BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00035755
         (503 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp....   145   5e-33
gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]        144   1e-32
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   144   2e-32
ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutr...   143   3e-32
gb|EOY25899.1| Pentatricopeptide repeat superfamily protein [The...   143   3e-32
ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]...   143   3e-32
ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [S...   141   8e-32
ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi...   141   1e-31
ref|XP_002299231.1| pentatricopeptide repeat-containing family p...   141   1e-31
ref|XP_006573426.1| PREDICTED: pentatricopeptide repeat-containi...   140   2e-31
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   139   4e-31
ref|XP_004986593.1| PREDICTED: pentatricopeptide repeat-containi...   139   5e-31
ref|XP_006385300.1| hypothetical protein POPTR_0003s02590g [Popu...   138   9e-31
ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Caps...   137   1e-30
ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   137   1e-30
ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat...   137   1e-30
ref|XP_002521133.1| pentatricopeptide repeat-containing protein,...   137   1e-30
ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Me...   137   1e-30
ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group] g...   137   1e-30

>ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325073|gb|EFH55493.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  145 bits (366), Expect = 5e-33
 Identities = 78/168 (46%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++  D   G+ +  YI +  V + L L N++L MYTKCG ++ A  LF  M  K+ +
Sbjct: 242 SACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 301

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           TWT M++GY  S     A E+ + MP KD+ +WNALI+A  +N   NEAL  F E+Q  K
Sbjct: 302 TWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQK 361

Query: 362 -VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
            +  N +TLVSTLSACA+VGALELG+WIHSYI+++ I+++  ++S+L+
Sbjct: 362 NIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALI 409



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 45/156 (28%), Positives = 76/156 (48%)
 Frame = +2

Query: 35  GKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEITWTLMIEGYVH 214
           G+ +HG   K  VG  + + NS++  Y  CG +D A  +F  +  K+ ++W  MI G+V 
Sbjct: 152 GQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 211

Query: 215 SGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVTPNCLTLVST 394
            G    ALELF KM  +DV +                               + +T+V  
Sbjct: 212 KGSPDKALELFKKMESEDVKA-------------------------------SHVTMVGV 240

Query: 395 LSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           LSACA++  LE G+ + SYIE + + ++  L+++++
Sbjct: 241 LSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAML 276



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++      G+ IH YI K G+ M   + ++++ MY+KCG ++ A  +F  +  ++  
Sbjct: 375 SACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVF 434

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDV----ASWNALITALAKNNYYNEALNTFKEM 349
            W+ MI G    G    A+++F+KM   +V     ++  +  A +     +EA + F +M
Sbjct: 435 VWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKM 494

Query: 350 Q-KMKVTPNCLTLVSTLSACARVGALE 427
           +    + P        +    R G LE
Sbjct: 495 ESSYGIVPEDKHYACIVDVLGRSGYLE 521


>gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
          Length = 648

 Score =  144 bits (363), Expect = 1e-32
 Identities = 68/167 (40%), Positives = 107/167 (64%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           S C++  D   GK +H ++   GV  T+ L+N+++ MY KCG ++LA  +F+++S +  +
Sbjct: 232 SGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAV 291

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT MI G+   G+   A  LF +MP +DV  WNAL+    +N    EA+  F EMQK K
Sbjct: 292 SWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSK 351

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           V PN +T+V+ LSAC+++GALE+G W+H YI+R  + +   L +SL+
Sbjct: 352 VDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLV 398



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
 Frame = +2

Query: 230 FALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQK--MKVTPNCLTLVSTLSA 403
           FA  LF + P +DV SWN LI    ++    EAL  F  + +    V P+ +T++  +S 
Sbjct: 174 FARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSG 233

Query: 404 CARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           CA++G LELGK +H +++   +    +L +++M
Sbjct: 234 CAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVM 266



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/149 (27%), Positives = 69/149 (46%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SACS+      G  +H YI +  + +++ L  S++ MY KCG +  A+ +F ++ V+N +
Sbjct: 364 SACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNAL 423

