BLASTX nr result

ID: Stemona21_contig00040708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00040708
         (266 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   143   2e-32
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   143   3e-32
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   142   6e-32
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai...   142   6e-32
gb|ACS68693.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   140   1e-31
gb|ABQ42089.1| ribulose bisphosphate carboxylase small chain (Ru...   140   1e-31
ref|XP_004135094.1| PREDICTED: ribulose bisphosphate carboxylase...   139   4e-31
emb|CCF55356.1| ribulose-1,5-bisphosphate carboxylase small subu...   139   4e-31
gb|ABQ42164.1| ribulose bisphosphate carboxylase small chain (Ru...   139   4e-31
gb|ABQ42090.1| ribulose bisphosphate carboxylase small chain (Ru...   139   4e-31
gb|ABK55670.1| chloroplast ribulose-1,5-bisphosphate carboxylase...   139   4e-31
gb|ABK96567.1| unknown [Populus trichocarpa x Populus deltoides]      139   5e-31
gb|ABK96590.1| unknown [Populus trichocarpa x Populus deltoides]      139   5e-31
gb|ABK96431.1| unknown [Populus trichocarpa x Populus deltoides]      139   5e-31
ref|XP_002305162.2| Ribulose bisphosphate carboxylase small chai...   139   5e-31
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun...   138   7e-31
ref|XP_002329284.1| predicted protein [Populus trichocarpa] gi|5...   138   7e-31
gb|AAA33036.1| ribulose 1,5-bisphosphate carboxylase/oxygenase s...   138   9e-31
sp|Q04450.1|RBS2_MESCR RecName: Full=Ribulose bisphosphate carbo...   138   9e-31
gb|AGV08375.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   137   1e-30

>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 181

 Score =  143 bits (361), Expect = 2e-32
 Identities = 67/86 (77%), Positives = 78/86 (90%)
 Frame = +2

Query: 8   LASVRSSAPAQASMVAPFSGLKSVAAFPVTRKSNDITSVASNGGRVNCMQVWPPTGLKKF 187
           +A+V+S++P QA+MVAPF+GLKS +AFPVTRKSNDITS+ SNGGRV CMQVWPP GLKKF
Sbjct: 11  VAAVKSTSPVQAAMVAPFTGLKSASAFPVTRKSNDITSLPSNGGRVQCMQVWPPVGLKKF 70

Query: 188 ETLSYLPDLTVEQLSKEIDYLLRNGW 265
           ETLSYLP LT  QL+KEIDYLLR+GW
Sbjct: 71  ETLSYLPPLTPTQLAKEIDYLLRSGW 96


>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Panax ginseng]
          Length = 183

 Score =  143 bits (360), Expect = 3e-32
 Identities = 68/86 (79%), Positives = 76/86 (88%)
 Frame = +2

Query: 8   LASVRSSAPAQASMVAPFSGLKSVAAFPVTRKSNDITSVASNGGRVNCMQVWPPTGLKKF 187
           +A+V  + PAQASMVAPF+GLKS AAFPVTRK NDITS+ SNGGRV CM+VWPP GLKKF
Sbjct: 11  VAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKF 70

Query: 188 ETLSYLPDLTVEQLSKEIDYLLRNGW 265
           ETLSYLP LT EQLSKE+DYLLR+GW
Sbjct: 71  ETLSYLPQLTQEQLSKEVDYLLRSGW 96


>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  142 bits (357), Expect = 6e-32
 Identities = 67/88 (76%), Positives = 78/88 (88%)
 Frame = +2

Query: 2   SDLASVRSSAPAQASMVAPFSGLKSVAAFPVTRKSNDITSVASNGGRVNCMQVWPPTGLK 181
           + +A+V  +APAQASMVAPF+GLKS AAFPVTRK NDITS+ SNGGRV CM+VWPP GLK
Sbjct: 9   ASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLK 68

