BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Wisteria21_contig00024608
         (953 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004515176.1| PREDICTED: RNA pseudouridine synthase 3, mit...   555   e-155
ref|XP_013448024.1| RNA pseudouridine synthase [Medicago truncat...   539   e-150
ref|XP_007160970.1| hypothetical protein PHAVU_001G032500g [Phas...   534   e-149
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit...   523   e-146
ref|XP_014502865.1| PREDICTED: RNA pseudouridine synthase 3, mit...   522   e-145
gb|KOM48901.1| hypothetical protein LR48_Vigan07g260500 [Vigna a...   518   e-144
ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mit...   469   e-129
ref|XP_002267010.1| PREDICTED: RNA pseudouridine synthase 3, mit...   430   e-118
gb|KHN37004.1| RNA pseudourine synthase 3, mitochondrial [Glycin...   426   e-116
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              422   e-115
ref|XP_007023655.1| Pseudouridine synthase family protein [Theob...   414   e-113
ref|XP_010263262.1| PREDICTED: RNA pseudouridine synthase 3, mit...   413   e-112
gb|KGN63094.1| hypothetical protein Csa_2G402020 [Cucumis sativus]    412   e-112
ref|XP_011649894.1| PREDICTED: RNA pseudouridine synthase 3, mit...   412   e-112
ref|XP_008441208.1| PREDICTED: RNA pseudouridine synthase 3, mit...   409   e-111
ref|XP_008239134.1| PREDICTED: RNA pseudouridine synthase 3, mit...   401   e-109
ref|XP_010094671.1| RNA pseudourine synthase 3 [Morus notabilis]...   400   e-109
gb|KJB56432.1| hypothetical protein B456_009G119600 [Gossypium r...   400   e-109
gb|KJB56431.1| hypothetical protein B456_009G119600 [Gossypium r...   400   e-109
ref|XP_012444478.1| PREDICTED: RNA pseudouridine synthase 3, mit...   400   e-109

>ref|XP_004515176.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Cicer
           arietinum]
          Length = 479

 Score =  555 bits (1429), Expect = e-155
 Identities = 275/313 (87%), Positives = 288/313 (92%)
 Frame = -3

Query: 939 MLKRVSNNNSCSWLSSVGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLS 760
           MLK++SNNN CSWLSS+ VR YSRIRPP+PVSVEKVIRVSNNIARLDVPKEGPKPRQLLS
Sbjct: 1   MLKQMSNNNGCSWLSSI-VRHYSRIRPPKPVSVEKVIRVSNNIARLDVPKEGPKPRQLLS 59

Query: 759 LPPFPGHPFPGKNSISAPGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADD 580
           LPPFP HP PGKNS SAPG+ D VTAVNWIKYYFK T GSVIESHFREGLVQMEDLI DD
Sbjct: 60  LPPFPCHPLPGKNSTSAPGKRDHVTAVNWIKYYFKGTSGSVIESHFREGLVQMEDLIVDD 119

Query: 579 SFTQKVELMKPMRKIRPNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYL 400
           SF QK ELMKPMRKIRPNEVMK GARVHV VS+AET+IS+RFDPIPSGTL PNADEIKYL
Sbjct: 120 SFKQKKELMKPMRKIRPNEVMKPGARVHVSVSMAETKISKRFDPIPSGTLCPNADEIKYL 179

Query: 399 QRLAIYKDSAIIVLNKPPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSG 220
           QRL IYKDSAII+LNKPPKLPVKGNLPVHNSMD      LSYDYD+GPKLVHRLDRESSG
Sbjct: 180 QRLVIYKDSAIIMLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSG 239

Query: 219 IILLGRTKDSVSHLQWLFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAP 40
           I+LLGRTKDSVSHLQWLFSNINNTKSS KAWNDACE+TYQRYWALVIGTPKEKEGII+AP
Sbjct: 240 ILLLGRTKDSVSHLQWLFSNINNTKSSCKAWNDACESTYQRYWALVIGTPKEKEGIIHAP 299

Query: 39  LSKVRLNDGKTER 1
           LSKV LNDGKTER
Sbjct: 300 LSKVLLNDGKTER 312


>ref|XP_013448024.1| RNA pseudouridine synthase [Medicago truncatula]
           gi|657377131|gb|KEH22051.1| RNA pseudouridine synthase
           [Medicago truncatula]
          Length = 534

 Score =  539 bits (1388), Expect = e-150
 Identities = 265/316 (83%), Positives = 284/316 (89%)
 Frame = -3

Query: 948 SSSMLKRVSNNNSCSWLSSVGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQ 769
           S  MLKR+SNNN CSWLSS+ VR YSR+RPPRPVSV+KVIRVSNNIARLDVPK+GPKPRQ
Sbjct: 53  SFQMLKRMSNNNGCSWLSSL-VRYYSRVRPPRPVSVDKVIRVSNNIARLDVPKDGPKPRQ 111

Query: 768 LLSLPPFPGHPFPGKNSISAPGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLI 589
           LLSLPPFP HP PGKNS SAPG+ DRVTAVNWIKYYFK    SVIESHFREGLVQMEDLI
Sbjct: 112 LLSLPPFPSHPLPGKNSTSAPGERDRVTAVNWIKYYFKGVPSSVIESHFREGLVQMEDLI 171

