BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00040783
         (386 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX99645.1| Pentatricopeptide repeat (PPR) superfamily protei...   103   3e-20
gb|EPS68237.1| hypothetical protein M569_06531 [Genlisea aurea]       102   5e-20
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,...   102   5e-20
emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]   102   7e-20
ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi...   101   9e-20
emb|CBI35666.3| unnamed protein product [Vitis vinifera]              101   9e-20
ref|XP_006368854.1| hypothetical protein POPTR_0001s13120g [Popu...   100   2e-19
ref|XP_006844488.1| hypothetical protein AMTR_s00016p00115350 [A...   100   2e-19
ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
gb|ESW29077.1| hypothetical protein PHAVU_002G041500g [Phaseolus...    97   2e-18
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_004310241.1| PREDICTED: pentatricopeptide repeat-containi...    96   5e-18
ref|XP_006399818.1| hypothetical protein EUTSA_v10012768mg [Eutr...    94   2e-17
ref|XP_006290013.1| hypothetical protein CARUB_v10003644mg [Caps...    91   2e-16
ref|NP_196831.1| protein required for accD RNA editing 1 [Arabid...    91   2e-16
ref|XP_002873605.1| pentatricopeptide repeat-containing protein ...    90   3e-16
ref|XP_002299342.1| predicted protein [Populus trichocarpa]            90   3e-16
gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japo...    82   1e-13
gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonic...    82   1e-13
ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago t...    81   2e-13

>gb|EOX99645.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 762

 Score =  103 bits (256), Expect = 3e-20
 Identities = 48/128 (37%), Positives = 81/128 (63%)
 Frame = +1

Query: 1   RLESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQH 180
           ++E++HL+SL+K  + +EARDFL  M+ +GVP+ P  YK L E C+  +SL DG+  H H
Sbjct: 54  QVENVHLVSLSKQRKLKEARDFLKQMEEAGVPVNPHSYKSLLETCSKVRSLSDGKLIHNH 113

Query: 181 MMNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFR 360
           +  R    + + F+++SL++MY DC SF  A K+FD+M +++   W  ++S Y+  G  +
Sbjct: 114 L--RRTMKNPSGFLENSLLQMYLDCESFLHAEKLFDKMIEKTLASWIILISAYSQKGHLK 171

Query: 361 DAVDLLTE 384
               L ++
Sbjct: 172 KTFSLYSQ 179


>gb|EPS68237.1| hypothetical protein M569_06531 [Genlisea aurea]
          Length = 1003

 Score =  102 bits (254), Expect = 5e-20
 Identities = 52/127 (40%), Positives = 82/127 (64%)
 Frame = +1

Query: 4   LESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHM 183
           LE++HL+SL+K G+  EA +F++ MD S VP+ P+ YK L EAC+  KSL  G+  H+ +
Sbjct: 51  LENVHLVSLSKHGKLEEAHEFVLEMDRSNVPVSPQSYKHLLEACSRLKSLHFGKLIHRRL 110

Query: 184 MNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRD 363
                +D    F+ + +V+MY DC S  DARKVFDEM +R+     T++S YA  G+ ++
Sbjct: 111 -----NDPPPRFLVNYVVQMYCDCGSLSDARKVFDEMRERALGSGITLISAYADKGLTKE 165

Query: 364 AVDLLTE 384
           A+++  +
Sbjct: 166 ALEIFLQ 172


>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 837

 Score =  102 bits (254), Expect = 5e-20
 Identities = 49/125 (39%), Positives = 83/125 (66%)
 Frame = +1

Query: 1   RLESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQH 180
           ++E++HL+SL+K G+ +EAR+FL  M  +G+ + P  Y+ LFE C + KSL DG+  H+ 
Sbjct: 56  QVENVHLVSLSKQGKLKEAREFLKQMVDAGISVSPDSYRNLFEICGNSKSLSDGKIIHE- 114

Query: 181 MMNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFR 360
            + R   +  + F++++++KMY  C S +DA KVFD+M +R+   W T++S YA +G+  
Sbjct: 115 -LLRRTVEKPSVFLENTVLKMYCVCESLEDAYKVFDKMIERNLISWGTIISAYAEHGLLD 173

Query: 361 DAVDL 375
            A+ L
Sbjct: 174 KALSL 178



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 35/119 (29%), Positives = 60/119 (50%)
 Frame = +1