Query: 182 KFETLSYLPDLTVEQLSKEIDYLLRNGW 265
           KFETLSYLP LT E+L+KE+DYLLR+GW
Sbjct: 69  KFETLSYLPPLTNEELAKEVDYLLRSGW 96


>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
           precursor, putative [Ricinus communis]
           gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
           carboxylase small chain 1B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 181

 Score =  142 bits (357), Expect = 6e-32
 Identities = 69/86 (80%), Positives = 77/86 (89%), Gaps = 1/86 (1%)
 Frame = +2

Query: 11  ASVRSSAPAQASMVAPFSGLKSVAAFPVTRKSN-DITSVASNGGRVNCMQVWPPTGLKKF 187
           ASV  S+PAQA+MVAPF+GLKS A+FPVTRK+N DITS+ASNGGRV CMQVWPP G KKF
Sbjct: 9   ASVSRSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQVWPPLGKKKF 68

Query: 188 ETLSYLPDLTVEQLSKEIDYLLRNGW 265
           ETLSYLPDLT EQL+KE+DYLLR GW
Sbjct: 69  ETLSYLPDLTDEQLAKEVDYLLRKGW 94


>gb|ACS68693.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Sonneratia alba] gi|241865463|gb|ACS68764.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Sonneratia alba]
          Length = 173

 Score =  140 bits (354), Expect = 1e-31
 Identities = 67/84 (79%), Positives = 75/84 (89%)
 Frame = +2

Query: 14  SVRSSAPAQASMVAPFSGLKSVAAFPVTRKSNDITSVASNGGRVNCMQVWPPTGLKKFET 193
           +V  +APAQASMVAPF+GLKS +AFP TRK+ DITS+ASNGGRV CMQVWPP GLKKFET
Sbjct: 6   AVNRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGLKKFET 65

Query: 194 LSYLPDLTVEQLSKEIDYLLRNGW 265
           LSYLPDLT EQL KEI+YL+RNGW
Sbjct: 66  LSYLPDLTREQLIKEIEYLIRNGW 89


>gb|ABQ42089.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
           subunit) [Sonneratia alba]
          Length = 178

 Score =  140 bits (354), Expect = 1e-31
 Identities = 67/84 (79%), Positives = 75/84 (89%)
 Frame = +2

Query: 14  SVRSSAPAQASMVAPFSGLKSVAAFPVTRKSNDITSVASNGGRVNCMQVWPPTGLKKFET 193
           +V  +APAQASMVAPF+GLKS +AFP TRK+ DITS+ASNGGRV CMQVWPP GLKKFET
Sbjct: 7   AVNRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGLKKFET 66

Query: 194 LSYLPDLTVEQLSKEIDYLLRNGW 265
           LSYLPDLT EQL KEI+YL+RNGW
Sbjct: 67  LSYLPDLTREQLIKEIEYLIRNGW 90


>ref|XP_004135094.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic-like [Cucumis sativus]
           gi|449512849|ref|XP_004164158.1| PREDICTED: ribulose
           bisphosphate carboxylase small chain, chloroplastic-like
           [Cucumis sativus]
          Length = 185

 Score =  139 bits (350), Expect = 4e-31
 Identities = 66/87 (75%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   LASVRSSAPAQASMVAPFSGLKSVAAFPVTRKSN-DITSVASNGGRVNCMQVWPPTGLKK 184
           +ASV S++PAQASMVAPF+GLKS A FP+TRK+N DIT++ASNGG+V CM+VWPP GL+K
Sbjct: 11  VASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCMKVWPPLGLRK 70

Query: 185 FETLSYLPDLTVEQLSKEIDYLLRNGW 265
           FETLSYLPD++ EQLSKE DYLLRNGW
Sbjct: 71  FETLSYLPDMSNEQLSKECDYLLRNGW 97


>emb|CCF55356.1| ribulose-1,5-bisphosphate carboxylase small subunit [Cucumis
           sativus]
          Length = 185

