BLASTX nr result

ID: Wisteria21_contig00031653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Wisteria21_contig00031653
         (354 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32401.2| Ribonuclease H [Medicago truncatula]                    60   4e-11
gb|AFK48593.1| unknown [Lotus japonicus]                               56   1e-08
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...    48   2e-07
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    57   5e-06

>gb|ABD32401.2| Ribonuclease H [Medicago truncatula]
          Length = 233

 Score = 60.1 bits (144), Expect(2) = 4e-11
 Identities = 34/64 (53%), Positives = 41/64 (64%)
 Frame = -3

Query: 193 YAPILLSIKDLLAQD*AVKLAHTLREGNTYADFMAKLGTSQDAKLVSYV*PPDGLASLLT 14
           YA ++ +IKDLL  D  + L HTLREGN  ADF AK G + DA LV +  PP  L  LL 
Sbjct: 164 YAALIQNIKDLL-NDRNISLHHTLREGNQCADFFAKFGANSDAALVVHQSPPADLLPLLR 222

Query: 13  ADAM 2
           ADA+
Sbjct: 223 ADAL 226



 Score = 34.3 bits (77), Expect(2) = 4e-11
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = -2

Query: 350 CVGNSGRVGLGGLLRHFDSEWISGFAGYIGFSIIYMLSSL 231
           C+G   R G GG+LR+    +ISGF+G I  S   +L+ L
Sbjct: 84  CIGTPPRTGYGGVLRNSAGLFISGFSGLIPNSADILLAEL 123


>gb|AFK48593.1| unknown [Lotus japonicus]
          Length = 272

 Score = 55.8 bits (133), Expect(2) = 1e-08
 Identities = 32/64 (50%), Positives = 39/64 (60%)
 Frame = -3

Query: 196 RYAPILLSIKDLLAQD*AVKLAHTLREGNTYADFMAKLGTSQDAKLVSYV*PPDGLASLL 17
           RYA ++  IKDL ++D  V+L HTLREGN  AD + K G  Q+  LV    P  GL  LL
Sbjct: 201 RYAALVWDIKDLQSRDWIVELRHTLREGNACADLLVKHGADQNDDLVITENPIAGLGVLL 260

Query: 16  TADA 5
            ADA
Sbjct: 261 LADA 264



 Score = 29.6 bits (65), Expect(2) = 1e-08
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -2

Query: 344 GNSGRVGLGGLLRHFDSEWISGFAGYIGFSIIYMLSSLLFYTG 216
           G   R G GG  R     W+ GF GY+    I  L  L  + G
Sbjct: 125 GTPQRGGFGGCFRTIHGNWLRGFFGYLDECCILHLELLGMFHG 167


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score = 47.8 bits (112), Expect(2) = 2e-07
 Identities = 27/63 (42%), Positives = 37/63 (58%)
 Frame = -3

Query: 193 YAPILLSIKDLLAQD*AVKLAHTLREGNTYADFMAKLGTSQDAKLVSYV*PPDGLASLLT 14
           +A ++  I+D L+      L HTLREGN  AD++AKLG   D  ++ +  PPD L  LL 
Sbjct: 800 HAALIQDIRDKLSLR-NFSLNHTLREGNQSADYLAKLGAMSDVNVLIHQSPPDELCPLLK 858

Query: 13  ADA 5
            DA
Sbjct: 859 NDA 861



 Score = 33.9 bits (76), Expect(2) = 2e-07
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -2

Query: 350 CVGNSGRVGLGGLLRHFDSEWISGFAGYIGFSIIYMLSSL 231
           C+G+  R G GGL+R+    ++SGF G++  S   +L+ L
Sbjct: 720 CIGSPIRAGFGGLIRNSVGFYLSGFLGFLPSSSDILLAEL 759


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 33/64 (51%), Positives = 41/64 (64%)
 Frame = -3

Query: 193 YAPILLSIKDLLAQD*AVKLAHTLREGNTYADFMAKLGTSQDAKLVSYV*PPDGLASLLT 14
           YA ++ +IKDLL+    + L HTLREGN  ADF AKLG + D  LV +  PP  L  LL 
Sbjct: 369 YAVLIQNIKDLLSVR-NITLHHTLREGNQCADFFAKLGANSDVHLVVHQSPPADLLPLLR 427

Query: 13  ADAM 2
           ADA+
Sbjct: 428 ADAI 431


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