Query: 19  LLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGY 198
           ++  T++G+ + A D    M    V L+  ++    +ACA  K L  GR  H H++  G 
Sbjct: 264 MVGYTQAGKQKNALDLFAKMVCEDVELDEYVFSISLKACAGLKELSFGRQIHGHIVKLGL 323

Query: 199 SDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAVDL 375
               +  +   LV  Y  C SF+ A KVF+ +++ +D  W  M++GY   G F +A+ +
Sbjct: 324 ESEVS--VGTPLVDFYIKCASFELASKVFEGISEPNDVSWSAMITGYCQIGEFEEALKI 380


>emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  102 bits (253), Expect = 7e-20
 Identities = 53/128 (41%), Positives = 78/128 (60%)
 Frame = +1

Query: 1   RLESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQH 180
           +LE+LHL+SL+K G+ +EA DFL  MD + V + P  Y+ LFEAC   +SL DGR  H  
Sbjct: 53  KLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR 112

Query: 181 MMNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFR 360
           +  R    + +  I++ L++MY DC S  D +KVFDEM  ++   W  ++S YA NG   
Sbjct: 113 L--RRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELE 170

Query: 361 DAVDLLTE 384
            A+ L ++
Sbjct: 171 KAIRLFSD 178



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/113 (29%), Positives = 57/113 (50%)
 Frame = +1

Query: 31  TKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSR 210
           ++SGR  +      S+ S GV L   +Y  +F+ACA   +L+ G   H   + RG     
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSY- 424

Query: 211 NAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAV 369
             + + ++V MY  C   D AR+ F+ + +     W  ++SGYA++G   +A+
Sbjct: 425 -LYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEAL 476


>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Vitis vinifera]
          Length = 835

 Score =  101 bits (252), Expect = 9e-20
 Identities = 53/128 (41%), Positives = 78/128 (60%)
 Frame = +1

Query: 1   RLESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQH 180
           +LE+LHL+SL+K G+ +EA DFL  MD + V + P  Y+ LFEAC   +SL DGR  H  
Sbjct: 53  KLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR 112

Query: 181 MMNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFR 360
           +  R    + +  I++ L++MY DC S  D +KVFDEM  ++   W  ++S YA NG   
Sbjct: 113 L--RRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELE 170

Query: 361 DAVDLLTE 384
            A+ L ++
Sbjct: 171 KAIRLFSD 178



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/113 (29%), Positives = 57/113 (50%)
 Frame = +1

Query: 31  TKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSR 210
           ++SGR  +      S+ S GV L   +Y  +F+ACA   +L+ G   H   + RG     
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSY- 424

Query: 211 NAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAV 369
             + + ++V MY  C   D AR+ F+ + +     W  ++SGYA++G   +A+
Sbjct: 425 -LYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEAL 476


>emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  101 bits (252), Expect = 9e-20
 Identities = 53/128 (41%), Positives = 78/128 (60%)
 Frame = +1

Query: 1   RLESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQH 180
           +LE+LHL+SL+K G+ +EA DFL  MD + V + P  Y+ LFEAC   +SL DGR  H  
Sbjct: 53  KLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR 112

Query: 181 MMNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFR 360
           +  R    + +  I++ L++MY DC S  D +KVFDEM  ++   W  ++S YA NG   
Sbjct: 113 L--RRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELE 170

Query: 361 DAVDLLTE 384
            A+ L ++
Sbjct: 171 KAIRLFSD 178



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/113 (29%), Positives = 57/113 (50%)
 Frame = +1

Query: 31  TKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSR 210
           ++SGR  +      S+ S GV L   +Y  +F+ACA   +L+ G   H   + RG     
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSY- 424

Query: 211 NAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAV 369
             + + ++V MY  C   D AR+ F+ + +     W  ++SGYA++G   +A+
Sbjct: 425 -LYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEAL 476


>ref|XP_006368854.1| hypothetical protein POPTR_0001s13120g [Populus trichocarpa]
           gi|550347141|gb|ERP65423.1| hypothetical protein
           POPTR_0001s13120g [Populus trichocarpa]
          Length = 655

 Score =  100 bits (250), Expect = 2e-19
 Identities = 50/105 (47%), Positives = 69/105 (65%)
 Frame = +1

Query: 43  RFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSRNAFI 222
           + +EAR+FL  M+ +G+ + PR YK LFEAC   KSL DGR FH+ M     +     F+
Sbjct: 64  KLKEAREFLKQMEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPE--FL 121

Query: 223 KDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMF 357
           ++S++KMY  C S  DARKVFDEM +R+   W T++S YA NG+F
Sbjct: 122 ENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVF 166