 Score =  139 bits (350), Expect = 4e-31
 Identities = 66/87 (75%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   LASVRSSAPAQASMVAPFSGLKSVAAFPVTRKSN-DITSVASNGGRVNCMQVWPPTGLKK 184
           +ASV S++PAQASMVAPF+GLKS A FP+TRK+N DIT++ASNGG+V CM+VWPP GL+K
Sbjct: 11  VASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCMKVWPPLGLRK 70

Query: 185 FETLSYLPDLTVEQLSKEIDYLLRNGW 265
           FETLSYLPD++ EQLSKE DYLLRNGW
Sbjct: 71  FETLSYLPDMSNEQLSKECDYLLRNGW 97


>gb|ABQ42164.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
           subunit) [Sonneratia ovata]
          Length = 178

 Score =  139 bits (350), Expect = 4e-31
 Identities = 66/84 (78%), Positives = 74/84 (88%)
 Frame = +2

Query: 14  SVRSSAPAQASMVAPFSGLKSVAAFPVTRKSNDITSVASNGGRVNCMQVWPPTGLKKFET 193
           +V  +APAQASM APF+GLKS +AFP TRK+ DITS+ASNGGRV CMQVWPP GLKKFET
Sbjct: 7   AVNRTAPAQASMAAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGLKKFET 66

Query: 194 LSYLPDLTVEQLSKEIDYLLRNGW 265
           LSYLPDLT EQL KEI+YL+RNGW
Sbjct: 67  LSYLPDLTREQLIKEIEYLIRNGW 90


>gb|ABQ42090.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
           subunit) [Sonneratia apetala]
          Length = 178

 Score =  139 bits (350), Expect = 4e-31
 Identities = 66/84 (78%), Positives = 75/84 (89%)
 Frame = +2

Query: 14  SVRSSAPAQASMVAPFSGLKSVAAFPVTRKSNDITSVASNGGRVNCMQVWPPTGLKKFET 193
           +V  +APAQASMVAPF+GLKS +AFP TRK+ DITS+ASNGGRV CMQVWPP GLKKFET
Sbjct: 7   AVNRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGLKKFET 66

Query: 194 LSYLPDLTVEQLSKEIDYLLRNGW 265
           LSYLPDL+ EQL KEI+YL+RNGW
Sbjct: 67  LSYLPDLSREQLIKEIEYLIRNGW 90


>gb|ABK55670.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Cucumis sativus]
          Length = 125

 Score =  139 bits (350), Expect = 4e-31
 Identities = 66/87 (75%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   LASVRSSAPAQASMVAPFSGLKSVAAFPVTRKSN-DITSVASNGGRVNCMQVWPPTGLKK 184
           +ASV S++PAQASMVAPF+GLKS A FP+TRK+N DIT++ASNGG+V CM+VWPP GL+K
Sbjct: 2   VASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNGGKVQCMKVWPPLGLRK 61

Query: 185 FETLSYLPDLTVEQLSKEIDYLLRNGW 265
           FETLSYLPD++ EQLSKE DYLLRNGW
Sbjct: 62  FETLSYLPDMSNEQLSKECDYLLRNGW 88


>gb|ABK96567.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 181

 Score =  139 bits (349), Expect = 5e-31
 Identities = 66/79 (83%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
 Frame = +2

Query: 32  PAQASMVAPFSGLKSVAAFPVTRKSN-DITSVASNGGRVNCMQVWPPTGLKKFETLSYLP 208
           PAQA+MVAPF+GLKS +AFPVTRK+N DITS+ASNGGRV CMQVWPPTGLKKFETLSYLP
Sbjct: 18  PAQANMVAPFNGLKSTSAFPVTRKANNDITSIASNGGRVQCMQVWPPTGLKKFETLSYLP 77

Query: 209 DLTVEQLSKEIDYLLRNGW 265
           DLT EQL++EI+YLLRN W
Sbjct: 78  DLTTEQLAREIEYLLRNKW 96


>gb|ABK96590.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 189

 Score =  139 bits (349), Expect = 5e-31
 Identities = 66/79 (83%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
 Frame = +2

