BLASTX nr result
ID: Stemona21_contig00041117
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00041117
(388 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006364981.1| PREDICTED: serine hydroxymethyltransferase, ... 72 1e-10
ref|XP_004238029.1| PREDICTED: serine hydroxymethyltransferase, ... 72 1e-10
ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, ... 69 5e-10
ref|XP_002271676.2| PREDICTED: serine hydroxymethyltransferase, ... 69 5e-10
ref|XP_002315363.2| Serine hydroxymethyltransferase family prote... 68 1e-09
ref|XP_006856608.1| hypothetical protein AMTR_s00046p00219150 [A... 68 1e-09
gb|ABK96241.1| unknown [Populus trichocarpa x Populus deltoides] 68 1e-09
ref|XP_004981838.1| PREDICTED: serine hydroxymethyltransferase, ... 68 1e-09
gb|ABO61382.1| mitochondrial serine hydroxymethyltransferase [Po... 68 1e-09
ref|XP_004231981.1| PREDICTED: serine hydroxymethyltransferase, ... 67 3e-09
gb|ACG33140.1| serine hydroxymethyltransferase [Zea mays] gi|224... 67 3e-09
sp|P49358.1|GLYM2_FLAPR RecName: Full=Serine hydroxymethyltransf... 66 4e-09
sp|P49357.1|GLYM1_FLAPR RecName: Full=Serine hydroxymethyltransf... 66 4e-09
ref|XP_006411835.1| hypothetical protein EUTSA_v10024934mg [Eutr... 66 4e-09
ref|XP_006283400.1| hypothetical protein CARUB_v10004441mg, part... 66 4e-09
gb|EMJ06252.1| hypothetical protein PRUPE_ppa004306mg [Prunus pe... 66 4e-09
gb|AAL06913.1| AT4g37930/F20D10_50 [Arabidopsis thaliana] 66 4e-09
ref|NP_195506.1| serine transhydroxymethyltransferase 1 [Arabido... 66 4e-09
ref|XP_006411834.1| hypothetical protein EUTSA_v10024934mg [Eutr... 66 4e-09
ref|XP_002866922.1| hypothetical protein ARALYDRAFT_490821 [Arab... 66 4e-09
>ref|XP_006364981.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Solanum tuberosum]
Length = 519
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/41 (90%), Positives = 39/41 (95%), Gaps = 1/41 (2%)
Frame = -2
Query: 387 ATLSSPA-IQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
ATLSS + IQSEVAKLRQ+VEDYAKQFPTVGFEKETMKYKN
Sbjct: 479 ATLSSDSNIQSEVAKLRQDVEDYAKQFPTVGFEKETMKYKN 519
>ref|XP_004238029.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Solanum lycopersicum]
Length = 519
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/41 (90%), Positives = 39/41 (95%), Gaps = 1/41 (2%)
Frame = -2
Query: 387 ATLSSPA-IQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
ATLSS + IQSEVAKLRQ+VEDYAKQFPTVGFEKETMKYKN
Sbjct: 479 ATLSSDSNIQSEVAKLRQDVEDYAKQFPTVGFEKETMKYKN 519
>ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Vitis vinifera] gi|297736687|emb|CBI25704.3| unnamed
protein product [Vitis vinifera]
Length = 518
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = -2
Query: 378 SSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
SSP +QSE+AKLR EVE+YAKQFPT+GFEKETMKYKN
Sbjct: 482 SSPHLQSEIAKLRHEVEEYAKQFPTIGFEKETMKYKN 518
>ref|XP_002271676.2| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Vitis vinifera] gi|297736682|emb|CBI25699.3| unnamed
protein product [Vitis vinifera]
Length = 518
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = -2
Query: 378 SSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
SSP +QSE+AKLR EVE+YAKQFPT+GFEKETMKYKN
Sbjct: 482 SSPHLQSEIAKLRHEVEEYAKQFPTIGFEKETMKYKN 518
>ref|XP_002315363.2| Serine hydroxymethyltransferase family protein [Populus
trichocarpa] gi|550330643|gb|EEF01534.2| Serine
hydroxymethyltransferase family protein [Populus
trichocarpa]
Length = 520
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = -2
Query: 387 ATLSSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
