BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Wisteria21_contig00014636
         (2528 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004498236.1| PREDICTED: probable RNA-dependent RNA polyme...  1353   0.0  
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1315   0.0  
ref|XP_013466603.1| RNA-directed RNA polymerase [Medicago trunca...  1312   0.0  
ref|XP_007153214.1| hypothetical protein PHAVU_003G016600g [Phas...  1292   0.0  
ref|XP_007153213.1| hypothetical protein PHAVU_003G016600g [Phas...  1292   0.0  
ref|XP_013466608.1| RNA-directed RNA polymerase [Medicago trunca...  1288   0.0  
gb|KOM46251.1| hypothetical protein LR48_Vigan06g155700 [Vigna a...  1283   0.0  
ref|XP_014520607.1| PREDICTED: probable RNA-dependent RNA polyme...  1279   0.0  
ref|XP_013466600.1| RNA-directed RNA polymerase [Medicago trunca...  1278   0.0  
ref|XP_013466601.1| RNA-directed RNA polymerase [Medicago trunca...  1278   0.0  
ref|XP_014520611.1| PREDICTED: probable RNA-dependent RNA polyme...  1226   0.0  
ref|XP_014520609.1| PREDICTED: probable RNA-dependent RNA polyme...  1226   0.0  
gb|KOM46252.1| hypothetical protein LR48_Vigan06g155800 [Vigna a...  1224   0.0  
ref|XP_011463162.1| PREDICTED: probable RNA-dependent RNA polyme...  1211   0.0  
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1 is...  1211   0.0  
ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1200   0.0  
ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1199   0.0  
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...  1195   0.0  
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]     1187   0.0  
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1184   0.0  

>ref|XP_004498236.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1 [Cicer
            arietinum]
          Length = 1126

 Score = 1353 bits (3501), Expect = 0.0
 Identities = 678/840 (80%), Positives = 727/840 (86%), Gaps = 2/840 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VNSLVQH CLSG  LDN FY LVDP R+NV+FIEHALE+MYYSKDFCY+P  WL DQY  
Sbjct: 293  VNSLVQHGCLSGSELDNAFYCLVDPLRINVDFIEHALEKMYYSKDFCYEPARWLKDQYRM 352

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            YL S  P +SP++SLD GLVYVRRVQITPCKVYFCGPEINVSNRV+RHFH+HIDNFLRVS
Sbjct: 353  YLNSNYPLQSPSISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVVRHFHEHIDNFLRVS 412

Query: 2168 FVDEELEKLYSTDLSSRTSE--KTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENSL 1995
            FVDEEL+KLYSTDLSSR S   +TE+Y RILSILR+GIVIGDKKFEFLAFSSSQLRENSL
Sbjct: 413  FVDEELDKLYSTDLSSRISVGVRTEVYNRILSILRNGIVIGDKKFEFLAFSSSQLRENSL 472

Query: 1994 WMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDVN 1815
            WMFAPT TG TA  IR WMGDF +IRNVAKYAARLGQSFGSSTETLSVNR+EIEII D  
Sbjct: 473  WMFAPTATGLTAQFIRAWMGDFSQIRNVAKYAARLGQSFGSSTETLSVNRNEIEIIPDAQ 532

Query: 1814 VSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKLS 1635
            V H  IEYVFSDGIGKISLEFARRVAKKCGY+S+PSAFQIRYGGYKGVVA+DPTSS KLS
Sbjct: 533  VKHDTIEYVFSDGIGKISLEFARRVAKKCGYDSTPSAFQIRYGGYKGVVAVDPTSSVKLS 592

Query: 1634 LRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNTM 1455
            LR+SM KYDS NTKLDVLACSK QPCYLNRQLITLLSTL V+DS FEKKQKEAVNQLNT+
Sbjct: 593  LRKSMYKYDSDNTKLDVLACSKYQPCYLNRQLITLLSTLKVEDSVFEKKQKEAVNQLNTI 652

Query: 1454 LTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTRI 1275
            LT+SLKA E LDLMS+GEITNILKEML CGYKPNVEPFLSMMLQTFRASKLL+LRQKTRI
Sbjct: 653  LTNSLKAQEVLDLMSTGEITNILKEMLFCGYKPNVEPFLSMMLQTFRASKLLELRQKTRI 712

Query: 1274 FIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKSYIVMGKVVVAKNP 1095
            FIPKGRAMMG LDETRTLEYG+VFVQ+SNNR+ SL     SYGSA S +V GKVVVAKNP
Sbjct: 713  FIPKGRAMMGVLDETRTLEYGEVFVQYSNNRISSL-----SYGSANSLVVTGKVVVAKNP 767

Query: 1094 CLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIPP 915
            CLHPGDVRVLKAV+VPALHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIPP
Sbjct: 768  CLHPGDVRVLKAVDVPALHHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDPELIPP 827

Query: 914  RTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAEP 735
             T EPM+Y    P+VL HDV IEEVEEYFTNYI+NDSLGIIANAH VFADK+P KA AEP
Sbjct: 828  ETTEPMEYASVQPIVLYHDVEIEEVEEYFTNYILNDSLGIIANAHIVFADKEPAKAKAEP 887

Query: 734  CIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQXX 555
            CIELAKLFSIAVDFPKTG+PAVIPPHL+ KEYPDFMEKPDK TY S NVIGKLFRE+Q  
Sbjct: 888  CIELAKLFSIAVDFPKTGIPAVIPPHLFAKEYPDFMEKPDKTTYKSNNVIGKLFREIQGI 947

Query: 554  XXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEAE 375
                      TLEVA +SYDPDME DGFMDYVDDAFYHK+NYDYKLGNLMDYYGIK E+E
Sbjct: 948  PSRDGSITSFTLEVAKKSYDPDMEFDGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKNESE 1007

Query: 374  ILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXXXXXAWYH 195
            ILSGNIM+MSKSF KRRD DAINMAVRSLRKEAR+WFN                  AWY+
Sbjct: 1008 ILSGNIMRMSKSFNKRRDGDAINMAVRSLRKEARSWFNDDATGVDSGSVDAYAKASAWYY 1067

Query: 194  VTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYTDLSLEHSFNHGLRIN 15
            VTYH SYWG YNEGM+RDH+LSFPWCVY  LVQIKKEKARMR +  +SLE SF+  LR++
Sbjct: 1068 VTYHHSYWGSYNEGMKRDHFLSFPWCVYHLLVQIKKEKARMRMHA-VSLEQSFSRRLRLD 1126


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
            max] gi|571439308|ref|XP_006574822.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
            max] gi|571439310|ref|XP_006574823.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
            max] gi|734360586|gb|KHN15461.1| RNA-dependent RNA
            polymerase 1 [Glycine soja] gi|947122157|gb|KRH70363.1|
            hypothetical protein GLYMA_02G086100 [Glycine max]
          Length = 1125

 Score = 1315 bits (3402), Expect = 0.0
 Identities = 660/841 (78%), Positives = 728/841 (86%), Gaps = 3/841 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VNSLVQH CL+GP LD DFY LVDPRRM  EFIE+ALE++YYSK+FCY+P  WL DQY  
Sbjct: 289  VNSLVQHACLAGPALDGDFYRLVDPRRMPREFIEYALEKIYYSKEFCYEPTKWLTDQYKT 348

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            YL+S+N PRSP +SLDTGLVYVRRVQITPCKVYFCGPE+NVSNRVLRHF +HIDNFLRVS
Sbjct: 349  YLESKNHPRSPAISLDTGLVYVRRVQITPCKVYFCGPEMNVSNRVLRHFREHIDNFLRVS 408

Query: 2168 FVDEELEKLYSTDLSSRT-SEKTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENSLW 1992
            FVDEEL+KL+STDLSSR+ ++KTEIY RILSIL++GIV+GDKKFEFLAFSSSQLRENSLW
Sbjct: 409  FVDEELDKLFSTDLSSRSQNKKTEIYTRILSILKNGIVVGDKKFEFLAFSSSQLRENSLW 468

Query: 1991 MFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDVN- 1815
            MFAPT TGCTAA+IR+WMG+F +IRNVAKYAARLGQSFGSSTETLSV+RDE+EII DV  
Sbjct: 469  MFAPTETGCTAAYIRKWMGNFSQIRNVAKYAARLGQSFGSSTETLSVHRDEVEIIPDVKK 528

Query: 1814 VSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKLS 1635
            +++ G EYVFSDGIGKISLEFA++VAKKCGY+ +PSAFQIRYGGYKGVVA+DP S  KLS
Sbjct: 529  LTYDGNEYVFSDGIGKISLEFAQKVAKKCGYDCTPSAFQIRYGGYKGVVAVDPKSCYKLS 588

Query: 1634 LRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNTM 1455
            LR+SMRKYDS NTKLDVLA SK QPCYLNRQLI+LLSTL +KD  FEKKQ+E VNQLNT+
Sbjct: 589  LRKSMRKYDSDNTKLDVLARSKFQPCYLNRQLISLLSTLGIKDDVFEKKQRETVNQLNTI 648

Query: 1454 LTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTRI 1275
            LTDSLKA E LDLMS+GEITN+LKEMLICGYKPN EPFLSMMLQTFRASKLL+LR K+RI
Sbjct: 649  LTDSLKAQEVLDLMSAGEITNVLKEMLICGYKPNEEPFLSMMLQTFRASKLLELRLKSRI 708

Query: 1274 FIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKSYIVMGKVVVAKNP 1095
            FIPKGRAMMGCLDETRTLEYGQVFVQFSNNRL +LSDD  SY   K+Y+V GKVVVAKNP
Sbjct: 709  FIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLQNLSDDFFSYDLPKNYMVKGKVVVAKNP 768

Query: 1094 CLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIPP 915
            CLHPGDVRVL+AV+VP L+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP 
Sbjct: 769  CLHPGDVRVLQAVDVPDLYHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDHELIPS 828

Query: 914  RTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAEP 735
            R I+PMDYT    + LDHDVMIEEVEEYF NYIVNDSLGIIANAHTVFADK+  KAM++ 
Sbjct: 829  RPIDPMDYTAPATVELDHDVMIEEVEEYFANYIVNDSLGIIANAHTVFADKEHLKAMSDQ 888

Query: 734  CIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQXX 555
            C++LA+LFS AVDFPKTGVPAVIPP L+VKEYPDFMEKPDKPTY S+NVIGKLFREV+  
Sbjct: 889  CVKLARLFSTAVDFPKTGVPAVIPPELHVKEYPDFMEKPDKPTYKSHNVIGKLFREVKEI 948

Query: 554  XXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEAE 375
                      T  VA  SYD +MEVDGFMDYVDDAFYHK+NYDYKLGNLMDYYGIKTEAE
Sbjct: 949  STSAGSITSFTKLVARDSYDHEMEVDGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAE 1008

Query: 374  ILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFN-XXXXXXXXXXXXXXXXXXAWY 198
            IL GNIMKMSKSF KRRDA+AINMAVRSLRKEAR WFN                   AWY
Sbjct: 1009 ILGGNIMKMSKSFNKRRDAEAINMAVRSLRKEARAWFNENSSGDVDSGSSDVYAKASAWY 1068

Query: 197  HVTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYTDLSLEHSFNHGLRI 18
            HVTYHPSYWG YNEGM RDHYLSF WCVY  LVQIKKEK  +R+    SLE+SF+ GLR+
Sbjct: 1069 HVTYHPSYWGCYNEGMNRDHYLSFSWCVYPLLVQIKKEKLSIRR---SSLEYSFS-GLRL 1124

Query: 17   N 15
            +
Sbjct: 1125 S 1125


>ref|XP_013466603.1| RNA-directed RNA polymerase [Medicago truncatula]
            gi|657401686|gb|KEH40645.1| RNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1114

 Score = 1312 bits (3395), Expect = 0.0
 Identities = 663/840 (78%), Positives = 716/840 (85%), Gaps = 2/840 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VNSLVQH CLSG  LDNDFY LVDP  +NVE I+HALE+MYYSKDFCY+P  WL  QY R
Sbjct: 288  VNSLVQHGCLSGSELDNDFYRLVDPLGINVELIKHALEKMYYSKDFCYEPARWLKGQYRR 347

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            YL++ NPPRSPT+SLD GLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS
Sbjct: 348  YLRANNPPRSPTISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 407

