BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00041020
         (594 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   263   3e-68
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   261   1e-67
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   257   1e-66
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   257   1e-66
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]     251   1e-64
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]      245   7e-63
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...   242   5e-62
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   242   6e-62
gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]       241   8e-62
gb|AGH20668.1| reverse transcriptase, partial [Arabis hirsuta]        241   8e-62
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle...   241   8e-62
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   241   1e-61
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle...   240   2e-61
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...   240   2e-61
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         240   2e-61
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   240   2e-61
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle...   239   3e-61
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   239   3e-61
gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]      239   4e-61
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...   239   4e-61

>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  263 bits (671), Expect = 3e-68
 Identities = 128/197 (64%), Positives = 159/197 (80%)
 Frame = +1

Query: 1    GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
            G+ Q+PGIDY ET+APVARL+TIR +IALAAQK+ +IYQLDVK  FLNG L+EE+Y+EQP
Sbjct: 777  GFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQP 836

Query: 181  QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
            +GF ++G E+KV RL KA Y LKQAPRAWYS+ID YF +KGF +S+SEPTLY       I
Sbjct: 837  EGFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDI 896

Query: 361  LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
            LIVS+Y+DDLI+TGN+ KM+++FK DMM T+EMSDLGL+HY LGME     +GIF+S  K
Sbjct: 897  LIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRK 956

Query: 541  YTKDLLKKFKMYGCKLV 591
            Y K++LKKFKM  CK V
Sbjct: 957  YAKNILKKFKMDNCKSV 973


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  261 bits (667), Expect = 1e-67
 Identities = 127/197 (64%), Positives = 159/197 (80%)
 Frame = +1

Query: 1    GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
            G+ Q+PGIDY ET+APVARL+TIR +IALAAQK+ +IYQLDVK  FLNG L+EE+Y+EQP
Sbjct: 914  GFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQP 973

Query: 181  QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
            +GF ++G E+KV RL KA Y LKQAPRAWYS+ID YF +KGF +S+SEPTLY       I
Sbjct: 974  EGFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDI 1033

Query: 361  LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
            LIVS+Y+DDLI+TGN+ KM+++FK DMM T+EMSDLGL+HY LGME     +GIF+S  K
Sbjct: 1034 LIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRK 1093

Query: 541  YTKDLLKKFKMYGCKLV 591
            Y +++LKKFKM  CK V
Sbjct: 1094 YAENILKKFKMDNCKSV 1110


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  257 bits (657), Expect = 1e-66
 Identities = 125/197 (63%), Positives = 158/197 (80%)
 Frame = +1

Query: 1    GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
            G+ Q+PGIDY ET+APVARL+TIR +IALAAQK+ +IYQLDVK  FLNG L+EE+Y+EQP
Sbjct: 704  GFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQP 763

Query: 181  QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
            +GF ++G E+KV RL KA Y LKQAPR WYS+ID YF +KGF +S+SEPTLY       I
Sbjct: 764  EGFSVQGGENKVFRLKKALYGLKQAPRVWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDI 823

Query: 361  LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
            LIVS+Y+DDLI+TGN+ KM+++FK DMM T+EMSDLGL++Y LGME     +GIF+S  K
Sbjct: 824  LIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLYYFLGMEVHQSDEGIFISQRK 883

Query: 541  YTKDLLKKFKMYGCKLV 591
            Y +++LKKFKM  CK V
Sbjct: 884  YAENILKKFKMDNCKSV 900


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  257 bits (657), Expect = 1e-66
 Identities = 123/198 (62%), Positives = 160/198 (80%), Gaps = 1/198 (0%)
 Frame = +1

Query: 1    GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
            GYSQQPG D++ETFAPVARLDTIR +IA+AAQK   +YQLD+K  FLNG LE E+Y+EQP
Sbjct: 977  GYSQQPGXDFHETFAPVARLDTIRTIIAVAAQKGWLLYQLDIKSAFLNGKLEXEIYVEQP 1036