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           TWT MI G                               LA + + +EA+  F+ M  + 
Sbjct: 424 TWTSMICG-------------------------------LANHGHADEAIEYFQRMIDLG 452

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHS 448
           + P+ +T +  LSAC   G +E G+   S
Sbjct: 453 LQPDEITFIGVLSACCHAGLVEAGRQFFS 481


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  144 bits (362), Expect = 2e-32
 Identities = 75/168 (44%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++ LD   G+ +  YI + G+ + L L N++L MYTKCG +D A  LF +M  ++  
Sbjct: 235 SACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVF 294

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT+M++GY   G    A  +F+ MP K++A+WN LI+A  +N    EAL  F E+Q  K
Sbjct: 295 SWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSK 354

Query: 362 VT-PNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           +  P+ +TLVSTLSACA++GA++LG WIH YI+R  I ++  L SSL+
Sbjct: 355 IAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLV 402



 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 54/156 (34%), Positives = 81/156 (51%)
 Frame = +2

Query: 35  GKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEITWTLMIEGYVH 214
           G  +HG   K+  GM L +LNS++  Y  CG + +A  LFK +S K              
Sbjct: 145 GTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCK-------------- 190

Query: 215 SGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVTPNCLTLVST 394
                            DV SWN++I+A A+ N   +AL  F +M++  V PN +T+V  
Sbjct: 191 -----------------DVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGV 233

Query: 395 LSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           LSACA+   LE G+W+ SYIER  I++D  L ++++
Sbjct: 234 LSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAML 269



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 41/145 (28%), Positives = 68/145 (46%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++      G  IH YI + G+ +   L++S++ MY KCG ++ A             
Sbjct: 368 SACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKA------------- 414

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
                             LE+F+ +  +DV  W+A+I  L  +     A++ F EMQ+ K
Sbjct: 415 ------------------LEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAK 456

Query: 362 VTPNCLTLVSTLSACARVGALELGK 436
           V PN +T  + L AC+  G ++ G+
Sbjct: 457 VKPNSVTFTNVLCACSHAGLVDEGR 481


>ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutrema salsugineum]
           gi|557111205|gb|ESQ51489.1| hypothetical protein
           EUTSA_v10016305mg [Eutrema salsugineum]
          Length = 739

 Score =  143 bits (360), Expect = 3e-32
 Identities = 77/168 (45%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++  +   G+ +  YI + GV M L L N++L MYTKCG ++ A  LF  M VK+ +
Sbjct: 241 SACAKLRNLEFGRQVCSYIEENGVKMNLTLANAMLDMYTKCGSIEDAKRLFDTMEVKDNV 300

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           TWT M++G+        A ++ + MP KD+ +WNALI+A  +N   NEAL  F E+Q  K
Sbjct: 301 TWTTMLDGFAILEDYEAARDVLNSMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQK 360

Query: 362 -VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
            +  N +TLVSTLSACA+VGALELG+WIHSYI++  I  +  ++S+L+
Sbjct: 361 NIKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRSNFYVTSALI 408



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 43/156 (27%), Positives = 78/156 (50%)
 Frame = +2

Query: 35  GKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEITWTLMIEGYVH 214
           G+ +HG   K  VG  + + NS++  Y  CG +D A                        
Sbjct: 151 GQSLHGMAVKSSVGCDVFVANSLIHCYFSCGDLDSAC----------------------- 187

Query: 215 SGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVTPNCLTLVST 394
                   ++F  +  KDV SWN++IT   +    ++AL  FK+M+  +V  + +T+V  
Sbjct: 188 --------KVFTTIQEKDVVSWNSMITGFVQKGSPDKALELFKKMESEEVKASHVTMVGV 239

Query: 395 LSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           LSACA++  LE G+ + SYIE + ++++  L+++++
Sbjct: 240 LSACAKLRNLEFGRQVCSYIEENGVKMNLTLANAML 275