Query: 2168 FVDEELEKLYSTDLSSRTSE--KTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENSL 1995
            FVDEEL+ +YS DLSSR SE  +TEIY RILSILR+GI IG  KFEFLAFSSSQLRENSL
Sbjct: 408  FVDEELDNMYSADLSSRISENGRTEIYYRILSILRNGIDIGGMKFEFLAFSSSQLRENSL 467

Query: 1994 WMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDVN 1815
            WMFA TTTG TA  IREWMGDF RI+NVAKYAARLGQSFGSSTETLSV R+EIEII D  
Sbjct: 468  WMFARTTTGLTADSIREWMGDFSRIKNVAKYAARLGQSFGSSTETLSVRRNEIEIIPDAK 527

Query: 1814 VSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKLS 1635
            V HG  EYVFSDGIGKISLE ARRVAKKCG++S PSAFQIRYGGYKGVVA+DPTSS KLS
Sbjct: 528  VKHGATEYVFSDGIGKISLELARRVAKKCGHDSVPSAFQIRYGGYKGVVAVDPTSSVKLS 587

Query: 1634 LRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNTM 1455
            LR+SM KYDS N KLDVLACSK QPCYLNRQLITLL TL+VKDS FEKKQKEAV QLNT+
Sbjct: 588  LRKSMHKYDSDNIKLDVLACSKFQPCYLNRQLITLLCTLDVKDSVFEKKQKEAVTQLNTI 647

Query: 1454 LTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTRI 1275
            LTDS KAHE LDLM SGE+TNILKEMLICGYKP+VEPFLSMMLQTFRASKLL+LRQKTRI
Sbjct: 648  LTDSTKAHEVLDLMCSGEVTNILKEMLICGYKPDVEPFLSMMLQTFRASKLLELRQKTRI 707

Query: 1274 FIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKSYIVMGKVVVAKNP 1095
            FIPKGRAMMG LDETRTLEYG+VFVQ+S+NR            S+ S +V G V+VAKNP
Sbjct: 708  FIPKGRAMMGVLDETRTLEYGEVFVQYSSNRF-----------SSHSRVVKGMVIVAKNP 756

Query: 1094 CLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIPP 915
            CLHPGDVRVLKAV+VPAL HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIPP
Sbjct: 757  CLHPGDVRVLKAVDVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPP 816

Query: 914  RTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAEP 735
             TI+PM+Y  A P+VLDHDV IEEVEEYFTNYI+NDSLGIIANAHTVFADK+P KAM+EP
Sbjct: 817  LTIDPMEYDSAQPIVLDHDVEIEEVEEYFTNYILNDSLGIIANAHTVFADKEPAKAMSEP 876

Query: 734  CIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQXX 555
            CIELAKLFSIAVDFPKTG+PAVIP  L+ KEYPDFMEK DK TY S NVIGKLFRE+Q  
Sbjct: 877  CIELAKLFSIAVDFPKTGIPAVIPRELFAKEYPDFMEKADKTTYKSDNVIGKLFREIQGI 936

Query: 554  XXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEAE 375
                      TLEVA +SYDPDMEVDGFMDYVDDAFY+KSNYD KLGNLMDYYGIKTE+E
Sbjct: 937  STKDGSITSFTLEVAKKSYDPDMEVDGFMDYVDDAFYYKSNYDEKLGNLMDYYGIKTESE 996

Query: 374  ILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXXXXXAWYH 195
            ILSGNIMKM+KSFTKRRDADAI MAVRSLRKEAR+WFN                  AWY+
Sbjct: 997  ILSGNIMKMAKSFTKRRDADAITMAVRSLRKEARSWFNDGSASVDSGSDDAYAKASAWYY 1056

Query: 194  VTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYTDLSLEHSFNHGLRIN 15
            VTYH SY+G YNEGM+RDH+LSFPWCVY  LVQIKKEKARMR ++  S+E SF+  LR++
Sbjct: 1057 VTYHHSYYGLYNEGMQRDHFLSFPWCVYHLLVQIKKEKARMRMHS--SIEQSFSCRLRLD 1114


>ref|XP_007153214.1| hypothetical protein PHAVU_003G016600g [Phaseolus vulgaris]
            gi|593705717|ref|XP_007153215.1| hypothetical protein
            PHAVU_003G016600g [Phaseolus vulgaris]
            gi|561026568|gb|ESW25208.1| hypothetical protein
            PHAVU_003G016600g [Phaseolus vulgaris]
            gi|561026569|gb|ESW25209.1| hypothetical protein
            PHAVU_003G016600g [Phaseolus vulgaris]
          Length = 1122

 Score = 1292 bits (3344), Expect = 0.0
 Identities = 640/825 (77%), Positives = 710/825 (86%), Gaps = 2/825 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VNSLVQH CL GP L+ DFY LVDPRRM ++FIE+ALE++YYSK+FCY+P  WL +QY +
Sbjct: 293  VNSLVQHACLPGPALNADFYRLVDPRRMPLDFIENALEKLYYSKEFCYEPAKWLTNQYNK 352

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            YL+S++ PRSPT+SLD GLVYVRRVQITPCKVYFCGPE+NVSNRVLRHFH+H+DNF+RVS
Sbjct: 353  YLKSKHHPRSPTISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFHEHLDNFIRVS 412

Query: 2168 FVDEELEKLYSTDLSSRTSEKTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENSLWM 1989
            FVDEEL+K++STDLSSR  +KTE+Y+RIL IL++GI+IGDKKFEFLAFSSSQLRENSLWM
Sbjct: 413  FVDEELDKMFSTDLSSRAQKKTEVYKRILDILKNGILIGDKKFEFLAFSSSQLRENSLWM 472

Query: 1988 FAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDVNVS 1809
            FAPT TGC+AA IREWMG+F RIRNVAKYAARLGQSFGSSTETLSV RDEIEII DV  +
Sbjct: 473  FAPTGTGCSAAFIREWMGNFSRIRNVAKYAARLGQSFGSSTETLSVRRDEIEIIHDVKRT 532

Query: 1808 HGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKLSLR 1629
             GGIEYVFSDGIGKISLEFA+RVAKKCGY+ +PSAFQIRYGGYKGVVA+DP S  KLSLR
Sbjct: 533  CGGIEYVFSDGIGKISLEFAKRVAKKCGYDCTPSAFQIRYGGYKGVVAVDPESPYKLSLR 592

Query: 1628 ESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNTMLT 1449
             SMRKYDS NTKLDVL  SK QPC+LNRQLITLLSTL +KD  FEKKQ+EAV+QLNT+LT
Sbjct: 593  NSMRKYDSDNTKLDVLGRSKFQPCFLNRQLITLLSTLGIKDGVFEKKQREAVDQLNTILT 652

Query: 1448 DSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTRIFI 1269
            DSLKA E LDLMS+GEITN+LKEMLICGYKPN EPFLSMMLQ FRASKLL+LR K+RIFI
Sbjct: 653  DSLKAQEVLDLMSTGEITNVLKEMLICGYKPNEEPFLSMMLQVFRASKLLELRLKSRIFI 712

Query: 1268 PKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVS-SYGSAKSYIVMGKVVVAKNPC 1092
            PKGRAMMGCLDET TLEYGQVFVQFSNNRL  LSDD S SY   K+Y+V+GKVVVAKNPC
Sbjct: 713  PKGRAMMGCLDETSTLEYGQVFVQFSNNRLRDLSDDDSCSYDLPKTYMVVGKVVVAKNPC 772

Query: 1091 LHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIPPR 912
            LHPGDVRVL+AV+VP L+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPEL+P  
Sbjct: 773  LHPGDVRVLQAVDVPDLYHMVDCVVFPQKGTRPHPNECSGSDLDGDIYFVCWDPELVPSG 832

Query: 911  TIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAEPC 732
             ++PMDYTP+  + LDHDV IEEVEEYF NYIVNDSLGIIANAHTVFAD +P KAM+  C
Sbjct: 833  EVQPMDYTPSSTIELDHDVTIEEVEEYFCNYIVNDSLGIIANAHTVFADNQPGKAMSAQC 892

Query: 731  IELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQXXX 552
            ++LAKLFS AVDFPKTGVPAVIP  LY KEYPDFMEK DK TY S NVIGKLFREV+   
Sbjct: 893  LQLAKLFSTAVDFPKTGVPAVIPRELYAKEYPDFMEKSDKVTYKSPNVIGKLFREVKEIS 952

Query: 551  XXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEAEI 372
                       EVA +SYD +MEVDGFMDYVDDA Y+K+NYDYKLGNLMDYYGIKTE EI
Sbjct: 953  ADDSISSFTQ-EVARRSYDTEMEVDGFMDYVDDAIYYKTNYDYKLGNLMDYYGIKTEGEI 1011

Query: 371  LSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXXXXXAWYHV 192
            LSGNI KMSKSF KRRDA+A+N+AVRSLRKEAR+WFN                  AWYHV
Sbjct: 1012 LSGNITKMSKSFNKRRDAEAVNVAVRSLRKEARSWFN-----EGSSDDDAYAKASAWYHV 1066

Query: 191  TYHPSYWGRYN-EGMERDHYLSFPWCVYSQLVQIKKEKARMRKYT 60
            TYHPS+WG YN EGM RDHYLSFPWCVY QL+QIKKEK  MR Y+
Sbjct: 1067 TYHPSFWGSYNDEGMNRDHYLSFPWCVYPQLLQIKKEKMSMRNYS 1111


>ref|XP_007153213.1| hypothetical protein PHAVU_003G016600g [Phaseolus vulgaris]
            gi|561026567|gb|ESW25207.1| hypothetical protein
            PHAVU_003G016600g [Phaseolus vulgaris]
          Length = 1145

 Score = 1292 bits (3344), Expect = 0.0
 Identities = 640/825 (77%), Positives = 710/825 (86%), Gaps = 2/825 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VNSLVQH CL GP L+ DFY LVDPRRM ++FIE+ALE++YYSK+FCY+P  WL +QY +
Sbjct: 316  VNSLVQHACLPGPALNADFYRLVDPRRMPLDFIENALEKLYYSKEFCYEPAKWLTNQYNK 375

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            YL+S++ PRSPT+SLD GLVYVRRVQITPCKVYFCGPE+NVSNRVLRHFH+H+DNF+RVS
Sbjct: 376  YLKSKHHPRSPTISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFHEHLDNFIRVS 435

Query: 2168 FVDEELEKLYSTDLSSRTSEKTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENSLWM 1989
            FVDEEL+K++STDLSSR  +KTE+Y+RIL IL++GI+IGDKKFEFLAFSSSQLRENSLWM
Sbjct: 436  FVDEELDKMFSTDLSSRAQKKTEVYKRILDILKNGILIGDKKFEFLAFSSSQLRENSLWM 495

Query: 1988 FAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDVNVS 1809
            FAPT TGC+AA IREWMG+F RIRNVAKYAARLGQSFGSSTETLSV RDEIEII DV  +
Sbjct: 496  FAPTGTGCSAAFIREWMGNFSRIRNVAKYAARLGQSFGSSTETLSVRRDEIEIIHDVKRT 555

Query: 1808 HGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKLSLR 1629
             GGIEYVFSDGIGKISLEFA+RVAKKCGY+ +PSAFQIRYGGYKGVVA+DP S  KLSLR
Sbjct: 556  CGGIEYVFSDGIGKISLEFAKRVAKKCGYDCTPSAFQIRYGGYKGVVAVDPESPYKLSLR 615

Query: 1628 ESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNTMLT 1449
             SMRKYDS NTKLDVL  SK QPC+LNRQLITLLSTL +KD  FEKKQ+EAV+QLNT+LT
Sbjct: 616  NSMRKYDSDNTKLDVLGRSKFQPCFLNRQLITLLSTLGIKDGVFEKKQREAVDQLNTILT 675

Query: 1448 DSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTRIFI 1269
            DSLKA E LDLMS+GEITN+LKEMLICGYKPN EPFLSMMLQ FRASKLL+LR K+RIFI
Sbjct: 676  DSLKAQEVLDLMSTGEITNVLKEMLICGYKPNEEPFLSMMLQVFRASKLLELRLKSRIFI 735

Query: 1268 PKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVS-SYGSAKSYIVMGKVVVAKNPC 1092
            PKGRAMMGCLDET TLEYGQVFVQFSNNRL  LSDD S SY   K+Y+V+GKVVVAKNPC
Sbjct: 736  PKGRAMMGCLDETSTLEYGQVFVQFSNNRLRDLSDDDSCSYDLPKTYMVVGKVVVAKNPC 795

