BLASTX nr result
ID: Wisteria21_contig00020121
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Wisteria21_contig00020121
(2066 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004497527.1| PREDICTED: RNA polymerase sigma factor sigF,... 849 0.0
ref|XP_007144359.1| hypothetical protein PHAVU_007G149600g [Phas... 830 0.0
ref|XP_003590454.2| RNA polymerase sigma factor [Medicago trunca... 820 0.0
ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor sigF,... 820 0.0
ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF,... 818 0.0
ref|XP_014514039.1| PREDICTED: RNA polymerase sigma factor sigF,... 805 0.0
gb|KOM35179.1| hypothetical protein LR48_Vigan02g132900 [Vigna a... 805 0.0
ref|XP_014514037.1| PREDICTED: RNA polymerase sigma factor sigF,... 803 0.0
ref|XP_012570330.1| PREDICTED: RNA polymerase sigma factor sigF,... 789 0.0
ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF,... 669 0.0
ref|XP_006577029.1| PREDICTED: RNA polymerase sigma factor sigF,... 668 0.0
ref|XP_004493985.1| PREDICTED: RNA polymerase sigma factor sigF,... 668 0.0
ref|XP_007162766.1| hypothetical protein PHAVU_001G178600g [Phas... 649 0.0
ref|XP_014496115.1| PREDICTED: RNA polymerase sigma factor sigF,... 640 e-180
gb|KOM29307.1| hypothetical protein LR48_Vigan641s009500 [Vigna ... 638 e-180
ref|XP_014496116.1| PREDICTED: RNA polymerase sigma factor sigF,... 626 e-176
ref|XP_003625673.1| RNA polymerase sigma factor [Medicago trunca... 603 e-169
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,... 600 e-168
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,... 599 e-168
ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF,... 594 e-167
>ref|XP_004497527.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Cicer arietinum]
Length = 576
Score = 849 bits (2193), Expect = 0.0
Identities = 439/577 (76%), Positives = 495/577 (85%), Gaps = 14/577 (2%)
Frame = -2
Query: 1876 MQSARNMFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVL 1697
M+SAR+MF SSP FPPRTHHWNTLPS SYTSVLMLREQ APT+ +WSTSFSAQNFPTSVL
Sbjct: 1 MESARSMFSSSPSFPPRTHHWNTLPSSSYTSVLMLREQVAPTITAWSTSFSAQNFPTSVL 60
Query: 1696 LQEQRDEYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXX 1517
LQEQRDEYRPLLHISK DKTCQA LNT QMDMVSVHEEN+T + DQV HDFRQ
Sbjct: 61 LQEQRDEYRPLLHISKGDKTCQATLNTTQMDMVSVHEENNTSNVDQVSHDFRQHLHLLPH 120
Query: 1516 XXXXXNSTQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSK-QAASVAEDLK 1340
S+QTG I+ASS LQ V VDS+RP D LQCNAVSL RKA +PSK QAASVAEDLK
Sbjct: 121 LENLLTSSQTGEINASSNLQRV-VDSDRPADSLQCNAVSLPRKAFTPSKKQAASVAEDLK 179
Query: 1339 SIKADEDADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLA 1199
S+K DEDA++S+PFG NKTVRSTRLRERR+K+RKV KSK KD ET+LA
Sbjct: 180 SVKVDEDANNSVPFGLASPGLAEPSLGSNKTVRSTRLRERRAKERKVSKSKVKDKETHLA 239
Query: 1198 RKDDAPKRLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELK 1019
KD ++L ++KK +K L+QNDPL+SFL SPD+K+LLTLEQES+LIAQIQ+LLRLEELK
Sbjct: 240 GKDATQEKLQIQKKTSKGLNQNDPLNSFLQSPDSKQLLTLEQESKLIAQIQDLLRLEELK 299
Query: 1018 TSLQSQSGREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRG 839
TSLQSQ GREPTM EWAEGAGL+ R L+AQLR GNRSREKLIQANLRMVH++AK YQGRG
Sbjct: 300 TSLQSQFGREPTMVEWAEGAGLNWRKLKAQLRSGNRSREKLIQANLRMVHYVAKNYQGRG 359
Query: 838 LSLEDLLQEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYT 659
LSLEDLLQEGS GLLKSVKKFKPQAG RFG+YAY WI+Q IRKAIF+HSRTIRLPE+VY
Sbjct: 360 LSLEDLLQEGSTGLLKSVKKFKPQAGSRFGNYAYWWIKQAIRKAIFNHSRTIRLPEKVYA 419
Query: 658 QLGKILEAKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTT 479
+L K+LEAKKLY++EGNL+PTKEEL++RVGI+ DK+D+LLF +R+PISMQ+TV A+ DTT
Sbjct: 420 KLSKVLEAKKLYMEEGNLNPTKEELAKRVGISADKVDSLLFVSRIPISMQKTVWAEHDTT 479
Query: 478 FQEIIADTAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGE 299
FQEI ADTAIESTDMSVAKQLMRRHVLN L LRPKERRIIRLRFGFEDGE++SLS++ E
Sbjct: 480 FQEITADTAIESTDMSVAKQLMRRHVLNTLKTLRPKERRIIRLRFGFEDGEERSLSEIAE 539
Query: 298 IFGLSRERVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
IFGLSRERVRQLE+RA YKLKK LV QGLDAYADLL+
Sbjct: 540 IFGLSRERVRQLESRALYKLKKSLVCQGLDAYADLLI 576
>ref|XP_007144359.1| hypothetical protein PHAVU_007G149600g [Phaseolus vulgaris]
gi|561017549|gb|ESW16353.1| hypothetical protein
PHAVU_007G149600g [Phaseolus vulgaris]
Length = 582
Score = 830 bits (2143), Expect = 0.0
Identities = 431/576 (74%), Positives = 487/576 (84%), Gaps = 13/576 (2%)
Frame = -2
Query: 1876 MQSARNMFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVL 1697
M+ AR MFCSSPPFPPRTH WNT P+ S TSVLMLREQA+ TVASWS++FSAQNFP SVL
Sbjct: 10 MEFARTMFCSSPPFPPRTHPWNTHPTSSSTSVLMLREQASSTVASWSSNFSAQNFPASVL 69
Query: 1696 LQEQRDEYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXX 1517
LQEQRDEYRPLLH+SKEDKT QAILNTRQMDM +VHEEN+TG+ADQ+V DFR+
Sbjct: 70 LQEQRDEYRPLLHMSKEDKTSQAILNTRQMDMDTVHEENNTGNADQIVLDFRKHLHLWPR 129
Query: 1516 XXXXXNSTQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLKS 1337
NS+QTG I ASSTLQHV+VDSER D +QCN VSLA+KALS +KQ +SV E LKS
Sbjct: 130 LQNLLNSSQTGEIAASSTLQHVSVDSERRTDGVQCNGVSLAKKALSTAKQTSSVVEGLKS 189
Query: 1336 IKADEDADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLAR 1196
IKAD DDSIPFG NKTVRSTRL ERR+KQRKV KS KD ETYL R
Sbjct: 190 IKAD---DDSIPFGLASTGLADPSVGRNKTVRSTRLLERRAKQRKVSKSIVKDDETYLTR 246
Query: 1195 KDDAPKRLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKT 1016
KDDA +R+ EKKIN+E DQND L FL P+TK+LLTLEQES+LI++IQ+LL+LEELKT
Sbjct: 247 KDDAQERIRKEKKINEEFDQNDTLRMFLRGPETKQLLTLEQESELISKIQDLLKLEELKT 306
Query: 1015 SLQSQSGREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGL 836
LQSQ GREPTMAEWAEGAGL+CR L +QLR GNRSREKLIQANLRMV H+AK+YQGRGL
Sbjct: 307 RLQSQFGREPTMAEWAEGAGLNCRMLHSQLRHGNRSREKLIQANLRMVVHVAKSYQGRGL 366
Query: 835 SLEDLLQEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQ 656
SL+DLLQEGSMGL+KSV+KF P AG RFG+YA+ WIRQ IRKA+F HSRTIRLPE+VY Q
Sbjct: 367 SLQDLLQEGSMGLMKSVEKFNPLAGSRFGNYAFWWIRQAIRKAVFRHSRTIRLPEKVYIQ 426
Query: 655 LGKILEAKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTF 476
LGKI+EAKKLYIQEGNLHPTKEEL+RRVGI V+KID LL+AAR+PISMQQTV ADQDTTF
Sbjct: 427 LGKIMEAKKLYIQEGNLHPTKEELARRVGITVEKIDKLLYAARIPISMQQTVWADQDTTF 486
