BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00002782
         (441 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO47969.1| hypothetical protein CISIN_1g006477mg [Citrus sin...    68   3e-09
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...    68   3e-09
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...    68   3e-09
ref|XP_011027887.1| PREDICTED: RNA polymerase-associated protein...    66   9e-09
ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein...    66   9e-09
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...    66   9e-09
ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein...    65   2e-08
ref|XP_009378467.1| PREDICTED: RNA polymerase-associated protein...    65   2e-08
ref|XP_008382360.1| PREDICTED: RNA polymerase-associated protein...    65   2e-08
ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ...    65   2e-08
ref|XP_010100559.1| RNA polymerase-associated protein RTF1-like ...    65   3e-08
ref|XP_011047833.1| PREDICTED: RNA polymerase-associated protein...    64   3e-08
ref|XP_011047832.1| PREDICTED: RNA polymerase-associated protein...    64   3e-08
ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein...    64   4e-08
ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    64   4e-08
ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein...    64   4e-08
ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein...    63   1e-07
ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein...    62   1e-07
ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein...    62   1e-07
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop...    62   1e-07

>gb|KDO47969.1| hypothetical protein CISIN_1g006477mg [Citrus sinensis]
           gi|641828832|gb|KDO47970.1| hypothetical protein
           CISIN_1g006477mg [Citrus sinensis]
          Length = 643

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGCQVPENDGRRHALTLTVGDYKRRRGLL
Sbjct: 613 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
           X1 [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
           PREDICTED: RNA polymerase-associated protein RTF1
           homolog isoform X2 [Citrus sinensis]
          Length = 643

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGCQVPENDGRRHALTLTVGDYKRRRGLL
Sbjct: 613 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
           gi|557524836|gb|ESR36142.1| hypothetical protein
           CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGCQVPENDGRRHALTLTVGDYKRRRGLL
Sbjct: 613 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_011027887.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Populus
           euphratica]
          Length = 662

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGC+VPENDGRRHALTLTVGDYKRRRGLL
Sbjct: 632 ATVGCRVPENDGRRHALTLTVGDYKRRRGLL 662


>ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Vitis
           vinifera]
          Length = 658

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGC+VPENDGRRHALTLTVGDYKRRRGLL
Sbjct: 628 ATVGCRVPENDGRRHALTLTVGDYKRRRGLL 658


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
           gi|222848649|gb|EEE86196.1| plus-3 domain-containing
           family protein [Populus trichocarpa]
          Length = 662

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGC+VPENDGRRHALTLTVGDYKRRRGLL
Sbjct: 632 ATVGCRVPENDGRRHALTLTVGDYKRRRGLL 662


>ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
           bretschneideri]
          Length = 657

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGCQVPENDGRRHALTLTV DYKRRRGLL
Sbjct: 627 ATVGCQVPENDGRRHALTLTVSDYKRRRGLL 657


>ref|XP_009378467.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
           bretschneideri]
          Length = 657

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGCQVPENDGRRHALTLTV DYKRRRGLL
Sbjct: 627 ATVGCQVPENDGRRHALTLTVSDYKRRRGLL 657


>ref|XP_008382360.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Malus
           domestica]
          Length = 657

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGCQVPENDGRRHALTLTV DYKRRRGLL
Sbjct: 627 ATVGCQVPENDGRRHALTLTVSDYKRRRGLL 657


>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
           gi|590624750|ref|XP_007025692.1| PAF1 complex component
           isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
           PAF1 complex component isoform 1 [Theobroma cacao]
           gi|508781058|gb|EOY28314.1| PAF1 complex component
           isoform 1 [Theobroma cacao]
          Length = 660

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGCQVPENDGRRHALTLTV DYKRRRGLL
Sbjct: 630 ATVGCQVPENDGRRHALTLTVSDYKRRRGLL 660


>ref|XP_010100559.1| RNA polymerase-associated protein RTF1-like protein [Morus
           notabilis] gi|587894274|gb|EXB82802.1| RNA
           polymerase-associated protein RTF1-like protein [Morus
           notabilis]
          Length = 658

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 29/31 (93%), Positives = 31/31 (100%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGC+VPENDGRRHALTL+VGDYKRRRGLL
Sbjct: 628 ATVGCRVPENDGRRHALTLSVGDYKRRRGLL 658


>ref|XP_011047833.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
           X2 [Populus euphratica] gi|743908750|ref|XP_011047834.1|
           PREDICTED: RNA polymerase-associated protein RTF1
           homolog isoform X2 [Populus euphratica]
           gi|743908752|ref|XP_011047836.1| PREDICTED: RNA
           polymerase-associated protein RTF1 homolog isoform X2
           [Populus euphratica]
          Length = 666

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGCQV ENDGRRHALTLTVGDYKRRRGLL
Sbjct: 636 ATVGCQVRENDGRRHALTLTVGDYKRRRGLL 666


>ref|XP_011047832.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
           X1 [Populus euphratica]
          Length = 695

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGCQV ENDGRRHALTLTVGDYKRRRGLL
Sbjct: 665 ATVGCQVRENDGRRHALTLTVGDYKRRRGLL 695


>ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
           [Gossypium raimondii] gi|763802543|gb|KJB69481.1|
           hypothetical protein B456_011G025800 [Gossypium
           raimondii] gi|763802544|gb|KJB69482.1| hypothetical
           protein B456_011G025800 [Gossypium raimondii]
           gi|763802545|gb|KJB69483.1| hypothetical protein
           B456_011G025800 [Gossypium raimondii]
          Length = 660

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGC+VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 630 ATVGCRVPENDGRRHALTLTVSDYKRRRGLL 660


>ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           RTF1 homolog [Prunus mume]
          Length = 648

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGC+VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 618 ATVGCRVPENDGRRHALTLTVSDYKRRRGLL 648


>ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
           curcas] gi|643703874|gb|KDP20938.1| hypothetical protein
           JCGZ_21409 [Jatropha curcas]
          Length = 658

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGC+VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 628 ATVGCRVPENDGRRHALTLTVSDYKRRRGLL 658


>ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nelumbo
           nucifera]
          Length = 666

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGC+VPENDGRRH+LTLTV DYKRRRGLL
Sbjct: 636 ATVGCRVPENDGRRHSLTLTVSDYKRRRGLL 666


>ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
           [Nicotiana sylvestris]
          Length = 654

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGC+VPENDGRRHALTL+V DYKRRRGLL
Sbjct: 624 ATVGCRVPENDGRRHALTLSVSDYKRRRGLL 654


>ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
           [Nicotiana tomentosiformis]
          Length = 654

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           ATVGC+VPENDGRRHALTL+V DYKRRRGLL
Sbjct: 624 ATVGCRVPENDGRRHALTLSVSDYKRRRGLL 654


>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
           gi|550327599|gb|EEE97240.2| plus-3 domain-containing
           family protein [Populus trichocarpa]
          Length = 664

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 29/31 (93%), Positives = 29/31 (93%)
 Frame = -3

Query: 439 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 347
           A VGCQV ENDGRRHALTLTVGDYKRRRGLL
Sbjct: 634 ANVGCQVRENDGRRHALTLTVGDYKRRRGLL 664