Query: 1091 LHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIPPR 912
            LHPGDVRVL+AV+VP L+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPEL+P  
Sbjct: 796  LHPGDVRVLQAVDVPDLYHMVDCVVFPQKGTRPHPNECSGSDLDGDIYFVCWDPELVPSG 855

Query: 911  TIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAEPC 732
             ++PMDYTP+  + LDHDV IEEVEEYF NYIVNDSLGIIANAHTVFAD +P KAM+  C
Sbjct: 856  EVQPMDYTPSSTIELDHDVTIEEVEEYFCNYIVNDSLGIIANAHTVFADNQPGKAMSAQC 915

Query: 731  IELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQXXX 552
            ++LAKLFS AVDFPKTGVPAVIP  LY KEYPDFMEK DK TY S NVIGKLFREV+   
Sbjct: 916  LQLAKLFSTAVDFPKTGVPAVIPRELYAKEYPDFMEKSDKVTYKSPNVIGKLFREVKEIS 975

Query: 551  XXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEAEI 372
                       EVA +SYD +MEVDGFMDYVDDA Y+K+NYDYKLGNLMDYYGIKTE EI
Sbjct: 976  ADDSISSFTQ-EVARRSYDTEMEVDGFMDYVDDAIYYKTNYDYKLGNLMDYYGIKTEGEI 1034

Query: 371  LSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXXXXXAWYHV 192
            LSGNI KMSKSF KRRDA+A+N+AVRSLRKEAR+WFN                  AWYHV
Sbjct: 1035 LSGNITKMSKSFNKRRDAEAVNVAVRSLRKEARSWFN-----EGSSDDDAYAKASAWYHV 1089

Query: 191  TYHPSYWGRYN-EGMERDHYLSFPWCVYSQLVQIKKEKARMRKYT 60
            TYHPS+WG YN EGM RDHYLSFPWCVY QL+QIKKEK  MR Y+
Sbjct: 1090 TYHPSFWGSYNDEGMNRDHYLSFPWCVYPQLLQIKKEKMSMRNYS 1134


>ref|XP_013466608.1| RNA-directed RNA polymerase [Medicago truncatula]
            gi|657401690|gb|KEH40649.1| RNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1726

 Score = 1288 bits (3332), Expect = 0.0
 Identities = 645/840 (76%), Positives = 708/840 (84%), Gaps = 2/840 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VN+LVQH CLSG  LDNDFY LVDP +M  + +EHALE+MYYSKDFCY+P  WL DQY  
Sbjct: 900  VNALVQHGCLSGSELDNDFYRLVDPLKMTSDCVEHALEKMYYSKDFCYEPARWLKDQYKM 959

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            Y++S   P SPT+SLD GLVYVRRVQITP KVYFCGPEINVSNRVLR FH+HIDNFLRVS
Sbjct: 960  YIKSNYLPPSPTISLDDGLVYVRRVQITPSKVYFCGPEINVSNRVLRRFHKHIDNFLRVS 1019

Query: 2168 FVDEELEKLYSTDLSSRTSE--KTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENSL 1995
            FVDE L+KLYS DLSS  SE  +T+IY RILSILR+GI IG KKFEFLAFSSSQLRENSL
Sbjct: 1020 FVDEGLDKLYSADLSSHISESGRTKIYYRILSILRNGIDIGGKKFEFLAFSSSQLRENSL 1079

Query: 1994 WMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDVN 1815
            WMF+PTTTG TA  IREWMGDF RI+NVAKYAARLGQSFGSSTETLSV+R+EIE I DV 
Sbjct: 1080 WMFSPTTTGLTADSIREWMGDFSRIKNVAKYAARLGQSFGSSTETLSVSRNEIETISDVK 1139

Query: 1814 VSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKLS 1635
            V HG  +YVFSDGIGKIS+E ARRVAKKCG++S PSAFQIRY G+KGVVA+DPTSS KLS
Sbjct: 1140 VKHGATKYVFSDGIGKISIELARRVAKKCGHDSMPSAFQIRYCGFKGVVAVDPTSSLKLS 1199

Query: 1634 LRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNTM 1455
            LR+SM KYDS N KLDVLACSK QPCYLNRQLITLLSTL+VKDS FEKKQ++ VNQLNT+
Sbjct: 1200 LRKSMHKYDSDNIKLDVLACSKFQPCYLNRQLITLLSTLDVKDSVFEKKQRKVVNQLNTI 1259

Query: 1454 LTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTRI 1275
            LTDS+KAHE LDLM SGE+ NILK+MLICGYKPN+EPFLSMMLQTFRASKLL+LRQ+TRI
Sbjct: 1260 LTDSMKAHEVLDLMFSGEVANILKDMLICGYKPNIEPFLSMMLQTFRASKLLELRQRTRI 1319

Query: 1274 FIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKSYIVMGKVVVAKNP 1095
            FIPKGR MMG LDETRTLEYG+VFVQ+SN RL  L           S++V GKVVVAKNP
Sbjct: 1320 FIPKGRTMMGVLDETRTLEYGEVFVQYSNKRLSGL-----------SHVVKGKVVVAKNP 1368

Query: 1094 CLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIPP 915
            CLHPGDVRVLKAV+VPAL HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIPP
Sbjct: 1369 CLHPGDVRVLKAVDVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPP 1428

Query: 914  RTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAEP 735
            RTIEPM+Y  A P VLDHDV IEEVEEYFTNYI+NDSLGIIANAH VFADK+P KAMAEP
Sbjct: 1429 RTIEPMEYDSAQPTVLDHDVEIEEVEEYFTNYILNDSLGIIANAHIVFADKEPGKAMAEP 1488

Query: 734  CIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQXX 555
            CIELAKLFS+AVDFPKTG+PAVIPPHL+ KEYPDFMEKPDK TY S NVIGKLFRE+Q  
Sbjct: 1489 CIELAKLFSVAVDFPKTGIPAVIPPHLFAKEYPDFMEKPDKTTYKSKNVIGKLFREIQGI 1548

Query: 554  XXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEAE 375
                      TLEVA +S+DPDME  GFMDY DDAFYHK+NYDYKLGNLMDYYGIKTE+E
Sbjct: 1549 STNDGSITSFTLEVAKESHDPDMEFVGFMDYADDAFYHKTNYDYKLGNLMDYYGIKTESE 1608

Query: 374  ILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXXXXXAWYH 195
            I+SGNIMKMSKSFTKRRDADAI MA++SLRKEAR+WFN                  AWY 
Sbjct: 1609 IISGNIMKMSKSFTKRRDADAIAMAIKSLRKEARSWFNEDNTGADSGSDCPYAKASAWYF 1668

Query: 194  VTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYTDLSLEHSFNHGLRIN 15
            VTYH SY+G YNEGM+RDH+LSFPWCVY  LVQIKKEK RMR  +   +E SF+  LR++
Sbjct: 1669 VTYHHSYYGLYNEGMQRDHFLSFPWCVYHLLVQIKKEKVRMRMLS--RMEQSFSRRLRLD 1726



 Score =  480 bits (1235), Expect = e-132
 Identities = 246/334 (73%), Positives = 273/334 (81%), Gaps = 9/334 (2%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VN+LVQH CLSG  LDNDFY LVDP +M  + +EHALE+MYYSKDFCY+P  WL DQY  
Sbjct: 291  VNALVQHGCLSGSELDNDFYRLVDPLKMTSDCVEHALEKMYYSKDFCYEPARWLKDQYKM 350

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            Y++S   P SPT+SLD GLVYVRRVQITP KVYFCGPEINVSNRVLR FH+HIDNFLRVS
Sbjct: 351  YIKSNYLPPSPTISLDDGLVYVRRVQITPSKVYFCGPEINVSNRVLRRFHKHIDNFLRVS 410

Query: 2168 FVDEELEKLYSTDLSSRTSE--KTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENSL 1995
            FVDE L+KLYS DLSS  SE  +T+IY RILSILR+GI IG KKFEFLAFSSSQLRENSL
Sbjct: 411  FVDEGLDKLYSADLSSHISESGRTKIYYRILSILRNGIDIGGKKFEFLAFSSSQLRENSL 470

Query: 1994 WMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDVN 1815
            WMF+PTTTG TA  IREWMGDF RI+NVAKYAARLGQSFGSSTETLSV+R+EIE I DV 
Sbjct: 471  WMFSPTTTGLTADSIREWMGDFSRIKNVAKYAARLGQSFGSSTETLSVSRNEIETISDVK 530

Query: 1814 VSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKLS 1635
            V HG  +YVFSDGIGKIS+E ARRVAKKCG++S PSAFQIRYGG+KGVVA+DPTSS KLS
Sbjct: 531  VKHGATKYVFSDGIGKISIELARRVAKKCGHDSMPSAFQIRYGGFKGVVAVDPTSSLKLS 590

Query: 1634 LRESMRKYDSVNTKLDVLACSKPQ-------PCY 1554
            LR+SM K  S  +K   L   K +       PCY
Sbjct: 591  LRKSMHKSISGKSKELALRMGKSKTIELSGFPCY 624


>gb|KOM46251.1| hypothetical protein LR48_Vigan06g155700 [Vigna angularis]
          Length = 1131

 Score = 1283 bits (3319), Expect = 0.0
 Identities = 640/829 (77%), Positives = 713/829 (86%), Gaps = 6/829 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VNSLVQHVCL+GP LD+DFY +VDPRR+ ++FIE+ALE+MYYSK+FCYDP  WL +QY R
Sbjct: 291  VNSLVQHVCLTGPALDDDFYRMVDPRRIPLDFIENALEKMYYSKEFCYDPTKWLTEQYKR 350

Query: 2348 YLQS--ENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLR 2175
            YLQS  +N PRSP +SLD GLVYVRRVQITPCKVYFCGPEINVSNRVLRHFH+H+DNF+R
Sbjct: 351  YLQSNSKNGPRSPAISLDAGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHEHLDNFIR 410

Query: 2174 VSFVDEELEKLYSTDLSSRT-SEKTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENS 1998
            VSFVDEEL+KL+STDLSSR  ++KT++Y RIL IL++GI+IG+KKFEFLAFSSSQLRENS
Sbjct: 411  VSFVDEELDKLFSTDLSSRAQNKKTDLYTRILDILKNGIIIGNKKFEFLAFSSSQLRENS 470

Query: 1997 LWMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDV 1818
            LWMFAPT TGCTA +IR+WMGDF +IRN+AKY+ARLGQSFGSSTETLSV R EI II DV
Sbjct: 471  LWMFAPTGTGCTAEYIRKWMGDFSQIRNIAKYSARLGQSFGSSTETLSVPRHEIGIIPDV 530

Query: 1817 NVSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKL 1638
              + GG EYVFSDGIGKISLEFA++VAKKCGY+ +PSAFQIRYGGYKGVVA+DPTS   L
Sbjct: 531  KRTSGGKEYVFSDGIGKISLEFAKKVAKKCGYDCTPSAFQIRYGGYKGVVAVDPTSHYNL 590

Query: 1637 SLRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNT 1458
            SLR SM+KYDS NTKLDVL  SK QPCYLNRQLITLLSTL ++D  FEKKQ+EAV+QLNT
Sbjct: 591  SLRNSMQKYDSDNTKLDVLGRSKFQPCYLNRQLITLLSTLGIRDDVFEKKQREAVDQLNT 650

Query: 1457 MLTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTR 1278
            +LTDSLKA E LDLMSSGEITN+LKEMLICGYKPN EPFLSMMLQ FRASKLL+LR K+R
Sbjct: 651  ILTDSLKAQEVLDLMSSGEITNVLKEMLICGYKPNEEPFLSMMLQIFRASKLLELRLKSR 710

Query: 1277 IFIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKSYIVMGKVVVAKN 1098
            IFIPKGRAMMGCLDET TLEYGQVFVQFS+NRL +LSDD  SY   KSY+V GKVVVAKN
Sbjct: 711  IFIPKGRAMMGCLDETCTLEYGQVFVQFSSNRLQNLSDDTDSYDLPKSYMVNGKVVVAKN 770

Query: 1097 PCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIP 918
            PCLHPGDVRVL+AV+VPAL+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP
Sbjct: 771  PCLHPGDVRVLQAVDVPALYHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVCWDPELIP 830

Query: 917  PRTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAE 738
             R I PMDYTP+P   L   V IE+++EYFTNYIVNDSLGIIANAHTV+AD++P KAM+E
Sbjct: 831  SRQIPPMDYTPSPTTELHRCVTIEDIQEYFTNYIVNDSLGIIANAHTVYADRQPGKAMSE 890