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/119 (25%), Positives = 58/119 (48%)
 Frame = +1

Query: 19  LLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGY 198
           ++  T++ R  +A      M + GV L+  ++  + +ACA  + L+ GR  H H++  G 
Sbjct: 258 MVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGL 317

Query: 199 SDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAVDL 375
                  +  +++ MY  C   D A +VF+ +       W  +++GYA+ G   +A+ L
Sbjct: 318 ESE----VSSAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKL 372


>ref|XP_006844488.1| hypothetical protein AMTR_s00016p00115350 [Amborella trichopoda]
           gi|548846959|gb|ERN06163.1| hypothetical protein
           AMTR_s00016p00115350 [Amborella trichopoda]
          Length = 396

 Score =  100 bits (249), Expect = 2e-19
 Identities = 51/127 (40%), Positives = 79/127 (62%)
 Frame = +1

Query: 4   LESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHM 183
           +E++HL+SL+K G+F+EA+ FL SM+SS +P+ P+ Y  LFEAC D  SL  G+ FH+ M
Sbjct: 60  VENVHLISLSKQGKFQEAQAFLHSMESSNIPVMPQTYVTLFEACGDMGSLSFGKIFHERM 119

Query: 184 MNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRD 363
             +        F+ + L+ MY    S  DA +VF+EM  ++   W  MVS ++ NG   +
Sbjct: 120 --KRVEKEPEIFLGNHLLSMYSKLGSIVDAFQVFNEMPSKNSVTWSIMVSAFSQNGFVSE 177

Query: 364 AVDLLTE 384
           A+ LL++
Sbjct: 178 ALSLLSD 184


>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 47/125 (37%), Positives = 71/125 (56%)
 Frame = +1

Query: 1   RLESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQH 180
           ++E+LHL+SL K G  RE  +F+ +MD  G+ + PR Y+ LF+ C    +L DG+ FH  
Sbjct: 58  QVENLHLISLAKQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNR 117

Query: 181 MMNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFR 360
           +     S   N FI + ++KMY DC SF  A + FD++  +    W T++S Y   G   
Sbjct: 118 LQRMANS---NKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRID 174

Query: 361 DAVDL 375
           +AV L
Sbjct: 175 EAVRL 179



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/119 (27%), Positives = 60/119 (50%)
 Frame = +1

Query: 19  LLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGY 198
           ++  TK+ R R+A      M S GV L+  ++  + +ACA    L  G+  H + +  G 
Sbjct: 265 MVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGL 324

Query: 199 SDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAVDL 375
               +  +   LV  Y  C  F+ AR+ F+ + + +DF W  +++GY  +G F  A+++
Sbjct: 325 ESEVS--VGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEV 381


>gb|ESW29077.1| hypothetical protein PHAVU_002G041500g [Phaseolus vulgaris]
          Length = 765

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 49/125 (39%), Positives = 73/125 (58%)
 Frame = +1

Query: 4   LESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHM 183
           +E+LHL+SLTK G+ RE  +F+  MD  G+ +  + Y+ LF+ C   ++L DGR FH  +
Sbjct: 59  VENLHLISLTKQGKVREVHEFIERMDREGISINLQSYEYLFKMCGRLRALPDGRLFHSRL 118

Query: 184 MNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRD 363
                S   N FI + +++M+ DC SF  A + FD+M  R  F W T++S Y   G   +
Sbjct: 119 QRISNS---NRFIDNCILQMHCDCKSFAAAERFFDKMVDRDLFSWATIISAYTKEGHTYE 175

Query: 364 AVDLL 378
           AV LL
Sbjct: 176 AVRLL 180



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/119 (26%), Positives = 57/119 (47%)
 Frame = +1

Query: 19  LLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGY 198
           ++  T++ R  +A      M S G  L+  ++  + +ACA    L  GR  H + +  G 
Sbjct: 265 MVGYTRAARHTDAMLLFAKMISEGAELDEFVFSIVLKACAALGDLYTGRKIHSYCIKLGL 324

Query: 199 SDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAVDL 375
               +  +   LV  Y  C  FD AR+ F+ + + +D+ W  ++ GY  +G F  A+++
Sbjct: 325 ESEVS--VGTPLVDFYVKCARFDAARRAFETICEPNDYSWSALIVGYCQSGRFDTALEV 381


>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 46/125 (36%), Positives = 73/125 (58%)
 Frame = +1