Query: 475 QEIIADTAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEI 296
QEI AD +E+TD+SV KQLMRRHVLN+L ILRPKER+IIRLR+GFEDGEQ+SLS++G+I
Sbjct: 487 QEITADPTVEATDLSVEKQLMRRHVLNVLTILRPKERKIIRLRYGFEDGEQRSLSEIGDI 546
Query: 295 FGLSRERVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
FGLS+ERVRQLE RA YKLKKCLV QGLDAY DLL+
Sbjct: 547 FGLSKERVRQLEIRALYKLKKCLVKQGLDAYVDLLL 582
>ref|XP_003590454.2| RNA polymerase sigma factor [Medicago truncatula]
gi|657403360|gb|AES60705.2| RNA polymerase sigma factor
[Medicago truncatula]
Length = 561
Score = 820 bits (2118), Expect = 0.0
Identities = 425/576 (73%), Positives = 480/576 (83%), Gaps = 13/576 (2%)
Frame = -2
Query: 1876 MQSARNMFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVL 1697
M+SAR MFCSSP PPRTHHWNTLPS SYTSVLMLREQ APTV +W TS+S+QNFPTSVL
Sbjct: 1 MESARTMFCSSPLCPPRTHHWNTLPSSSYTSVLMLREQVAPTVTAWCTSYSSQNFPTSVL 60
Query: 1696 LQEQRDEYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXX 1517
LQEQ DEYRPLLHISK+DKTCQA LNTRQMDMVSV E+NDT + DQV DFRQ
Sbjct: 61 LQEQCDEYRPLLHISKKDKTCQATLNTRQMDMVSVQEKNDTSNTDQVARDFRQHLHLLPR 120
Query: 1516 XXXXXNSTQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLKS 1337
S+QTG +D SSTLQH D LQCNAVSL SKQAASVAEDL S
Sbjct: 121 LENLLTSSQTGEMDGSSTLQHA--------DSLQCNAVSL-------SKQAASVAEDLIS 165
Query: 1336 IKADEDADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLAR 1196
IKADEDAD+SIPFG NKTVRSTRLRERR+K+RKVPK K KD ETYL
Sbjct: 166 IKADEDADNSIPFGLASSSSAEPLLGGNKTVRSTRLRERRAKERKVPKLKVKDKETYLDG 225
Query: 1195 KDDAPKRLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKT 1016
KD A ++L V+KKI+K ++Q+DPL+ FL SP++K+LLT EQESQL+ QIQELLRLE+LKT
Sbjct: 226 KDAAEEKLQVQKKISKGMNQSDPLNKFLQSPESKQLLTSEQESQLVVQIQELLRLEDLKT 285
Query: 1015 SLQSQSGREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGL 836
SLQSQ GREPTMAEWAEGAGL+CR ++AQLRCGNRSREKLIQANLR+VH+IAK+YQGRGL
Sbjct: 286 SLQSQFGREPTMAEWAEGAGLNCRKMKAQLRCGNRSREKLIQANLRLVHYIAKSYQGRGL 345
Query: 835 SLEDLLQEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQ 656
S+EDLLQEGS GL+KS+KKFK QAGCRF SYAY WI+Q IRKAI++HSRTIRLPE+VY +
Sbjct: 346 SIEDLLQEGSTGLIKSIKKFKTQAGCRFASYAYWWIKQAIRKAIYNHSRTIRLPEKVYNK 405
Query: 655 LGKILEAKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTF 476
L K+LEAKKLY +EGNL+PTKEEL+RRVGI+ DK+D LLF AR+PISMQ TV ++ DTTF
Sbjct: 406 LSKVLEAKKLYKEEGNLNPTKEELARRVGISPDKVDRLLFVARIPISMQNTVGSETDTTF 465
Query: 475 QEIIADTAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEI 296
QEI AD AIES +MSVAKQLMRRHVLN+L ILRPKERRIIRLRFGFEDGE+KSLS++GEI
Sbjct: 466 QEITADCAIESPNMSVAKQLMRRHVLNVLNILRPKERRIIRLRFGFEDGEEKSLSEIGEI 525
Query: 295 FGLSRERVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
FGLSRERVRQLE+RA YKLKK LV QGLDAYADLL+
Sbjct: 526 FGLSRERVRQLESRALYKLKKYLVGQGLDAYADLLI 561
>ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Glycine
max] gi|734436652|gb|KHN48258.1| RNA polymerase sigma
factor rpoD [Glycine soja] gi|947071029|gb|KRH19920.1|
hypothetical protein GLYMA_13G144000 [Glycine max]
Length = 574
Score = 820 bits (2117), Expect = 0.0
Identities = 427/577 (74%), Positives = 484/577 (83%), Gaps = 14/577 (2%)
Frame = -2
Query: 1876 MQSARNMFCSSPPFPPRTHH-WNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSV 1700
M+ +R MFCSSPPFPPRTHH WNTLP S TSVLMLREQA+PTVASWS++FSAQNFP SV
Sbjct: 1 MEFSRTMFCSSPPFPPRTHHPWNTLPLSSSTSVLMLREQASPTVASWSSNFSAQNFPASV 60
Query: 1699 LLQEQRDEYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXX 1520
LLQEQRDEYRPLLH+SKEDKT QA+L+TRQMD V VHEEN+T +ADQVV DFR+
Sbjct: 61 LLQEQRDEYRPLLHMSKEDKTSQAMLSTRQMDTVMVHEENNTENADQVVLDFRKHLHYWP 120
Query: 1519 XXXXXXNSTQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLK 1340
S+QTG I ASSTLQ V+ D +R + +QCN VSLA+KALS SKQ +SV EDLK
Sbjct: 121 HLQNLLASSQTGEISASSTLQQVSSDLDRHTNGVQCNRVSLAKKALSTSKQGSSVVEDLK 180
Query: 1339 SIKADEDADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLA 1199
SIKAD DDSIPFG NKTVRSTRL ERRSKQRKVPKSK D ETYLA
Sbjct: 181 SIKAD---DDSIPFGLASTGLADPSIGRNKTVRSTRLLERRSKQRKVPKSKVIDDETYLA 237
Query: 1198 RKDDAPKRLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELK 1019
RKDDA ++L VEKK N+ELDQNDPL FL P+TK+LLTLEQESQLI+QIQ+LLRLEE+K
Sbjct: 238 RKDDAHEKLRVEKKKNEELDQNDPLCFFLRGPETKQLLTLEQESQLISQIQDLLRLEEVK 297
Query: 1018 TSLQSQSGREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRG 839
T LQSQ GREPTMAEWAEG GL+CR L AQLR G+RSREKLIQANLRMV H+AK+YQGRG
Sbjct: 298 TKLQSQFGREPTMAEWAEGVGLNCRMLHAQLRSGSRSREKLIQANLRMVVHVAKSYQGRG 357
Query: 838 LSLEDLLQEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYT 659
LSL+DLLQEGSMGL+KSV+KF P G RFG+YA+ WIRQ IRKA+F HSRTIRLPE+V+
Sbjct: 358 LSLQDLLQEGSMGLMKSVEKFNPLVGSRFGNYAFWWIRQAIRKAVFRHSRTIRLPEKVFI 417
Query: 658 QLGKILEAKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTT 479
LGK++EAKKLYIQEGNLHPTKEEL+RRVG+ V+KID LLF+AR+PISMQQTV ADQ+TT
Sbjct: 418 LLGKVMEAKKLYIQEGNLHPTKEELARRVGVTVEKIDKLLFSARIPISMQQTVWADQNTT 477
Query: 478 FQEIIADTAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGE 299
FQEI AD +E+TD+SV KQLMR+HVLN+L IL PKERRIIRLR+GFEDGEQKSLS++G+
Sbjct: 478 FQEITADPTVEATDVSVEKQLMRQHVLNVLSILHPKERRIIRLRYGFEDGEQKSLSEIGD 537
Query: 298 IFGLSRERVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
IFGLS+ERVRQLE RA YKLKKCLV QGLDAY DLL+
Sbjct: 538 IFGLSKERVRQLEIRALYKLKKCLVKQGLDAYVDLLL 574
>ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Glycine max] gi|734417712|gb|KHN39038.1| RNA polymerase
sigma factor rpoD [Glycine soja]
gi|947083811|gb|KRH32532.1| hypothetical protein
GLYMA_10G057300 [Glycine max]
Length = 575
Score = 818 bits (2112), Expect = 0.0
Identities = 425/578 (73%), Positives = 487/578 (84%), Gaps = 15/578 (2%)
Frame = -2
Query: 1876 MQSARNMFCSSPPFPPRTHH-WNTLPSPSYTS-VLMLREQAAPTVASWSTSFSAQNFPTS 1703
M+ AR MFCSSPPFPPRTHH W+TLPS S TS VLML EQA+PTVASWS++FSAQNFP S
Sbjct: 1 MEFARTMFCSSPPFPPRTHHPWSTLPSSSSTSSVLMLHEQASPTVASWSSNFSAQNFPAS 60
Query: 1702 VLLQEQRDEYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXX 1523
VLL EQRDEYRPLLH+SKEDKT QA+L+TRQMD V+VHEEN+T +ADQVV DFR+
Sbjct: 61 VLLPEQRDEYRPLLHMSKEDKTSQAMLSTRQMDTVTVHEENNTENADQVVLDFRKHLHHW 120
Query: 1522 XXXXXXXNSTQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDL 1343