>gb|EOY25899.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 723

 Score =  143 bits (360), Expect = 3e-32
 Identities = 69/167 (41%), Positives = 108/167 (64%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SACS+  D   GK +H YI K  V   L L N+++ MY  CG MD+AV +F +M  K+ I
Sbjct: 227 SACSKLKDLEVGKRVHKYIQKCKVESNLTLENALMDMYAACGEMDVAVRIFDRMKTKDVI 286

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT ++ G+V+ G    A + F +MP +D  SW A+I    + N + EAL  F+EMQ + 
Sbjct: 287 SWTTIVSGFVNKGEIDLARDYFDRMPERDYVSWTAMIDGYLRVNCFKEALVLFREMQALN 346

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           + P+  T+VS L+ACA++GAL++G+WI +YIER+ ++ D  + ++L+
Sbjct: 347 IRPDEFTMVSILTACAQLGALQIGEWIKTYIERNKVKNDVFVGNALI 393



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 50/159 (31%), Positives = 82/159 (51%)
 Frame = +2

Query: 26  SCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEITWTLMIEG 205
           SC GK +HG+  K G G  + + N+++ MY+ CG M++A  +F  +S K           
Sbjct: 135 SC-GKKLHGHAVKFGFGSNVFVQNALIHMYSLCGQMEMARAVFD-VSCK----------- 181

Query: 206 YVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVTPNCLTL 385
                              +DV +WN +IT   +   Y+E    F EM++  + P  +TL
Sbjct: 182 -------------------RDVITWNVIITGYNRMKQYDETNKLFDEMERNGMVPTSVTL 222

Query: 386 VSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           VS LSAC+++  LE+GK +H YI++  +E +  L ++LM
Sbjct: 223 VSLLSACSKLKDLEVGKRVHKYIQKCKVESNLTLENALM 261



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
 Frame = +2

Query: 155 KKMSVKNEI-TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEAL 331
           ++  VKN++     +I+ Y   G    A  +F+ MP++D  +W A+I  LA N +  EAL
Sbjct: 378 ERNKVKNDVFVGNALIDMYFKCGSIEKAQRVFNGMPWRDKFTWTAMIFGLAINGHGEEAL 437

Query: 332 NTFKEMQKMKVTPNCLTLVSTLSACARVGALELGK 436
             F EM +  + P+ +T +  L AC   G ++ G+
Sbjct: 438 GMFSEMLRASIKPDEVTYIGVLCACTHAGMVDEGR 472


>ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]
           gi|75100656|sp|O82380.1|PP175_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
           gi|3582328|gb|AAC35225.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253207|gb|AEC08301.1| RNA
           editing factor OTP81 [Arabidopsis thaliana]
          Length = 738

 Score =  143 bits (360), Expect = 3e-32
 Identities = 77/168 (45%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++  +   G+ +  YI +  V + L L N++L MYTKCG ++ A  LF  M  K+ +
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 299

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           TWT M++GY  S     A E+ + MP KD+ +WNALI+A  +N   NEAL  F E+Q  K
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK 359

Query: 362 -VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
            +  N +TLVSTLSACA+VGALELG+WIHSYI++  I ++  ++S+L+
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 45/156 (28%), Positives = 76/156 (48%)
 Frame = +2

Query: 35  GKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEITWTLMIEGYVH 214
           G+ +HG   K  VG  + + NS++  Y  CG +D A  +F  +  K+ ++W  MI G+V 
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209

Query: 215 SGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVTPNCLTLVST 394
            G    ALELF KM  +DV +                               + +T+V  
Sbjct: 210 KGSPDKALELFKKMESEDVKA-------------------------------SHVTMVGV 238

Query: 395 LSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           LSACA++  LE G+ + SYIE + + ++  L+++++
Sbjct: 239 LSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 274



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++      G+ IH YI K G+ M   + ++++ MY+KCG ++ +  +F  +  ++  
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDV----ASWNALITALAKNNYYNEALNTFKEM 349
            W+ MI G    G  + A+++F+KM   +V     ++  +  A +     +EA + F +M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492