Query: 1   RLESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQH 180
           ++E+LHL+SL K G+ R+  +F+ +MD +G+ + PR Y+ LF+ C    +L DG+ FH  
Sbjct: 46  QVENLHLISLAKQGKLRQVHEFIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNR 105

Query: 181 MMNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFR 360
           +     S   N FI + +++MY DC SF  A + FD++  R    W T++S Y   G   
Sbjct: 106 LQRMANS---NKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRID 162

Query: 361 DAVDL 375
           +AV L
Sbjct: 163 EAVGL 167



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/119 (26%), Positives = 60/119 (50%)
 Frame = +1

Query: 19  LLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGY 198
           ++  T++ R R+A      M S GV L+  ++  + +ACA    L  G+  H + +  G 
Sbjct: 253 MVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGL 312

Query: 199 SDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAVDL 375
               +  +   LV  Y  C  F+ AR+ F+ + + +DF W  +++GY  +G F  A+++
Sbjct: 313 ESEVS--VGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEV 369


>ref|XP_004310241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 837

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 50/128 (39%), Positives = 76/128 (59%)
 Frame = +1

Query: 1   RLESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQH 180
           ++E++HL+SL+K G+ +EAR+FL  M+ +GV +  + Y+ LFE C       DG+F H+ 
Sbjct: 60  QVENVHLVSLSKQGKMKEAREFLKQMNEAGVAVTAQSYRCLFEKCGLMGYFSDGKFIHEW 119

Query: 181 MMNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFR 360
           +  R    S   F+++  +KMY DC S  DA+KVFDEM  R    W  M+S Y  +G+  
Sbjct: 120 L--RSTVKSPAEFLENDALKMYCDCGSLRDAQKVFDEMRGRDLVSWVIMISAYVESGVLS 177

Query: 361 DAVDLLTE 384
            AV L  +
Sbjct: 178 KAVGLFLD 185



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/119 (24%), Positives = 57/119 (47%)
 Frame = +1

Query: 19  LLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGY 198
           ++  T+ G+  E  +    M    V ++  ++  + +ACA  + L+ GR  H + +  G 
Sbjct: 268 MVGYTEDGKLGEVLESFAEMVRESVEVDDFVFSIVLKACAGLEELNAGRQIHGYSVKLGL 327

Query: 199 SDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAVDL 375
               +  +   LV  Y  C  F+ AR+ F  + + +D  W  ++SGY  NG F + +++
Sbjct: 328 DSEVS--VGTPLVDFYVKCGEFESARRAFKRIDEPNDVSWSAIISGYCQNGQFEECLEI 384



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
 Frame = +1

Query: 34  KSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSRN 213
           ++G+F E  +   ++   GV L P +Y  +F+AC+    ++ G   H   + RG+     
Sbjct: 374 QNGQFEECLEIFQTLIGKGVTLNPYIYTSIFQACSAVADINFGAQVHADAIKRGFV---- 429

Query: 214 AFI--KDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAVDLLT 381
           AF+    +++ MY  C   D A + F+ + K     W  ++ GYA++G   +A+ L +
Sbjct: 430 AFLYGASAMITMYSKCGRLDYAYQAFESIDKPDTVAWTAIICGYAYHGNASEALRLFS 487


>ref|XP_006399818.1| hypothetical protein EUTSA_v10012768mg [Eutrema salsugineum]
           gi|557100908|gb|ESQ41271.1| hypothetical protein
           EUTSA_v10012768mg [Eutrema salsugineum]
          Length = 750

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 49/127 (38%), Positives = 77/127 (60%)
 Frame = +1

Query: 1   RLESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQH 180
           ++E+LHL+SL+K G+  EA +F   MD +GV + P  Y+ LFEAC + +SL  GR  H  
Sbjct: 47  QVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSISPYSYQCLFEACRESRSLSHGRLLHHR 106

Query: 181 MMNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFR 360
           M  R   ++ +  +++ +++MY  C S +DA K+FDEM + +     TM+S YA  G+  
Sbjct: 107 M--RTAFENPSVLLQNCVLQMYCGCGSLEDADKLFDEMPELNTVSRVTMISAYAEQGLLE 164

Query: 361 DAVDLLT 381
            AV L +
Sbjct: 165 KAVGLFS 171


>ref|XP_006290013.1| hypothetical protein CARUB_v10003644mg [Capsella rubella]
           gi|482558719|gb|EOA22911.1| hypothetical protein
           CARUB_v10003644mg [Capsella rubella]
          Length = 752