Query: 181  QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQE-GK 357
            QGF+++G+E+KV +L KA Y LKQAPRAWY++ID YF E GF RS SEPTLY K ++  +
Sbjct: 1037 QGFVVDGEENKVYKLKKALYGLKQAPRAWYTQIDSYFIENGFIRSKSEPTLYVKSKDNSQ 1096

Query: 358  ILIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*I 537
            ILIV++Y+DDLIFTGN+ KM+E+F+ +MMK +EMSD+GL+HY LG+E   E+DG+F+   
Sbjct: 1097 ILIVALYVDDLIFTGNDEKMVEKFRNEMMKKYEMSDMGLLHYFLGIEVYQEEDGVFICQK 1156

Query: 538  KYTKDLLKKFKMYGCKLV 591
            +Y + +LKKF M GC  V
Sbjct: 1157 RYVEHILKKFGMAGCNXV 1174


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score =  251 bits (641), Expect = 1e-64
 Identities = 123/197 (62%), Positives = 156/197 (79%)
 Frame = +1

Query: 1    GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
            G+ Q+PGIDY ET+A VARL+TI  +IALAAQK+ +IYQLDVK  FLNG L+EE+Y+EQP
Sbjct: 698  GFKQKPGIDYYETYAHVARLETIHTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQP 757

Query: 181  QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
            + F ++G E+KV RL KA Y LKQAPRAWYS+ID YF +KGF +S+SEP LY K     I
Sbjct: 758  ERFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPILYVKKTGTDI 817

Query: 361  LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
            LIVS+Y+DDLI+TGN+ K++++FK DMM T+EMSDLGL+HY LGME     +GIF+S  K
Sbjct: 818  LIVSLYVDDLIYTGNSEKLMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRK 877

Query: 541  YTKDLLKKFKMYGCKLV 591
            Y +++LKKFKM  CK V
Sbjct: 878  YAENILKKFKMDNCKSV 894


>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  245 bits (625), Expect = 7e-63
 Identities = 121/191 (63%), Positives = 151/191 (79%)
 Frame = +1

Query: 1   GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
           GYSQ+ GIDY+E FAPVARL+T+R++I+LAAQK  RI+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 67  GYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQP 126

Query: 181 QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
           QG+I++G+EDKVLRL KA Y LKQAPRAW ++ID YFNEKGF +   E  LY K Q   I
Sbjct: 127 QGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFNEKGFIKCPYEHALYIKTQNNDI 186

Query: 361 LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
           LI  +Y+DDLIFTGNN  M E+FK +M K FEM+D+GLM Y LG+E   E++GIF++   
Sbjct: 187 LIACLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLMSYYLGIEVKQEENGIFITQEG 246

Query: 541 YTKDLLKKFKM 573
           Y K++LKKFKM
Sbjct: 247 YAKEVLKKFKM 257


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera] gi|389595484|gb|AFK88545.1| reverse
           transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  242 bits (618), Expect = 5e-62
 Identities = 120/191 (62%), Positives = 150/191 (78%)
 Frame = +1

Query: 1   GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
           GYSQ+ GIDY+E FAPVARL+T+R++I+LAAQ K +I+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 67  GYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 126

Query: 181 QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
           QG+I++G+EDKVLRL KA Y LKQAPRAW ++ID YF EK F +   E  LY KIQ+  I
Sbjct: 127 QGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDI 186

Query: 361 LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
           LI  +Y+DDLIFTGNN  M EEFK +M K FEM+D+GLM Y LG+E   E +GIF++   
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 246

Query: 541 YTKDLLKKFKM 573
           Y K++LKKFKM
Sbjct: 247 YAKEVLKKFKM 257


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  242 bits (617), Expect = 6e-62
 Identities = 120/191 (62%), Positives = 150/191 (78%)
 Frame = +1

Query: 1    GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
            GYSQ+ GIDY+E FAPVARL+T+R++I+LAAQ K +I+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 874  GYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 933