Query: 737  PCIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQ- 561
             C++LA LFS AVDFPKTGVPAVIP  LYVKEYPDFMEK DK TY+S NVIGKL+REV  
Sbjct: 891  ECLKLATLFSTAVDFPKTGVPAVIPRELYVKEYPDFMEKFDKVTYISPNVIGKLYREVMK 950

Query: 560  -XXXXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKT 384
                         TLEVA +SYD DMEVDGFMDYVDDAFY+K+NYDYKLGNLMDYYGIKT
Sbjct: 951  TISSSDGGSVSSFTLEVARRSYDADMEVDGFMDYVDDAFYYKTNYDYKLGNLMDYYGIKT 1010

Query: 383  EAEILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFN-XXXXXXXXXXXXXXXXXX 207
            EAEILSGNIMK+SKSF KRRDA++INMAVRSLRKEAR+WFN                   
Sbjct: 1011 EAEILSGNIMKLSKSFNKRRDAESINMAVRSLRKEARSWFNEGSNGVDSGSGDDAYAKAS 1070

Query: 206  AWYHVTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYT 60
            AWYHVTYHPSY G YNEGM+RDHYLSFPWCVY QL+QIKKEK   R Y+
Sbjct: 1071 AWYHVTYHPSYLGLYNEGMKRDHYLSFPWCVYPQLLQIKKEKVSNRMYS 1119


>ref|XP_014520607.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vigna radiata
            var. radiata]
          Length = 1130

 Score = 1279 bits (3310), Expect = 0.0
 Identities = 640/829 (77%), Positives = 708/829 (85%), Gaps = 6/829 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VNSLVQHVCL+GP LD DFY LVDPRR++++FIE+ALE+MYYSK+FCYDP  WL +QY R
Sbjct: 291  VNSLVQHVCLTGPALDGDFYRLVDPRRISLDFIENALEKMYYSKEFCYDPTKWLTEQYKR 350

Query: 2348 YLQS--ENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLR 2175
            YLQS  +N PRSP +SLD GLVYVRRVQITPCKVYFCGPE+NVSNRVLRHFH+H+DNF+R
Sbjct: 351  YLQSNSKNGPRSPAISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFHEHLDNFIR 410

Query: 2174 VSFVDEELEKLYSTDLSSRT-SEKTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENS 1998
            VSFVDEEL+KL+STDLSSR  ++KT +Y RIL IL++GIVIGDKKFEFLAFSSSQLRENS
Sbjct: 411  VSFVDEELDKLFSTDLSSRAQNKKTNLYTRILDILKNGIVIGDKKFEFLAFSSSQLRENS 470

Query: 1997 LWMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDV 1818
            LWMFAPT TGCTA +IR+WMGDF +IRN+AKY+ARLGQSFGSSTETLSV R EI II DV
Sbjct: 471  LWMFAPTGTGCTAEYIRKWMGDFSQIRNIAKYSARLGQSFGSSTETLSVPRHEIGIIPDV 530

Query: 1817 NVSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKL 1638
              +  G EYVFSDGIGKISLE A+RVAKKCGY+  PSAFQIRYGGYKGVVA+DPTS   L
Sbjct: 531  KRTSDGKEYVFSDGIGKISLELAKRVAKKCGYDCIPSAFQIRYGGYKGVVAVDPTSHFNL 590

Query: 1637 SLRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNT 1458
            SLR SM KY S NTKLDVL  SK QPCYLNRQLITLLSTL ++D  FEKKQ+EAV+QLNT
Sbjct: 591  SLRNSMLKYHSDNTKLDVLGRSKFQPCYLNRQLITLLSTLGIRDVVFEKKQREAVDQLNT 650

Query: 1457 MLTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTR 1278
            +LTDSLKA E LDLMSSGEITN+LKEMLICGYKPN EPFLSMMLQ FRASKLL+LR K+R
Sbjct: 651  ILTDSLKAQEVLDLMSSGEITNVLKEMLICGYKPNEEPFLSMMLQIFRASKLLELRLKSR 710

Query: 1277 IFIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKSYIVMGKVVVAKN 1098
            IFIPKGRAMMGCLDET TLEYGQVFVQFS+NRL +LSDD  SY   KSY++ GKVVVAKN
Sbjct: 711  IFIPKGRAMMGCLDETCTLEYGQVFVQFSSNRLQNLSDDTDSYDLPKSYMINGKVVVAKN 770

Query: 1097 PCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIP 918
            PCLHPGDVRVL+AV+VPAL+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP
Sbjct: 771  PCLHPGDVRVLQAVDVPALYHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVCWDPELIP 830

Query: 917  PRTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAE 738
             R I PMDYTP+P   L   V IE+V+EYFTNYIVND LGIIANAHTVFAD++P KAM+E
Sbjct: 831  SRQIPPMDYTPSPTTELHRGVTIEDVQEYFTNYIVNDCLGIIANAHTVFADREPGKAMSE 890

Query: 737  PCIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREV-- 564
             C++LA+LFS AVDFPKTGVPAVIP  LYVKEYPDFMEK DK TY+S NVIGKL+REV  
Sbjct: 891  ECLKLAELFSTAVDFPKTGVPAVIPRELYVKEYPDFMEKSDKVTYISTNVIGKLYREVIK 950

Query: 563  QXXXXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKT 384
                         TLEVA +SYD DMEVDGFMDYVDDAFY+K+NYDYKLGNLMDYYGIKT
Sbjct: 951  TISSSDGGSVSSFTLEVARRSYDADMEVDGFMDYVDDAFYYKTNYDYKLGNLMDYYGIKT 1010

Query: 383  EAEILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFN-XXXXXXXXXXXXXXXXXX 207
            EAEILSGNIMK+SKSF KRRDA++INMAVRSLRKEAR+WFN                   
Sbjct: 1011 EAEILSGNIMKLSKSFNKRRDAESINMAVRSLRKEARSWFNEGSNGVDSGSGDDAYAKAS 1070

Query: 206  AWYHVTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYT 60
            AWYHVTYHP+Y G YNEGM+RDHYLSFPWCVY QL+QIKKEK   RKY+
Sbjct: 1071 AWYHVTYHPNYLGSYNEGMKRDHYLSFPWCVYHQLLQIKKEKVSNRKYS 1119


>ref|XP_013466600.1| RNA-directed RNA polymerase [Medicago truncatula]
            gi|657401683|gb|KEH40642.1| RNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1117

 Score = 1278 bits (3306), Expect = 0.0
 Identities = 647/840 (77%), Positives = 711/840 (84%), Gaps = 2/840 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VNSLVQH CLSG  LDN FYHLVDP R+NVE IE+ALE+MYYS DFCY+P  WL DQY  
Sbjct: 294  VNSLVQHGCLSGSELDNAFYHLVDPTRVNVELIENALEKMYYSNDFCYEPVRWLKDQYKM 353

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            Y  S N PRSPT+SLD GLVYVRR QITPCKVYFCGPEINVSNRVLR + +H+DNFLRVS
Sbjct: 354  YHSSNNLPRSPTISLDNGLVYVRRAQITPCKVYFCGPEINVSNRVLRKYKKHMDNFLRVS 413

Query: 2168 FVDEELEKLYSTDLSSRTSE--KTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENSL 1995
            FVDEEL+KLYS+DLSSR S   +T+IY RILSILR+GIVIGDKKFEFLAFSSSQLRE+SL
Sbjct: 414  FVDEELDKLYSSDLSSRISVGGRTDIYYRILSILRNGIVIGDKKFEFLAFSSSQLRESSL 473

Query: 1994 WMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDVN 1815
            WMFA T TG TA  IREWMGDF RI+NVAKYAARLGQSFGSSTET +V+  EIEIILDV 
Sbjct: 474  WMFARTPTGDTAGSIREWMGDFSRIKNVAKYAARLGQSFGSSTETTTVSSTEIEIILDV- 532

Query: 1814 VSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKLS 1635
              H   +YVFSDGIGKISLE ARRVA+KCGY+S PSAFQIRYGGYKGVVA+DPTSS KLS
Sbjct: 533  --HNKTKYVFSDGIGKISLELARRVAQKCGYDSMPSAFQIRYGGYKGVVAVDPTSSVKLS 590

Query: 1634 LRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNTM 1455
            LR SM KYDS NT LDVLACSK +PCYLNRQLITLLSTL+V+DS FEKKQKEAV+QLNT+
Sbjct: 591  LRMSMLKYDSDNTDLDVLACSKFRPCYLNRQLITLLSTLDVEDSVFEKKQKEAVDQLNTI 650

Query: 1454 LTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTRI 1275
            LTDS KAHE LDLMSSGE+TNILKEMLICGYKPNVEPFLSMMLQTFRASKLL+LRQKTRI
Sbjct: 651  LTDSTKAHEVLDLMSSGEVTNILKEMLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRI 710

Query: 1274 FIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKSYIVMGKVVVAKNP 1095
            FIPKGRAMMG LDETRTLEYG+VFVQ+SNNR  SLS           ++V GKVVVAKNP
Sbjct: 711  FIPKGRAMMGVLDETRTLEYGEVFVQYSNNREDSLS-----------HVVNGKVVVAKNP 759

Query: 1094 CLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIPP 915
            CL+PGDVRVLKAV+VPAL HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIPP
Sbjct: 760  CLYPGDVRVLKAVDVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPP 819

Query: 914  RTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAEP 735
            +TI+PM+Y  A P+VLDHDV IEEV++YFT+YI+ND LGIIANAHTVFADK+P KAMA+P
Sbjct: 820  KTIDPMEYDSAKPIVLDHDVEIEEVQKYFTDYILNDCLGIIANAHTVFADKEPGKAMADP 879

Query: 734  CIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQXX 555
            C+ELAKLFS AVDFPKTG+PA IP  L+  EYPDFMEKPDKP Y S NVIGKLFRE+Q  
Sbjct: 880  CVELAKLFSTAVDFPKTGIPAEIPRGLFPTEYPDFMEKPDKPIYKSKNVIGKLFREIQGI 939

Query: 554  XXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEAE 375
                      TLEVA +SYD DME +GFMDYVDDAFYHK+NYDYKLGNLMDYYGIKTEAE
Sbjct: 940  STKDGSITSFTLEVAKESYDSDMEFEGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAE 999

Query: 374  ILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXXXXXAWYH 195
            ILSGNIMKMSKSFTK+RDADAI MAVRSLRKEAR+WF                   AWY+
Sbjct: 1000 ILSGNIMKMSKSFTKKRDADAITMAVRSLRKEARSWFTDSGAGVDSGSDDAYAKASAWYY 1059

Query: 194  VTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYTDLSLEHSFNHGLRIN 15
            VTYH SY+G YNEGM+RDH+LSFPWCVY  LVQIKKEKARM+ ++   +E SF+H LR++
Sbjct: 1060 VTYHHSYYGLYNEGMQRDHFLSFPWCVYHLLVQIKKEKARMKMHS--RMEQSFSHRLRLD 1117


>ref|XP_013466601.1| RNA-directed RNA polymerase [Medicago truncatula]
            gi|657401682|gb|KEH40641.1| RNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1054

 Score = 1278 bits (3306), Expect = 0.0
 Identities = 647/840 (77%), Positives = 711/840 (84%), Gaps = 2/840 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VNSLVQH CLSG  LDN FYHLVDP R+NVE IE+ALE+MYYS DFCY+P  WL DQY  
Sbjct: 231  VNSLVQHGCLSGSELDNAFYHLVDPTRVNVELIENALEKMYYSNDFCYEPVRWLKDQYKM 290

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            Y  S N PRSPT+SLD GLVYVRR QITPCKVYFCGPEINVSNRVLR + +H+DNFLRVS
Sbjct: 291  YHSSNNLPRSPTISLDNGLVYVRRAQITPCKVYFCGPEINVSNRVLRKYKKHMDNFLRVS 350

Query: 2168 FVDEELEKLYSTDLSSRTSE--KTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENSL 1995
            FVDEEL+KLYS+DLSSR S   +T+IY RILSILR+GIVIGDKKFEFLAFSSSQLRE+SL
Sbjct: 351  FVDEELDKLYSSDLSSRISVGGRTDIYYRILSILRNGIVIGDKKFEFLAFSSSQLRESSL 410