S+Q G + ASSTL+HV+VD ER + +Q N VSLA+KALS SKQ +SV EDL
Sbjct: 121 PNLQYLLTSSQIGEVAASSTLEHVSVDLERRPNGVQFNGVSLAKKALSTSKQESSVVEDL 180
Query: 1342 KSIKADEDADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYL 1202
KSIKAD DDSIPFG NKTVRSTRL ERRSKQRKVPKSK D ETYL
Sbjct: 181 KSIKAD---DDSIPFGLASTSLADPSIGRNKTVRSTRLLERRSKQRKVPKSKVIDDETYL 237
Query: 1201 ARKDDAPKRLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEEL 1022
ARKDDA ++L EKK N+ELDQ+DPL FLW P+TK+LLTLEQESQLI+QIQ+LLRLEE+
Sbjct: 238 ARKDDAQEKLRAEKKKNEELDQDDPLRLFLWGPETKQLLTLEQESQLISQIQDLLRLEEV 297
Query: 1021 KTSLQSQSGREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGR 842
KT+LQSQ GREPTMAEWAEGAGL+CR LQ+QL GNRSREKLIQANLRMV H+AK+YQGR
Sbjct: 298 KTNLQSQFGREPTMAEWAEGAGLNCRLLQSQLHSGNRSREKLIQANLRMVVHVAKSYQGR 357
Query: 841 GLSLEDLLQEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVY 662
GLSL+DLLQEGSMGL+KSV+KF P AG RFG+YA+ WIRQ IRKA+F HSRTIRLPE+V+
Sbjct: 358 GLSLQDLLQEGSMGLMKSVEKFNPLAGSRFGNYAFWWIRQAIRKAVFRHSRTIRLPEKVF 417
Query: 661 TQLGKILEAKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDT 482
LGK++EAKKLYIQEGNLHPTKEEL+RRVG+ V+KID LLF+AR+PISMQQTV ADQ+T
Sbjct: 418 ILLGKVMEAKKLYIQEGNLHPTKEELARRVGVTVEKIDKLLFSARIPISMQQTVWADQNT 477
Query: 481 TFQEIIADTAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVG 302
TFQEI AD +E+TD++V KQLMRRHVLN+L +L PKERRIIRLR+GFEDGEQKSLS++G
Sbjct: 478 TFQEITADPTVEATDVTVEKQLMRRHVLNVLSVLHPKERRIIRLRYGFEDGEQKSLSEIG 537
Query: 301 EIFGLSRERVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
+IFGLS+ERVRQLE RA YKLKKCLV QGLDAY DLL+
Sbjct: 538 DIFGLSKERVRQLEIRALYKLKKCLVKQGLDAYVDLLL 575
>ref|XP_014514039.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Vigna radiata var. radiata]
Length = 577
Score = 805 bits (2079), Expect = 0.0
Identities = 418/571 (73%), Positives = 475/571 (83%), Gaps = 8/571 (1%)
Frame = -2
Query: 1876 MQSARNMFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVL 1697
M+ AR MFCSSPPFPPR+H WNT S S TSVLMLREQA+ VASWS++FSAQNFP SVL
Sbjct: 10 MEFARTMFCSSPPFPPRSHPWNTHSSSSSTSVLMLREQASTAVASWSSNFSAQNFPASVL 69
Query: 1696 LQEQRDEYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXX 1517
LQEQRDEYRPLLH+SKEDKT QAILNTRQMD+ +VHEEN+TG+ADQVV DFR+
Sbjct: 70 LQEQRDEYRPLLHMSKEDKTSQAILNTRQMDVDTVHEENNTGNADQVVLDFRKHLHLWPR 129
Query: 1516 XXXXXNSTQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLKS 1337
S+QTG I ASSTLQH++VDSER D +QCN VSLA+KALS +KQA+ V E LKS
Sbjct: 130 LQNLLTSSQTGEIAASSTLQHISVDSERQTDSVQCNGVSLAKKALSTAKQASLVVEGLKS 189
Query: 1336 IKADEDADDSIPFG--------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLARKDDAP 1181
KAD DDSIPFG NKTVRS RL ERR+KQRKVPKS KD E Y RKD +
Sbjct: 190 TKAD---DDSIPFGLADPSIGRNKTVRSKRLLERRAKQRKVPKSVVKDDEAYDTRKDGSQ 246
Query: 1180 KRLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKTSLQSQ 1001
+RL EK IN+E D ND L FL P+TK+LLTLEQES+LI+QIQ+LL+LEELKT LQSQ
Sbjct: 247 ERLRKEKNINEEFDHNDTLRMFLRGPETKQLLTLEQESELISQIQDLLKLEELKTRLQSQ 306
Query: 1000 SGREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGLSLEDL 821
GREPTMAEWAEGAGL+ R L AQL GN+SREKLIQANLRMV H+AK+YQGRGLSL+DL
Sbjct: 307 FGREPTMAEWAEGAGLNSRKLHAQLHHGNKSREKLIQANLRMVVHVAKSYQGRGLSLQDL 366
Query: 820 LQEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQLGKIL 641
LQEGSMGL+KSV+KF P AG RFG+YA+ WIRQ IRKA+F HSRTIRLPE+VY QLGK++
Sbjct: 367 LQEGSMGLMKSVEKFNPLAGSRFGNYAFWWIRQAIRKAVFRHSRTIRLPEKVYIQLGKVM 426
Query: 640 EAKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTFQEIIA 461
EAKKLYIQEGNLHPTKEEL+RRVGI V+KID LL++AR PISMQ+TV ADQDTTFQEI A
Sbjct: 427 EAKKLYIQEGNLHPTKEELARRVGITVEKIDKLLYSARTPISMQKTVWADQDTTFQEITA 486
Query: 460 DTAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEIFGLSR 281
D +E+TD+SV KQLMRRHVLN+L ILRPKER+IIRLR+GFEDGEQKSLS++G+IFGLS+
Sbjct: 487 DPTVEATDLSVEKQLMRRHVLNVLTILRPKERKIIRLRYGFEDGEQKSLSEIGDIFGLSK 546
Query: 280 ERVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
ERVRQLE RA YKLKKCLV QGLDAY DLL+
Sbjct: 547 ERVRQLEIRALYKLKKCLVKQGLDAYVDLLL 577
>gb|KOM35179.1| hypothetical protein LR48_Vigan02g132900 [Vigna angularis]
Length = 654
Score = 805 bits (2078), Expect = 0.0
Identities = 419/576 (72%), Positives = 475/576 (82%), Gaps = 13/576 (2%)
Frame = -2
Query: 1876 MQSARNMFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVL 1697
M+ AR MFCSSPPFP RTH WNT S TSVLMLREQA+ VASWS++FSAQNFP SVL
Sbjct: 82 MEFARTMFCSSPPFPSRTHPWNTHSPSSSTSVLMLREQASSAVASWSSNFSAQNFPASVL 141
Query: 1696 LQEQRDEYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXX 1517
LQEQRDEYRPLLH+SKEDKT QAILNTRQMDM +VHEEN+TG+ADQVV DFR+
Sbjct: 142 LQEQRDEYRPLLHMSKEDKTSQAILNTRQMDMDAVHEENNTGNADQVVLDFRKHLHLWPR 201
Query: 1516 XXXXXNSTQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLKS 1337
S+QTG I ASSTLQH++VDS+R D +QCN VSLA+KALS +KQA+ V E LKS
Sbjct: 202 LQNLLTSSQTGEIAASSTLQHISVDSDRRTDSVQCNGVSLAKKALSTAKQASLVVEGLKS 261
Query: 1336 IKADEDADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLAR 1196
KAD DDSIPFG NKTVRSTRL ERR+KQRKVPKS KD E Y R
Sbjct: 262 TKAD---DDSIPFGLASTSLADPSIGRNKTVRSTRLLERRAKQRKVPKSVVKDDEAYDTR 318
Query: 1195 KDDAPKRLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKT 1016
KDD+ +RL EK IN+E D ND L FL P+TK+LLTLEQES+LI+QIQ+LL+LEELKT
Sbjct: 319 KDDSQERLRKEKNINEEFDHNDTLRMFLRGPETKQLLTLEQESELISQIQDLLKLEELKT 378
Query: 1015 SLQSQSGREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGL 836
LQSQ GREPTMAEWAEGAGL+ R L AQL GN+SREKLIQANLRMV H+AK+YQGRGL
Sbjct: 379 RLQSQFGREPTMAEWAEGAGLNSRKLHAQLHHGNKSREKLIQANLRMVVHVAKSYQGRGL 438
Query: 835 SLEDLLQEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQ 656
SL+DLLQEGSMGL+KSV+KF P AG RFG+YA+ WIRQ IRKA+F HSRTIRLPE+VY Q
Sbjct: 439 SLQDLLQEGSMGLMKSVEKFNPLAGSRFGNYAFWWIRQAIRKAVFRHSRTIRLPEKVYIQ 498
Query: 655 LGKILEAKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTF 476
LGK++EAKKLYIQEGNLHPTKEEL+RRVGI V+KID LL++AR PISMQ+TV ADQDTTF
Sbjct: 499 LGKVMEAKKLYIQEGNLHPTKEELARRVGITVEKIDKLLYSARTPISMQKTVWADQDTTF 558
Query: 475 QEIIADTAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEI 296
QEI AD +E+TD+SV KQLMRRHVLN+L ILRPKER+IIRLR+GFEDGEQKSLS++G+I
