BLASTX nr result
ID: Stemona21_contig00045868
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00045868
(476 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 285 6e-75
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 280 1e-73
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 278 5e-73
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 278 5e-73
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 276 2e-72
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 276 2e-72
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 276 2e-72
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 274 1e-71
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 273 2e-71
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 241 1e-61
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 197 2e-48
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 181 1e-43
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 181 1e-43
ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P2... 173 2e-41
ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082... 167 2e-39
gb|ACS28233.1| replicase [Alternanthera mosaic virus] 164 9e-39
gb|ACS28228.1| replicase [Alternanthera mosaic virus] 164 9e-39
gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosai... 164 9e-39
gb|AFM77886.1| replicase [Hosta virus X] 155 5e-36
ref|NP_148778.1| RNA-dependent RNA polymerase [Cactus virus X] g... 153 2e-35
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 285 bits (728), Expect = 6e-75
Identities = 134/158 (84%), Positives = 144/158 (91%)
Frame = +3
Query: 3 KATLPEHWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTW 182
+A +P HW+ P K++ TLR+LNRFPTPW PDRARARAFTSDVKNSRTGKALHRE+QTW
Sbjct: 567 RAIMPAHWDSPQFEKIIATLRNLNRFPTPWSPDRARARAFTSDVKNSRTGKALHRESQTW 626
Query: 183 KETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKK 362
KETQTMLT+N + AISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKK
Sbjct: 627 KETQTMLTDNAEIHTAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKK 686
Query: 363 LPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
LPHNPPEQFRTFERAFV S+ PVVIFDDYGKLPQGYIE
Sbjct: 687 LPHNPPEQFRTFERAFVSSRGPVVIFDDYGKLPQGYIE 724
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 280 bits (716), Expect = 1e-73
Identities = 135/158 (85%), Positives = 142/158 (89%)
Frame = +3
Query: 3 KATLPEHWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTW 182
+ATLP HW L ++L+TLRSLNRFPTPW PDR RARAFTSDVKNSRTGKALHRE+QTW
Sbjct: 584 RATLPAHWQGHNLERILSTLRSLNRFPTPWSPDRTRARAFTSDVKNSRTGKALHRESQTW 643
Query: 183 KETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKK 362
KETQTMLTEN LAISVIHGAGGSGKSQALQTLLRQ+ LPIEVVLPTNELRLDWLKK
Sbjct: 644 KETQTMLTENTQTELAISVIHGAGGSGKSQALQTLLRQDHSLPIEVVLPTNELRLDWLKK 703
Query: 363 LPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
LPHNPPEQFRTFERAFV S SPVVIFDDYGKLPQGY+E
Sbjct: 704 LPHNPPEQFRTFERAFVSSHSPVVIFDDYGKLPQGYLE 741
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 278 bits (711), Expect = 5e-73
Identities = 131/152 (86%), Positives = 141/152 (92%)
Frame = +3
Query: 21 HWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 200
HW P + ++L+TLRSLNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 585 HWQGPDMERILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTM 644
