BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00036328
         (479 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ETW98863.1| hypothetical protein ETSY2_42045 [Candidatus Ento...    57   3e-06
emb|CCX10496.1| Protein of unknown function [Pyronema omphalodes...    56   4e-06
gb|AAR22578.1| gag protein [Small ruminant lentivirus]                 56   4e-06
gb|AGS54512.1| gag protein, partial [Small ruminant lentivirus]        56   6e-06
gb|AAR22570.1| gag protein [Small ruminant lentivirus]                 56   6e-06
gb|AAR22580.1| gag protein [Small ruminant lentivirus]                 56   6e-06
gb|AAA43013.1| polyprotein, partial [Equine infectious anemia vi...    55   7e-06
gb|AAP93852.1| gag polyprotein [Ovine lentivirus]                      55   1e-05
emb|CBX25646.1| gag-pol polyprotein, intergenic region [Small ru...    55   1e-05
gb|ABU25394.1| gag protein [Small ruminant lentivirus]                 55   1e-05

>gb|ETW98863.1| hypothetical protein ETSY2_42045 [Candidatus Entotheonella sp.
           TSY2]
          Length = 126

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
 Frame = +2

Query: 38  LPRCYRCGIRGHMASACR--KPLICFSCGREGHWRADCKKYSKPKRGEAVKVARPEEGRP 211
           +P CYRCGIRGH  S CR  K ++C  C ++GH +  CK  S+ +  E V+V+     RP
Sbjct: 41  VPTCYRCGIRGHTVSKCRVDKDIVCHHCQKKGHVQRACK--SRKRTEEEVQVSSSSSSRP 98

Query: 212 R 214
           +
Sbjct: 99  K 99


>emb|CCX10496.1| Protein of unknown function [Pyronema omphalodes CBS 100304]
          Length = 260

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
 Frame = +2

Query: 44  RCYRCGIRGHMASACRKPLICFSCGREGHWRADC--KKYSKPKRGEAVKVARPEEGRP 211
           +C++C  +GH AS+C K + C++CG+ GH   DC  K+  K K  E  + + P+ GRP
Sbjct: 201 KCHKCNEKGHKASSCTKDVECYNCGKRGHMAGDCEEKRRGKRKEVEDRRDSMPKRGRP 258


>gb|AAR22578.1| gag protein [Small ruminant lentivirus]
          Length = 240

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 20/37 (54%), Positives = 26/37 (70%)
 Frame = +2

Query: 38  LPRCYRCGIRGHMASACRKPLICFSCGREGHWRADCK 148
           LPRCY CG  GH A  CR+ +IC +CG+ GH + DC+
Sbjct: 177 LPRCYNCGKPGHQAKQCRQGIICHNCGKRGHMQKDCR 213


>gb|AGS54512.1| gag protein, partial [Small ruminant lentivirus]
          Length = 165

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 19/39 (48%), Positives = 28/39 (71%)
 Frame = +2

Query: 44  RCYRCGIRGHMASACRKPLICFSCGREGHWRADCKKYSK 160
           +CY CGI+GH+A  CR+ +IC  CG+ GH + DC++  K
Sbjct: 119 KCYNCGIQGHLARQCRQGIICHHCGKRGHMQKDCRQKKK 157


>gb|AAR22570.1| gag protein [Small ruminant lentivirus]
          Length = 235

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 20/45 (44%), Positives = 29/45 (64%)
 Frame = +2

Query: 41  PRCYRCGIRGHMASACRKPLICFSCGREGHWRADCKKYSKPKRGE 175
           PRCY CG  GH A  CR+ +IC +CG+ GH + DC++  +   G+
Sbjct: 178 PRCYNCGKPGHRAKECRQGIICHNCGKRGHMQKDCRRKREQGNGK 222


>gb|AAR22580.1| gag protein [Small ruminant lentivirus]
          Length = 240

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 20/47 (42%), Positives = 31/47 (65%)
 Frame = +2

Query: 35  SLPRCYRCGIRGHMASACRKPLICFSCGREGHWRADCKKYSKPKRGE 175
           S  +CY CG  GH+A  CR+ +IC  CG+ GH + DC++  K ++G+
Sbjct: 175 SRQKCYNCGKPGHLARQCRQGIICHHCGKRGHMQKDCRQKQKGQKGQ 221


>gb|AAA43013.1| polyprotein, partial [Equine infectious anemia virus]
          Length = 122

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/52 (44%), Positives = 31/52 (59%)
 Frame = +2

Query: 47  CYRCGIRGHMASACRKPLICFSCGREGHWRADCKKYSKPKRGEAVKVARPEE 202
           CY CG  GH++S CR P +CF C + GH+   CK  S PK G+     RP++
Sbjct: 44  CYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCK--SVPKNGKQGAQGRPQK 93


>gb|AAP93852.1| gag polyprotein [Ovine lentivirus]
          Length = 450

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/58 (41%), Positives = 35/58 (60%)
 Frame = +2

Query: 44  RCYRCGIRGHMASACRKPLICFSCGREGHWRADCKKYSKPKRGEAVKVARPEEGRPRV 217
           +CY CG  GH+A  CR+ +IC +CG+ GH R DC++    K G++ +      G PRV
Sbjct: 387 KCYNCGKEGHLARQCRQGIICHNCGKRGHMRKDCRQKGGDK-GQSQQQGNSRRG-PRV 442


>emb|CBX25646.1| gag-pol polyprotein, intergenic region [Small ruminant lentivirus]
          Length = 216

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 19/36 (52%), Positives = 26/36 (72%)
 Frame = +2

Query: 44  RCYRCGIRGHMASACRKPLICFSCGREGHWRADCKK 151
           +CY CG  GH+A  CR+ +IC +CGR GH R DC++
Sbjct: 178 KCYNCGKEGHLARQCRQGIICHNCGRRGHMRKDCRQ 213


>gb|ABU25394.1| gag protein [Small ruminant lentivirus]
          Length = 228

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = +2

Query: 41  PRCYRCGIRGHMASACRKPLICFSCGREGHWRADCKKYSKPKRGE 175
           PRCY CG  GH A  CR+ +IC +CG+ GH + DC+     + G+
Sbjct: 177 PRCYNCGKPGHQARQCRQGIICHNCGKRGHVQRDCRGKKNMREGQ 221