Sbjct: 559 QEITADPTVEATDLSVEKQLMRRHVLNVLTILRPKERKIIRLRYGFEDGEQKSLSEIGDI 618
Query: 295 FGLSRERVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
FGLS+ERVRQLE RA YKLKKCLV QGLDAY DLL+
Sbjct: 619 FGLSKERVRQLEIRALYKLKKCLVKQGLDAYVDLLL 654
>ref|XP_014514037.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Vigna radiata var. radiata]
Length = 582
Score = 803 bits (2074), Expect = 0.0
Identities = 418/576 (72%), Positives = 475/576 (82%), Gaps = 13/576 (2%)
Frame = -2
Query: 1876 MQSARNMFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVL 1697
M+ AR MFCSSPPFPPR+H WNT S S TSVLMLREQA+ VASWS++FSAQNFP SVL
Sbjct: 10 MEFARTMFCSSPPFPPRSHPWNTHSSSSSTSVLMLREQASTAVASWSSNFSAQNFPASVL 69
Query: 1696 LQEQRDEYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXX 1517
LQEQRDEYRPLLH+SKEDKT QAILNTRQMD+ +VHEEN+TG+ADQVV DFR+
Sbjct: 70 LQEQRDEYRPLLHMSKEDKTSQAILNTRQMDVDTVHEENNTGNADQVVLDFRKHLHLWPR 129
Query: 1516 XXXXXNSTQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLKS 1337
S+QTG I ASSTLQH++VDSER D +QCN VSLA+KALS +KQA+ V E LKS
Sbjct: 130 LQNLLTSSQTGEIAASSTLQHISVDSERQTDSVQCNGVSLAKKALSTAKQASLVVEGLKS 189
Query: 1336 IKADEDADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLAR 1196
KAD DDSIPFG NKTVRS RL ERR+KQRKVPKS KD E Y R
Sbjct: 190 TKAD---DDSIPFGLASTSLADPSIGRNKTVRSKRLLERRAKQRKVPKSVVKDDEAYDTR 246
Query: 1195 KDDAPKRLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKT 1016
KD + +RL EK IN+E D ND L FL P+TK+LLTLEQES+LI+QIQ+LL+LEELKT
Sbjct: 247 KDGSQERLRKEKNINEEFDHNDTLRMFLRGPETKQLLTLEQESELISQIQDLLKLEELKT 306
Query: 1015 SLQSQSGREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGL 836
LQSQ GREPTMAEWAEGAGL+ R L AQL GN+SREKLIQANLRMV H+AK+YQGRGL
Sbjct: 307 RLQSQFGREPTMAEWAEGAGLNSRKLHAQLHHGNKSREKLIQANLRMVVHVAKSYQGRGL 366
Query: 835 SLEDLLQEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQ 656
SL+DLLQEGSMGL+KSV+KF P AG RFG+YA+ WIRQ IRKA+F HSRTIRLPE+VY Q
Sbjct: 367 SLQDLLQEGSMGLMKSVEKFNPLAGSRFGNYAFWWIRQAIRKAVFRHSRTIRLPEKVYIQ 426
Query: 655 LGKILEAKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTF 476
LGK++EAKKLYIQEGNLHPTKEEL+RRVGI V+KID LL++AR PISMQ+TV ADQDTTF
Sbjct: 427 LGKVMEAKKLYIQEGNLHPTKEELARRVGITVEKIDKLLYSARTPISMQKTVWADQDTTF 486
Query: 475 QEIIADTAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEI 296
QEI AD +E+TD+SV KQLMRRHVLN+L ILRPKER+IIRLR+GFEDGEQKSLS++G+I
Sbjct: 487 QEITADPTVEATDLSVEKQLMRRHVLNVLTILRPKERKIIRLRYGFEDGEQKSLSEIGDI 546
Query: 295 FGLSRERVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
FGLS+ERVRQLE RA YKLKKCLV QGLDAY DLL+
Sbjct: 547 FGLSKERVRQLEIRALYKLKKCLVKQGLDAYVDLLL 582
>ref|XP_012570330.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Cicer arietinum]
Length = 543
Score = 789 bits (2038), Expect = 0.0
Identities = 411/544 (75%), Positives = 465/544 (85%), Gaps = 14/544 (2%)
Frame = -2
Query: 1777 MLREQAAPTVASWSTSFSAQNFPTSVLLQEQRDEYRPLLHISKEDKTCQAILNTRQMDMV 1598
MLREQ APT+ +WSTSFSAQNFPTSVLLQEQRDEYRPLLHISK DKTCQA LNT QMDMV
Sbjct: 1 MLREQVAPTITAWSTSFSAQNFPTSVLLQEQRDEYRPLLHISKGDKTCQATLNTTQMDMV 60
Query: 1597 SVHEENDTGSADQVVHDFRQXXXXXXXXXXXXNSTQTGGIDASSTLQHVTVDSERPVDIL 1418
SVHEEN+T + DQV HDFRQ S+QTG I+ASS LQ V VDS+RP D L
Sbjct: 61 SVHEENNTSNVDQVSHDFRQHLHLLPHLENLLTSSQTGEINASSNLQRV-VDSDRPADSL 119
Query: 1417 QCNAVSLARKALSPSK-QAASVAEDLKSIKADEDADDSIPFG-------------NKTVR 1280
QCNAVSL RKA +PSK QAASVAEDLKS+K DEDA++S+PFG NKTVR
Sbjct: 120 QCNAVSLPRKAFTPSKKQAASVAEDLKSVKVDEDANNSVPFGLASPGLAEPSLGSNKTVR 179
Query: 1279 STRLRERRSKQRKVPKSKAKDYETYLARKDDAPKRLHVEKKINKELDQNDPLHSFLWSPD 1100
STRLRERR+K+RKV KSK KD ET+LA KD ++L ++KK +K L+QNDPL+SFL SPD
Sbjct: 180 STRLRERRAKERKVSKSKVKDKETHLAGKDATQEKLQIQKKTSKGLNQNDPLNSFLQSPD 239
Query: 1099 TKKLLTLEQESQLIAQIQELLRLEELKTSLQSQSGREPTMAEWAEGAGLSCRALQAQLRC 920
+K+LLTLEQES+LIAQIQ+LLRLEELKTSLQSQ GREPTM EWAEGAGL+ R L+AQLR
Sbjct: 240 SKQLLTLEQESKLIAQIQDLLRLEELKTSLQSQFGREPTMVEWAEGAGLNWRKLKAQLRS 299
Query: 919 GNRSREKLIQANLRMVHHIAKTYQGRGLSLEDLLQEGSMGLLKSVKKFKPQAGCRFGSYA 740
GNRSREKLIQANLRMVH++AK YQGRGLSLEDLLQEGS GLLKSVKKFKPQAG RFG+YA
Sbjct: 300 GNRSREKLIQANLRMVHYVAKNYQGRGLSLEDLLQEGSTGLLKSVKKFKPQAGSRFGNYA 359
Query: 739 YLWIRQTIRKAIFHHSRTIRLPERVYTQLGKILEAKKLYIQEGNLHPTKEELSRRVGIAV 560
Y WI+Q IRKAIF+HSRTIRLPE+VY +L K+LEAKKLY++EGNL+PTKEEL++RVGI+
Sbjct: 360 YWWIKQAIRKAIFNHSRTIRLPEKVYAKLSKVLEAKKLYMEEGNLNPTKEELAKRVGISA 419
Query: 559 DKIDNLLFAARVPISMQQTVSADQDTTFQEIIADTAIESTDMSVAKQLMRRHVLNLLGIL 380
DK+D+LLF +R+PISMQ+TV A+ DTTFQEI ADTAIESTDMSVAKQLMRRHVLN L L
Sbjct: 420 DKVDSLLFVSRIPISMQKTVWAEHDTTFQEITADTAIESTDMSVAKQLMRRHVLNTLKTL 479
Query: 379 RPKERRIIRLRFGFEDGEQKSLSQVGEIFGLSRERVRQLENRAFYKLKKCLVSQGLDAYA 200
RPKERRIIRLRFGFEDGE++SLS++ EIFGLSRERVRQLE+RA YKLKK LV QGLDAYA
Sbjct: 480 RPKERRIIRLRFGFEDGEERSLSEIAEIFGLSRERVRQLESRALYKLKKSLVCQGLDAYA 539
Query: 199 DLLV 188
DLL+
Sbjct: 540 DLLI 543
>ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Glycine max] gi|734316844|gb|KHN02326.1| RNA polymerase
sigma factor rpoD [Glycine soja]
gi|947046376|gb|KRG96005.1| hypothetical protein
GLYMA_19G183100 [Glycine max] gi|947046377|gb|KRG96006.1|
hypothetical protein GLYMA_19G183100 [Glycine max]
gi|947046378|gb|KRG96007.1| hypothetical protein
GLYMA_19G183100 [Glycine max]
Length = 554
Score = 669 bits (1725), Expect = 0.0
Identities = 357/570 (62%), Positives = 426/570 (74%), Gaps = 13/570 (2%)
Frame = -2
Query: 1858 MFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVLLQEQRD 1679
MF SSPPFP S S SV ML EQAAP VASWS+S +AQ+FPTSVLLQEQRD
Sbjct: 1 MFSSSPPFP----------SSSSPSVTMLHEQAAPAVASWSSSSAAQHFPTSVLLQEQRD 50
Query: 1678 EYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXXXXXXXN 1499
EY+P LH+ ++ T LNTRQMDM SVHE+ +T +ADQ+VHDF Q
Sbjct: 51 EYKPFLHVHNKETT----LNTRQMDMTSVHEKGNTSNADQLVHDFVQQLHLRSHLQNLLT 106
Query: 1498 STQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLKSIKADED 1319
+ T GI ASS LQ V +DSE P D + NAVSLA++ALS SKQA S ++K I+ D+D
Sbjct: 107 CSPTRGIAASSILQPVDIDSEWPADGVPRNAVSLAQQALSASKQAVSTTGEMKLIEIDDD 166
Query: 1318 ADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLARKDDAPK 1178
D +P G NK VRSTR+ ER SKQRK KSK D E+YL RK D +
Sbjct: 167 --DPLPSGLASTSLTDSSLKKNKVVRSTRIIERLSKQRKSSKSKFLDEESYLERKSDVQR 224