Query: 201 LTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPP 380
LTEN NLAISVIHGAGGSGKSQALQTLLRQ P+LPIEVVLPTNELRLDWLKKLPHNPP
Sbjct: 645 LTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPP 704
Query: 381 EQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
EQFRTFERAFVCS+ PVVIFDDYGKLPQGY+E
Sbjct: 705 EQFRTFERAFVCSRCPVVIFDDYGKLPQGYLE 736
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 278 bits (711), Expect = 5e-73
Identities = 131/152 (86%), Positives = 141/152 (92%)
Frame = +3
Query: 21 HWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 200
HW P + ++L+TLRSLNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 585 HWQGPDMERILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTM 644
Query: 201 LTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPP 380
LTEN NLAISVIHGAGGSGKSQALQTLLRQ P+LPIEVVLPTNELRLDWLKKLPHNPP
Sbjct: 645 LTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPP 704
Query: 381 EQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
EQFRTFERAFVCS+ PVVIFDDYGKLPQGY+E
Sbjct: 705 EQFRTFERAFVCSRCPVVIFDDYGKLPQGYLE 736
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 276 bits (707), Expect = 2e-72
Identities = 130/152 (85%), Positives = 140/152 (92%)
Frame = +3
Query: 21 HWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 200
HW P + ++L+TLR LNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 585 HWQGPDMERILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTM 644
Query: 201 LTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPP 380
LTEN NLAISVIHGAGGSGKSQALQTLLRQ P+LPIEVVLPTNELRLDWLKKLPHNPP
Sbjct: 645 LTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPP 704
Query: 381 EQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
EQFRTFERAFVCS+ PVVIFDDYGKLPQGY+E
Sbjct: 705 EQFRTFERAFVCSRCPVVIFDDYGKLPQGYLE 736
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 276 bits (707), Expect = 2e-72
Identities = 130/152 (85%), Positives = 140/152 (92%)
Frame = +3
Query: 21 HWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 200
HW P + ++L+TLR LNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 585 HWQGPDMERILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTM 644
Query: 201 LTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPP 380
LTEN NLAISVIHGAGGSGKSQALQTLLRQ P+LPIEVVLPTNELRLDWLKKLPHNPP
Sbjct: 645 LTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPP 704
Query: 381 EQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
EQFRTFERAFVCS+ PVVIFDDYGKLPQGY+E
Sbjct: 705 EQFRTFERAFVCSRCPVVIFDDYGKLPQGYLE 736
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 276 bits (707), Expect = 2e-72
Identities = 130/152 (85%), Positives = 140/152 (92%)
Frame = +3
Query: 21 HWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 200
HW P + ++L+TLR LNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 585 HWQGPDMERILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTM 644
Query: 201 LTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPP 380
LTEN NLAISVIHGAGGSGKSQALQTLLRQ P+LPIEVVLPTNELRLDWLKKLPHNPP
Sbjct: 645 LTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPP 704
Query: 381 EQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
EQFRTFERAFVCS+ PVVIFDDYGKLPQGY+E