Query: 588 ADDSFTQKVELMKPMRKIRPNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEI 409
           A DSF Q  EL+KPMRKI+PN+VMK G+RVHVPVSIAETRISRR+D IPSGTLYPNADEI
Sbjct: 172 AGDSFIQNKELLKPMRKIKPNDVMKPGSRVHVPVSIAETRISRRYDAIPSGTLYPNADEI 231

Query: 408 KYLQRLAIYKDSAIIVLNKPPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRE 229
           KYLQRL +YKD AIIVLNKPPKLPVKGNLPVHNSMD      LSYDYDEGPKLVHRLDRE
Sbjct: 232 KYLQRLVMYKDFAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRE 291

Query: 228 SSGIILLGRTKDSVSHLQWLFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGII 49
           +SGI+L+GRTKDSVSHLQWLFSN NN KSS KAWNDACEAT+QRYWALVIGTPKEKEG+I
Sbjct: 292 TSGILLMGRTKDSVSHLQWLFSNTNNAKSSCKAWNDACEATHQRYWALVIGTPKEKEGVI 351

Query: 48  NAPLSKVRLNDGKTER 1
           +APLSKV +ND KTER
Sbjct: 352 HAPLSKVLMNDRKTER 367


>ref|XP_007160970.1| hypothetical protein PHAVU_001G032500g [Phaseolus vulgaris]
           gi|561034434|gb|ESW32964.1| hypothetical protein
           PHAVU_001G032500g [Phaseolus vulgaris]
          Length = 480

 Score =  534 bits (1376), Expect = e-149
 Identities = 266/314 (84%), Positives = 279/314 (88%), Gaps = 1/314 (0%)
 Frame = -3

Query: 939 MLKRV-SNNNSCSWLSSVGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLL 763
           ML RV +NNNSCSWL  V VR YSRI+PPRPVSVE VIRVSNN+ARLD PKEGPKPRQLL
Sbjct: 1   MLNRVRNNNNSCSWLLFV-VRHYSRIQPPRPVSVEPVIRVSNNVARLDAPKEGPKPRQLL 59

Query: 762 SLPPFPGHPFPGKNSISAPGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIAD 583
           SLPPFPGHP P K+S S PGQ D VTAVNWIKYYFK   GSVIESHFREGLVQMED +  
Sbjct: 60  SLPPFPGHPLPAKSSTSDPGQRDYVTAVNWIKYYFKGAWGSVIESHFREGLVQMEDEVTA 119

Query: 582 DSFTQKVELMKPMRKIRPNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKY 403
           DS+TQK  LMKPMRKIRPNEVMKHGARVHVPVSIAETR+S+R+D IP GTLYPNADEIKY
Sbjct: 120 DSYTQKENLMKPMRKIRPNEVMKHGARVHVPVSIAETRVSKRYDAIPCGTLYPNADEIKY 179

Query: 402 LQRLAIYKDSAIIVLNKPPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESS 223
           LQRL IYKDSAIIVLNKPPKLPVKGNLPVHNSMD      LSYDYDEGPKLVHRLDRE+S
Sbjct: 180 LQRLVIYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRETS 239

Query: 222 GIILLGRTKDSVSHLQWLFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINA 43
           GI+LLGRTKDS SHLQWLF+NINN KSS KAWNDACEATYQRYWALVIGTPKEKEGII+A
Sbjct: 240 GILLLGRTKDSASHLQWLFTNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGIIHA 299

Query: 42  PLSKVRLNDGKTER 1
           PLSKV LNDGKTER
Sbjct: 300 PLSKVLLNDGKTER 313


>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Glycine max] gi|947056077|gb|KRH05530.1|
           hypothetical protein GLYMA_17G232000 [Glycine max]
          Length = 476

 Score =  523 bits (1347), Expect = e-146
 Identities = 266/313 (84%), Positives = 274/313 (87%)
 Frame = -3

Query: 939 MLKRVSNNNSCSWLSSVGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLS 760
           ML  VSNNNSCSWL  V  R YSRI+PPRPVSVE VI VSNNIARLD PKEGPKPRQLLS
Sbjct: 1   MLNHVSNNNSCSWLLFVA-RHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLS 59

Query: 759 LPPFPGHPFPGKNSISAPGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADD 580
           LPPFPGHP P K+SIS   Q D VTAVNWIKYYFK T GSVIESHFREGLVQME   ADD
Sbjct: 60  LPPFPGHPLPDKSSISGSRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQME---ADD 116

Query: 579 SFTQKVELMKPMRKIRPNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYL 400
           S TQK E MKPMRKIRPNEVMK GARVHVPVSI ETRIS+R+D IPSGTLYPNADEIKYL
Sbjct: 117 SSTQKEEQMKPMRKIRPNEVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYL 176

Query: 399 QRLAIYKDSAIIVLNKPPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSG 220
           QRL IYKDSAIIVLNKPPKLPVKG+LPVHNSMD      LSYDYDEGPKLVHRLDRESSG
Sbjct: 177 QRLVIYKDSAIIVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSG 236