Query: 1994 WMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDVN 1815
            WMFA T TG TA  IREWMGDF RI+NVAKYAARLGQSFGSSTET +V+  EIEIILDV 
Sbjct: 411  WMFARTPTGDTAGSIREWMGDFSRIKNVAKYAARLGQSFGSSTETTTVSSTEIEIILDV- 469

Query: 1814 VSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKLS 1635
              H   +YVFSDGIGKISLE ARRVA+KCGY+S PSAFQIRYGGYKGVVA+DPTSS KLS
Sbjct: 470  --HNKTKYVFSDGIGKISLELARRVAQKCGYDSMPSAFQIRYGGYKGVVAVDPTSSVKLS 527

Query: 1634 LRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNTM 1455
            LR SM KYDS NT LDVLACSK +PCYLNRQLITLLSTL+V+DS FEKKQKEAV+QLNT+
Sbjct: 528  LRMSMLKYDSDNTDLDVLACSKFRPCYLNRQLITLLSTLDVEDSVFEKKQKEAVDQLNTI 587

Query: 1454 LTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTRI 1275
            LTDS KAHE LDLMSSGE+TNILKEMLICGYKPNVEPFLSMMLQTFRASKLL+LRQKTRI
Sbjct: 588  LTDSTKAHEVLDLMSSGEVTNILKEMLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRI 647

Query: 1274 FIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKSYIVMGKVVVAKNP 1095
            FIPKGRAMMG LDETRTLEYG+VFVQ+SNNR  SLS           ++V GKVVVAKNP
Sbjct: 648  FIPKGRAMMGVLDETRTLEYGEVFVQYSNNREDSLS-----------HVVNGKVVVAKNP 696

Query: 1094 CLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIPP 915
            CL+PGDVRVLKAV+VPAL HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIPP
Sbjct: 697  CLYPGDVRVLKAVDVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPP 756

Query: 914  RTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAEP 735
            +TI+PM+Y  A P+VLDHDV IEEV++YFT+YI+ND LGIIANAHTVFADK+P KAMA+P
Sbjct: 757  KTIDPMEYDSAKPIVLDHDVEIEEVQKYFTDYILNDCLGIIANAHTVFADKEPGKAMADP 816

Query: 734  CIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQXX 555
            C+ELAKLFS AVDFPKTG+PA IP  L+  EYPDFMEKPDKP Y S NVIGKLFRE+Q  
Sbjct: 817  CVELAKLFSTAVDFPKTGIPAEIPRGLFPTEYPDFMEKPDKPIYKSKNVIGKLFREIQGI 876

Query: 554  XXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEAE 375
                      TLEVA +SYD DME +GFMDYVDDAFYHK+NYDYKLGNLMDYYGIKTEAE
Sbjct: 877  STKDGSITSFTLEVAKESYDSDMEFEGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAE 936

Query: 374  ILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXXXXXAWYH 195
            ILSGNIMKMSKSFTK+RDADAI MAVRSLRKEAR+WF                   AWY+
Sbjct: 937  ILSGNIMKMSKSFTKKRDADAITMAVRSLRKEARSWFTDSGAGVDSGSDDAYAKASAWYY 996

Query: 194  VTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYTDLSLEHSFNHGLRIN 15
            VTYH SY+G YNEGM+RDH+LSFPWCVY  LVQIKKEKARM+ ++   +E SF+H LR++
Sbjct: 997  VTYHHSYYGLYNEGMQRDHFLSFPWCVYHLLVQIKKEKARMKMHS--RMEQSFSHRLRLD 1054


>ref|XP_014520611.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2 [Vigna
            radiata var. radiata]
          Length = 1082

 Score = 1226 bits (3172), Expect = 0.0
 Identities = 614/829 (74%), Positives = 695/829 (83%), Gaps = 6/829 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VNSLVQHVCL+G  L++DFYH VDP  M ++FI++ALE+MY+SK+FCYDP  W  DQY R
Sbjct: 256  VNSLVQHVCLAGRALNDDFYHWVDPSTMPLDFIKNALEKMYFSKEFCYDPTKWFTDQYKR 315

Query: 2348 YLQS--ENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLR 2175
            YL+S  +N PR P +SLD GLVYVRRVQITPCKVYFCGPE+NVSNRVLRHF++H+DNF+R
Sbjct: 316  YLKSNSKNCPRWPAMSLDKGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFYEHLDNFIR 375

Query: 2174 VSFVDEELEKLYSTDLSSRT-SEKTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENS 1998
            VSFVDEEL+KL+ST+LSSR  ++KT++Y+RIL IL++GIVIGDKKFEFLAFSSSQLRENS
Sbjct: 376  VSFVDEELDKLFSTELSSRAQNKKTDLYKRILDILKNGIVIGDKKFEFLAFSSSQLRENS 435

Query: 1997 LWMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDV 1818
            LWMFAPT    TAA IR WMG+F +IRNVAKYAARLGQSFGSSTETLSV R+EIEII DV
Sbjct: 436  LWMFAPTGK-YTAASIRSWMGNFSKIRNVAKYAARLGQSFGSSTETLSVPRNEIEIIPDV 494

Query: 1817 NVSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKL 1638
            + +  G EYVFSDGIGKISL+FAR+VAKKCGY+ +PSAFQIRYGGYKGVVA+DPTS  KL
Sbjct: 495  SRTSDGNEYVFSDGIGKISLKFARKVAKKCGYHGTPSAFQIRYGGYKGVVAVDPTSRFKL 554

Query: 1637 SLRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNT 1458
            SLR SMRKYDS NTKLDVL  SK QPCYLNRQLITLLSTL + D  FEKKQ+EA+ QLNT
Sbjct: 555  SLRNSMRKYDSDNTKLDVLGRSKFQPCYLNRQLITLLSTLGINDGVFEKKQREAMYQLNT 614

Query: 1457 MLTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTR 1278
            +L DSLKA E LDLM +GEITN+LK++LICGY+P+ EPFLSMMLQ FRASKL +LR K+R
Sbjct: 615  ILKDSLKAQEVLDLMPAGEITNVLKKLLICGYQPSEEPFLSMMLQIFRASKLSELRHKSR 674

Query: 1277 IFIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKSYIVMGKVVVAKN 1098
            IFIPKGRAMMGCLDET TLEYGQVFVQ SNN+L  LS D   Y   K Y V GKVVV KN
Sbjct: 675  IFIPKGRAMMGCLDETSTLEYGQVFVQISNNKLRDLSYDSLPYNLEKKYPVTGKVVVTKN 734

Query: 1097 PCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIP 918
            PCLHPGDVRVL+AV+VP LHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP
Sbjct: 735  PCLHPGDVRVLEAVDVPDLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIP 794

Query: 917  PRTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAE 738
             R  EPMDYTP+  + LDHDV I EVEEYFTNY+VNDSLGIIANAHTVFAD++P+KAM+ 
Sbjct: 795  SRQTEPMDYTPSSTVELDHDVTIVEVEEYFTNYMVNDSLGIIANAHTVFADRQPKKAMSA 854

Query: 737  PCIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQX 558
             C++LAKLFS AVDFPKTGVPAVIP  LYVKEYPDFMEK ++ TY+S N+IGKL+REV  
Sbjct: 855  ECLKLAKLFSTAVDFPKTGVPAVIPRELYVKEYPDFMEKSNRETYISPNIIGKLYREVME 914

Query: 557  XXXXXXXXXXXTL--EVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKT 384
                       +   EVA +SYD +MEVDGFMDYVDDAFYHK+NYDYKLGNLMDYYGIKT
Sbjct: 915  TISSSDGGYVSSFTQEVARRSYDFNMEVDGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKT 974

Query: 383  EAEILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFN-XXXXXXXXXXXXXXXXXX 207
            EAEILSGNI+KMSKSF KRRDA+AIN A+ SLRK+AR+WFN                   
Sbjct: 975  EAEILSGNIIKMSKSFNKRRDAEAINQAITSLRKDARSWFNESSNGVDSRNGDDKYAKAS 1034

Query: 206  AWYHVTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYT 60
            AWYHVTYHPSYWG YN+GM RDHYLSFPWCV+ QL+QIKK K   R+Y+
Sbjct: 1035 AWYHVTYHPSYWGHYNQGMGRDHYLSFPWCVFPQLLQIKK-KVSNRRYS 1082


>ref|XP_014520609.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1 [Vigna
            radiata var. radiata] gi|951052136|ref|XP_014520610.1|
            PREDICTED: probable RNA-dependent RNA polymerase 1
            isoform X1 [Vigna radiata var. radiata]
          Length = 1116

 Score = 1226 bits (3172), Expect = 0.0
 Identities = 614/829 (74%), Positives = 695/829 (83%), Gaps = 6/829 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VNSLVQHVCL+G  L++DFYH VDP  M ++FI++ALE+MY+SK+FCYDP  W  DQY R
Sbjct: 290  VNSLVQHVCLAGRALNDDFYHWVDPSTMPLDFIKNALEKMYFSKEFCYDPTKWFTDQYKR 349

Query: 2348 YLQS--ENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLR 2175
            YL+S  +N PR P +SLD GLVYVRRVQITPCKVYFCGPE+NVSNRVLRHF++H+DNF+R
Sbjct: 350  YLKSNSKNCPRWPAMSLDKGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFYEHLDNFIR 409

Query: 2174 VSFVDEELEKLYSTDLSSRT-SEKTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENS 1998
            VSFVDEEL+KL+ST+LSSR  ++KT++Y+RIL IL++GIVIGDKKFEFLAFSSSQLRENS
Sbjct: 410  VSFVDEELDKLFSTELSSRAQNKKTDLYKRILDILKNGIVIGDKKFEFLAFSSSQLRENS 469

Query: 1997 LWMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDV 1818
            LWMFAPT    TAA IR WMG+F +IRNVAKYAARLGQSFGSSTETLSV R+EIEII DV
Sbjct: 470  LWMFAPTGK-YTAASIRSWMGNFSKIRNVAKYAARLGQSFGSSTETLSVPRNEIEIIPDV 528

Query: 1817 NVSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKL 1638
            + +  G EYVFSDGIGKISL+FAR+VAKKCGY+ +PSAFQIRYGGYKGVVA+DPTS  KL
Sbjct: 529  SRTSDGNEYVFSDGIGKISLKFARKVAKKCGYHGTPSAFQIRYGGYKGVVAVDPTSRFKL 588

Query: 1637 SLRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNT 1458
            SLR SMRKYDS NTKLDVL  SK QPCYLNRQLITLLSTL + D  FEKKQ+EA+ QLNT
Sbjct: 589  SLRNSMRKYDSDNTKLDVLGRSKFQPCYLNRQLITLLSTLGINDGVFEKKQREAMYQLNT 648

Query: 1457 MLTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTR 1278
            +L DSLKA E LDLM +GEITN+LK++LICGY+P+ EPFLSMMLQ FRASKL +LR K+R
Sbjct: 649  ILKDSLKAQEVLDLMPAGEITNVLKKLLICGYQPSEEPFLSMMLQIFRASKLSELRHKSR 708

Query: 1277 IFIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKSYIVMGKVVVAKN 1098
            IFIPKGRAMMGCLDET TLEYGQVFVQ SNN+L  LS D   Y   K Y V GKVVV KN
Sbjct: 709  IFIPKGRAMMGCLDETSTLEYGQVFVQISNNKLRDLSYDSLPYNLEKKYPVTGKVVVTKN 768

Query: 1097 PCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIP 918
            PCLHPGDVRVL+AV+VP LHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP
Sbjct: 769  PCLHPGDVRVLEAVDVPDLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIP 828

Query: 917  PRTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAE 738
             R  EPMDYTP+  + LDHDV I EVEEYFTNY+VNDSLGIIANAHTVFAD++P+KAM+ 
Sbjct: 829  SRQTEPMDYTPSSTVELDHDVTIVEVEEYFTNYMVNDSLGIIANAHTVFADRQPKKAMSA 888

Query: 737  PCIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQX 558
             C++LAKLFS AVDFPKTGVPAVIP  LYVKEYPDFMEK ++ TY+S N+IGKL+REV  
Sbjct: 889  ECLKLAKLFSTAVDFPKTGVPAVIPRELYVKEYPDFMEKSNRETYISPNIIGKLYREVME 948

Query: 557  XXXXXXXXXXXTL--EVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKT 384
                       +   EVA +SYD +MEVDGFMDYVDDAFYHK+NYDYKLGNLMDYYGIKT
Sbjct: 949  TISSSDGGYVSSFTQEVARRSYDFNMEVDGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKT 1008