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 50/127 (39%), Positives = 76/127 (59%)
 Frame = +1

Query: 1   RLESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQH 180
           ++E+LHL+SL+K G+  EA  F   MD +GV + P  Y+ LFEAC + +SL  GR  H  
Sbjct: 49  QVENLHLVSLSKHGKLNEAFAFFQEMDKAGVSVSPYSYQCLFEACRNLRSLSHGRLLHDR 108

Query: 181 MMNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFR 360
           M  R   ++ +  +++ +++MY +C S +DA K+FDEM   +     TMVS YA  G+  
Sbjct: 109 M--RMAFENPSLLLQNCVLQMYCECGSLEDADKLFDEMPDLNAVSRVTMVSAYAERGLLD 166

Query: 361 DAVDLLT 381
            AV L +
Sbjct: 167 KAVGLFS 173



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/117 (27%), Positives = 56/117 (47%)
 Frame = +1

Query: 19  LLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGY 198
           ++  T++GR R+A    V +   GV  +  ++  + +ACA  + L  G+  H  +   G 
Sbjct: 257 MVGYTQAGRARDALKLFVELVIEGVEWDSFVFSVVLKACASLEELKLGKQIHACVAKLGL 316

Query: 199 SDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAV 369
               +  +   LV  Y  C SF+ A   F E+++ +D  W  ++SGY     F +AV
Sbjct: 317 ESEVS--VGTPLVDFYIKCSSFESACCAFQEISEPNDVTWSAIISGYCQMSQFEEAV 371



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/115 (29%), Positives = 55/115 (47%)
 Frame = +1

Query: 40  GRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSRNAF 219
           G   +A      M +SG      +Y  L ++  + ++LD GR  H H+M  G  +  N  
Sbjct: 163 GLLDKAVGLFSGMLASGDEPPSSMYTTLLKSLINPEALDVGRQIHAHVMRAGLCN--NTS 220

Query: 220 IKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAVDLLTE 384
           I+  ++ MY  C     A++VFD+M ++    W  ++ GY   G  RDA+ L  E
Sbjct: 221 IEIGILNMYVKCGWLVGAKRVFDQMAQKKPVAWTGLMVGYTQAGRARDALKLFVE 275


>ref|NP_196831.1| protein required for accD RNA editing 1 [Arabidopsis thaliana]
           gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
           gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis
           thaliana] gi|332004490|gb|AED91873.1| protein required
           for accD RNA editing 1 [Arabidopsis thaliana]
          Length = 752

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 48/127 (37%), Positives = 78/127 (61%)
 Frame = +1

Query: 1   RLESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQH 180
           ++E+LHL+SL+K  +  EA +FL  MD +GV +    Y+ LFEAC + +SL  GR  H  
Sbjct: 49  QVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR 108

Query: 181 MMNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFR 360
           M  R   ++ +  +++ +++MY +C S +DA K+FDEM++ +     TM+S YA  G+  
Sbjct: 109 M--RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILD 166

Query: 361 DAVDLLT 381
            AV L +
Sbjct: 167 KAVGLFS 173



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/117 (27%), Positives = 58/117 (49%)
 Frame = +1

Query: 19  LLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGY 198
           ++  T++GR R+A    V + + GV  +  ++  + +ACA  + L+ G+  H  +   G 
Sbjct: 257 MVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGL 316

Query: 199 SDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAV 369
               +  +   LV  Y  C SF+ A + F E+ + +D  W  ++SGY     F +AV
Sbjct: 317 ESEVS--VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAV 371


>ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319442|gb|EFH49864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 750

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 48/127 (37%), Positives = 77/127 (60%)
 Frame = +1

Query: 1   RLESLHLLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQH 180
           ++E+LHL+SL+K G+  EA +F   MD +GV +    Y+ LFEAC + +SL  GR  H  
Sbjct: 47  QVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNR 106

Query: 181 MMNRGYSDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFR 360
           M  R   ++ +  +++ +++MY +C S +DA K+FDEM+  +     TM+S YA  G+  
Sbjct: 107 M--RMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLD 164

Query: 361 DAVDLLT 381
            AV L +
Sbjct: 165 KAVGLFS 171



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/117 (27%), Positives = 57/117 (48%)
 Frame = +1

Query: 19  LLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGY 198
           ++  T++GR R+A    V + + GV  +  ++  + +ACA  + L  G+  H  +   G 
Sbjct: 255 MVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGL 314