Sbjct: 705 EQFRTFERAFVCSRCPVVIFDDYGKLPQGYLE 736
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 274 bits (700), Expect = 1e-71
Identities = 129/152 (84%), Positives = 140/152 (92%)
Frame = +3
Query: 21 HWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 200
HW P ++++L+TLRSLNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQ M
Sbjct: 585 HWQGPDMARILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQAM 644
Query: 201 LTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPP 380
LTEN NLAISVIHGAGGSGKSQALQTLLRQ P+LPIEVVLPTNELRLDW KKLPHNPP
Sbjct: 645 LTENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWPKKLPHNPP 704
Query: 381 EQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
EQFRTFERAFVCS+ PVVIFDDYGKLPQGY+E
Sbjct: 705 EQFRTFERAFVCSRCPVVIFDDYGKLPQGYLE 736
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 273 bits (697), Expect = 2e-71
Identities = 127/152 (83%), Positives = 139/152 (91%)
Frame = +3
Query: 21 HWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTM 200
HW P + ++++TLRS NR+PTPW PDR+RA+AFTSDVKNSRTGKALHRE+Q WKETQTM
Sbjct: 585 HWQGPDMERIISTLRSFNRYPTPWNPDRSRAKAFTSDVKNSRTGKALHRESQVWKETQTM 644
Query: 201 LTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPP 380
L EN NLAISVIHGAGGSGKSQALQTLLRQ P+LPIEVVLPTNELRLDWLKKLPHNPP
Sbjct: 645 LAENSQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPP 704
Query: 381 EQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
EQFRTFERAFVCS+ PVVIFDDYGKLPQGY+E
Sbjct: 705 EQFRTFERAFVCSRCPVVIFDDYGKLPQGYLE 736
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 241 bits (614), Expect = 1e-61
Identities = 112/144 (77%), Positives = 126/144 (87%)
Frame = +3
Query: 45 KVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 224
KV+ TL+ LNR PTPW PDR RARA+ SD+KNSRTGKALH+E+Q WKETQT LTE
Sbjct: 574 KVVITLKQLNRSPTPWTPDRLRARAYASDIKNSRTGKALHKESQNWKETQTRLTETSETR 633
Query: 225 LAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 404
L +SVIHGAGGSGKSQALQT+LR +PDLP+EVVLPTNELR DWL+KLPHNPPEQFRTFER
Sbjct: 634 LGLSVIHGAGGSGKSQALQTMLRNHPDLPVEVVLPTNELRXDWLRKLPHNPPEQFRTFER 693
Query: 405 AFVCSKSPVVIFDDYGKLPQGYIE 476
AFV S +PVVIFDDYGKLPQG++E
Sbjct: 694 AFVSSTAPVVIFDDYGKLPQGFLE 717
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 197 bits (500), Expect = 2e-48
Identities = 90/158 (56%), Positives = 119/158 (75%)
Frame = +3
Query: 3 KATLPEHWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTW 182
K +P H ++L L++L+R PT W PD RA++FTSD+KN RTGK L +E+Q+W
Sbjct: 654 KTGIPVHRETKAPQELLDLLKALSRMPTLWTPDTLRAKSFTSDIKNGRTGKCLQQESQSW 713
Query: 183 KETQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKK 362
KE QT+ ++ + +SVIHGAGGSGKS ALQ LLR +P+LPI+V+LPTNELR+DWL K
Sbjct: 714 KEAQTLKVDHNIRPVPLSVIHGAGGSGKSAALQDLLRDHPELPIQVILPTNELRMDWLSK 773
Query: 363 LPHNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
LP N PE FRTFE+A++ + +P +I DDYGKLPQGY+E
Sbjct: 774 LPRNRPENFRTFEKAYLQTNAPSIIMDDYGKLPQGYVE 811
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 181 bits (458), Expect = 1e-43
Identities = 87/147 (59%), Positives = 107/147 (72%)
Frame = +3
Query: 36 GLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENV 215
G V+ L L+R PTPW P RAR++TSD+KN RTG L +E+ TWKETQT+ E +
Sbjct: 597 GHELVMGVLEKLSRKPTPWTPCPLRARSYTSDIKNHRTGALLLKESATWKETQTLKAERL 656