Query: 383  EAEILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFN-XXXXXXXXXXXXXXXXXX 207
            EAEILSGNI+KMSKSF KRRDA+AIN A+ SLRK+AR+WFN                   
Sbjct: 1009 EAEILSGNIIKMSKSFNKRRDAEAINQAITSLRKDARSWFNESSNGVDSRNGDDKYAKAS 1068

Query: 206  AWYHVTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYT 60
            AWYHVTYHPSYWG YN+GM RDHYLSFPWCV+ QL+QIKK K   R+Y+
Sbjct: 1069 AWYHVTYHPSYWGHYNQGMGRDHYLSFPWCVFPQLLQIKK-KVSNRRYS 1116


>gb|KOM46252.1| hypothetical protein LR48_Vigan06g155800 [Vigna angularis]
          Length = 1116

 Score = 1224 bits (3166), Expect = 0.0
 Identities = 614/829 (74%), Positives = 693/829 (83%), Gaps = 6/829 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VNSLVQHVCL+G  L++DFYH VDPR M ++FI++ALE+MYYSK+FCYDP  W  DQY R
Sbjct: 290  VNSLVQHVCLAGRALNDDFYHWVDPRTMPLDFIKNALEKMYYSKEFCYDPTKWFTDQYKR 349

Query: 2348 YLQS--ENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLR 2175
            YL+S  +N PR P +SLD GLVYVRRVQITPCKVYFCGPE+NVSNRVLRHFH+H+DNF+R
Sbjct: 350  YLKSNSKNCPRWPAMSLDKGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFHEHLDNFIR 409

Query: 2174 VSFVDEELEKLYSTDLSSRT-SEKTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENS 1998
            VSFVDEEL+KL+ST+LSSR  ++KT++Y RIL IL++GIVIGDKKFEFLAFSSSQLRENS
Sbjct: 410  VSFVDEELDKLFSTELSSRAQNKKTDLYTRILDILKNGIVIGDKKFEFLAFSSSQLRENS 469

Query: 1997 LWMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDV 1818
            LWMFAPT    TAA IR WMG+F +IRNVAKYAARLGQSFGSSTETLSV R+EIEII DV
Sbjct: 470  LWMFAPTGK-YTAASIRSWMGNFSKIRNVAKYAARLGQSFGSSTETLSVPRNEIEIIPDV 528

Query: 1817 NVSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSPSAFQIRYGGYKGVVAIDPTSSAKL 1638
            + +  G EYVFSDGIGKISL+FAR VA+KCGY+ +PSAFQIRYGGYKGVVA+DPTS  KL
Sbjct: 529  SRTSDGNEYVFSDGIGKISLKFARSVARKCGYHGTPSAFQIRYGGYKGVVAVDPTSRFKL 588

Query: 1637 SLRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNT 1458
            SLR SMRKYDS NTKLDVL  SK QPCYLNRQLITLLSTL + D  FEKKQ+EA+ QL+T
Sbjct: 589  SLRNSMRKYDSDNTKLDVLGRSKFQPCYLNRQLITLLSTLGINDGVFEKKQREAMYQLDT 648

Query: 1457 MLTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTR 1278
            +L DSLKA E LDLM +GEITN+LK++LICGYKP+ EPFLSMMLQ FRASKL DLR K++
Sbjct: 649  ILKDSLKAQEVLDLMPAGEITNVLKKLLICGYKPSEEPFLSMMLQIFRASKLSDLRLKSK 708

Query: 1277 IFIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKSYIVMGKVVVAKN 1098
            IFIPKGRAMMGCLDET TLEYGQVFVQ SNN L   SDD   Y   K Y + GKVVV KN
Sbjct: 709  IFIPKGRAMMGCLDETSTLEYGQVFVQISNNGLRDRSDDSLPYNLPKKYPITGKVVVTKN 768

Query: 1097 PCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIP 918
            PCLHPGDVRVL+AV+VP LHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP
Sbjct: 769  PCLHPGDVRVLEAVDVPDLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIP 828

Query: 917  PRTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAE 738
             R  EPMDYTP   + LDHDV I EVEEYFTNY+VNDSLGIIANAHTVFAD++PEKAM+ 
Sbjct: 829  FRQTEPMDYTPFSTVELDHDVTIAEVEEYFTNYMVNDSLGIIANAHTVFADRQPEKAMSA 888

Query: 737  PCIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQX 558
             C++LAKLFS AVDFPKTGVPAVIP  LYVKEYPDFMEK ++ TY+S N+IGKL+REV  
Sbjct: 889  ECLKLAKLFSTAVDFPKTGVPAVIPRALYVKEYPDFMEKSNRETYISPNIIGKLYREVME 948

Query: 557  XXXXXXXXXXXTL--EVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKT 384
                       +   EVA +SYD +MEVDGFMDYVDDAFY+K+NYDYKLGNLMDYYGIKT
Sbjct: 949  TISSSDGGYVSSFTQEVARRSYDFNMEVDGFMDYVDDAFYYKTNYDYKLGNLMDYYGIKT 1008

Query: 383  EAEILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFN-XXXXXXXXXXXXXXXXXX 207
            EAEILSGNI+K+SKSF KRRDA+A+N A+ SLRK+AR+WFN                   
Sbjct: 1009 EAEILSGNIIKLSKSFNKRRDAEAVNQAMTSLRKDARSWFNEGRNGVDSRNGDDKYAKAS 1068

Query: 206  AWYHVTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYT 60
            AWYHVTYHPSYWGRYN+GM RDHYLSFPWCV+ QL+QIKK K   R+Y+
Sbjct: 1069 AWYHVTYHPSYWGRYNQGMGRDHYLSFPWCVFPQLLQIKK-KVSNRRYS 1116


>ref|XP_011463162.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2
            [Fragaria vesca subsp. vesca]
          Length = 1089

 Score = 1211 bits (3134), Expect = 0.0
 Identities = 607/841 (72%), Positives = 690/841 (82%), Gaps = 3/841 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            +N LVQ  CLSGP LDN+FY LVDPRR++   IE AL+++   K+ CY+P  WL ++Y +
Sbjct: 251  INLLVQQGCLSGPTLDNNFYRLVDPRRISRPCIEFALDKLSNLKESCYEPAVWLNEEYRK 310

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            Y+ S+ PP+   +SLD+GLVYVRRVQITP KVYF GPE+NVSNR+LR +   IDNFLRVS
Sbjct: 311  YMMSKKPPKPALISLDSGLVYVRRVQITPSKVYFSGPEVNVSNRILRQYSSDIDNFLRVS 370

Query: 2168 FVDEELEKLYSTDLSSRTS-EKTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENSLW 1992
            FVDEE+EKLYSTDLS RTS  KT IY R+LS+LR GIV+G KKFEFLAFSSSQLRENSLW
Sbjct: 371  FVDEEMEKLYSTDLSPRTSTRKTRIYNRVLSVLRDGIVVGKKKFEFLAFSSSQLRENSLW 430

Query: 1991 MFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDVNV 1812
            MFAPT    +A  IR  MGDF +IRNVAKYAARLGQSFGSSTETLSV R+E+E+I DV V
Sbjct: 431  MFAPTDED-SADTIRAGMGDFRQIRNVAKYAARLGQSFGSSTETLSVGRNEMEVIPDVTV 489

Query: 1811 SHGGIEYVFSDGIGKISLEFARRVAKKCGYNS-SPSAFQIRYGGYKGVVAIDPTSSAKLS 1635
            +  GI+YVFSDGIGKIS +FA RVAKKCGY + +PSAFQIRYGGYKGVVA+DPTSS KLS
Sbjct: 490  NSCGIKYVFSDGIGKISADFAERVAKKCGYKAFTPSAFQIRYGGYKGVVAVDPTSSMKLS 549

Query: 1634 LRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNTM 1455
            LR+SM KY+S NTKLDVLACSK QPC+LNRQLITLLSTL V+D  F KKQ+ AV QLN +
Sbjct: 550  LRKSMSKYESENTKLDVLACSKYQPCFLNRQLITLLSTLEVQDHVFLKKQRAAVQQLNAI 609

Query: 1454 LTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTRI 1275
            LTD LKA EALDLMS+GE TN+LKE+L+CGYKPNVEPFLSMMLQTFRASKLL+LR KTRI
Sbjct: 610  LTDPLKAEEALDLMSAGESTNVLKELLMCGYKPNVEPFLSMMLQTFRASKLLELRTKTRI 669

Query: 1274 FIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKS-YIVMGKVVVAKN 1098
            FIP GRAMMGCLDETRTLEYGQVFVQFS  R   L DD+  + S  S +I+ GKVVVAKN
Sbjct: 670  FIPDGRAMMGCLDETRTLEYGQVFVQFSGKRRRQLFDDICIHSSLDSCFIIEGKVVVAKN 729

Query: 1097 PCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIP 918
            PCLHPGDVRVL+AVNVP LHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP
Sbjct: 730  PCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDPELIP 789

Query: 917  PRTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAE 738
            P+ I+PMDYTPAPP+ +D DV IEEVEEYF NYIVNDSLGIIANAHTVFAD K +KAM+ 
Sbjct: 790  PKQIQPMDYTPAPPIEMDQDVTIEEVEEYFVNYIVNDSLGIIANAHTVFADSKLDKAMSH 849

Query: 737  PCIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQX 558
            PC++LAKLFSIAVDFPKTGVPA IPP LY KEYPDFMEKPDK TY+S+NVIG+LFREV+ 
Sbjct: 850  PCLQLAKLFSIAVDFPKTGVPAEIPPELYAKEYPDFMEKPDKRTYISHNVIGQLFREVKD 909

Query: 557  XXXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEA 378
                       T +VA + YDPDMEVDGF DY++DAFYHK NYDYKLGN++DYYGIKTEA
Sbjct: 910  IAPHDSSIASFTRQVATKCYDPDMEVDGFEDYLEDAFYHKGNYDYKLGNMLDYYGIKTEA 969

Query: 377  EILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXXXXXAWY 198
            EILSG+IM +SKSFTKRRDADAIN+AV+SLRKEAR WFN                  AWY
Sbjct: 970  EILSGSIMTLSKSFTKRRDADAINVAVKSLRKEARAWFNEKDTGIDSGDDDVYAKASAWY 1029

Query: 197  HVTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYTDLSLEHSFNHGLRI 18
            HVTYHP+Y+G YNEGM R H++SFPWCV+ +L  IKKEK    +    SLE+   +GLR 
Sbjct: 1030 HVTYHPNYFGLYNEGMNRAHFISFPWCVFDKLGHIKKEKVNQARLIS-SLENRLRYGLRF 1088

Query: 17   N 15
            +
Sbjct: 1089 S 1089


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1 isoform X1 [Fragaria vesca
            subsp. vesca]
          Length = 1119

 Score = 1211 bits (3134), Expect = 0.0
 Identities = 607/841 (72%), Positives = 690/841 (82%), Gaps = 3/841 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            +N LVQ  CLSGP LDN+FY LVDPRR++   IE AL+++   K+ CY+P  WL ++Y +
Sbjct: 281  INLLVQQGCLSGPTLDNNFYRLVDPRRISRPCIEFALDKLSNLKESCYEPAVWLNEEYRK 340

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            Y+ S+ PP+   +SLD+GLVYVRRVQITP KVYF GPE+NVSNR+LR +   IDNFLRVS
Sbjct: 341  YMMSKKPPKPALISLDSGLVYVRRVQITPSKVYFSGPEVNVSNRILRQYSSDIDNFLRVS 400

Query: 2168 FVDEELEKLYSTDLSSRTS-EKTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENSLW 1992
            FVDEE+EKLYSTDLS RTS  KT IY R+LS+LR GIV+G KKFEFLAFSSSQLRENSLW
Sbjct: 401  FVDEEMEKLYSTDLSPRTSTRKTRIYNRVLSVLRDGIVVGKKKFEFLAFSSSQLRENSLW 460

Query: 1991 MFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDVNV 1812
            MFAPT    +A  IR  MGDF +IRNVAKYAARLGQSFGSSTETLSV R+E+E+I DV V
Sbjct: 461  MFAPTDED-SADTIRAGMGDFRQIRNVAKYAARLGQSFGSSTETLSVGRNEMEVIPDVTV 519

Query: 1811 SHGGIEYVFSDGIGKISLEFARRVAKKCGYNS-SPSAFQIRYGGYKGVVAIDPTSSAKLS 1635
            +  GI+YVFSDGIGKIS +FA RVAKKCGY + +PSAFQIRYGGYKGVVA+DPTSS KLS
Sbjct: 520  NSCGIKYVFSDGIGKISADFAERVAKKCGYKAFTPSAFQIRYGGYKGVVAVDPTSSMKLS 579