Query: 181  QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
            QG+I++G+EDKVLRL KA Y LKQAPRAW ++ID YF EK F +   E  LY KIQ+  I
Sbjct: 934  QGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDI 993

Query: 361  LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
            LI  +Y+DDLIFTGNN  M EEFK +M K FEM+D+GLM Y LG+E   E +GIF++   
Sbjct: 994  LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 1053

Query: 541  YTKDLLKKFKM 573
            Y K++LKKFKM
Sbjct: 1054 YAKEVLKKFKM 1064


>gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]
          Length = 315

 Score =  241 bits (616), Expect = 8e-62
 Identities = 120/191 (62%), Positives = 147/191 (76%)
 Frame = +1

Query: 1   GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
           GYSQ  GIDY+E FAPVARL+T+R++I+LAAQ + RI+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 67  GYSQSAGIDYDEVFAPVARLETVRLIISLAAQNRWRIHQMDVKSAFLNGDLEEEVYIEQP 126

Query: 181 QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
           QG+I++GKEDKVLRL KA Y LKQAPRAW ++ID YF EK F +   E  LY K Q   I
Sbjct: 127 QGYIVKGKEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKSFIKCPYEHALYIKTQNNNI 186

Query: 361 LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
           LI  +Y+DDLIFTG+N  M EEFK +M K FEM+D+GLM Y LG+E   E +GIF+S   
Sbjct: 187 LIACLYVDDLIFTGSNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFISQEG 246

Query: 541 YTKDLLKKFKM 573
           Y K++LKKFKM
Sbjct: 247 YAKEVLKKFKM 257


>gb|AGH20668.1| reverse transcriptase, partial [Arabis hirsuta]
          Length = 315

 Score =  241 bits (616), Expect = 8e-62
 Identities = 122/191 (63%), Positives = 147/191 (76%)
 Frame = +1

Query: 1   GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
           GYSQ+ GIDY+E FAPVARL+TIR++I LAAQ   RI+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 67  GYSQRAGIDYDEVFAPVARLETIRLIILLAAQNNWRIHQMDVKSAFLNGDLEEEVYIEQP 126

Query: 181 QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
           QG+I+EG+E+KVLRL KA Y LKQAPRAW ++ID YF EK F +   E  LY KIQ G I
Sbjct: 127 QGYIVEGEENKVLRLKKALYGLKQAPRAWNTRIDKYFKEKNFIKCPYEHALYIKIQNGDI 186

Query: 361 LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
           LI  +Y+DDLIFTGNN  M EEFK  M K FEM+D+GLM Y LG+E   E +GIF++   
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKMMMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 246

Query: 541 YTKDLLKKFKM 573
           Y K++LKKFKM
Sbjct: 247 YAKEILKKFKM 257


>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  241 bits (616), Expect = 8e-62
 Identities = 119/191 (62%), Positives = 150/191 (78%)
 Frame = +1

Query: 1   GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
           GYSQ+ GIDY+E FAPVARL+T+R++I+LAAQ K +I+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 67  GYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSTFLNGDLEEEVYIEQP 126

Query: 181 QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
           QG+I++G+EDKVLRL KA Y LKQAPRAW ++ID YF EK F +   E  LY KIQ+  I
Sbjct: 127 QGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDI 186

Query: 361 LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
           LI  +Y+DDLIFTGNN  M EEFK +M K FEM+D+GLM Y LG+E   E +GIF++   
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 246

Query: 541 YTKDLLKKFKM 573
           Y K+++KKFKM
Sbjct: 247 YAKEVIKKFKM 257


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  241 bits (615), Expect = 1e-61
 Identities = 117/197 (59%), Positives = 153/197 (77%), Gaps = 1/197 (0%)
 Frame = +1

Query: 1    GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
            GYSQQ G+D++ETF+PVAR +T+RVV+ALAAQ  L +YQ DVK  FLNG LEEEVY+ QP
Sbjct: 887  GYSQQQGVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQP 946