Query: 350 Q 352
           +
Sbjct: 493 E 493


>ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
           gi|241918518|gb|EER91662.1| hypothetical protein
           SORBIDRAFT_01g023020 [Sorghum bicolor]
          Length = 650

 Score =  141 bits (356), Expect = 8e-32
 Identities = 67/167 (40%), Positives = 106/167 (63%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           S C++  D   GK +H ++   GV  T+ L+N+++ MY KCG ++LA  +F+++  K  +
Sbjct: 232 SGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVV 291

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT MI G+   G+   A  LF +MP +DV  WNAL+    +N    EA+  F EMQ+ K
Sbjct: 292 SWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESK 351

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           V PN +T+V+ LSAC+++GALE+G W+H YI+R  + +   L +SL+
Sbjct: 352 VDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLV 398



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
 Frame = +2

Query: 215 SGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQK--MKVTPNCLTLV 388
           SG    A  LF + P +DV SWN LI    ++    EAL  F  + +    V P+ +T++
Sbjct: 169 SGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMI 228

Query: 389 STLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
             +S CA++G LELGK +H +++   +    +L +++M
Sbjct: 229 GAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVM 266



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SACS+      G  +H YI +  + +++ L  S++ MY KCG +  A+ +FK++  KN +
Sbjct: 364 SACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNAL 423

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           TWT MI G                               LA + + +EA+  F+ M  + 
Sbjct: 424 TWTAMICG-------------------------------LANHGHADEAIEYFQRMIDLG 452

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYI-ERSNIE 472
           + P+ +T +  LSAC   G ++ G+   S + E+ ++E
Sbjct: 453 LQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLE 490


>ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  141 bits (355), Expect = 1e-31
 Identities = 70/167 (41%), Positives = 106/167 (63%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           S+C++  D   G+  H YI + G+ +T+ L N+++ MY KCG ++ A  LF  M+ K  +
Sbjct: 216 SSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMV 275

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT M+ GY  SGL   A +LF +MP KDV  WNA+I      N   EAL  F EMQ M 
Sbjct: 276 SWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMN 335

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           + P+ +T+VS LSAC+++GAL++G WIH YIE+  + ++  L ++L+
Sbjct: 336 INPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALI 382



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 41/166 (24%), Positives = 80/166 (48%)
 Frame = +2

Query: 5   ACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEIT 184
           AC+R      G  I G++  +G    + + N+++ +   CG +D A  +F K  V+    
Sbjct: 116 ACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVR---- 171

Query: 185 WTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKV 364
                                      D+ SWN++I    +  +  EALN ++EM+   +
Sbjct: 172 ---------------------------DLVSWNSMINGYVRRGWAYEALNFYREMKVEGI 204

Query: 365 TPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
            P+ +T++  +S+CA++  L+LG+  H YIE + +++   L+++LM
Sbjct: 205 KPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALM 250



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 5/171 (2%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SACS+      G  IH YI K  + + + L  +++ MY KCG +  A+ +F+++  +N +
Sbjct: 348 SACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSL 407

Query: 182 TWTLMIEGYVHSGLKHFALELFHKM----PYKDVASWNALITALAKNNYYNEALNTFKEM 349
           TWT +I G    G  H A+  F +M       D  ++  L++A        E    F +M
Sbjct: 408 TWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQM 467

Query: 350 -QKMKVTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSL 499
             K  ++P        +    R G LE  +     I+   IE DA +  +L
Sbjct: 468 SSKFNLSPKLKHYSCMVDLLGRAGLLEEAE---ELIKSMPIEADAVVWGAL 515


>ref|XP_002299231.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222846489|gb|EEE84036.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 668

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/167 (40%), Positives = 107/167 (64%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++      G+ IH YI + G+ + + L+N+++ MY KCG ++   VLF  M  K  +
Sbjct: 263 SACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVV 322

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT MI GY  +GL   A +LFH MP K+V +WNA+I +  + N   EAL  F+EMQ   
Sbjct: 323 SWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSN 382