Query: 1634 LRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNTM 1455
            LR+SM KY+S NTKLDVLACSK QPC+LNRQLITLLSTL V+D  F KKQ+ AV QLN +
Sbjct: 580  LRKSMSKYESENTKLDVLACSKYQPCFLNRQLITLLSTLEVQDHVFLKKQRAAVQQLNAI 639

Query: 1454 LTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTRI 1275
            LTD LKA EALDLMS+GE TN+LKE+L+CGYKPNVEPFLSMMLQTFRASKLL+LR KTRI
Sbjct: 640  LTDPLKAEEALDLMSAGESTNVLKELLMCGYKPNVEPFLSMMLQTFRASKLLELRTKTRI 699

Query: 1274 FIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKS-YIVMGKVVVAKN 1098
            FIP GRAMMGCLDETRTLEYGQVFVQFS  R   L DD+  + S  S +I+ GKVVVAKN
Sbjct: 700  FIPDGRAMMGCLDETRTLEYGQVFVQFSGKRRRQLFDDICIHSSLDSCFIIEGKVVVAKN 759

Query: 1097 PCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIP 918
            PCLHPGDVRVL+AVNVP LHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP
Sbjct: 760  PCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDPELIP 819

Query: 917  PRTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAE 738
            P+ I+PMDYTPAPP+ +D DV IEEVEEYF NYIVNDSLGIIANAHTVFAD K +KAM+ 
Sbjct: 820  PKQIQPMDYTPAPPIEMDQDVTIEEVEEYFVNYIVNDSLGIIANAHTVFADSKLDKAMSH 879

Query: 737  PCIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQX 558
            PC++LAKLFSIAVDFPKTGVPA IPP LY KEYPDFMEKPDK TY+S+NVIG+LFREV+ 
Sbjct: 880  PCLQLAKLFSIAVDFPKTGVPAEIPPELYAKEYPDFMEKPDKRTYISHNVIGQLFREVKD 939

Query: 557  XXXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEA 378
                       T +VA + YDPDMEVDGF DY++DAFYHK NYDYKLGN++DYYGIKTEA
Sbjct: 940  IAPHDSSIASFTRQVATKCYDPDMEVDGFEDYLEDAFYHKGNYDYKLGNMLDYYGIKTEA 999

Query: 377  EILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXXXXXAWY 198
            EILSG+IM +SKSFTKRRDADAIN+AV+SLRKEAR WFN                  AWY
Sbjct: 1000 EILSGSIMTLSKSFTKRRDADAINVAVKSLRKEARAWFNEKDTGIDSGDDDVYAKASAWY 1059

Query: 197  HVTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYTDLSLEHSFNHGLRI 18
            HVTYHP+Y+G YNEGM R H++SFPWCV+ +L  IKKEK    +    SLE+   +GLR 
Sbjct: 1060 HVTYHPNYFGLYNEGMNRAHFISFPWCVFDKLGHIKKEKVNQARLIS-SLENRLRYGLRF 1118

Query: 17   N 15
            +
Sbjct: 1119 S 1119


>ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
            euphratica]
          Length = 1132

 Score = 1200 bits (3104), Expect = 0.0
 Identities = 606/848 (71%), Positives = 688/848 (81%), Gaps = 10/848 (1%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VN LVQ+ CL+G  LD+ FY LVDP RM V  IEHALE++Y+ K+ CY+P  W  +QY +
Sbjct: 286  VNLLVQNGCLAGSMLDDIFYRLVDPNRMPVRCIEHALEKLYHLKECCYEPSKWFNEQYRK 345

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            YL S NPPRSP LSLD GLVYV +VQITPCKV+FCGPE+N+SNRVLR + + IDNFLRVS
Sbjct: 346  YLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLEEIDNFLRVS 405

Query: 2168 FVDEELEKLYSTDLSSRTSEKTE-----IYERILSILRSGIVIGDKKFEFLAFSSSQLRE 2004
            FVDEELEK++STD+S RTS + E     IY RILS LR+GIVIGDKKFEFLAFSSSQLRE
Sbjct: 406  FVDEELEKIHSTDVSPRTSSRNELRRTAIYNRILSTLRNGIVIGDKKFEFLAFSSSQLRE 465

Query: 2003 NSLWMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIIL 1824
            NS WMFA +  G TAA IR WMG F +IRNVA+YAARLGQSF SSTETLSV+R EIEII 
Sbjct: 466  NSCWMFA-SRLGLTAADIRRWMGSFHQIRNVARYAARLGQSFSSSTETLSVSRHEIEIIS 524

Query: 1823 DVNVSHGGIEYVFSDGIGKISLEFARRVAKKCGYNS-SPSAFQIRYGGYKGVVAIDPTSS 1647
            D+ VS GG  Y+FSDGIGKIS EFAR+VA KCG    +PSAFQIRY GYKGVVA+DPTS+
Sbjct: 525  DIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTST 584

Query: 1646 AKLSLRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQ 1467
             KLSLR SM KY+S NTKLDVLA SK QPC+LNRQLITLLSTL V D  FE+KQ+EAV+Q
Sbjct: 585  KKLSLRMSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQ 644

Query: 1466 LNTMLTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQ 1287
            L+ +LTD L+A EAL LMS GE TNILKEML+CGY+P+ EPFLSMMLQTFRASKLL+LR 
Sbjct: 645  LDAILTDPLRAQEALVLMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRT 704

Query: 1286 KTRIFIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSL---SDDVSSYGSAKSYIVMGK 1116
            KTRIFIP GR MMGCLDETRTLE+GQVFVQFS +R  +L   SD  S  G  + Y++ G 
Sbjct: 705  KTRIFIPNGRLMMGCLDETRTLEHGQVFVQFSGSRFRNLYDSSDVFSERGRGQCYLIEGS 764

Query: 1115 VVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCW 936
            VVVAKNPCLHPGDVR+LKAV+VPALHHMVDCVVFPQKG RPHPN+CSGSDLDGDIYFVCW
Sbjct: 765  VVVAKNPCLHPGDVRILKAVDVPALHHMVDCVVFPQKGPRPHPNQCSGSDLDGDIYFVCW 824

Query: 935  DPELIPPRTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKP 756
            DPELIP + I PMDYTP P + LDHDV IEEVEEYFTNYIVNDSLGIIANAHT FADK+ 
Sbjct: 825  DPELIPSQQISPMDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKES 884

Query: 755  EKAMAEPCIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKL 576
             KAM+EPC+ELA+ FSIAVDFPKTGVPA IP +L V+EYPDFMEKPDKP+Y S NVIGKL
Sbjct: 885  LKAMSEPCLELARKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSYESRNVIGKL 944

Query: 575  FREVQXXXXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYY 396
            FREV+            T +VA Q YDPDMEVDGF DY+DDAFY+KSNYDYKLGNLM+YY
Sbjct: 945  FREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYY 1004

Query: 395  GIKTEAEILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXX 216
            GIKTEAE+LSG+ MKMSKSFTK+RDA+AI MAVRSLRKEAR+WFN               
Sbjct: 1005 GIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGLDSQADDVDA 1064

Query: 215  XXXAWYHVTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYTDL-SLEHS 39
               AWYHVTYH +YWG YNEGM RDH+LSFPWC+Y +L+QIKK  AR+R+   L S+E  
Sbjct: 1065 KASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCLYDKLIQIKKNSARIRRSRILHSVERQ 1124

Query: 38   FNHGLRIN 15
            F+ GL ++
Sbjct: 1125 FSRGLHLS 1132


>ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Populus
            euphratica]
          Length = 1132

 Score = 1199 bits (3101), Expect = 0.0
 Identities = 606/848 (71%), Positives = 687/848 (81%), Gaps = 10/848 (1%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VN LVQ+ CL+G  LD+ FY LVDP RM V  IEHALE++Y+ K+ CY+P  W  +QY +
Sbjct: 286  VNLLVQNGCLAGSMLDDIFYRLVDPNRMPVRCIEHALEKLYHLKECCYEPSKWFNEQYRK 345

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            YL S NPPRSP LSLD GLVYV +VQITPCKV+FCGPE+N+SNRVLR + + IDNFLRVS
Sbjct: 346  YLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLEEIDNFLRVS 405

Query: 2168 FVDEELEKLYSTDLSSRTSEKTE-----IYERILSILRSGIVIGDKKFEFLAFSSSQLRE 2004
            FVDEELEK++STD+S RTS + E     IY RILS LR+GIVIGDKKFEFLAFSSSQLRE
Sbjct: 406  FVDEELEKIHSTDVSPRTSSRNELRRTAIYNRILSTLRNGIVIGDKKFEFLAFSSSQLRE 465

Query: 2003 NSLWMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIIL 1824
            NS WMFA +  G TAA IR WMG F +IRNVA+YAARLGQSF SSTETLSV+R EIEII 
Sbjct: 466  NSCWMFA-SRLGLTAADIRRWMGSFHQIRNVARYAARLGQSFSSSTETLSVSRHEIEIIS 524

Query: 1823 DVNVSHGGIEYVFSDGIGKISLEFARRVAKKCGYNS-SPSAFQIRYGGYKGVVAIDPTSS 1647
            D+ VS GG  Y+FSDGIGKIS EFAR+VA KCG    +PSAFQIRY GYKGVVA+DPTS+
Sbjct: 525  DIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTST 584

Query: 1646 AKLSLRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQ 1467
             KLSLR SM KY+S NTKLDVLA SK QPC+LNRQLITLLSTL V D  FE+KQ+EAV+Q
Sbjct: 585  KKLSLRMSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQ 644

Query: 1466 LNTMLTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQ 1287
            L+ +LTD L+A EAL LMS GE TNILKEML+CGY+P+ EPFLSMMLQTFRASKLL+LR 
Sbjct: 645  LDAILTDPLRAQEALVLMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRT 704

Query: 1286 KTRIFIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSL---SDDVSSYGSAKSYIVMGK 1116
            KTRIFIP GR MMGCLDETRTLE+GQVFVQFS +R  +L   SD  S  G  + Y++ G 
Sbjct: 705  KTRIFIPNGRLMMGCLDETRTLEHGQVFVQFSGSRFRNLYDSSDVFSERGRGQCYLIEGS 764

Query: 1115 VVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCW 936
            VVVAKNPCLHPGDVR+LKAV+VPALHHMVDCVVFPQKG RPHP ECSGSDLDGDIYFVCW
Sbjct: 765  VVVAKNPCLHPGDVRILKAVDVPALHHMVDCVVFPQKGPRPHPKECSGSDLDGDIYFVCW 824

Query: 935  DPELIPPRTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKP 756
            DPELIP + I PMDYTP P + LDHDV IEEVEEYFTNYIVNDSLGIIANAHT FADK+ 
Sbjct: 825  DPELIPSQQISPMDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKES 884

Query: 755  EKAMAEPCIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKL 576
             KAM+EPC+ELA+ FSIAVDFPKTGVPA IP +L V+EYPDFMEKPDKP+Y S NVIGKL
Sbjct: 885  LKAMSEPCLELARKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSYESRNVIGKL 944

Query: 575  FREVQXXXXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYY 396
            FREV+            T +VA Q YDPDMEVDGF DY+DDAFY+KSNYDYKLGNLM+YY
Sbjct: 945  FREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYY 1004

Query: 395  GIKTEAEILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXX 216
            GIKTEAE+LSG+ MKMSKSFTK+RDA+AI MAVRSLRKEAR+WFN               
Sbjct: 1005 GIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGLDSQADDVDA 1064

Query: 215  XXXAWYHVTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYTDL-SLEHS 39
               AWYHVTYH +YWG YNEGM RDH+LSFPWC+Y +L+QIKK  AR+R+   L S+E  
Sbjct: 1065 KASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCLYDKLIQIKKNSARIRRSRILHSVERQ 1124

Query: 38   FNHGLRIN 15
            F+ GL ++
Sbjct: 1125 FSRGLHLS 1132


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score = 1195 bits (3091), Expect = 0.0
 Identities = 603/849 (71%), Positives = 689/849 (81%), Gaps = 11/849 (1%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VN LVQ+ CL+G  LD+ FY LVDP RM V  IE+ALE++Y+ K+ CY+P  W  +QY +
Sbjct: 286  VNLLVQNGCLAGSMLDDIFYRLVDPNRMPVRCIEYALEKLYHLKECCYEPSKWFNEQYKK 345