Query: 219 IILLGRTKDSVSHLQWLFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAP 40
           I+LLGRTKDSVSHLQWLFSNINN KSS K WN+ACEATYQRYWALVIGTPKEKEGII+AP
Sbjct: 237 ILLLGRTKDSVSHLQWLFSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAP 296

Query: 39  LSKVRLNDGKTER 1
           LSKV LNDGKTER
Sbjct: 297 LSKVLLNDGKTER 309


>ref|XP_014502865.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Vigna
           radiata var. radiata]
          Length = 494

 Score =  522 bits (1344), Expect = e-145
 Identities = 263/317 (82%), Positives = 279/317 (88%), Gaps = 1/317 (0%)
 Frame = -3

Query: 948 SSSMLKRVSNN-NSCSWLSSVGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPR 772
           S  ML  VSNN NSC+ L  V VR YSRI+PPRPVSV+ VIRVSNNIARLD PKEGPKPR
Sbjct: 12  SVEMLNHVSNNSNSCTLLLFV-VRHYSRIQPPRPVSVKPVIRVSNNIARLDAPKEGPKPR 70

Query: 771 QLLSLPPFPGHPFPGKNSISAPGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDL 592
           QLLSLPPFPGHP P K+S S PGQ D VTAVNWIKYYFK T GSVIESHFREGLVQME L
Sbjct: 71  QLLSLPPFPGHPLPAKSSNSGPGQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEGL 130

Query: 591 IADDSFTQKVELMKPMRKIRPNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADE 412
           +A DS+T+K  LMK MRKIRPNEVM+HGARVHVPVSIAETRIS+R+D IP GTLYPNADE
Sbjct: 131 VAADSYTRKETLMKSMRKIRPNEVMEHGARVHVPVSIAETRISKRYDAIPCGTLYPNADE 190

Query: 411 IKYLQRLAIYKDSAIIVLNKPPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDR 232
           IKYLQRL IYKDSAIIVLNKPPKLPVKG+LPVHNSMD      LSYDYDEGPKLVHRLDR
Sbjct: 191 IKYLQRLVIYKDSAIIVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDR 250

Query: 231 ESSGIILLGRTKDSVSHLQWLFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGI 52
           E+SGI+LLGRTKDS SHLQWLF+NINN KSS KAWNDACEATYQRYWALVIGTPKEKEG+
Sbjct: 251 ETSGILLLGRTKDSASHLQWLFTNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGV 310

Query: 51  INAPLSKVRLNDGKTER 1
           I+APLSKV LNDGKTER
Sbjct: 311 IHAPLSKVLLNDGKTER 327


>gb|KOM48901.1| hypothetical protein LR48_Vigan07g260500 [Vigna angularis]
          Length = 494

 Score =  518 bits (1333), Expect = e-144
 Identities = 261/317 (82%), Positives = 278/317 (87%), Gaps = 1/317 (0%)
 Frame = -3

Query: 948 SSSMLKRVSNN-NSCSWLSSVGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPR 772
           S  ML  VSNN NSC+ L  V VR YSRI+PPRPVSV+ VIRVSNNIARLD PK+GPKPR
Sbjct: 12  SIKMLNHVSNNSNSCTLLLFV-VRHYSRIQPPRPVSVKPVIRVSNNIARLDAPKKGPKPR 70

Query: 771 QLLSLPPFPGHPFPGKNSISAPGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDL 592
           QLLSLPPFPGHP P K+S S PGQ D VTAVNWIKYYFK   GSVIESHFREGLVQME L
Sbjct: 71  QLLSLPPFPGHPLPAKSSNSGPGQRDYVTAVNWIKYYFKGIWGSVIESHFREGLVQMEGL 130

Query: 591 IADDSFTQKVELMKPMRKIRPNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADE 412
           +A DS+T+K  LMK MRKIRPNEVM+HGARVHVPVSIAETRIS+R+D IP GTLYPNADE
Sbjct: 131 VAADSYTRKDTLMKSMRKIRPNEVMEHGARVHVPVSIAETRISKRYDAIPCGTLYPNADE 190

Query: 411 IKYLQRLAIYKDSAIIVLNKPPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDR 232
           IKYLQRL IYKDSAIIVLNKPPKLPVKG+LPVHNSMD      LSYDYDEGPKLVHRLDR
Sbjct: 191 IKYLQRLVIYKDSAIIVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDR 250

Query: 231 ESSGIILLGRTKDSVSHLQWLFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGI 52
           E+SGI+LLGRTKDS SHLQWLF+NINN KSS KAWNDACEATYQRYWALVIGTPKEKEG+
Sbjct: 251 ETSGILLLGRTKDSASHLQWLFTNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGV 310

Query: 51  INAPLSKVRLNDGKTER 1
           I+APLSKV LNDGKTER
Sbjct: 311 IHAPLSKVLLNDGKTER 327


>ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X2 [Glycine max]
          Length = 449

 Score =  469 bits (1208), Expect = e-129
 Identities = 246/313 (78%), Positives = 253/313 (80%)
 Frame = -3

Query: 939 MLKRVSNNNSCSWLSSVGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLS 760
           ML  VSNNNSCSWL  V  R YSRI+PPRPVSVE VI VSNNIARLD PKEGPKPRQLLS
Sbjct: 1   MLNHVSNNNSCSWLLFVA-RHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLS 59