AT S+P QSE++KLR++VE+YAKQFPT+GFEKETMKYKN
Sbjct: 481 ATQSAPHFQSEISKLRRDVEEYAKQFPTIGFEKETMKYKN 520
>ref|XP_006856608.1| hypothetical protein AMTR_s00046p00219150 [Amborella trichopoda]
gi|548860489|gb|ERN18075.1| hypothetical protein
AMTR_s00046p00219150 [Amborella trichopoda]
Length = 517
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = -2
Query: 387 ATLSSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
ATL +P IQSE+AKLR EVE+YAKQFPT+GFEK TMKYK+
Sbjct: 478 ATLQTPDIQSEIAKLRHEVEEYAKQFPTIGFEKATMKYKD 517
>gb|ABK96241.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 520
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = -2
Query: 387 ATLSSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
AT S+P QSE++KLR++VE+YAKQFPT+GFEKETMKYKN
Sbjct: 481 ATQSAPHFQSEISKLRRDVEEYAKQFPTIGFEKETMKYKN 520
>ref|XP_004981838.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Setaria italica]
Length = 513
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = -2
Query: 384 TLSSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
TL S +IQ+E+AKLR +VE+YAKQFPT+GFEKETMKYKN
Sbjct: 475 TLQSDSIQAEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 513
>gb|ABO61382.1| mitochondrial serine hydroxymethyltransferase [Populus tremuloides]
Length = 520
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = -2
Query: 387 ATLSSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
AT S+P QSE++KLR +VE+YAKQFPT+GFEKETMKYKN
Sbjct: 481 ATQSAPHFQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 520
>ref|XP_004231981.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Solanum lycopersicum]
Length = 518
Score = 66.6 bits (161), Expect = 3e-09
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -2
Query: 378 SSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
SS I+SE+AKLRQ+VE+YAKQFPT+GFEKETMKYKN
Sbjct: 482 SSAPIKSEIAKLRQDVEEYAKQFPTIGFEKETMKYKN 518
>gb|ACG33140.1| serine hydroxymethyltransferase [Zea mays]
gi|224030737|gb|ACN34444.1| unknown [Zea mays]
gi|414872684|tpg|DAA51241.1| TPA: serine
hydroxymethyltransferase isoform 1 [Zea mays]
gi|414872685|tpg|DAA51242.1| TPA: serine
hydroxymethyltransferase isoform 2 [Zea mays]
Length = 513
Score = 66.6 bits (161), Expect = 3e-09
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = -2
Query: 387 ATLSSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
ATL S +IQ E+AKLR +VE++AKQFPT+GFEKETMKYKN
Sbjct: 474 ATLQSDSIQVEIAKLRHDVEEFAKQFPTIGFEKETMKYKN 513
>sp|P49358.1|GLYM2_FLAPR RecName: Full=Serine hydroxymethyltransferase 2, mitochondrial;
Short=SHMT2; AltName: Full=Glycine
hydroxymethyltransferase 2; AltName: Full=Serine
methylase 2; Flags: Precursor gi|437997|emb|CAA81079.1|
glycine hydroxymethyltransferase [Flaveria pringlei]
Length = 517
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = -2
Query: 387 ATLSSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
A + S A QSE++KLR +VE+YAKQFPT+GFEKETMKYKN
Sbjct: 478 AAMQSSAFQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
>sp|P49357.1|GLYM1_FLAPR RecName: Full=Serine hydroxymethyltransferase 1, mitochondrial;
Short=SHMT1; AltName: Full=Glycine
hydroxymethyltransferase 1; AltName: Full=Serine
methylase 1; Flags: Precursor gi|437995|emb|CAA81078.1|
glycine hydroxymethyltransferase [Flaveria pringlei]
Length = 517
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = -2
Query: 381 LSSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
+ S AIQSE++KLR +VE+YAKQFPT+GFEKETMKYKN
Sbjct: 480 MESSAIQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
>ref|XP_006411835.1| hypothetical protein EUTSA_v10024934mg [Eutrema salsugineum]