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            YL S NPPRSP LSLD GLVYV +VQITPCKV+FCGPE+NVSNRVLR + + IDNFLRVS
Sbjct: 346  YLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVS 405

Query: 2168 FVDEELEKLYSTDLSSRTSEKTE-----IYERILSILRSGIVIGDKKFEFLAFSSSQLRE 2004
            FVDEELEK++STD+S RTS + E     IY RILS L++GIVIGDKKFEFLAFSSSQLRE
Sbjct: 406  FVDEELEKIHSTDVSPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRE 465

Query: 2003 NSLWMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIIL 1824
            NS WMFA +  G TAA IR WMG F +IRNVA+YAARLGQSFGSSTETLSV+  EIEII 
Sbjct: 466  NSCWMFA-SRLGLTAADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEIIP 524

Query: 1823 DVNVSHGGIEYVFSDGIGKISLEFARRVAKKCGYNS-SPSAFQIRYGGYKGVVAIDPTSS 1647
            D+ VS GG  Y+FSDGIGKIS EFAR+VA KCG    +PSAFQIRY GYKGVVA+DPTSS
Sbjct: 525  DIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSS 584

Query: 1646 AKLSLRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQ 1467
             KLSLR SM KY+S NTKLDVLA SK QPC+LNRQLITLLSTL V D  FE+KQ+EAV+Q
Sbjct: 585  KKLSLRRSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQ 644

Query: 1466 LNTMLTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQ 1287
            L+ MLTD L+A EAL+LMS GE TNILKEML+CGY+P+ EPFLSMMLQTFRASKLL+LR 
Sbjct: 645  LDAMLTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRT 704

Query: 1286 KTRIFIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSL---SDDVSSYGSAKSYIVMGK 1116
            KTRIFIP GR+MMGCLDETRTLE+GQVFV+FS +R  +L   SD  S  G  + Y++ G 
Sbjct: 705  KTRIFIPNGRSMMGCLDETRTLEHGQVFVKFSGSRFRNLYDSSDMFSERGRGQCYLIKGS 764

Query: 1115 VVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCW 936
            VVVAKNPCLHPGD+R+LKAV+VPALHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCW
Sbjct: 765  VVVAKNPCLHPGDLRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCW 824

Query: 935  DPELIPPRTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKP 756
            DPELIP + I PMDYTP PP+ LDHDV IEEVEEYFTNYIVNDSLG+IANAHT  ADK+ 
Sbjct: 825  DPELIPSQQISPMDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANAHTAHADKES 884

Query: 755  EKAMAEPCIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKL 576
             KAM+EPC+ELA+ FSIAVDFPKTGVPA IP +L  +EYPDFMEKPDKP+Y S NVIGKL
Sbjct: 885  LKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYESRNVIGKL 944

Query: 575  FREVQXXXXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYY 396
            FREV+            T +VA Q YDPDMEVDGF DY+DDAFY+KSNYDYKLGNLM+YY
Sbjct: 945  FREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYY 1004

Query: 395  GIKTEAEILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXX 216
            GIKTEAE+LSG+ MKMSKSFTK+RDA+AI MAVRSL+KEAR+WFN               
Sbjct: 1005 GIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQADDVDA 1064

Query: 215  XXXAWYHVTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIK-KEKARMRKYTDL-SLEH 42
               AWYHVTYH +YWG YNEGM RDH+LSFPWCVY +L+QIK +  AR+R+   L S+E 
Sbjct: 1065 KASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRRNSARIRRSLILPSVER 1124

Query: 41   SFNHGLRIN 15
             F+ GL ++
Sbjct: 1125 QFSRGLHLS 1133


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score = 1187 bits (3070), Expect = 0.0
 Identities = 590/840 (70%), Positives = 684/840 (81%), Gaps = 2/840 (0%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRRMNVEFIEHALERMYYSKDFCYDPKNWLIDQYTR 2349
            VN LVQ+ C+ GP LD+ FY LVDP RM+  +I+HALE++YY ++ CY+P  WL ++Y  
Sbjct: 285  VNLLVQNGCIPGPALDDTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPSRWLFEEYKN 344

Query: 2348 YLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVS 2169
            + +S     SPT+SLD GLVYVRRVQITP +VYFCGPEINVSNRVLR FH  IDNFLR+S
Sbjct: 345  FSRSRKYQGSPTISLDEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRIS 404

Query: 2168 FVDEELEKLYSTDLSSRTSEKTEIYERILSILRSGIVIGDKKFEFLAFSSSQLRENSLWM 1989
            FVDEELEK++ST++ +R   +T IY+RILS LR+GIVIG+K+FEFLAFSSSQLRENS WM
Sbjct: 405  FVDEELEKIHSTNVQAR-GRRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWM 463

Query: 1988 FAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEIILDVNVS 1809
            FA +  G TAA IR WMG+F +IRNVAKYAARLGQSF SSTETLSV++DEI +I D+ + 
Sbjct: 464  FA-SRKGLTAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIM 522

Query: 1808 HGGIEYVFSDGIGKISLEFARRVAKKCGYNS-SPSAFQIRYGGYKGVVAIDPTSSAKLSL 1632
              GI+YVFSDGIGKIS EFA++VA KC     +PSAFQIR GG+KGVVAIDPTSS KLSL
Sbjct: 523  KDGIKYVFSDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSL 582

Query: 1631 RESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAVNQLNTML 1452
            R+SM KY+S NTKLDVLA SK QPC+LNRQLITLLSTL V D AFEKKQ+E V+QLN +L
Sbjct: 583  RKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDRAFEKKQREVVDQLNALL 642

Query: 1451 TDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDLRQKTRIF 1272
            TD L+A EAL+LMS GE TNILKEML+CGYKP+ EPFLSMML+TFRASKLL+LR K RIF
Sbjct: 643  TDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLSMMLETFRASKLLELRTKARIF 702

Query: 1271 IPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKSYIVMGKVVVAKNPC 1092
            + KGR+MMGCLDETRTL YGQVFVQFS +R            S + +IV GKV+VAKNPC
Sbjct: 703  VQKGRSMMGCLDETRTLNYGQVFVQFSGSR------------SERRFIVQGKVIVAKNPC 750

Query: 1091 LHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFVCWDPELIPPR 912
            LHPGDVRVL+AVNVP LHHMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCWDPELIP +
Sbjct: 751  LHPGDVRVLRAVNVPDLHHMVDCVVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYK 810

Query: 911  TIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKKPEKAMAEPC 732
             I+PMDY+PA    LDH+V IEE+EEYFTNYIVNDSLGII+NAHT FAD++P+KAM+ PC
Sbjct: 811  QIDPMDYSPASTTKLDHEVTIEEIEEYFTNYIVNDSLGIISNAHTAFADREPDKAMSRPC 870

Query: 731  IELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIGKLFREVQXXX 552
            +ELAKLFSIAVDFPKTGVPA IP  L VKEYPDFMEKPDKP+Y S+NVIGKLFREV+   
Sbjct: 871  LELAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPSYQSHNVIGKLFREVKNLA 930

Query: 551  XXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTEAEI 372
                     T E   + YDPDMEV+GF DY+DDAF+HKS YDYKLGNLMDYYG+KTEAEI
Sbjct: 931  PNECSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEI 990

Query: 371  LSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXXXXXXXAWYHV 192
            L G IMKMS+SFTK+RDA+AI+MAVRSLRKEAR+WFN                  AWY+V
Sbjct: 991  LGGGIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYV 1050

Query: 191  TYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYTDL-SLEHSFNHGLRIN 15
            TYHPSYWG+YNEGM RDH+LSFPWCVY +L+QIKKEKA +R+  DL SLEH F  GL ++
Sbjct: 1051 TYHPSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKAAVREALDLSSLEHRFQRGLHLH 1110


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score = 1184 bits (3064), Expect = 0.0
 Identities = 599/848 (70%), Positives = 682/848 (80%), Gaps = 11/848 (1%)
 Frame = -1

Query: 2528 VNSLVQHVCLSGPRLDNDFYHLVDPRR--MNVEFIEHALERMYYSKDFCYDPKNWLIDQY 2355
            +N LVQ+ C++GP LD++FY LVDP R  +++  IEHAL+++Y+ K+ CY+P  WL DQY
Sbjct: 288  INLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQY 347

Query: 2354 TRYLQSENPPRSPTLSLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLR 2175
             +Y+ S + P SP +SLD GLVYV RVQ+TP +VYFCGPEINVSNRVLRHF + IDNFLR
Sbjct: 348  RKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLR 407

Query: 2174 VSFVDEELEKLYSTDLSSRTSE-----KTEIYERILSILRSGIVIGDKKFEFLAFSSSQL 2010
            +SF+DE+L+K++STDLS R S      +T IY RILS LR+GI+IGD+KFEFLAFSSSQL
Sbjct: 408  ISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQL 467

Query: 2009 RENSLWMFAPTTTGCTAAHIREWMGDFCRIRNVAKYAARLGQSFGSSTETLSVNRDEIEI 1830
            RE+S WMFA +  G TAA IREWMG+F  IRNVAKYAARLGQSF SS ETLSV+ DEIEI
Sbjct: 468  RESSAWMFA-SRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEIEI 526

Query: 1829 ILDVNVSHGGIEYVFSDGIGKISLEFARRVAKKCGYNSSP-SAFQIRYGGYKGVVAIDPT 1653
            I DV +  G  +YVFSDGIGK+S EFAR+VA KCG   +P SAFQIRYGGYKGVVA DPT
Sbjct: 527  IPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPT 586

Query: 1652 SSAKLSLRESMRKYDSVNTKLDVLACSKPQPCYLNRQLITLLSTLNVKDSAFEKKQKEAV 1473
            SS KLSLR+SMRKY+S  TKLDVLA SK QPC+LNRQLI+LLSTL + D  FEKKQ+EAV
Sbjct: 587  SSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAV 646

Query: 1472 NQLNTMLTDSLKAHEALDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLDL 1293
             QL+ +LTD LKA EAL+LMS GE TNILKE+LICGYKP+ EPFLSMMLQTFRASKLL+L
Sbjct: 647  RQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLEL 706

Query: 1292 RQKTRIFIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLGSLSDDVSSYGSAKS---YIVM 1122
            R KTRIFIP GR+MMGCLDETRTL YGQVFVQ S      L  + S + S++S   +IV 
Sbjct: 707  RTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQ 766

Query: 1121 GKVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGVRPHPNECSGSDLDGDIYFV 942
            G VVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKG+RPHPNECSGSDLDGDIYFV
Sbjct: 767  GLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFV 826

Query: 941  CWDPELIPPRTIEPMDYTPAPPMVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADK 762
            CWD ELIPP+   PMDYTPA  M LDHDV IE+VEEYFTNYIVNDSLGIIANAHTVFAD+
Sbjct: 827  CWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDVEEYFTNYIVNDSLGIIANAHTVFADR 886

Query: 761  KPEKAMAEPCIELAKLFSIAVDFPKTGVPAVIPPHLYVKEYPDFMEKPDKPTYVSYNVIG 582
            +P KA +EPC++LA+ FSIAVDFPKTGVPA IPPHLYVKEYPDFMEKPDKPTY S NVIG
Sbjct: 887  EPHKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIG 946

Query: 581  KLFREVQXXXXXXXXXXXXTLEVAIQSYDPDMEVDGFMDYVDDAFYHKSNYDYKLGNLMD 402
            KLFR V+            T EVA +SYDPDMEVDGF D++DDA YHK NYDYKLGNLMD
Sbjct: 947  KLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMD 1006

Query: 401  YYGIKTEAEILSGNIMKMSKSFTKRRDADAINMAVRSLRKEARTWFNXXXXXXXXXXXXX 222
            YYGIKTEAEIL+G+IMKMSKSFTKRRDA+AI MAVR+LRKEAR WF              
Sbjct: 1007 YYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFK--EKSGSDTEDDA 1064

Query: 221  XXXXXAWYHVTYHPSYWGRYNEGMERDHYLSFPWCVYSQLVQIKKEKARMRKYTDLSLEH 42
                 AWYHVTYHP YWG YN GM RDH+LSFPWCVY +LV+IKK+K  +      +LE 
Sbjct: 1065 YAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNAFP-ALEQ 1123

Query: 41   SFNHGLRI 18
             F  GLR+
Sbjct: 1124 QFRQGLRM 1131