Query: 759 LPPFPGHPFPGKNSISAPGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADD 580
           LPPFPGHP P K+SIS   Q D VTAVNWIKYYFK T GSVIESHFREGLVQME   ADD
Sbjct: 60  LPPFPGHPLPDKSSISGSRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQME---ADD 116

Query: 579 SFTQKVELMKPMRKIRPNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYL 400
           S TQK E MKPMRKIRPNEVMK GARVHVPVSI ETRIS+R+D IPSGTLYPNADEIKYL
Sbjct: 117 SSTQKEEQMKPMRKIRPNEVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYL 176

Query: 399 QRLAIYKDSAIIVLNKPPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSG 220
           QRL IYKDSAIIVLNKPPKLPVK                           VHRLDRESSG
Sbjct: 177 QRLVIYKDSAIIVLNKPPKLPVK---------------------------VHRLDRESSG 209

Query: 219 IILLGRTKDSVSHLQWLFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAP 40
           I+LLGRTKDSVSHLQWLFSNINN KSS K WN+ACEATYQRYWALVIGTPKEKEGII+AP
Sbjct: 210 ILLLGRTKDSVSHLQWLFSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAP 269

Query: 39  LSKVRLNDGKTER 1
           LSKV LNDGKTER
Sbjct: 270 LSKVLLNDGKTER 282


>ref|XP_002267010.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Vitis
           vinifera]
          Length = 479

 Score =  430 bits (1105), Expect = e-118
 Identities = 208/305 (68%), Positives = 248/305 (81%)
 Frame = -3

Query: 915 NSCSWLSSVGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPGHP 736
           + C  L  V VR YSRI PPRP S   VIRVSNN+A+L  PKEGPKPRQLLSLPPFP HP
Sbjct: 7   HECQGLFPV-VRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHP 65

Query: 735 FPGKNSISAPGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADDSFTQKVEL 556
            PGK+ ++  G    VTA++WIKYYF    GSV++SHF +GLV ME    DDS  +K   
Sbjct: 66  LPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQ 125

Query: 555 MKPMRKIRPNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYLQRLAIYKD 376
           +KP+RKI+PNEVM+ G R++VPVS+AE RIS+RFD IPSGTL+PNADEI+YLQRL  YKD
Sbjct: 126 IKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLVTYKD 185

Query: 375 SAIIVLNKPPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIILLGRTK 196
            AI+VLNKPPK+P+KGNLPVHNSMD      L++DY+EGPKLVHRLDRESSG++L+GRTK
Sbjct: 186 PAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTK 245

Query: 195 DSVSHLQWLFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAPLSKVRLND 16
           +SV+HL WLFS+IN  KS SKAW+DACEAT QRYWALVIG+PK+KEG+I+APLSKV L+D
Sbjct: 246 ESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDD 305

Query: 15  GKTER 1
           GKTER
Sbjct: 306 GKTER 310


>gb|KHN37004.1| RNA pseudourine synthase 3, mitochondrial [Glycine soja]
          Length = 443

 Score =  426 bits (1095), Expect = e-116
 Identities = 230/319 (72%), Positives = 237/319 (74%), Gaps = 6/319 (1%)
 Frame = -3

Query: 939 MLKRVSNNNSCSWLSSVGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLS 760
           ML  VSNNNSCSWL  V  R YSRI+PPRPVSVE VI VSNNIARLD PKEGPKPRQLLS
Sbjct: 1   MLNHVSNNNSCSWLLFVA-RHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLS 59

Query: 759 LPPFPGHPFPGKNSISAPGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADD 580
           LPPFPGHP P K+SIS   Q D VTAVNWIKYYFK T GSVIESHFREGLVQME   ADD
Sbjct: 60  LPPFPGHPLPDKSSISGSRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQME---ADD 116

Query: 579 SFTQKVELMKPMRKIRPNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYL 400
           S TQK E MKPMRKIRPNEVMK GARVHVPVSI ETRIS+R+D IPSGTLYPNADEIKYL
Sbjct: 117 SSTQKEEQMKPMRKIRPNEVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYL 176

Query: 399 QRLAIYK------DSAIIVLNKPPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRL 238
           QRL IYK      DSAIIVLNKPPKLPVKG+LPVHNSMD      LSYDYDEGPKL    
Sbjct: 177 QRLVIYKACLSTSDSAIIVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKL---- 232

Query: 237 DRESSGIILLGRTKDSVSHLQWLFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKE 58
                                               WN+ACEATYQRYWALVIGTPKEKE
Sbjct: 233 -----------------------------------DWNEACEATYQRYWALVIGTPKEKE 257

Query: 57  GIINAPLSKVRLNDGKTER 1
           GII+APLSKV LNDGKTER
Sbjct: 258 GIIHAPLSKVLLNDGKTER 276


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  422 bits (1084), Expect = e-115
 Identities = 206/307 (67%), Positives = 249/307 (81%), Gaps = 2/307 (0%)
 Frame = -3

Query: 915 NSCSWLSSVGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPGHP 736
           + C  L  V VR YSRI PPRP S   VIRVSNN+A+L  PKEGPKPRQLLSLPPFP HP
Sbjct: 7   HECQGLFPV-VRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHP 65