gi|557113005|gb|ESQ53288.1| hypothetical protein
EUTSA_v10024934mg [Eutrema salsugineum]
Length = 427
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -2
Query: 378 SSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
SS IQSE+AKLR EVE++AKQFPT+GFEKETMKYKN
Sbjct: 391 SSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 427
>ref|XP_006283400.1| hypothetical protein CARUB_v10004441mg, partial [Capsella rubella]
gi|482552105|gb|EOA16298.1| hypothetical protein
CARUB_v10004441mg, partial [Capsella rubella]
Length = 583
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -2
Query: 378 SSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
SS IQSE+AKLR EVE++AKQFPT+GFEKETMKYKN
Sbjct: 547 SSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 583
>gb|EMJ06252.1| hypothetical protein PRUPE_ppa004306mg [Prunus persica]
Length = 517
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = -2
Query: 387 ATLSSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
A L +P QSE+AKLR +VE+YAKQFPT+GFEKET+KYKN
Sbjct: 478 AALPAPHFQSEIAKLRHDVEEYAKQFPTIGFEKETLKYKN 517
>gb|AAL06913.1| AT4g37930/F20D10_50 [Arabidopsis thaliana]
Length = 517
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -2
Query: 378 SSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
SS IQSE+AKLR EVE++AKQFPT+GFEKETMKYKN
Sbjct: 481 SSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517
>ref|NP_195506.1| serine transhydroxymethyltransferase 1 [Arabidopsis thaliana]
gi|51701455|sp|Q9SZJ5.1|GLYM1_ARATH RecName: Full=Serine
hydroxymethyltransferase 1, mitochondrial;
Short=AtSHMT1; AltName: Full=Glycine
hydroxymethyltransferase 1; AltName: Full=Serine
Transhydroxymethyltransferase; Short=STM; AltName:
Full=Serine methylase 1; Flags: Precursor
gi|16226393|gb|AAL16156.1|AF428388_1 AT4g37930/F20D10_50
[Arabidopsis thaliana] gi|4467099|emb|CAB37533.1|
glycine hydroxymethyltransferase like protein
[Arabidopsis thaliana] gi|6899945|emb|CAB71289.1| serine
hydroxymethyl transferase [Arabidopsis thaliana]
gi|7270776|emb|CAB80458.1| glycine
hydroxymethyltransferase like protein [Arabidopsis
thaliana] gi|16323083|gb|AAL15276.1| AT4g37930/F20D10_50
[Arabidopsis thaliana] gi|17979462|gb|AAL50068.1|
AT4g37930/F20D10_50 [Arabidopsis thaliana]
gi|30102486|gb|AAP21161.1| At4g37930/F20D10_50
[Arabidopsis thaliana] gi|332661455|gb|AEE86855.1|
serine transhydroxymethyltransferase 1 [Arabidopsis
thaliana]
Length = 517
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -2
Query: 378 SSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
SS IQSE+AKLR EVE++AKQFPT+GFEKETMKYKN
Sbjct: 481 SSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517
>ref|XP_006411834.1| hypothetical protein EUTSA_v10024934mg [Eutrema salsugineum]
gi|312281845|dbj|BAJ33788.1| unnamed protein product
[Thellungiella halophila] gi|557113004|gb|ESQ53287.1|
hypothetical protein EUTSA_v10024934mg [Eutrema
salsugineum]
Length = 518
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -2
Query: 378 SSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
SS IQSE+AKLR EVE++AKQFPT+GFEKETMKYKN
Sbjct: 482 SSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 518
>ref|XP_002866922.1| hypothetical protein ARALYDRAFT_490821 [Arabidopsis lyrata subsp.
lyrata] gi|297312758|gb|EFH43181.1| hypothetical protein
ARALYDRAFT_490821 [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -2
Query: 378 SSPAIQSEVAKLRQEVEDYAKQFPTVGFEKETMKYKN 268
SS IQSE+AKLR EVE++AKQFPT+GFEKETMKYKN
Sbjct: 481 SSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517