Query: 216 TANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRT 395
+ +SVIHG GGSGKS A Q LLRQ+PD+ ++VVLPTNELRLDW+ K P PE+ +T
Sbjct: 657 EKTVGLSVIHGCGGSGKSFAFQELLRQHPDVDLQVVLPTNELRLDWMAKAPKVRPEKIKT 716
Query: 396 FERAFVCSKSPVVIFDDYGKLPQGYIE 476
+ERAF SPVV+FDDYGKLP GYIE
Sbjct: 717 YERAFTGVSSPVVLFDDYGKLPAGYIE 743
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 181 bits (458), Expect = 1e-43
Identities = 87/147 (59%), Positives = 107/147 (72%)
Frame = +3
Query: 36 GLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENV 215
G V+ L L+R PTPW P RAR++TSD+KN RTG L +E+ TWKETQT+ E +
Sbjct: 597 GHELVMGVLEKLSRKPTPWTPCPLRARSYTSDIKNHRTGALLLKESATWKETQTLKAERL 656
Query: 216 TANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRT 395
+ +SVIHG GGSGKS A Q LLRQ+PD+ ++VVLPTNELRLDW+ K P PE+ +T
Sbjct: 657 EKTVGLSVIHGCGGSGKSFAFQELLRQHPDVDLQVVLPTNELRLDWMAKAPKVRPEKIKT 716
Query: 396 FERAFVCSKSPVVIFDDYGKLPQGYIE 476
+ERAF SPVV+FDDYGKLP GYIE
Sbjct: 717 YERAFTGVSSPVVLFDDYGKLPAGYIE 743
>ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P20951.1|RDRP_PMV
RecName: Full=RNA replication protein; AltName: Full=176
kDa protein; AltName: Full=ORF1 protein; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=Helicase gi|222331|dbj|BAA03050.1| unnamed
protein product [Papaya mosaic virus]
gi|409915202|gb|AFV46461.1| replicase [Papaya mosaic
virus]
Length = 1547
Score = 173 bits (439), Expect = 2e-41
Identities = 87/143 (60%), Positives = 104/143 (72%)
Frame = +3
Query: 48 VLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 227
V TL L R PTP+ P+ RARA+TSDVKN R G L ++ + W L E L
Sbjct: 756 VYKTLDGLARAPTPYSPNPIRARAYTSDVKNCRIGALLRQQGKEWGCRFDALVEAGKREL 815
Query: 228 AISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 407
AISVIHGAGGSGKSQALQTL++ NP+L I VVLPTNELRLDWL+KLP P E+F+TFE+A
Sbjct: 816 AISVIHGAGGSGKSQALQTLIKDNPELDITVVLPTNELRLDWLRKLPKAPQEKFKTFEKA 875
Query: 408 FVCSKSPVVIFDDYGKLPQGYIE 476
+ +P+VIFDDYGKLP GY+E
Sbjct: 876 LLAPPTPIVIFDDYGKLPAGYVE 898
>ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082367|gb|AAX62019.1|
replicase [Alternanthera mosaic virus]
Length = 1541
Score = 167 bits (422), Expect = 2e-39
Identities = 86/156 (55%), Positives = 104/156 (66%)
Frame = +3
Query: 9 TLPEHWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKE 188
+LP+ E +L L S R PTP+ P RA+A++SDVKNSR G L ++ + W
Sbjct: 737 SLPKCSPEKVNPSLLKMLNSQARAPTPFSPSPIRAKAYSSDVKNSRIGALLRQQGKDWGH 796
Query: 189 TQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLP 368
L EN LAISVIHGAGGSGKS+ALQ L+ NPD + +VLPTNELRLDWLKKLP
Sbjct: 797 RFDSLVENGQRQLAISVIHGAGGSGKSRALQMYLKDNPDADVTIVLPTNELRLDWLKKLP 856
Query: 369 HNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
P +Q +TFE+A + P VIFDDYGKLP GYIE
Sbjct: 857 TFPADQIKTFEKALLAPTKPTVIFDDYGKLPAGYIE 892
>gb|ACS28233.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 164 bits (416), Expect = 9e-39
Identities = 85/156 (54%), Positives = 103/156 (66%)
Frame = +3
Query: 9 TLPEHWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKE 188
+LP+ E +L L R PTP+ P RA+A++SDVKNSR G L ++ + W
Sbjct: 737 SLPKCSPEKVNPSLLKMLNDQARAPTPFSPSPIRAKAYSSDVKNSRIGALLRQQGKDWGH 796
Query: 189 TQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLP 368
L EN LAISVIHGAGGSGKS+ALQ L+ NPD + +VLPTNELRLDWLKKLP