Query: 735 FPGKNSISAPGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADDSFTQKVEL 556
            PGK+ ++  G    VTA++WIKYYF    GSV++SHF +GLV ME    DDS  +K   
Sbjct: 66  LPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQ 125

Query: 555 MKPMRKIRPNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYLQRLAI--Y 382
           +KP+RKI+PNEVM+ G R++VPVS+AE RIS+RFD IPSGTL+PNADEI+YLQRL +  +
Sbjct: 126 IKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLWLLKF 185

Query: 381 KDSAIIVLNKPPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIILLGR 202
           +D AI+VLNKPPK+P+KGNLPVHNSMD      L++DY+EGPKLVHRLDRESSG++L+GR
Sbjct: 186 QDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGR 245

Query: 201 TKDSVSHLQWLFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAPLSKVRL 22
           TK+SV+HL WLFS+IN  KS SKAW+DACEAT QRYWALVIG+PK+KEG+I+APLSKV L
Sbjct: 246 TKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLL 305

Query: 21  NDGKTER 1
           +DGKTER
Sbjct: 306 DDGKTER 312


>ref|XP_007023655.1| Pseudouridine synthase family protein [Theobroma cacao]
           gi|508779021|gb|EOY26277.1| Pseudouridine synthase
           family protein [Theobroma cacao]
          Length = 471

 Score =  414 bits (1065), Expect = e-113
 Identities = 203/295 (68%), Positives = 238/295 (80%)
 Frame = -3

Query: 885 VRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPGHPFPGKNSISAP 706
           VR YSR+ PP P   + V+RVSN++A L  PK+GPKPRQLLSLPPFPG+P PGKN    P
Sbjct: 14  VRHYSRVAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFPGYPLPGKN----P 69

Query: 705 GQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADDSFTQKVELMKPMRKIRPN 526
           G   RVTA++W+KYYF     S I+SHF +GLVQME   A D+  ++  LMKP+RKI+ N
Sbjct: 70  GGTARVTAISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLMKPLRKIKHN 129

Query: 525 EVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYLQRLAIYKDSAIIVLNKPP 346
           EVM+ G RV VPVSIAETRIS+RFD IPSGTLYPN DEI YLQRL  YKD AI+VLNKPP
Sbjct: 130 EVMEVGTRVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRLVKYKDYAILVLNKPP 189

Query: 345 KLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIILLGRTKDSVSHLQWLF 166
           KLPVKG+LPVHNSMD      LSYD+DEGPKLVHRLDRESSG++L+GRTK+SV+HL WLF
Sbjct: 190 KLPVKGSLPVHNSMDALAAAALSYDHDEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLF 249

Query: 165 SNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAPLSKVRLNDGKTER 1
           +++N  KSS KAWNDAC+  YQR+WALVIGTPKEKEG+I APLSK+ L+DGKTER
Sbjct: 250 NDLNTVKSSCKAWNDACDVKYQRFWALVIGTPKEKEGLICAPLSKILLDDGKTER 304


>ref|XP_010263262.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Nelumbo
           nucifera]
          Length = 474

 Score =  413 bits (1061), Expect = e-112
 Identities = 199/295 (67%), Positives = 235/295 (79%)
 Frame = -3

Query: 885 VRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPGHPFPGKNSISAP 706
           VR YSR+ PP P     VIRVSNNIARL  PKE PKPRQLLSLPPFPGHP PGK+S+S  
Sbjct: 14  VRHYSRVSPPSPARATSVIRVSNNIARLGCPKEDPKPRQLLSLPPFPGHPLPGKSSVSVA 73

Query: 705 GQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADDSFTQKVELMKPMRKIRPN 526
           GQ   VTA++W+KYYF    G VI+SHF +GLV+M      D   ++   M+ ++KI PN
Sbjct: 74  GQSAHVTAISWVKYYFDDIPGPVIQSHFNKGLVKMACPNPGDLLMEEQGQMQSLKKISPN 133

Query: 525 EVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYLQRLAIYKDSAIIVLNKPP 346
           EVM+ G+R++VPVS+ ET+IS+RFD IPSGTLYPNADEI+YLQRL +YKDSAIIVLNKPP
Sbjct: 134 EVMEVGSRIYVPVSVIETKISKRFDTIPSGTLYPNADEIEYLQRLVMYKDSAIIVLNKPP 193

Query: 345 KLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIILLGRTKDSVSHLQWLF 166
           KLPVKGNLPVHNSMD      LSY Y++GPKLVHRLDRESSG++L+GRTK+S++ L WLF
Sbjct: 194 KLPVKGNLPVHNSMDALAEAALSYGYEQGPKLVHRLDRESSGLLLMGRTKESIARLHWLF 253

Query: 165 SNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAPLSKVRLNDGKTER 1
           S++N  KS  K WNDACE T QRYWALVIG+P+EK+G I APLSKV LNDGKTER
Sbjct: 254 SDVNKAKSPLKTWNDACETTTQRYWALVIGSPREKQGRICAPLSKVLLNDGKTER 308


>gb|KGN63094.1| hypothetical protein Csa_2G402020 [Cucumis sativus]
          Length = 543

 Score =  412 bits (1060), Expect = e-112
 Identities = 200/297 (67%), Positives = 235/297 (79%)
 Frame = -3