Query: 1177 RLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKTSLQSQS 998
RL +EKK+ + D NDPL FL P++++LLT E+ESQLI Q+Q+L RLEE+K LQ+Q
Sbjct: 225 RLRLEKKLKEGYDPNDPLRLFLSGPESRQLLTREEESQLITQLQDLSRLEEVKIRLQTQL 284
Query: 997 GREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGLSLEDLL 818
REPT+AEWA+ G SC ALQ QL C NRS+EKL ANLRMV HIAK YQGRGLSL+DL
Sbjct: 285 RREPTLAEWADAVGHSCYALQTQLHCANRSKEKLFHANLRMVVHIAKHYQGRGLSLQDLF 344
Query: 817 QEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQLGKILE 638
QEGS GL+KS++KFKP+AGCRFG+YAY WIR +RKAIF HSRTIRLPE +YT LGK++E
Sbjct: 345 QEGSTGLMKSIEKFKPEAGCRFGTYAYWWIRHAVRKAIFLHSRTIRLPENLYTLLGKVIE 404
Query: 637 AKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTFQEIIAD 458
AKK YIQEGNLHPTKEEL+R+VGI ++K+DNLLFA+R PISMQQTV ADQDTTFQEI AD
Sbjct: 405 AKKSYIQEGNLHPTKEELARKVGITIEKMDNLLFASRNPISMQQTVWADQDTTFQEITAD 464
Query: 457 TAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEIFGLSRE 278
+AIE D++V+KQLMR HV NLL IL PKER IIRLRFG EDGE+K+LS +G++FGL++E
Sbjct: 465 SAIEIPDVTVSKQLMRMHVHNLLNILSPKERGIIRLRFGIEDGEEKTLSDIGKVFGLTKE 524
Query: 277 RVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
RVRQLE+RA KL++CL SQGLDAY DLLV
Sbjct: 525 RVRQLESRALLKLRQCLESQGLDAYTDLLV 554
>ref|XP_006577029.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Glycine max] gi|734340710|gb|KHN09515.1| RNA
polymerase sigma factor rpoD [Glycine soja]
gi|947119470|gb|KRH67719.1| hypothetical protein
GLYMA_03G182600 [Glycine max]
Length = 554
Score = 668 bits (1724), Expect = 0.0
Identities = 358/570 (62%), Positives = 424/570 (74%), Gaps = 13/570 (2%)
Frame = -2
Query: 1858 MFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVLLQEQRD 1679
MF SSPPFP S S SV ML EQAAP VASWS+S +AQ+FPTSVLLQEQRD
Sbjct: 1 MFSSSPPFP----------SSSSPSVTMLHEQAAPAVASWSSSSAAQHFPTSVLLQEQRD 50
Query: 1678 EYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXXXXXXXN 1499
EY+PLLH+ ++ T LNTRQMDM SVHE+ + + DQ+VHDF Q
Sbjct: 51 EYKPLLHVHNKETT----LNTRQMDMTSVHEKGNMSNGDQLVHDFVQQLHLRSHLQNLLT 106
Query: 1498 STQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLKSIKADED 1319
+ T GI ASS LQ V +DSE P D L NA+SLA++ALS SKQA S ++K I+ D+D
Sbjct: 107 CSPTRGIAASSILQPVDIDSEWPADGLPGNAISLAQQALSASKQAVSTTGEMKLIEIDDD 166
Query: 1318 ADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLARKDDAPK 1178
D +PFG NK VRSTR+ ERRSKQRK KSK D E+YL RK D +
Sbjct: 167 --DPLPFGLASTSLANSSLKKNKVVRSTRIIERRSKQRKSSKSKIIDEESYLERKSDVQR 224
Query: 1177 RLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKTSLQSQS 998
RL +EKK+ + DQNDPL FL P++++LLT E+ES LI Q+Q+L R EE+K LQSQ
Sbjct: 225 RLRLEKKLKEGYDQNDPLRLFLSGPESRQLLTREEESLLITQLQDLSRFEEVKIRLQSQL 284
Query: 997 GREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGLSLEDLL 818
REPT+AEWA+ GLSC LQ QL C NRS+EKL ANLRMV HIAK YQGRGLSL+DL
Sbjct: 285 RREPTLAEWADAVGLSCYTLQTQLHCANRSKEKLFHANLRMVVHIAKHYQGRGLSLQDLF 344
Query: 817 QEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQLGKILE 638
QEGS GL+KS++KFKP+AGCRFG+YAY WIR IRKAIF HSRTIRLPE +YT LGK++E
Sbjct: 345 QEGSTGLMKSIQKFKPEAGCRFGTYAYWWIRHAIRKAIFLHSRTIRLPENLYTLLGKLIE 404
Query: 637 AKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTFQEIIAD 458
AKK YIQEGNLHPTKEEL+RRVGI V+K+DNLLFA+R PISMQQT+ DQDTTFQEI AD
Sbjct: 405 AKKSYIQEGNLHPTKEELARRVGITVEKLDNLLFASRNPISMQQTLWVDQDTTFQEITAD 464
Query: 457 TAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEIFGLSRE 278
+AIE ++V+KQLMRRHV NLL IL PKE+ IIRLRFG EDG++K+LS +G++FGL++E
Sbjct: 465 SAIEIPGVTVSKQLMRRHVHNLLNILSPKEKGIIRLRFGIEDGKEKTLSDIGKVFGLTKE 524
Query: 277 RVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
RVRQLE RA KLK+CL SQGLDAY DLLV
Sbjct: 525 RVRQLECRALSKLKQCLESQGLDAYIDLLV 554
>ref|XP_004493985.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Cicer arietinum]
Length = 555
Score = 668 bits (1723), Expect = 0.0
Identities = 350/570 (61%), Positives = 429/570 (75%), Gaps = 13/570 (2%)
Frame = -2
Query: 1858 MFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVLLQEQRD 1679
MF S PFP R H SPS V+M +QAAP V SWS+SF+AQ FPTSVLLQE RD
Sbjct: 1 MFSPSTPFPSRILH-----SPS---VMMPPDQAAPAVTSWSSSFAAQYFPTSVLLQEHRD 52
Query: 1678 EYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXXXXXXXN 1499
EY+PLLH+SKEDKT QA +NTR MD+ SV E+N+TG D+ VH+ +
Sbjct: 53 EYKPLLHVSKEDKTSQATMNTRVMDVASVREKNNTGDVDESVHNCMRQLHLRCHLQNLLA 112
Query: 1498 STQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLKSIKADED 1319
S+ T SS+ + +P D Q NA+SLA++ALS SKQAA+ AE+LK I+ D++
Sbjct: 113 SSATEDFGTSSS-------TTQPADGFQWNALSLAKQALSASKQAAAAAEELKLIEVDDN 165
Query: 1318 ADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLARKDDAPK 1178
+DD +P G NK VRSTRL+ERRSKQRKV KSK D E YL RK D +
Sbjct: 166 SDDPLPLGLASTSLAHSSLGKNKIVRSTRLKERRSKQRKVSKSKVLDEEKYLTRKFDVQR 225
Query: 1177 RLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKTSLQSQS 998
RL +EKK+ + L+ NDPL FLW P+TK+LL LE+ES+LIAQIQ+LLRL+E LQSQ
Sbjct: 226 RLRIEKKLKEGLEGNDPLRLFLWGPETKRLLNLEEESKLIAQIQDLLRLKETNIKLQSQF 285
Query: 997 GREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGLSLEDLL 818
GREPT+AEWA+G GLSCRALQA+L CGNRS++KLI ANLR+V HIAK YQGRGLSL+DLL
Sbjct: 286 GREPTLAEWADGVGLSCRALQARLHCGNRSKDKLINANLRLVVHIAKYYQGRGLSLQDLL 345
Query: 817 QEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQLGKILE 638
QEGSMGL++ V+KFKP+AGCRF +YAY WIRQTIR+A+F HS+TIRLPE YT LGK+ E
Sbjct: 346 QEGSMGLMRGVEKFKPKAGCRFSTYAYWWIRQTIRRALFLHSKTIRLPENFYTLLGKVTE 405
Query: 637 AKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTFQEIIAD 458
AKK YI+EGNLHPTKEE++R+VGI VDK++ LLF AR P+SM++ V ADQDTTFQEI AD
Sbjct: 406 AKKSYIKEGNLHPTKEEIARQVGITVDKLEMLLFTARTPLSMERAVWADQDTTFQEITAD 465
Query: 457 TAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEIFGLSRE 278
+AIE ++SVAKQLMR HV NLL +L PKERR+IRLRFG EDG +KSLS +G++ G+ +E
Sbjct: 466 SAIEIPNVSVAKQLMRSHVRNLLNVLNPKERRVIRLRFGIEDGYEKSLSDIGKVLGVCKE 525
Query: 277 RVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
RVRQLE++ KLK+ LVSQ LDAY DL+V
Sbjct: 526 RVRQLESQGLNKLKQNLVSQQLDAYVDLIV 555
>ref|XP_007162766.1| hypothetical protein PHAVU_001G178600g [Phaseolus vulgaris]
gi|561036230|gb|ESW34760.1| hypothetical protein