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           + P+ +T++  LSAC+++GAL+ G W H+YI++ N+ +D  L ++L+
Sbjct: 383 MKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALI 429



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
 Frame = +2

Query: 47  HGYICKVGVGMTLDLLN-SILGMYTKCGMMDLAVVLFKKMSVKNEITWTLMIEGYVHSGL 223
           + ++ KV   + L  +   ILG   K G         K M + N I   L+  G   SGL
Sbjct: 157 YSFLFKVCANLVLSYMGFEILGQVLKMGFD-------KDMYLYNGIIHMLVSVG--ESGL 207

Query: 224 KHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVTPNCLTLVSTLSA 403
            H   ++F +   +D+ SWN+LI    +     EA+  +++M    V P+ +T++  +SA
Sbjct: 208 AH---KVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSA 264

Query: 404 CARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           CA++ +L+LG+ IH YIE S + +   L ++LM
Sbjct: 265 CAQLESLKLGREIHRYIEESGLNLKISLVNALM 297



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 5/171 (2%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SACS+      G   H YI K  + + + L  +++ MY KCG M  A+ +F +M  +N +
Sbjct: 395 SACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSL 454

Query: 182 TWTLMIEGYVHSGLKHFALELFHKM----PYKDVASWNALITALAKNNYYNEALNTFKEM 349
           TWT +I G    G  + A+  F KM       D  ++  ++TA        E    F +M
Sbjct: 455 TWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQM 514

Query: 350 Q-KMKVTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSL 499
           + +  ++P        ++   R G LE  +     I+   +E DA +  +L
Sbjct: 515 KSRFNLSPQPKHYSCMVNLLGRAGLLEEAE---ELIKTMPMEADAMVWGAL 562


>ref|XP_006573426.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Glycine max]
          Length = 677

 Score =  140 bits (352), Expect = 2e-31
 Identities = 70/167 (41%), Positives = 104/167 (62%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SACS+  D   G+  H Y+ + G+ +T+ L NS++ MY KCG +  A VLF   + K  +
Sbjct: 259 SACSQLQDLNLGREFHHYVKEHGLELTIPLNNSLMDMYVKCGDLLAAQVLFDNTAHKTLV 318

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT M+ GY   G    A EL +K+P K V  WNA+I+   +     +AL  F EMQ  K
Sbjct: 319 SWTTMVLGYARFGFLGVARELLYKIPEKSVVPWNAIISGCVQAKNSKDALALFNEMQIRK 378

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           + P+ +T+V+ LSAC+++GAL++G WIH YIER NI +D  L ++L+
Sbjct: 379 IDPDKVTMVNCLSACSQLGALDVGIWIHHYIERHNISLDVALGTALV 425



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 43/166 (25%), Positives = 77/166 (46%)
 Frame = +2

Query: 5   ACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEIT 184
           ACS    +C G  + G++ + G    + + N+ + M    G ++ A  +F K  V+    
Sbjct: 159 ACSCPSMNCVGFTVFGHVLRFGFEFDIFVHNASITMLLSYGELEAAYDVFNKGCVR---- 214

Query: 185 WTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKV 364
                                      D+ +WNA+IT   +    NEA   ++EM+  KV
Sbjct: 215 ---------------------------DLVTWNAMITGCVRRGLANEAKKLYREMEAEKV 247

Query: 365 TPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
            PN +T++  +SAC+++  L LG+  H Y++   +E+   L++SLM
Sbjct: 248 KPNEITMIGIVSACSQLQDLNLGREFHHYVKEHGLELTIPLNNSLM 293



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SACS+      G  IH YI +  + + + L  +++ MY KCG +  A+ +F+++  +N +
Sbjct: 391 SACSQLGALDVGIWIHHYIERHNISLDVALGTALVDMYAKCGNIARALQVFQEIPQRNCL 450