Query: 891 VGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPGHPFPGKNSIS 712
           +  R YSRI PP P   + +IRVSNNIA+L  PKEGPK RQLLSLPPFPG+P PGKN + 
Sbjct: 83  LATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKNQVG 142

Query: 711 APGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADDSFTQKVELMKPMRKIR 532
             G+   VTA+ W+KYYF   + S I+SHFR+GLVQ+E          +   +KPMRKIR
Sbjct: 143 VSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVE--CPQLGGLDEKGNLKPMRKIR 200

Query: 531 PNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYLQRLAIYKDSAIIVLNK 352
             E+M+ GAR+H+PVS+AE +++RRFD IPSGTLYPNADEIKYLQRL  YKDSAIIVLNK
Sbjct: 201 SGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNK 260

Query: 351 PPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIILLGRTKDSVSHLQW 172
           PPKLPVKG LPVHNSMD      LSYDYD+GPKLVHRLDRESSGI+L+GRTK+SV HLQW
Sbjct: 261 PPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQW 320

Query: 171 LFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAPLSKVRLNDGKTER 1
           LFSNI N K + KAW +AC ATYQ+YWALVIG P+E+EG+I+APLSKV L+DGKTER
Sbjct: 321 LFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTER 377


>ref|XP_011649894.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
           [Cucumis sativus]
          Length = 471

 Score =  412 bits (1060), Expect = e-112
 Identities = 200/297 (67%), Positives = 235/297 (79%)
 Frame = -3

Query: 891 VGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPGHPFPGKNSIS 712
           +  R YSRI PP P   + +IRVSNNIA+L  PKEGPK RQLLSLPPFPG+P PGKN + 
Sbjct: 11  LATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKNQVG 70

Query: 711 APGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADDSFTQKVELMKPMRKIR 532
             G+   VTA+ W+KYYF   + S I+SHFR+GLVQ+E          +   +KPMRKIR
Sbjct: 71  VSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVE--CPQLGGLDEKGNLKPMRKIR 128

Query: 531 PNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYLQRLAIYKDSAIIVLNK 352
             E+M+ GAR+H+PVS+AE +++RRFD IPSGTLYPNADEIKYLQRL  YKDSAIIVLNK
Sbjct: 129 SGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNK 188

Query: 351 PPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIILLGRTKDSVSHLQW 172
           PPKLPVKG LPVHNSMD      LSYDYD+GPKLVHRLDRESSGI+L+GRTK+SV HLQW
Sbjct: 189 PPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQW 248

Query: 171 LFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAPLSKVRLNDGKTER 1
           LFSNI N K + KAW +AC ATYQ+YWALVIG P+E+EG+I+APLSKV L+DGKTER
Sbjct: 249 LFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTER 305


>ref|XP_008441208.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Cucumis
           melo]
          Length = 473

 Score =  409 bits (1052), Expect = e-111
 Identities = 203/297 (68%), Positives = 234/297 (78%)
 Frame = -3

Query: 891 VGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPGHPFPGKNSIS 712
           +  R YSRI PP P   + +IRVSNNIA+L  PKEGPK RQLLSLPPFPGHP PGKN + 
Sbjct: 11  LATRYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGHPLPGKNQVG 70

Query: 711 APGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADDSFTQKVELMKPMRKIR 532
             G+   VTA+ W+KYYF   + S I+S FR+GLVQ+E       F +   L KPMRKIR
Sbjct: 71  VSGESTHVTAIRWVKYYFDEIQDSQIQSLFRKGLVQVE-CPQLGGFDENGNL-KPMRKIR 128

Query: 531 PNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYLQRLAIYKDSAIIVLNK 352
             E+M+ GAR+H+PVS+AE ++SRRFD IPSGTLYPNADEIKYLQRL  YKDSAIIVLNK
Sbjct: 129 SGEIMEIGARIHLPVSVAEMKVSRRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNK 188

Query: 351 PPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIILLGRTKDSVSHLQW 172
           PPKLPVKG LPVHNSMD      LSYDYD GPKLVHRLDRESSGI+L+GRTK+SV HLQW
Sbjct: 189 PPKLPVKGTLPVHNSMDALAAAALSYDYDYGPKLVHRLDRESSGILLMGRTKESVDHLQW 248

Query: 171 LFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAPLSKVRLNDGKTER 1
           LFSNI N K + KAW +AC ATYQ+YWALVIG P+E+EG+I+APLSKV L+DGKTER
Sbjct: 249 LFSNIRNGKFTCKAWEEACNATYQKYWALVIGRPREREGLISAPLSKVLLDDGKTER 305


>ref|XP_008239134.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Prunus
           mume]
          Length = 471

 Score =  401 bits (1030), Expect = e-109
 Identities = 206/297 (69%), Positives = 236/297 (79%)
 Frame = -3

Query: 891 VGVRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPGHPFPGKNSIS 712
           V  R YSR+ PP   S   +IRVSN++ARL  PKEGPKPRQLLSLPPFPGHP PGK S  
Sbjct: 13  VARREYSRVCPPPAKSAGTLIRVSNHVARLGPPKEGPKPRQLLSLPPFPGHPLPGKRS-H 71