Query: 199 SDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAV 369
               +  +   LV  Y  C SF+ A + F E+ + +D  W  ++SGY     F +AV
Sbjct: 315 ECEVS--VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAV 369



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
 Frame = +1

Query: 34  KSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSRN 213
           + G   +A      M  SG      +Y  L ++  + ++LD GR  H H++  G     N
Sbjct: 159 EQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCS--N 216

Query: 214 AFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDA----VDLLT 381
           A I+  +V MY  C     A++VFD+M  +    W  ++ GY   G  RDA    VDL+T
Sbjct: 217 ASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLIT 276

Query: 382 E 384
           E
Sbjct: 277 E 277


>ref|XP_002299342.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 45/94 (47%), Positives = 61/94 (64%)
 Frame = +1

Query: 76  MDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSRNAFIKDSLVKMYFDC 255
           M+ +G+ + PR YK LFEAC   KSL DGR FH+ M     +     F+++S++KMY  C
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPE--FLENSVLKMYCKC 58

Query: 256 LSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMF 357
            S  DARKVFDEM +R+   W T++S YA NG+F
Sbjct: 59  GSLADARKVFDEMRERNLVSWNTIISAYAENGVF 92



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/117 (25%), Positives = 58/117 (49%)
 Frame = +1

Query: 19  LLSLTKSGRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGY 198
           ++  T++ R  +A      M + GV L+  ++  + +ACA  + L+ GR  H H++  G 
Sbjct: 184 MVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGL 243

Query: 199 SDSRNAFIKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAV 369
                  +   LV  Y  C + + A K F+ +++ +D  W  +++GY   G F +A+
Sbjct: 244 ES--EVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEAL 298


>gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 43/107 (40%), Positives = 63/107 (58%)
 Frame = +1

Query: 58  RDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSRNAFIKDSLV 237
           RD L S+D+  +   PRLY  L  ACA ++SLDD R  H H+    ++ S   F+ +SL+
Sbjct: 49  RDTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGS--VFLDNSLI 106

Query: 238 KMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAVDLL 378
            +Y  C +  DAR+VFD M  R    W ++++GYA N M  +A+ LL
Sbjct: 107 HLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLL 153



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/98 (32%), Positives = 54/98 (55%)
 Frame = +1

Query: 76  MDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSRNAFIKDSLVKMYFDC 255
           M  +G       Y  +F A A   +L+ G++ H HM+  G  +  +AF+ ++++ MY   
Sbjct: 257 MQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSG--ERLSAFVGNTILDMYAKS 314

Query: 256 LSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAV 369
            S  DARKVFD + K+    W +M++ +A  G+ R+AV
Sbjct: 315 GSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAV 352


>gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 43/107 (40%), Positives = 63/107 (58%)
 Frame = +1

Query: 58  RDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSRNAFIKDSLV 237
           RD L S+D+  +   PRLY  L  ACA ++SLDD R  H H+    ++ S   F+ +SL+
Sbjct: 49  RDTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGS--VFLDNSLI 106

Query: 238 KMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAVDLL 378
            +Y  C +  DAR+VFD M  R    W ++++GYA N M  +A+ LL
Sbjct: 107 HLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLL 153



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/98 (32%), Positives = 54/98 (55%)
 Frame = +1

Query: 76  MDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSRNAFIKDSLVKMYFDC 255
           M  +G       Y  +F A A   +L+ G++ H HM+  G  +  +AF+ ++++ MY   
Sbjct: 257 MQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSG--ERLSAFVGNTILDMYAKS 314

Query: 256 LSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAV 369
            S  DARKVFD + K+    W +M++ +A  G+ R+AV
Sbjct: 315 GSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAV 352


>ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355486292|gb|AES67495.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 678

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 45/115 (39%), Positives = 64/115 (55%)
 Frame = +1

Query: 40  GRFREARDFLVSMDSSGVPLEPRLYKPLFEACADWKSLDDGRFFHQHMMNRGYSDSRNAF 219
           G+FREA D    +  SG+  +  +   +  ACA    L+ GR+  + M   G S  RN F
Sbjct: 184 GKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLS--RNVF 241

Query: 220 IKDSLVKMYFDCLSFDDARKVFDEMTKRSDFCWRTMVSGYAWNGMFRDAVDLLTE 384
           +  SLV MY  C S ++AR VFD M ++   CW  M+ GYA NG+ R+A++L  E
Sbjct: 242 VATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFE 296