BLASTX nr result
ID: Stemona21_contig00035764
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00035764
(329 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica G... 71 1e-10
ref|NP_001059837.1| Os07g0528100 [Oryza sativa Japonica Group] g... 71 1e-10
gb|AAU90089.1| putative polyprotein [Oryza sativa Japonica Group] 69 5e-10
emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group] 69 7e-10
ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group] g... 67 2e-09
emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group] 67 2e-09
gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group] 67 2e-09
emb|CAE04466.3| OSJNBa0029L02.7 [Oryza sativa Japonica Group] 67 3e-09
gb|AAK13113.1|AC080019_5 Putative retroelement pol polyprotein [... 63 4e-08
gb|ABB47448.2| retrotransposon protein, putative, Ty1-copia subc... 63 4e-08
gb|ABA95567.1| retrotransposon protein, putative, Ty1-copia subc... 62 1e-07
gb|ABA91088.1| retrotransposon protein, putative, Ty1-copia subc... 62 1e-07
gb|ABF97935.1| retrotransposon protein, putative, unclassified [... 61 2e-07
gb|AAP68410.1| putative gag/pol polyprotein [Oryza sativa Japoni... 61 2e-07
gb|AAX94901.1| retrotransposon protein, putative, unclassified [... 59 9e-07
gb|ABA92575.2| retrotransposon protein, putative, unclassified [... 59 9e-07
>dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1094
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/70 (44%), Positives = 50/70 (71%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
TPP+ AS +S GAP R+RT+++V T+ + DF+YN C++A +EP + +A +E CW +
Sbjct: 542 TPPSDASIESDGAPPRFRTVNNVLATTTPVLDFDYNDECLIAEQEPFSFKEAEKEQCWMK 601
Query: 250 AMEDEMRWVQ 279
AME+EM ++
Sbjct: 602 AMEEEMSSIE 611
>ref|NP_001059837.1| Os07g0528100 [Oryza sativa Japonica Group]
gi|113611373|dbj|BAF21751.1| Os07g0528100, partial
[Oryza sativa Japonica Group]
Length = 1187
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/70 (44%), Positives = 50/70 (71%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
TPP+ AS +S GAP R+RT+++V T+ + DF+YN C++A +EP + +A +E CW +
Sbjct: 635 TPPSDASIESDGAPPRFRTVNNVLATTTPVLDFDYNDECLIAEQEPFSFKEAEKEQCWMK 694
Query: 250 AMEDEMRWVQ 279
AME+EM ++
Sbjct: 695 AMEEEMSSIE 704
>gb|AAU90089.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1094
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/70 (42%), Positives = 50/70 (71%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
TPP+ AS +S GAP R+RT+++V T+ + DF+Y+ C++A +EP + +A +E CW +
Sbjct: 542 TPPSDASIESDGAPPRFRTVNNVLATTTPVLDFDYDDECLIAEQEPFSFKEAEKEQCWMK 601
Query: 250 AMEDEMRWVQ 279
AME+EM ++
Sbjct: 602 AMEEEMSSIE 611
>emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]
Length = 1425
Score = 68.9 bits (167), Expect = 7e-10
Identities = 27/70 (38%), Positives = 46/70 (65%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
TPPT + ++ G P+RYR + + T + DF+Y+ C++A EEP++ +A + CW+R
Sbjct: 869 TPPTSVTPETDGGPVRYRRVQDILSTTEPVLDFDYSDQCLIATEEPTSFVEAEKHECWRR 928
Query: 250 AMEDEMRWVQ 279
AM +E+R V+
Sbjct: 929 AMVEELRSVE 938
>ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group]
gi|20514806|gb|AAM23251.1|AC092553_17 Putative pol
polyprotein [Oryza sativa Japonica Group]
gi|21326494|gb|AAM47622.1|AC122147_11 Putative pol
polyprotein [Oryza sativa Japonica Group]
gi|31430018|gb|AAP51989.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group] gi|113638707|dbj|BAF26012.1| Os10g0130700
[Oryza sativa Japonica Group]
Length = 1426
Score = 67.0 bits (162), Expect = 2e-09
Identities = 25/70 (35%), Positives = 48/70 (68%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
+PP + + P+RYR + + AT + DF+Y+ C+LA+EEP ++A+A Q+ CW++
Sbjct: 870 SPPNSVTPGTNEGPIRYRRVQDILSATEPVLDFDYSDQCLLASEEPMSLAEAEQQLCWRQ 929
Query: 250 AMEDEMRWVQ 279
AM++E++ ++
Sbjct: 930 AMQEELKSIE 939
>emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group]
Length = 1426
Score = 67.0 bits (162), Expect = 2e-09
Identities = 25/70 (35%), Positives = 48/70 (68%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
+PP + + P+RYR + + AT + DF+Y+ C+LA+EEP ++A+A Q+ CW++