Query: 711 APGQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADDSFTQKVELMKPMRKIR 532
             G   RVTAV+W+KYYF     S I+SHF++GLVQME         +K   MKPMRKIR
Sbjct: 72  EDGVVSRVTAVSWVKYYFDGIYDSTIQSHFKQGLVQMEC----PGLIEKEGQMKPMRKIR 127

Query: 531 PNEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYLQRLAIYKDSAIIVLNK 352
           P+EVM+ GARV+VPVS+AE+R+SRRFD IPSGTLYPNADEI+YLQR   YKDSAIIVLNK
Sbjct: 128 PSEVMEVGARVYVPVSVAESRVSRRFDCIPSGTLYPNADEIEYLQRRVKYKDSAIIVLNK 187

Query: 351 PPKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIILLGRTKDSVSHLQW 172
           PPKLPVKGNLPVHNSMD      LSY  +EGPKLVHRLDRESSG+ L+GRTK+SVS LQW
Sbjct: 188 PPKLPVKGNLPVHNSMDALAAAALSYGNNEGPKLVHRLDRESSGLHLMGRTKESVSLLQW 247

Query: 171 LFSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAPLSKVRLNDGKTER 1
           L+++ N  KSS +AW+DACEA YQRYWALVIG+PKEKEG+I APLSKV L++GKTER
Sbjct: 248 LYTDFNKGKSSCQAWDDACEARYQRYWALVIGSPKEKEGLICAPLSKVLLDNGKTER 304


>ref|XP_010094671.1| RNA pseudourine synthase 3 [Morus notabilis]
           gi|587955350|gb|EXC41018.1| RNA pseudourine synthase 3
           [Morus notabilis]
          Length = 449

 Score =  400 bits (1029), Expect = e-109
 Identities = 201/295 (68%), Positives = 234/295 (79%)
 Frame = -3

Query: 885 VRRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPGHPFPGKNSISAP 706
           +R+YSRIRPP       VIRVSNN+A+L  PKEGPKPRQLLSLPPFPG P PGKNS    
Sbjct: 6   IRQYSRIRPPAAAEAGPVIRVSNNVAQLGGPKEGPKPRQLLSLPPFPGLPLPGKNS---- 61

Query: 705 GQHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLIADDSFTQKVELMKPMRKIRPN 526
              +RVTA++W+KYYF+    +VI+SHF + LVQME     D   ++   MKPMRKI+PN
Sbjct: 62  ---ERVTAISWVKYYFEEVHDNVIQSHFNKSLVQMECSNFGDPLAERDRKMKPMRKIKPN 118

Query: 525 EVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYLQRLAIYKDSAIIVLNKPP 346
           EVM  G R++VPVS+AE+RIS+RFD IPSGTL+PNADEI YLQRL    DSAI+VLNKPP
Sbjct: 119 EVMVEGTRIYVPVSVAESRISKRFDVIPSGTLHPNADEIAYLQRL----DSAILVLNKPP 174

Query: 345 KLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIILLGRTKDSVSHLQWLF 166
           +LPVKG+LPVHNSMD      LSYDY EGPKLVHRLDR+SSG++L+GRTK+S+SHL+WLF
Sbjct: 175 RLPVKGHLPVHNSMDALAAAALSYDYSEGPKLVHRLDRDSSGLLLMGRTKESISHLEWLF 234

Query: 165 SNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAPLSKVRLNDGKTER 1
           SNI       KAWNDACEA YQ+YWALVIG+PKEKEGII APLSKV LNDGKTER
Sbjct: 235 SNI-------KAWNDACEAKYQKYWALVIGSPKEKEGIICAPLSKVLLNDGKTER 282


>gb|KJB56432.1| hypothetical protein B456_009G119600 [Gossypium raimondii]
          Length = 350

 Score =  400 bits (1029), Expect = e-109
 Identities = 199/296 (67%), Positives = 236/296 (79%), Gaps = 2/296 (0%)
 Frame = -3

Query: 882 RRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPGHPFPGKNSISAPG 703
           R YSR+ PP P   + VIRVSNN+A L  PK+GPKPRQLLSLPPFPGH  PGKNS +   
Sbjct: 15  RHYSRVAPPPPAYADPVIRVSNNVAYLGSPKQGPKPRQLLSLPPFPGHHLPGKNSATG-- 72

Query: 702 QHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLI--ADDSFTQKVELMKPMRKIRP 529
              RVTA++W+KYYF     S I+SHF +GLV++E     A DSF ++   MK +RKI+ 
Sbjct: 73  ---RVTAISWLKYYFDEISDSAIQSHFNKGLVEIESSNPNAADSFIERDGQMKSLRKIKH 129

Query: 528 NEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYLQRLAIYKDSAIIVLNKP 349
           NEVM+ GARV VPVSIAETR+S+RFD IPSGTL+PNADEI YL+RL  YKD AI+VLNKP
Sbjct: 130 NEVMEVGARVWVPVSIAETRVSKRFDCIPSGTLHPNADEIDYLRRLVKYKDYAILVLNKP 189

Query: 348 PKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIILLGRTKDSVSHLQWL 169
           PKLPVKG+LPVHNSMD      LSY YDEGPKLVHRLDRESSG++L+GRTK+S++HL WL
Sbjct: 190 PKLPVKGSLPVHNSMDALAAAALSYYYDEGPKLVHRLDRESSGLLLMGRTKESINHLHWL 249