Query: 32  PAQASMVAPFSGLKSVAAFPVTRKSN-DITSVASNGGRVNCMQVWPPTGLKKFETLSYLP 208
           PAQA+MVAPF+GLKS +AFPVTRK+N DITS+ASNGGRV CMQVWPPTGLKKFETLSYLP
Sbjct: 18  PAQANMVAPFNGLKSTSAFPVTRKANNDITSIASNGGRVQCMQVWPPTGLKKFETLSYLP 77

Query: 209 DLTVEQLSKEIDYLLRNGW 265
           DLT EQL++EI+YLLRN W
Sbjct: 78  DLTTEQLAREIEYLLRNKW 96


>gb|ABK96431.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 182

 Score =  139 bits (349), Expect = 5e-31
 Identities = 67/79 (84%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
 Frame = +2

Query: 32  PAQASMVAPFSGLKSVAAFPV-TRKSNDITSVASNGGRVNCMQVWPPTGLKKFETLSYLP 208
           PAQA+MVAPF+GLKS AAFPV TRK+NDITS+ASNGGRV CMQVWPPTGLKKFETLSYLP
Sbjct: 19  PAQANMVAPFNGLKSTAAFPVSTRKANDITSIASNGGRVQCMQVWPPTGLKKFETLSYLP 78

Query: 209 DLTVEQLSKEIDYLLRNGW 265
           DLT E+L+KEIDYLLR+ W
Sbjct: 79  DLTEEELAKEIDYLLRSKW 97


>ref|XP_002305162.2| Ribulose bisphosphate carboxylase small chain 1A family protein
           [Populus trichocarpa] gi|118487084|gb|ABK95372.1|
           unknown [Populus trichocarpa]
           gi|118488041|gb|ABK95841.1| unknown [Populus
           trichocarpa] gi|550340699|gb|EEE85673.2| Ribulose
           bisphosphate carboxylase small chain 1A family protein
           [Populus trichocarpa]
          Length = 182

 Score =  139 bits (349), Expect = 5e-31
 Identities = 67/79 (84%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
 Frame = +2

Query: 32  PAQASMVAPFSGLKSVAAFPV-TRKSNDITSVASNGGRVNCMQVWPPTGLKKFETLSYLP 208
           PAQA+MVAPF+GLKS AAFPV TRK+NDITS+ASNGGRV CMQVWPPTGLKKFETLSYLP
Sbjct: 19  PAQANMVAPFNGLKSAAAFPVSTRKANDITSIASNGGRVQCMQVWPPTGLKKFETLSYLP 78

Query: 209 DLTVEQLSKEIDYLLRNGW 265
           DLT E+L+KEIDYLLR+ W
Sbjct: 79  DLTEEELAKEIDYLLRSKW 97


>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
           domestica x Pyrus communis]
          Length = 179

 Score =  138 bits (348), Expect = 7e-31
 Identities = 65/80 (81%), Positives = 71/80 (88%)
 Frame = +2

Query: 26  SAPAQASMVAPFSGLKSVAAFPVTRKSNDITSVASNGGRVNCMQVWPPTGLKKFETLSYL 205
           SAPAQA MVAPF+GLKS +AFPVTRKSNDITS+ASNGGRV CMQVWPP GLKKFETLSYL
Sbjct: 15  SAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYL 74

Query: 206 PDLTVEQLSKEIDYLLRNGW 265
           P L+ E L+KE+DYLLR  W
Sbjct: 75  PPLSTESLAKEVDYLLRKNW 94


>ref|XP_002329284.1| predicted protein [Populus trichocarpa]
           gi|566171611|ref|XP_006383456.1| Ribulose bisphosphate
           carboxylase small chain 1A family protein [Populus
           trichocarpa] gi|118488169|gb|ABK95904.1| unknown
           [Populus trichocarpa] gi|118488741|gb|ABK96181.1|
           unknown [Populus trichocarpa]
           gi|550339067|gb|ERP61253.1| Ribulose bisphosphate
           carboxylase small chain 1A family protein [Populus
           trichocarpa]
          Length = 181