PHAVU_001G178600g [Phaseolus vulgaris]
Length = 550
Score = 649 bits (1674), Expect = 0.0
Identities = 348/570 (61%), Positives = 424/570 (74%), Gaps = 13/570 (2%)
Frame = -2
Query: 1858 MFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVLLQEQRD 1679
MF SSPPFP S S SV+ML EQAAP VASWS+S +A++FPTSVLLQEQR+
Sbjct: 1 MFSSSPPFP----------SSSSPSVMMLHEQAAPAVASWSSSSTARHFPTSVLLQEQRE 50
Query: 1678 EYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXXXXXXXN 1499
EYRPLLH++ ++ T LNTRQMDM SV E+++TG+ D +VHDF
Sbjct: 51 EYRPLLHVNNKEAT----LNTRQMDMTSVQEKSNTGNPDPLVHDFVHQLHLRSHLQNLLT 106
Query: 1498 STQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLKSIKADED 1319
T GI AS TLQ V DSERP D L NAVSLA++ALS SKQAAS S++ D+D
Sbjct: 107 CYPTRGIAASLTLQPVDNDSERPADGLPRNAVSLAQQALSASKQAAS------SVEVDDD 160
Query: 1318 ADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLARKDDAPK 1178
D + FG NK VRSTR+ ERRSKQRK KSK D E++L RK +
Sbjct: 161 DVDPLSFGLASTSLGVDSLKRNKIVRSTRIIERRSKQRKTSKSKLLDEESFLERKSYVQR 220
Query: 1177 RLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKTSLQSQS 998
+L +EKK+N+ DQNDPL FL P++++LLT E+ESQLI Q+Q+L RLEE+K LQSQ
Sbjct: 221 KLRLEKKLNEGFDQNDPLRMFLSDPESRQLLTREEESQLITQLQDLSRLEEVKIRLQSQI 280
Query: 997 GREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGLSLEDLL 818
REPT+AEWA+ GLSC ALQ QL C NRS+EKL AN+RMV HIAK YQGRGL+L+DLL
Sbjct: 281 RREPTLAEWADVLGLSCCALQTQLHCANRSKEKLFHANMRMVVHIAKYYQGRGLNLQDLL 340
Query: 817 QEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQLGKILE 638
QEGS GLLKS+ KFKP GCRFG+YAY WIR +IR+AIF HSRTIR+PE +Y LGK+LE
Sbjct: 341 QEGSTGLLKSIDKFKPGGGCRFGTYAYWWIRHSIRRAIFLHSRTIRVPENLYRLLGKVLE 400
Query: 637 AKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTFQEIIAD 458
AKK +IQEGN+HP+KEEL+RRVGI VDK++NLLF +R PISMQQ+V ADQ+TTFQEI AD
Sbjct: 401 AKKSFIQEGNIHPSKEELARRVGITVDKLENLLFTSRNPISMQQSVWADQETTFQEITAD 460
Query: 457 TAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEIFGLSRE 278
+AIE D+ V+KQLMRRHV NLL +L PKE+ I+RLRFG EDG++K+LS +G++FGL++E
Sbjct: 461 SAIEIPDVCVSKQLMRRHVHNLLNMLSPKEKSILRLRFGIEDGKEKTLSDIGKVFGLTKE 520
Query: 277 RVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
RVRQLE+RA KLK CL SQGLD+Y DLL+
Sbjct: 521 RVRQLESRALSKLKDCLESQGLDSYIDLLI 550
>ref|XP_014496115.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
[Vigna radiata var. radiata]
Length = 550
Score = 640 bits (1651), Expect = e-180
Identities = 346/570 (60%), Positives = 420/570 (73%), Gaps = 13/570 (2%)
Frame = -2
Query: 1858 MFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVLLQEQRD 1679
MF SSPPFP S S SV+ML EQAAP VASWS++ +A++FPTSVLLQEQR+
Sbjct: 1 MFSSSPPFP----------SSSSPSVMMLHEQAAPAVASWSSTSTARHFPTSVLLQEQRE 50
Query: 1678 EYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXXXXXXXN 1499
EYRPLLH ++ T LNTRQMDM SV E+ +TG+ DQ+VHDF
Sbjct: 51 EYRPLLHAYNKEAT----LNTRQMDMSSVQEKCNTGNPDQLVHDFVHQLHLRSHLQNLLT 106
Query: 1498 STQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLKSIKADED 1319
T I AS TLQ V DSERP D L NAVSLA++ALS SKQAAS SI+ D+D
Sbjct: 107 CYPTREIAASLTLQPVDNDSERPADGLPRNAVSLAQQALSASKQAAS------SIEVDDD 160
Query: 1318 ADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLARKDDAPK 1178
DD + FG NK VRSTR+ ERRSKQRK KS D E+YL RK +
Sbjct: 161 DDDPLSFGLASTSLVDSSLKRNKIVRSTRITERRSKQRKASKSNLLDEESYLDRKSFVQR 220
Query: 1177 RLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKTSLQSQS 998
+L +EKK+N+ DQNDPL FL ++++LLT E+ESQLI Q+Q+ RLEE+K LQSQ
Sbjct: 221 KLRLEKKLNEGFDQNDPLRMFLSGSESRQLLTREEESQLITQLQDFSRLEEVKIRLQSQL 280
Query: 997 GREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGLSLEDLL 818
REPT+AEWA+ GLSC ALQ QL C NRS+EKL AN+RMV HIAK YQGRGLSL+DL
Sbjct: 281 RREPTLAEWADVLGLSCCALQTQLHCVNRSKEKLFHANMRMVVHIAKHYQGRGLSLQDLF 340
Query: 817 QEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQLGKILE 638
QEGS GL+KS+ KFKP AGCRFG+YAY WIR +IRKAIF HSRTIR+PE +Y LGK++E
Sbjct: 341 QEGSTGLMKSIDKFKPGAGCRFGTYAYWWIRHSIRKAIFLHSRTIRIPENLYRLLGKVIE 400
Query: 637 AKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTFQEIIAD 458
AKKL+IQEGN++P+KEEL+RRVGI +DK++ L+FA+R PISMQQ V ADQ+TTFQEI AD
Sbjct: 401 AKKLFIQEGNINPSKEELARRVGITIDKLETLVFASRNPISMQQAVWADQETTFQEITAD 460
Query: 457 TAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEIFGLSRE 278
+AIE D+ V++QLMRRHV NLL +L PKE+ IIRLRFG EDG++K+LS +G++FGL++E
Sbjct: 461 SAIEIPDVCVSRQLMRRHVHNLLNMLSPKEKSIIRLRFGIEDGKEKTLSDIGKVFGLTKE 520
Query: 277 RVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
RVRQLE+RA KLK+CL SQGLDAY DLL+
Sbjct: 521 RVRQLESRALSKLKECLESQGLDAYTDLLI 550
>gb|KOM29307.1| hypothetical protein LR48_Vigan641s009500 [Vigna angularis]
Length = 549
Score = 638 bits (1646), Expect = e-180
Identities = 348/570 (61%), Positives = 419/570 (73%), Gaps = 13/570 (2%)
Frame = -2
Query: 1858 MFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVLLQEQRD 1679
MF SSPPFP S S SV+ML EQAAP VASWS+S +A++FPTSVLLQEQR+
Sbjct: 1 MFSSSPPFP----------SSSSPSVMMLHEQAAPAVASWSSSSTARHFPTSVLLQEQRE 50
Query: 1678 EYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXXXXXXXN 1499
EYRPLLH ++ T LNTRQMDM SV E+ +TG+ DQ+VHDF
Sbjct: 51 EYRPLLHAYNKEAT----LNTRQMDMSSVQEKCNTGNPDQLVHDFVHQLHLRSHLQNILT 106
Query: 1498 STQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLKSIKADED 1319
T I AS TLQ V DSERP D L NAVSLA++ALS SKQAAS S+ D+D
Sbjct: 107 CYPTREIAASLTLQPVDNDSERPADGLPRNAVSLAQQALSASKQAAS------SVGVDDD 160
Query: 1318 ADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLARKDDAPK 1178
DD + FG NK VRSTR+ ERRSKQRK KS D E+YL RK +
Sbjct: 161 -DDPLSFGLASTSLADSSLKRNKIVRSTRIIERRSKQRKASKSNLLDEESYLDRKSFVQR 219
Query: 1177 RLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKTSLQSQS 998
+L +EKK+N+ DQNDPL FL P++++LLT E+ESQLI Q+Q+ RLEE+K LQSQ
Sbjct: 220 KLRLEKKLNEGFDQNDPLRMFLSGPESRQLLTREEESQLITQLQDFSRLEEVKIRLQSQL 279
Query: 997 GREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGLSLEDLL 818
REPT+AEWA+ GLSC ALQ QL C NRS+EKL AN+RMV HIAK YQGRGLSL+DL
Sbjct: 280 RREPTLAEWADVLGLSCCALQTQLHCVNRSKEKLFHANMRMVVHIAKYYQGRGLSLQDLF 339
Query: 817 QEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQLGKILE 638