Query: 181  QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQ-EGK 357
            QGF+I G E+KV +L KA Y LKQAPRAWYSKID +F   GF+RS +EPTLY K Q   +
Sbjct: 947  QGFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDE 1006

Query: 358  ILIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*I 537
             L+V +Y+DD+I+ G++  ++ +FK +MM+ FEMSDLGL+ Y LG+E   +KDGIF+S  
Sbjct: 1007 FLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFISQK 1066

Query: 538  KYTKDLLKKFKMYGCKL 588
            KY +DLLKKF+M  C++
Sbjct: 1067 KYAEDLLKKFQMMNCEV 1083


>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  240 bits (613), Expect = 2e-61
 Identities = 119/191 (62%), Positives = 149/191 (78%)
 Frame = +1

Query: 1   GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
           GY Q+ GIDY+E FAPVARL+T+R++I+LAAQ K +I+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 67  GYCQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 126

Query: 181 QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
           QG+I++G+EDKVLRL KA Y LKQAPRAW ++ID YF EK F +   E  LY KIQ+  I
Sbjct: 127 QGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDI 186

Query: 361 LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
           LI  +Y+DDLIFTGNN  M EEFK +M K FEM+D+GLM Y LG+E   E +GIF++   
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 246

Query: 541 YTKDLLKKFKM 573
           Y K++LKKFKM
Sbjct: 247 YAKEVLKKFKM 257


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  240 bits (612), Expect = 2e-61
 Identities = 119/191 (62%), Positives = 150/191 (78%)
 Frame = +1

Query: 1   GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
           GYSQ+ GIDY+E FAPVARL+T+R++I+LAAQ K +I+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 67  GYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 126

Query: 181 QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
           QG+I++G+EDKVLRL KA Y LKQAPRAW ++I+ YF +K F +   E  LY KIQ+  I
Sbjct: 127 QGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRINKYFKKKDFIKCPYEHALYIKIQKDDI 186

Query: 361 LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
           LI  +Y+DDLIFTGNN  M EEFK +M K FEM+D+GLM Y LG+E   E +GIF+S   
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFISQEG 246

Query: 541 YTKDLLKKFKM 573
           Y K++LKKFKM
Sbjct: 247 YAKEVLKKFKM 257


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  240 bits (612), Expect = 2e-61
 Identities = 119/191 (62%), Positives = 149/191 (78%)
 Frame = +1

Query: 1   GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
           GYSQ+ GIDY+E FAPVARL+T+R++I+LAAQ K +I+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 403 GYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 462

Query: 181 QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
           QG+I++G+EDKVLRL K  Y LKQAPRAW ++ID YF EK F +   E  LY KIQ+  I
Sbjct: 463 QGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDI 522

Query: 361 LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
           LI  +Y+DDLIFTGNN  M EEFK +M K FEM+D+GLM Y LG+E   E +GIF++   
Sbjct: 523 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 582

Query: 541 YTKDLLKKFKM 573
           Y K++LKKFKM
Sbjct: 583 YAKEVLKKFKM 593


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  240 bits (612), Expect = 2e-61
 Identities = 119/191 (62%), Positives = 149/191 (78%)
 Frame = +1

Query: 1    GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
            GYSQ+ GIDY+E FAPVARL+T+R++I+LAAQ K +I+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 906  GYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 965

Query: 181  QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
            QG+I++G+EDKVLRL K  Y LKQAPRAW ++ID YF EK F +   E  LY KIQ+  I
Sbjct: 966  QGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDI 1025

Query: 361  LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
            LI  +Y+DDLIFTGNN  M EEFK +M K FEM+D+GLM Y LG+E   E +GIF++   
Sbjct: 1026 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 1085