 Score =  138 bits (348), Expect = 7e-31
 Identities = 66/79 (83%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
 Frame = +2

Query: 32  PAQASMVAPFSGLKSVAAFPVTRKSN-DITSVASNGGRVNCMQVWPPTGLKKFETLSYLP 208
           PAQA+MVAPF+GLKS +AFPVTRK+N DITS+ASNGGRV CMQVWPPTGLKKFETLSYLP
Sbjct: 18  PAQANMVAPFNGLKSTSAFPVTRKANNDITSIASNGGRVQCMQVWPPTGLKKFETLSYLP 77

Query: 209 DLTVEQLSKEIDYLLRNGW 265
           DLT EQL++EI+YLLRN W
Sbjct: 78  DLTTEQLAQEIEYLLRNKW 96


>gb|AAA33036.1| ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit
           [Mesembryanthemum crystallinum]
          Length = 180

 Score =  138 bits (347), Expect = 9e-31
 Identities = 66/88 (75%), Positives = 74/88 (84%)
 Frame = +2

Query: 2   SDLASVRSSAPAQASMVAPFSGLKSVAAFPVTRKSNDITSVASNGGRVNCMQVWPPTGLK 181
           S+ A V  + PAQASMVAPF+GLKSV+AFPVT+KSNDITS+ASNGGRV CMQVWPP G K
Sbjct: 6   SNAAVVGRTTPAQASMVAPFTGLKSVSAFPVTKKSNDITSIASNGGRVQCMQVWPPLGKK 65

Query: 182 KFETLSYLPDLTVEQLSKEIDYLLRNGW 265
           KFETLSYLP L+ E L KE+ YLL NGW
Sbjct: 66  KFETLSYLPPLSEESLMKEVQYLLNNGW 93


>sp|Q04450.1|RBS2_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
           chloroplastic; Short=RuBisCO small subunit 2; Flags:
           Precursor gi|304444|gb|AAA03694.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Mesembryanthemum crystallinum]
          Length = 180

 Score =  138 bits (347), Expect = 9e-31
 Identities = 66/88 (75%), Positives = 74/88 (84%)
 Frame = +2

Query: 2   SDLASVRSSAPAQASMVAPFSGLKSVAAFPVTRKSNDITSVASNGGRVNCMQVWPPTGLK 181
           S+ A V  + PAQASMVAPF+GLKSV+AFPVT+KSNDITS+ASNGGRV CMQVWPP G K
Sbjct: 6   SNAAVVGRTTPAQASMVAPFTGLKSVSAFPVTKKSNDITSIASNGGRVQCMQVWPPLGKK 65

Query: 182 KFETLSYLPDLTVEQLSKEIDYLLRNGW 265
           KFETLSYLP L+ E L KE+ YLL NGW
Sbjct: 66  KFETLSYLPPLSEESLMKEVQYLLNNGW 93


>gb|AGV08375.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Arachis hypogaea]
          Length = 182

 Score =  137 bits (345), Expect = 1e-30
 Identities = 66/87 (75%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   LASVRSSAPAQASMVAPFSGLKSVAAFPVTRKSN-DITSVASNGGRVNCMQVWPPTGLKK 184
           + +V  ++PAQA+MVAPF+GLKS+A FPVTRK+N DITSVA+NGGRV CMQVWPP G KK
Sbjct: 11  VTTVSRASPAQANMVAPFTGLKSLAGFPVTRKANNDITSVANNGGRVQCMQVWPPVGKKK 70

Query: 185 FETLSYLPDLTVEQLSKEIDYLLRNGW 265
           FETLSYLPDLT EQL KE+DYLLR GW
Sbjct: 71  FETLSYLPDLTDEQLRKEVDYLLRKGW 97