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYK----DVASWNALITALAKNNYYNEALNTFKEM 349
           TWT +I G    G    A+  F KM +     D  ++  +++A        E    F EM
Sbjct: 451 TWTAIICGLALHGNARDAISYFSKMIHSGIKPDEITFLGVLSACCHGGLVQEGRKYFSEM 510

Query: 350 -QKMKVTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSL 499
             K  + P        +    R G LE  +     I    IE DA +  +L
Sbjct: 511 SSKYNIAPQLKHYSGMVDLLGRAGHLEEAE---ELIRNMPIEADAAVWGAL 558


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  139 bits (350), Expect = 4e-31
 Identities = 73/168 (43%), Positives = 110/168 (65%), Gaps = 1/168 (0%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++  D   G+ +H YI +  +G +L L N++L MYTKCG ++ A  LF KM  K+ +
Sbjct: 245 SACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIV 304

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT M+ GY   G    A  +F  MP +D+A+WNALI+A  +     EAL  F E+Q  K
Sbjct: 305 SWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSK 364

Query: 362 VT-PNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
              P+ +TLVSTLSACA++GA++LG WIH YI++  ++++  L++SL+
Sbjct: 365 TAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLI 412



 Score =  100 bits (249), Expect = 2e-19
 Identities = 57/166 (34%), Positives = 83/166 (50%)
 Frame = +2

Query: 5   ACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEIT 184
           A S   +   GK  HG + KV +G  + +LNS++  Y KCG + L               
Sbjct: 145 AASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGL--------------- 189

Query: 185 WTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKV 364
                 GY           +F  +P +DV SWN++ITA  +     EAL  F+EM+   V
Sbjct: 190 ------GY----------RVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNV 233

Query: 365 TPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
            PN +T+V  LSACA+    E G+W+HSYIER+ I     LS++++
Sbjct: 234 KPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAML 279



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 45/152 (29%), Positives = 71/152 (46%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++      G  IH YI K G+ +   L  S++ MY KCG +  A+++F         
Sbjct: 378 SACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVF--------- 428

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
                                 H +  KDV  W+A+I  LA + +  +A+  F +MQ+ K
Sbjct: 429 ----------------------HSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDK 466

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIE 457
           V PN +T  + L AC+ VG +E G+   + +E
Sbjct: 467 VKPNAVTFTNILCACSHVGLVEEGRTFFNQME 498


>ref|XP_004986593.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Setaria italica]
          Length = 645

 Score =  139 bits (349), Expect = 5e-31
 Identities = 64/156 (41%), Positives = 102/156 (65%)
 Frame = +2

Query: 35  GKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEITWTLMIEGYVH 214
           GK +H ++   GV  T+ L+N+++ MY KCG ++LA ++F+++  K  ++WT MI G+  
Sbjct: 241 GKRLHEFVECNGVRCTVRLMNAVMYMYVKCGSLELAKLVFERIDTKTAVSWTTMIVGHAT 300

Query: 215 SGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVTPNCLTLVST 394
            G    A +LF +MP +D   WNAL+    ++    EA+  F EMQ+ KVTPN +T+V+ 
Sbjct: 301 LGTMEDARKLFDEMPERDAFPWNALMAGYVQSKQGKEAIALFHEMQEAKVTPNEITMVNL 360

Query: 395 LSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           LSAC+++GALE+G W+H YIER  + +   L +SL+
Sbjct: 361 LSACSQLGALEMGMWVHHYIERHRLSLSVALGTSLV 396



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 42/152 (27%), Positives = 72/152 (47%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SACS+      G  +H YI +  + +++ L  S++ MY KCG +  A+ +FK++  KN +
Sbjct: 362 SACSQLGALEMGMWVHHYIERHRLSLSVALGTSLVDMYAKCGNIKKAICIFKEVPEKNAL 421

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           TWT MI G                               LA + + +EA+  F+ M ++ 
Sbjct: 422 TWTAMICG-------------------------------LANHGHADEAIEHFRRMIELG 450

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIE 457
           + P+ +T +  LSAC   G +E G+   S ++
Sbjct: 451 LQPDDITFIGVLSACCHAGLVEEGREFFSLMD 482