Sbjct: 870 SPPNSVTPGTNEGPIRYRRVQDILSATEPVLDFDYSDQCLLASEEPMSLAEAEQQLCWRQ 929
Query: 250 AMEDEMRWVQ 279
AM++E++ ++
Sbjct: 930 AMQEELKSIE 939
>gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1332
Score = 67.0 bits (162), Expect = 2e-09
Identities = 27/60 (45%), Positives = 46/60 (76%)
Frame = +1
Query: 100 TGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKRAMEDEMRWVQ 279
T AP RYRTL+++ + TS + +F+Y+ LC+LAA+EP + +A +ACW++AM DE++ ++
Sbjct: 785 TPAPRRYRTLANINETTSPVREFQYSGLCLLAADEPVSFTEAEVQACWRKAMIDEVKSIE 844
>emb|CAE04466.3| OSJNBa0029L02.7 [Oryza sativa Japonica Group]
Length = 856
Score = 66.6 bits (161), Expect = 3e-09
Identities = 26/70 (37%), Positives = 45/70 (64%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
TPP+ + + P+RYR + + T + DF+Y+ C+LA EEP++ +A Q CW++
Sbjct: 406 TPPSSVTPGTEEGPVRYRRVQDILSTTEPVLDFDYSDQCLLATEEPASFVEAEQHECWRK 465
Query: 250 AMEDEMRWVQ 279
AME+E+R ++
Sbjct: 466 AMEEELRSIE 475
>gb|AAK13113.1|AC080019_5 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
Length = 893
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
+PPT AS + P YRT+ + + + DF Y+ C++AAEEP++ +A QE+CW++
Sbjct: 726 SPPTDASEGTDEGPRSYRTVVNTLATLTPILDFNYSDQCLMAAEEPASFLEAEQESCWRK 785
Query: 250 AMEDEMRWVQ 279
AM +EM ++
Sbjct: 786 AMLEEMESIE 795
>gb|ABB47448.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 886
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
+PPT AS + P YRT+ + + + DF Y+ C++AAEEP++ +A QE+CW++
Sbjct: 719 SPPTDASEGTDEGPRSYRTVVNTLATLTPILDFNYSDQCLMAAEEPASFLEAEQESCWRK 778
Query: 250 AMEDEMRWVQ 279
AM +EM ++
Sbjct: 779 AMLEEMESIE 788
>gb|ABA95567.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1465
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/70 (35%), Positives = 48/70 (68%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
+PP+ AS + AP RY+T+++ T+ + DF+Y+ M+A EEP++ +A ++ CW++
Sbjct: 912 SPPSNASEGTDEAPRRYKTVANTLATTTPILDFDYSDELMMAVEEPASFLEAEKKGCWRK 971
Query: 250 AMEDEMRWVQ 279
AM +EM+ ++
Sbjct: 972 AMIEEMKSIE 981
>gb|ABA91088.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1399
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/70 (35%), Positives = 48/70 (68%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
+PP+ AS + AP RY+T+++ T+ + DF+Y+ M+A EEP++ +A ++ CW++
Sbjct: 846 SPPSNASEGTDEAPRRYKTVANTLATTTPILDFDYSDELMMAVEEPASFLEAEKKGCWRK 905
Query: 250 AMEDEMRWVQ 279
AM +EM+ ++
Sbjct: 906 AMIEEMKSIE 915
>gb|ABF97935.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 670
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/70 (37%), Positives = 47/70 (67%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
TPPT AS + AP RYRT+++ + DF+Y+ C+L+ EEP++ +A +++C ++
Sbjct: 243 TPPTDASRGTDEAPRRYRTVANTLATMQPILDFDYSEECLLSEEEPTSFLEAEKQSCCRK 302
Query: 250 AMEDEMRWVQ 279
AM +EM+ ++
Sbjct: 303 AMLEEMKSIE 312
>gb|AAP68410.1| putative gag/pol polyprotein [Oryza sativa Japonica Group]
Length = 653
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/70 (37%), Positives = 47/70 (67%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
TPPT AS + AP RYRT+++ + DF+Y+ C+L+ EEP++ +A +++C ++
Sbjct: 226 TPPTDASRGTDEAPRRYRTVANTLATMQPILDFDYSEECLLSEEEPTSFLEAEKQSCCRK 285
Query: 250 AMEDEMRWVQ 279
AM +EM+ ++
Sbjct: 286 AMLEEMKSIE 295
>gb|AAX94901.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 838
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/70 (35%), Positives = 47/70 (67%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
T PT A ++ G P RYRT++++ T+ + DF+Y+ C++A EP++ +A ++A W++
Sbjct: 367 TLPTNARTNTDGGPRRYRTVANMLATTTPVLDFDYSNECLMAVGEPASFTEAEKQAWWRK 426
Query: 250 AMEDEMRWVQ 279
AM +EM ++
Sbjct: 427 AMIEEMNAIK 436
>gb|ABA92575.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 866
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/70 (35%), Positives = 47/70 (67%)
Frame = +1
Query: 70 TPPTGASHDSTGAPLRYRTLSSVYDATSSLHDFEYNALCMLAAEEPSNVAQALQEACWKR 249
T PT A ++ G P RYRT++++ T+ + DF+Y+ C++A EP++ +A ++A W++
Sbjct: 367 TLPTNARTNTDGGPRRYRTVANMLATTTPVLDFDYSNECLMAVGEPASFTEAEKQAWWRK 426
Query: 250 AMEDEMRWVQ 279
AM +EM ++
Sbjct: 427 AMIEEMNAIK 436