QEGS GL+KS+ KFKP AGCRFG+YAY WIR +IRKAIF HSRTIR+PE +Y LGK++E
Sbjct: 340 QEGSTGLMKSIDKFKPGAGCRFGTYAYWWIRHSIRKAIFLHSRTIRIPENLYRLLGKVIE 399
Query: 637 AKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTFQEIIAD 458
AKK +IQEGN++P+KEEL+RRVGI +DK++ LLFA+R PISMQQTV ADQ+TTFQEI AD
Sbjct: 400 AKKSFIQEGNINPSKEELARRVGITIDKLETLLFASRNPISMQQTVWADQETTFQEITAD 459
Query: 457 TAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEIFGLSRE 278
+AIE D+ V+KQLMRRHV NLL +L PKE+ IIRLRFG EDG++K+LS +G++FGL++E
Sbjct: 460 SAIEIPDVCVSKQLMRRHVHNLLSMLSPKEKSIIRLRFGIEDGKEKTLSDIGKVFGLTKE 519
Query: 277 RVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
RVRQLE RA KLK+CL S+GLDAY DLL+
Sbjct: 520 RVRQLETRALSKLKECLESEGLDAYIDLLI 549
>ref|XP_014496116.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
[Vigna radiata var. radiata]
Length = 532
Score = 626 bits (1614), Expect = e-176
Identities = 342/570 (60%), Positives = 416/570 (72%), Gaps = 13/570 (2%)
Frame = -2
Query: 1858 MFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVLLQEQRD 1679
MF SSPPFP S S SV+ML EQAAP VASWS++ +A++FPTSVLLQEQR+
Sbjct: 1 MFSSSPPFP----------SSSSPSVMMLHEQAAPAVASWSSTSTARHFPTSVLLQEQRE 50
Query: 1678 EYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXXXXXXXXXN 1499
EYRPLLH ++ T LNTRQMDM SV E+ +TG+ DQ+
Sbjct: 51 EYRPLLHAYNKEAT----LNTRQMDMSSVQEKCNTGNPDQLT------------------ 88
Query: 1498 STQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDLKSIKADED 1319
T I AS TLQ V DSERP D L NAVSLA++ALS SKQAAS SI+ D+D
Sbjct: 89 CYPTREIAASLTLQPVDNDSERPADGLPRNAVSLAQQALSASKQAAS------SIEVDDD 142
Query: 1318 ADDSIPFG-------------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLARKDDAPK 1178
DD + FG NK VRSTR+ ERRSKQRK KS D E+YL RK +
Sbjct: 143 DDDPLSFGLASTSLVDSSLKRNKIVRSTRITERRSKQRKASKSNLLDEESYLDRKSFVQR 202
Query: 1177 RLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKTSLQSQS 998
+L +EKK+N+ DQNDPL FL ++++LLT E+ESQLI Q+Q+ RLEE+K LQSQ
Sbjct: 203 KLRLEKKLNEGFDQNDPLRMFLSGSESRQLLTREEESQLITQLQDFSRLEEVKIRLQSQL 262
Query: 997 GREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGLSLEDLL 818
REPT+AEWA+ GLSC ALQ QL C NRS+EKL AN+RMV HIAK YQGRGLSL+DL
Sbjct: 263 RREPTLAEWADVLGLSCCALQTQLHCVNRSKEKLFHANMRMVVHIAKHYQGRGLSLQDLF 322
Query: 817 QEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQLGKILE 638
QEGS GL+KS+ KFKP AGCRFG+YAY WIR +IRKAIF HSRTIR+PE +Y LGK++E
Sbjct: 323 QEGSTGLMKSIDKFKPGAGCRFGTYAYWWIRHSIRKAIFLHSRTIRIPENLYRLLGKVIE 382
Query: 637 AKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTFQEIIAD 458
AKKL+IQEGN++P+KEEL+RRVGI +DK++ L+FA+R PISMQQ V ADQ+TTFQEI AD
Sbjct: 383 AKKLFIQEGNINPSKEELARRVGITIDKLETLVFASRNPISMQQAVWADQETTFQEITAD 442
Query: 457 TAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEIFGLSRE 278
+AIE D+ V++QLMRRHV NLL +L PKE+ IIRLRFG EDG++K+LS +G++FGL++E
Sbjct: 443 SAIEIPDVCVSRQLMRRHVHNLLNMLSPKEKSIIRLRFGIEDGKEKTLSDIGKVFGLTKE 502
Query: 277 RVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
RVRQLE+RA KLK+CL SQGLDAY DLL+
Sbjct: 503 RVRQLESRALSKLKECLESQGLDAYTDLLI 532
>ref|XP_003625673.1| RNA polymerase sigma factor [Medicago truncatula]
gi|355500688|gb|AES81891.1| RNA polymerase sigma factor
[Medicago truncatula]
Length = 557
Score = 603 bits (1555), Expect = e-169
Identities = 328/573 (57%), Positives = 415/573 (72%), Gaps = 16/573 (2%)
Frame = -2
Query: 1858 MFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTSVLLQEQRD 1679
MF S PFP R LPSPS ++ +QAAP ++SW T+F PTSVLLQE RD
Sbjct: 1 MFSPSTPFPSRI-----LPSPSV--MMPPHDQAAPALSSWPTTF-----PTSVLLQEHRD 48
Query: 1678 EYRPLLHISKED-KTCQAILNTRQMDMVSVHEENDTGSAD-------QVVHDFRQXXXXX 1523
EY+PLLH ED K QA LNTR DM S+ E+ TG D V + Q
Sbjct: 49 EYKPLLHTCNEDNKPPQATLNTRVTDMTSICEKIITGDGDGDGHVDVSVHNCMHQLHLRC 108
Query: 1522 XXXXXXXNSTQTGGIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAEDL 1343
+S + + +SS+ + + P D Q +A++LA++ALS SKQAA+VA++L
Sbjct: 109 HLQNLLASSPEEDFVSSSSSSS--SSSTMLPADGFQWDALTLAKQALSASKQAAAVAQEL 166
Query: 1342 KSIKADEDADDSIPFG--------NKTVRSTRLRERRSKQRKVPKSKAKDYETYLARKDD 1187
K +K D+D DS+P G NK VRS RL+ERRSKQRKV SK D E YL +K +
Sbjct: 167 KLVKIDDD--DSLPLGLADSSLGKNKIVRSIRLKERRSKQRKVSNSKVLDDEMYLTKKSN 224
Query: 1186 APKRLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKTSLQ 1007
+RL +EKK+ + LD N L FLWSP+TK+LL++E+ESQLIAQIQ+L +L+E K LQ
Sbjct: 225 VQRRLRLEKKLKEGLDGNHALRLFLWSPETKQLLSIEEESQLIAQIQDLFKLKETKIKLQ 284
Query: 1006 SQSGREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGLSLE 827
S GREPT+AEWA+G GLSCR LQ +L CGNRS++KLI ANLR+V HIAK YQGRGLSL+
Sbjct: 285 SHFGREPTLAEWADGVGLSCRDLQKRLHCGNRSKDKLIHANLRLVVHIAKYYQGRGLSLQ 344
Query: 826 DLLQEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQLGK 647
DLLQEGSMGL++SV+KFKPQAGCRF +YAY WIRQTIR+A+F HS+TIRLPE Y LGK
Sbjct: 345 DLLQEGSMGLMRSVEKFKPQAGCRFSTYAYWWIRQTIRRALFLHSKTIRLPENFYALLGK 404
Query: 646 ILEAKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTFQEI 467
I EAKK YI+EGNLHPTKEE+++RVGI VD+++ LLF+ R P+SM++ V AD DTTFQEI
Sbjct: 405 IAEAKKSYIKEGNLHPTKEEIAKRVGITVDRLEMLLFSTRTPLSMERAVWADSDTTFQEI 464
Query: 466 IADTAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEIFGL 287
AD++IE ++ VAKQLMR HV NLLGIL PKER+++RLRFG EDG +KSL+++G++ G+
Sbjct: 465 TADSSIEIPNVCVAKQLMRSHVRNLLGILPPKERKVLRLRFGIEDGYEKSLTEIGKVLGV 524
Query: 286 SRERVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
+ERVRQLE++A KLK+CLVSQ LDAY DL+V
Sbjct: 525 CKERVRQLESQALNKLKQCLVSQQLDAYVDLIV 557
>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Citrus sinensis]
Length = 569
Score = 600 bits (1548), Expect = e-168
Identities = 330/576 (57%), Positives = 414/576 (71%), Gaps = 13/576 (2%)
Frame = -2
Query: 1876 MQSARNMFCSSPPFPPRTHHWNTLPSP----SYTSVLMLREQAAPTVASWSTSFSAQNFP 1709
M++ RN+ S P FP RT ++L S S +SVLM EQ+AP VAS TS A++FP
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60
Query: 1708 TSVLLQEQRDEYRPLLHISKEDKTCQAILNTRQMDMVSVH-EENDTGSADQVVHDFRQXX 1532
TSVLLQEQRDEYRPLLH+ KEDKT QA ++R M+ + EE ++G DQ+V D
Sbjct: 61 TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQF 120
Query: 1531 XXXXXXXXXXNSTQTG-GIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASV 1355
+ G S T+Q ++ D+E VD +AV+LARKALS SK+AAS+