Query: 541  YTKDLLKKFKM 573
            Y K++LKKFKM
Sbjct: 1086 YAKEVLKKFKM 1096


>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  239 bits (611), Expect = 3e-61
 Identities = 118/191 (61%), Positives = 150/191 (78%)
 Frame = +1

Query: 1   GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
           GYSQ+ GIDY+E FAPVARL+T+R++I+LAAQ K +I+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 67  GYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 126

Query: 181 QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
           QG+I++G+EDKVLRL KA Y LKQAPR+W ++ID YF EK F +   E  LY KIQ+  I
Sbjct: 127 QGYIVKGEEDKVLRLKKALYGLKQAPRSWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDI 186

Query: 361 LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
           LI  +Y+DDLIFTGNN  M EEFK +M K FEM+D+GLM Y LG+E   E +GIF++   
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 246

Query: 541 YTKDLLKKFKM 573
           Y K++LKKFK+
Sbjct: 247 YAKEVLKKFKV 257


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  239 bits (611), Expect = 3e-61
 Identities = 119/191 (62%), Positives = 149/191 (78%)
 Frame = +1

Query: 1    GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
            GY Q+ GIDY+E FAPVARL+T+R++I+LAAQ K +I+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 906  GYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 965

Query: 181  QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
            QG+I++G+EDKVLRL KA Y LKQAPRAW ++ID YF EK F +   E  LY KIQ+  I
Sbjct: 966  QGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDI 1025

Query: 361  LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
            LI  +Y+DDLIFTGNN  M EEFK +M K FEM+D+GLM Y LG+E   E +GIF++   
Sbjct: 1026 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 1085

Query: 541  YTKDLLKKFKM 573
            Y K++LKKFKM
Sbjct: 1086 YAKEVLKKFKM 1096


>gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  239 bits (610), Expect = 4e-61
 Identities = 119/191 (62%), Positives = 149/191 (78%)
 Frame = +1

Query: 1   GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
           GYSQ+ GIDY+E FAPVARL+T+R++I+LAAQK  RI+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 67  GYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQP 126

Query: 181 QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
           QG+I++G+EDKVLRL KA   LKQAPRAW ++ID YF EKGF +   E  LY K Q   I
Sbjct: 127 QGYIVKGEEDKVLRLKKALNGLKQAPRAWNTRIDKYFKEKGFIKCPYEHALYIKTQNNDI 186

Query: 361 LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
           LI  +Y+DDLIFTGNN  M E+FK +M K FEM+D+GLM Y LG+E   E++GIF++   
Sbjct: 187 LIACLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLMSYYLGIEVKQEENGIFITQEG 246

Query: 541 YTKDLLKKFKM 573
           Y K++LKKFKM
Sbjct: 247 YAKEVLKKFKM 257


>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  239 bits (610), Expect = 4e-61
 Identities = 119/191 (62%), Positives = 149/191 (78%)
 Frame = +1

Query: 1   GYSQQPGIDYNETFAPVARLDTIRVVIALAAQKKLRIYQLDVKFVFLNGVLEEEVYLEQP 180
           GYSQ+ GIDY+E FAPVARL+T+R++I+LAAQ K +I+Q+DVK  FLNG LEEEVY+EQP
Sbjct: 67  GYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 126

Query: 181 QGFIIEGKEDKVLRLNKA*YELKQAPRAWYSKIDGYFNEKGFKRSMSEPTLYTKIQEGKI 360
           QG+I++G+EDKVLRL KA Y LKQAPRAW ++ID YF EK F +   E  LY KIQ+  I
Sbjct: 127 QGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDI 186

Query: 361 LIVSIYIDDLIFTGNNIKMIEEFKGDMMKTFEMSDLGLMHYCLGMETS*EKDGIFLS*IK 540
           LI  +Y+DDLIFTGNN  M EEFK +M K FEM+D+GLM Y LG+E   E + IF++   
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEG 246

Query: 541 YTKDLLKKFKM 573
           Y K++LKKFKM
Sbjct: 247 YAKEVLKKFKM 257