CA +L+ G+ +H + H + D V ++ MY CG L AR +F
Sbjct: 94 DSAAYCSVLELCAGNKSLKDGKRVHSVLCEHGVNVDGYVGAKLVFMYVHCGDLREARRVF 153
Query: 406 DMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGLVD 585
D + + + W +MI Y RE + F M + GVE + +F V + G V
Sbjct: 154 DALSDRKVFLWNLMINEYAKVRDFREGVCLFGKMVECGVELNSYTFSCVFKCFAALGCVR 213
Query: 586 EG 591
EG
Sbjct: 214 EG 215
>ref|XP_011461307.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic isoform X1 [Fragaria vesca subsp. vesca]
Length = 870
Score = 338 bits (868), Expect = 1e-90
Identities = 155/221 (70%), Positives = 192/221 (86%)
Frame = +1
Query: 1 EYIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPN 180
+YI+E+DM SSL+V N+LMDMYAKCGSM DA+SV + MP+KDIVSWNTMIGGYSKN PN
Sbjct: 422 KYIREHDMDSSLFVCNSLMDMYAKCGSMEDADSVFSHMPMKDIVSWNTMIGGYSKNCLPN 481
Query: 181 EALNLFVAMLQELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
EAL LF M ++ +PDS+T+A +LPACASLAAL+RG+EIHGY+LRH + D+ V NA++D
Sbjct: 482 EALELFSDMQRKFKPDSMTLASVLPACASLAALDRGQEIHGYLLRHGYFLDQYVANALVD 541
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY KCGVL+LAR+LF+MIP KDLIS+T++IAGYGMHGFG+EAIA FN+M +A +EPD +S
Sbjct: 542 MYVKCGVLILARVLFEMIPVKDLISYTVIIAGYGMHGFGKEAIAAFNEMTKAEIEPDSIS 601
Query: 541 FISVLYACSHSGLVDEGWRFFNLMRYECNLEPKLEHYACMV 663
FIS+LYACSHSGLV EGWRFF++MR + +EP LEHYACMV
Sbjct: 602 FISILYACSHSGLVQEGWRFFDIMRNDYKIEPMLEHYACMV 642
Score = 145 bits (366), Expect = 2e-32
Identities = 74/197 (37%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
Y + + + N+++DMY+KCG ++DA V +M + ++SW +MI GY + + ++
Sbjct: 322 YAMKGGFDVDVALCNSVLDMYSKCGDLSDALRVFEKMGRRSVLSWTSMIAGYVREALSDK 381
Query: 184 ALNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
A+ LF M + + PD T+ IL ACA +LE+G++IH YI H S V N+++D
Sbjct: 382 AIELFCEMETDGVIPDVYTITSILHACACSGSLEKGKDIHKYIREHDMDSSLFVCNSLMD 441
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MYAKCG + A +F +P KD++SW MI GY + EA+ F+DM Q +PD ++
Sbjct: 442 MYAKCGSMEDADSVFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFSDM-QRKFKPDSMT 500
Query: 541 FISVLYACSHSGLVDEG 591
SVL AC+ +D G
Sbjct: 501 LASVLPACASLAALDRG 517
Score = 130 bits (326), Expect = 9e-28
Identities = 69/197 (35%), Positives = 110/197 (55%), Gaps = 1/197 (0%)
Frame = +1
Query: 4 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNE 183
Y+ + S V N+LM Y K G + A V + + +D+VSWN+MI Y N P +
Sbjct: 221 YLYKLRFGSDSNVVNSLMAFYFKNGRVESARKVFDALRERDVVSWNSMISAYVSNGAPEK 280
Query: 184 ALNLFVAMLQE-LEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVID 360
+ +F M+ ++ D T+ +L AC+ + GR +HGY ++ F D + N+V+D
Sbjct: 281 GIEIFREMVWSGIDVDLATIINVLMACSDCGNVVLGRVVHGYAMKGGFDVDVALCNSVLD 340
Query: 361 MYAKCGVLVLARLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVS 540
MY+KCG L A +F+ + + ++SWT MIAGY +AI F +M GV PD +
Sbjct: 341 MYSKCGDLSDALRVFEKMGRRSVLSWTSMIAGYVREALSDKAIELFCEMETDGVIPDVYT 400
Query: 541 FISVLYACSHSGLVDEG 591
S+L+AC+ SG +++G
Sbjct: 401 ITSILHACACSGSLEKG 417
Score = 116 bits (291), Expect = 1e-23
Identities = 63/183 (34%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
Frame = +1
Query: 37 YVSNALMDMYAKCGSMADAESVLNQMPVKDIVSWNTMIGGYSKNSCPNEALNLFVAMLQ- 213
YV L+ MY CG + +A V + + + + WN MI Y+K E + LF M++
Sbjct: 131 YVGAKLVFMYVHCGDLREARRVFDALSDRKVFLWNLMINEYAKVRDFREGVCLFGKMVEC 190
Query: 214 ELEPDSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLA 393
+E +S T +C+ A+L + G +HGY+ + F SD NVVN+++ Y K G + A
Sbjct: 191 GVELNSYTFSCVFKCFAALGCVREGEWVHGYLYKLRFGSDSNVVNSLMAFYFKNGRVESA 250
Query: 394 RLLFDMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHS 573
R +FD + +D++SW MI+ Y +G + I F +M +G++ D + I+VL ACS
Sbjct: 251 RKVFDALRERDVVSWNSMISAYVSNGAPEKGIEIFREMVWSGIDVDLATIINVLMACSDC 310
Query: 574 GLV 582
G V
Sbjct: 311 GNV 313
Score = 64.7 bits (156), Expect = 5e-08
Identities = 37/122 (30%), Positives = 56/122 (45%)
Frame = +1
Query: 226 DSVTMACILPACASLAALERGREIHGYILRHSFSSDRNVVNAVIDMYAKCGVLVLARLLF 405
DS +L CA +L+ G+ +H + H + D V ++ MY CG L AR +F
Sbjct: 94 DSAAYCSVLELCAGNKSLKDGKRVHSVLCEHGVNVDGYVGAKLVFMYVHCGDLREARRVF 153
Query: 406 DMIPAKDLISWTIMIAGYGMHGFGREAIATFNDMRQAGVEPDDVSFISVLYACSHSGLVD 585
D + + + W +MI Y RE + F M + GVE + +F V + G V
Sbjct: 154 DALSDRKVFLWNLMINEYAKVRDFREGVCLFGKMVECGVELNSYTFSCVFKCFAALGCVR 213
Query: 586 EG 591
EG
Sbjct: 214 EG 215