Query: 168 FSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAPLSKVRLNDGKTER 1
           F++IN  KSS KAWNDAC+A +QRYWALVIGTPKE EG+I +PLSK+ L+DGKTER
Sbjct: 250 FNDINPAKSSCKAWNDACDAKFQRYWALVIGTPKENEGLIRSPLSKILLDDGKTER 305


>gb|KJB56431.1| hypothetical protein B456_009G119600 [Gossypium raimondii]
          Length = 370

 Score =  400 bits (1029), Expect = e-109
 Identities = 199/296 (67%), Positives = 236/296 (79%), Gaps = 2/296 (0%)
 Frame = -3

Query: 882 RRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPGHPFPGKNSISAPG 703
           R YSR+ PP P   + VIRVSNN+A L  PK+GPKPRQLLSLPPFPGH  PGKNS +   
Sbjct: 15  RHYSRVAPPPPAYADPVIRVSNNVAYLGSPKQGPKPRQLLSLPPFPGHHLPGKNSATG-- 72

Query: 702 QHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLI--ADDSFTQKVELMKPMRKIRP 529
              RVTA++W+KYYF     S I+SHF +GLV++E     A DSF ++   MK +RKI+ 
Sbjct: 73  ---RVTAISWLKYYFDEISDSAIQSHFNKGLVEIESSNPNAADSFIERDGQMKSLRKIKH 129

Query: 528 NEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYLQRLAIYKDSAIIVLNKP 349
           NEVM+ GARV VPVSIAETR+S+RFD IPSGTL+PNADEI YL+RL  YKD AI+VLNKP
Sbjct: 130 NEVMEVGARVWVPVSIAETRVSKRFDCIPSGTLHPNADEIDYLRRLVKYKDYAILVLNKP 189

Query: 348 PKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIILLGRTKDSVSHLQWL 169
           PKLPVKG+LPVHNSMD      LSY YDEGPKLVHRLDRESSG++L+GRTK+S++HL WL
Sbjct: 190 PKLPVKGSLPVHNSMDALAAAALSYYYDEGPKLVHRLDRESSGLLLMGRTKESINHLHWL 249

Query: 168 FSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAPLSKVRLNDGKTER 1
           F++IN  KSS KAWNDAC+A +QRYWALVIGTPKE EG+I +PLSK+ L+DGKTER
Sbjct: 250 FNDINPAKSSCKAWNDACDAKFQRYWALVIGTPKENEGLIRSPLSKILLDDGKTER 305


>ref|XP_012444478.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Gossypium
           raimondii] gi|823223472|ref|XP_012444479.1| PREDICTED:
           RNA pseudouridine synthase 3, mitochondrial [Gossypium
           raimondii] gi|763789432|gb|KJB56428.1| hypothetical
           protein B456_009G119600 [Gossypium raimondii]
          Length = 472

 Score =  400 bits (1029), Expect = e-109
 Identities = 199/296 (67%), Positives = 236/296 (79%), Gaps = 2/296 (0%)
 Frame = -3

Query: 882 RRYSRIRPPRPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPGHPFPGKNSISAPG 703
           R YSR+ PP P   + VIRVSNN+A L  PK+GPKPRQLLSLPPFPGH  PGKNS +   
Sbjct: 15  RHYSRVAPPPPAYADPVIRVSNNVAYLGSPKQGPKPRQLLSLPPFPGHHLPGKNSATG-- 72

Query: 702 QHDRVTAVNWIKYYFKSTRGSVIESHFREGLVQMEDLI--ADDSFTQKVELMKPMRKIRP 529
              RVTA++W+KYYF     S I+SHF +GLV++E     A DSF ++   MK +RKI+ 
Sbjct: 73  ---RVTAISWLKYYFDEISDSAIQSHFNKGLVEIESSNPNAADSFIERDGQMKSLRKIKH 129

Query: 528 NEVMKHGARVHVPVSIAETRISRRFDPIPSGTLYPNADEIKYLQRLAIYKDSAIIVLNKP 349
           NEVM+ GARV VPVSIAETR+S+RFD IPSGTL+PNADEI YL+RL  YKD AI+VLNKP
Sbjct: 130 NEVMEVGARVWVPVSIAETRVSKRFDCIPSGTLHPNADEIDYLRRLVKYKDYAILVLNKP 189

Query: 348 PKLPVKGNLPVHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGIILLGRTKDSVSHLQWL 169
           PKLPVKG+LPVHNSMD      LSY YDEGPKLVHRLDRESSG++L+GRTK+S++HL WL
Sbjct: 190 PKLPVKGSLPVHNSMDALAAAALSYYYDEGPKLVHRLDRESSGLLLMGRTKESINHLHWL 249

Query: 168 FSNINNTKSSSKAWNDACEATYQRYWALVIGTPKEKEGIINAPLSKVRLNDGKTER 1
           F++IN  KSS KAWNDAC+A +QRYWALVIGTPKE EG+I +PLSK+ L+DGKTER
Sbjct: 250 FNDINPAKSSCKAWNDACDAKFQRYWALVIGTPKENEGLIRSPLSKILLDDGKTER 305