Sbjct: 797 RFDSLVENGQRQLAISVIHGAGGSGKSRALQMYLKDNPDADVTIVLPTNELRLDWLKKLP 856
Query: 369 HNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
P +Q +TFE+A + P VIFDDYGKLP GYIE
Sbjct: 857 TFPADQIKTFEKALLAPIKPTVIFDDYGKLPAGYIE 892
>gb|ACS28228.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 164 bits (416), Expect = 9e-39
Identities = 84/149 (56%), Positives = 101/149 (67%)
Frame = +3
Query: 30 EPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTE 209
+P L K+L R PTP+ P RA+A++SDVKNSR G L ++ + W L E
Sbjct: 747 DPSLLKMLDNQA---RAPTPFSPSPIRAKAYSSDVKNSRIGALLRQQGKDWGHRFDSLVE 803
Query: 210 NVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQF 389
N LAISVIHGAGGSGKS+ALQ L+ NPD + +VLPTNELRLDWLKKLP P +Q
Sbjct: 804 NGQRQLAISVIHGAGGSGKSRALQMYLKDNPDADVTIVLPTNELRLDWLKKLPTFPADQI 863
Query: 390 RTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
+TFE+A + P VIFDDYGKLP GYIE
Sbjct: 864 KTFEKALLAPTKPTVIFDDYGKLPAGYIE 892
>gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosaic virus]
Length = 1541
Score = 164 bits (416), Expect = 9e-39
Identities = 85/156 (54%), Positives = 103/156 (66%)
Frame = +3
Query: 9 TLPEHWNEPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKE 188
+LP+ E +L L R PTP+ P RA+A++SDVKNSR G L ++ + W
Sbjct: 737 SLPKCSPEKVNPSLLKMLDDQARAPTPFSPSPIRAKAYSSDVKNSRIGALLRQQGKDWGH 796
Query: 189 TQTMLTENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLP 368
L EN LAISVIHGAGGSGKS+ALQ L+ NPD + +VLPTNELRLDWLKKLP
Sbjct: 797 RFDSLVENGQRQLAISVIHGAGGSGKSRALQMYLKDNPDADVTIVLPTNELRLDWLKKLP 856
Query: 369 HNPPEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
P +Q +TFE+A + P VIFDDYGKLP GYIE
Sbjct: 857 TFPADQIKTFEKALLAPTKPTVIFDDYGKLPAGYIE 892
>gb|AFM77886.1| replicase [Hosta virus X]
Length = 1473
Score = 155 bits (392), Expect = 5e-36
Identities = 85/153 (55%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Frame = +3
Query: 27 NEPGLSK-VLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTML 203
N +SK +L TLRS+ R PT W PD +RARA+TSD+KN RTG A+H Q WKET +
Sbjct: 664 NPSSVSKEILETLRSVARAPTSWKPDASRARAYTSDIKNRRTGAAVHMAPQAWKETMDFI 723
Query: 204 TENVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIE--VVLPTNELRLDWLKKLPHNP 377
EN L ISVIHGAGGSGKS+ LQ +L + L E VV PTNELR DW+ KLP +
Sbjct: 724 AENAERTLHISVIHGAGGSGKSRCLQEMLNKFHFLFDETLVVCPTNELRRDWIDKLPLSE 783
Query: 378 PEQFRTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
P TFERA + VIFDDY KLP G+IE
Sbjct: 784 PGSVLTFERALMNPAKGTVIFDDYTKLPAGFIE 816
>ref|NP_148778.1| RNA-dependent RNA polymerase [Cactus virus X]
gi|14582654|gb|AAK69579.1|AF308158_1 RNA-dependent RNA
polymerase [Cactus virus X]
Length = 1543
Score = 153 bits (387), Expect = 2e-35
Identities = 78/149 (52%), Positives = 101/149 (67%)
Frame = +3
Query: 30 EPGLSKVLTTLRSLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTE 209
+PGL L ++ ++R PTP+ D RA+AF SDVKN R G L +++ W E+ + TE
Sbjct: 758 DPGL---LEKIKKIHRSPTPFTYDPLRAKAFGSDVKNLRVGALLRHQSKEWLESFSRRTE 814
Query: 210 NVTANLAISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQF 389
+ +LA++VIHGAGGSGKSQALQ LR NPD I VVLPTNELRLDW++KLP P
Sbjct: 815 KDSRSLALTVIHGAGGSGKSQALQDFLRANPDNRITVVLPTNELRLDWVRKLPQAHPSSL 874
Query: 390 RTFERAFVCSKSPVVIFDDYGKLPQGYIE 476
+TFE++ + S I DDY KLP G+IE
Sbjct: 875 KTFEKSLLTPASSTTIMDDYSKLPAGFIE 903