Sbjct: 121 LHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 180
Query: 1354 AEDLKSIKADEDADDSIPFGN-------KTVRSTRLRERRSKQRKVPKSKAKDYETYLAR 1196
AE+ K + E D S+ KTVRST+ ERRSK+RKV K K ++ETY +R
Sbjct: 181 AENPK-LNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHETYNSR 239
Query: 1195 KDDAPKRLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELKT 1016
K V+KK+++ D+NDPL FLW P+T+KLLT ++E +LIAQIQ+L+RLE+ K+
Sbjct: 240 KAS------VKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKS 293
Query: 1015 SLQSQSGREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRGL 836
LQSQ GREPT+ EWA+ GLSCR L+++L GN SREKLI ANLR+V H+AK YQGRG+
Sbjct: 294 KLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGI 353
Query: 835 SLEDLLQEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYTQ 656
L DLLQEGSMGL+KSV+KFKPQAGCRF SYAY W+RQTIRKAIF HSRTIRLPE +YT
Sbjct: 354 GLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTL 413
Query: 655 LGKILEAKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTTF 476
L ++LEAK+LYIQEGN P KE+L+RRVGI V+K++ L+F R+P+SMQQ V ADQDTTF
Sbjct: 414 LSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTF 473
Query: 475 QEIIADTAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGEI 296
QEI ADT +E D+SV KQLMR+HV NLL +L PKER I+RLRFG EDG+ KSLS+VG I
Sbjct: 474 QEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNI 533
Query: 295 FGLSRERVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
FGLS+ERVRQLE+RA Y+LK+ L + YADLL+
Sbjct: 534 FGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 569
>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 570
Score = 599 bits (1544), Expect = e-168
Identities = 329/577 (57%), Positives = 414/577 (71%), Gaps = 14/577 (2%)
Frame = -2
Query: 1876 MQSARNMFCSSPPFPPRTHHWNTLPSPSYTS-----VLMLREQAAPTVASWSTSFSAQNF 1712
M++ RN+ S P FP RT ++L S + +S VLM EQ+AP VAS TS A++F
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAVLMHNEQSAPAVASVPTSSVARHF 60
Query: 1711 PTSVLLQEQRDEYRPLLHISKEDKTCQAILNTRQMDMVSVH-EENDTGSADQVVHDFRQX 1535
PTSVLLQEQRDEYRPLLH+ KEDKT QA ++R M+ + EE ++G DQ+V D
Sbjct: 61 PTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQ 120
Query: 1534 XXXXXXXXXXXNSTQTG-GIDASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAAS 1358
+ G S T+Q ++ D+E VD +AV+LARKALS SK+AAS
Sbjct: 121 FLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAAS 180
Query: 1357 VAEDLKSIKADEDADDSIPFGN-------KTVRSTRLRERRSKQRKVPKSKAKDYETYLA 1199
+AE+ K + E D S+ KTVRST+ ERRSK+RKV K K ++ETY +
Sbjct: 181 LAENPK-LNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHETYNS 239
Query: 1198 RKDDAPKRLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELK 1019
RK V+KK+++ D+NDPL FLW P+T+KLLT ++E +LIAQIQ+L+RLE+ K
Sbjct: 240 RKAS------VKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEK 293
Query: 1018 TSLQSQSGREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRG 839
+ LQSQ GREPT+ EWA+ GLSCR L+++L GN SREKLI ANLR+V H+AK YQGRG
Sbjct: 294 SKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRG 353
Query: 838 LSLEDLLQEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYT 659
+ L DLLQEGSMGL+KSV+KFKPQAGCRF SYAY W+RQTIRKAIF HSRTIRLPE +YT
Sbjct: 354 IGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYT 413
Query: 658 QLGKILEAKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTT 479
L ++LEAK+LYIQEGN P KE+L+RRVGI V+K++ L+F R+P+SMQQ V ADQDTT
Sbjct: 414 LLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTT 473
Query: 478 FQEIIADTAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGE 299
FQEI ADT +E D+SV KQLMR+HV NLL +L PKER I+RLRFG EDG+ KSLS+VG
Sbjct: 474 FQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGN 533
Query: 298 IFGLSRERVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
IFGLS+ERVRQLE+RA Y+LK+ L + YADLL+
Sbjct: 534 IFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 570
>ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Vitis
vinifera]
Length = 567
Score = 594 bits (1532), Expect = e-167
Identities = 320/577 (55%), Positives = 409/577 (70%), Gaps = 12/577 (2%)
Frame = -2
Query: 1882 SAMQSARNMFCSSPPFPPRTHHWNTLPSPSYTSVLMLREQAAPTVASWSTSFSAQNFPTS 1703
S+M++ N+ S+P FPPRTH N S +SVLML +Q AP VAS T+ A+ FPTS
Sbjct: 5 SSMEAGTNILSSTPSFPPRTHFRN-----SSSSVLMLHDQVAPAVASIPTTI-ARKFPTS 58
Query: 1702 VLLQEQRDEYRPLLHISKEDKTCQAILNTRQMDMVSVHEENDTGSADQVVHDFRQXXXXX 1523
VLLQEQRDEYRP K+++T QA L RQM++V +E ++ +Q + +F +
Sbjct: 59 VLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIVVSADEENSDDHNQYMVNFERQLLLQ 118
Query: 1522 XXXXXXXNSTQTGGID--ASSTLQHVTVDSERPVDILQCNAVSLARKALSPSKQAASVAE 1349
S+QTG +SS ++ +T D E +D+ C+ ++LA+KALS SKQA S+ E
Sbjct: 119 PGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQAVSLYE 178
Query: 1348 DLKSIKAD-EDADD---------SIPFGNKTVRSTRLRERRSKQRKVPKSKAKDYETYLA 1199
+ K + AD ED+ ++P KTVRSTRL ERRSK+R+ PK
Sbjct: 179 NAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKRRNPK--------VAV 230
Query: 1198 RKDDAPKRLHVEKKINKELDQNDPLHSFLWSPDTKKLLTLEQESQLIAQIQELLRLEELK 1019
++ +R V++KIN+ D DPL FLW P+T+KLLT ++ES+LI QIQEL+RLEE+K
Sbjct: 231 HENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVK 290
Query: 1018 TSLQSQSGREPTMAEWAEGAGLSCRALQAQLRCGNRSREKLIQANLRMVHHIAKTYQGRG 839
LQS REPT+ EWAE GLSC+ LQ+QL GNRSR+KLI ANLRMV HIAK YQGRG
Sbjct: 291 KRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRG 350
Query: 838 LSLEDLLQEGSMGLLKSVKKFKPQAGCRFGSYAYLWIRQTIRKAIFHHSRTIRLPERVYT 659
L+L+DLLQEGSMGL+ SV+KFKP AGCRF SYAY WIRQ +RKAIF HSRTIRLPE +Y+
Sbjct: 351 LNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYS 410
Query: 658 QLGKILEAKKLYIQEGNLHPTKEELSRRVGIAVDKIDNLLFAARVPISMQQTVSADQDTT 479
LGK+ EAK+L+IQEG+ PTKEE++ RVGI ++K+ LL R+P+SMQQ V ADQDTT
Sbjct: 411 LLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTT 470
Query: 478 FQEIIADTAIESTDMSVAKQLMRRHVLNLLGILRPKERRIIRLRFGFEDGEQKSLSQVGE 299
FQE+ ADT IE D+SVAKQLMR+HV NLL +L PKERRIIRLRFG DG ++LS++G
Sbjct: 471 FQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLSEIGL 530
Query: 298 IFGLSRERVRQLENRAFYKLKKCLVSQGLDAYADLLV 188
+FG S+ERVRQLE RA +KLK+CL S GL++Y DLLV
Sbjct: 531 VFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 567