BLASTX nr result

ID: Stemona21_contig00041992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00041992
         (361 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003565630.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    67   2e-09
ref|XP_003565629.1| PREDICTED: F-box protein At4g09920-like [Bra...    67   2e-09
ref|XP_003565610.1| PREDICTED: putative F-box/LRR-repeat protein...    64   3e-08
ref|XP_004288828.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    56   6e-06

>ref|XP_003565630.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like
           [Brachypodium distachyon]
          Length = 520

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = -3

Query: 329 DRISNXXXXXXXXXXXXXXLKTALRTSILSKRWRSLWEFNLISATSLDFGE-DFACSQSP 153
           DR+S                K A+RT+ LS+RW  LW   L ++  LDF +  F  SQS 
Sbjct: 11  DRLSGLPDDVLHSIIGRVPFKQAVRTNALSRRWPRLWLHALAASGVLDFTDRGFVRSQSR 70

Query: 152 THFVANLHRYLRLHGD-RNLERLRILFCPFDLFRYDIEQWITIAVKKQVRE 3
            H VA ++R LR+ G    ++ LR+  CPF  F  D+  WI  A+++  RE
Sbjct: 71  AHIVATVNRCLRVRGGGAPIDVLRVSLCPFGAFERDVVGWIAAALRRGARE 121


>ref|XP_003565629.1| PREDICTED: F-box protein At4g09920-like [Brachypodium distachyon]
          Length = 496

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = -3

Query: 329 DRISNXXXXXXXXXXXXXXLKTALRTSILSKRWRSLWEFNLISATSLDFGE-DFACSQSP 153
           DR+S                K A+RT+ LS+RW  LW   L ++  LDF +  F  SQS 
Sbjct: 11  DRLSGLPDDVLHSIIGRVPFKQAVRTNALSRRWPRLWLHALAASGVLDFTDRGFVRSQSR 70

Query: 152 THFVANLHRYLRLHGD-RNLERLRILFCPFDLFRYDIEQWITIAVKKQVRE 3
            H VA ++R LR+ G    ++ LR+  CPF  F  D+  WI  A+++  RE
Sbjct: 71  AHIVATVNRCLRVRGGGAPIDVLRVSLCPFGAFERDVVGWIAAALRRGARE 121


>ref|XP_003565610.1| PREDICTED: putative F-box/LRR-repeat protein At5g54820-like
           [Brachypodium distachyon]
          Length = 522

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/104 (36%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
 Frame = -3

Query: 329 DRISNXXXXXXXXXXXXXXLKTALRTSILSKRWRSLWEFNLISATSLDFGE-DFACSQSP 153
           DR+S                K A+RTS LS+RW  LW   L ++  LDF + DF    S 
Sbjct: 11  DRLSGLPDDVLHSILARLPFKHAVRTSALSRRWPRLWLHALAASPVLDFTDPDFVRGHSR 70

Query: 152 THFVANLHRYLRLHGDRNLERLRILFCPFDLFRYDIEQWITIAV 21
             FVA ++R L   G   L  LR+ F PF  F  D+  WI+ A+
Sbjct: 71  AQFVATVNRCLSARGAAPLRALRVAFSPFGAFERDVVGWISAAL 114


>ref|XP_004288828.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At5g22670-like
           [Fragaria vesca subsp. vesca]
          Length = 492

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
 Frame = -3

Query: 329 DRISNXXXXXXXXXXXXXXLKTALRTSILSKRWRSLW-EFNLISATSLDF--GEDFAC-- 165
           DRIS               LK A  TS+LS+RW +LW +   ++   +DF  G++F C  
Sbjct: 37  DRISYLPYEILVSIVSLLSLKEAAATSVLSRRWENLWKDTKTLNFQDVDFSVGDNFHCYM 96

Query: 164 -------SQSPTHFVANLHRYLRLHGDRNLERLRILFCPFDLFRYDIEQWITIAVKKQVR 6
                   Q    +V  + R L  H   N+ER R  F    +F+  I++WI  A++K+V+
Sbjct: 97  ALEQELRDQKSREYVNWVDRVLEQHEGHNIERFRAYFFLHSMFKNSIDKWIEFAMEKRVQ 156