>ref|XP_006385300.1| hypothetical protein POPTR_0003s02590g [Populus trichocarpa]
           gi|550342241|gb|ERP63097.1| hypothetical protein
           POPTR_0003s02590g [Populus trichocarpa]
          Length = 764

 Score =  138 bits (347), Expect = 9e-31
 Identities = 67/167 (40%), Positives = 109/167 (65%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SACS+  D   GK +  YI    V + L + N+++ MY  CG M++A+ +F+ M  ++ I
Sbjct: 248 SACSKLKDLECGKRVQKYIRNGVVEVNLKVENALIDMYASCGEMNVALGIFENMKNRDVI 307

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT ++ G+V++G    A + FHKMP +D  SW A+I    + N Y EAL  F+EMQ  K
Sbjct: 308 SWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSK 367

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           + P+  T+VS L+ACA++GALELG+WI +YI+++ ++ D  + ++L+
Sbjct: 368 IKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALI 414



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/164 (26%), Positives = 82/164 (50%)
 Frame = +2

Query: 11  SRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEITWT 190
           +RS+    G+ +H ++ K G+   +   N+++ MY+ CG++D+A  +F  MS K+     
Sbjct: 150 TRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFD-MSCKS----- 203

Query: 191 LMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVTP 370
                                    DV +WNA+I+   +   Y+EA   F  M++  + P
Sbjct: 204 -------------------------DVVTWNAMISGYNRIKKYDEARKLFDMMEEKGILP 238

Query: 371 NCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
             +T VS LSAC+++  LE GK +  YI    +E++ ++ ++L+
Sbjct: 239 TSVTCVSVLSACSKLKDLECGKRVQKYIRNGVVEVNLKVENALI 282



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
 Frame = +2

Query: 98  SILGMYTKCGMMDLAVVL---FKKMSVKNE-ITWTLMIEGYVHSGLKHFALELFHKMPYK 265
           S+L    + G ++L   +     K  VKN+      +I+ Y   G    AL +F+ +P +
Sbjct: 377 SVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQR 436

Query: 266 DVASWNALITALAKNNYYNEALNTFKEMQKMKVTPNCLTLVSTLSACARVGALELG-KWI 442
           D  +W A++  LA N    EALN F +M K  VTP+ +T V  LSAC   G ++ G K+ 
Sbjct: 437 DKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFF 496

Query: 443 HSYIERSNIE 472
            S   R  IE
Sbjct: 497 ASMTARHGIE 506


>ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Capsella rubella]
           gi|482562457|gb|EOA26647.1| hypothetical protein
           CARUB_v10022711mg [Capsella rubella]
          Length = 739

 Score =  137 bits (346), Expect = 1e-30
 Identities = 74/168 (44%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++  +   G+ +  +I +  V + + L N++L MYTKCG ++ A  LF  M  K+ +
Sbjct: 241 SACTKLRNLEFGRQVCSFIEENRVNVNMTLANAMLDMYTKCGSIEEAKRLFDTMEEKDNV 300

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           T+T M++GY  S     A E+ + MP KD+ +WNALI+A  +N   NEAL  F E+Q  K
Sbjct: 301 TFTTMLDGYAISEDYEAAREVLNSMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQK 360

Query: 362 -VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
            +  N +TLVSTLSACA+VGALELG+WIHSYI++  I ++  ++S+L+
Sbjct: 361 NIKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFYITSALI 408



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 44/156 (28%), Positives = 75/156 (48%)
 Frame = +2

Query: 35  GKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEITWTLMIEGYVH 214
           G+ +HG   K  VG  L + NS++  Y  CG +D A  +F  +  K+ ++W  MI G+V 
Sbjct: 151 GQSLHGMAIKSAVGCDLFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 210

Query: 215 SGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVTPNCLTLVST 394
            G    ALELF KM  +DV +                               + +T+V  
Sbjct: 211 KGSPDKALELFKKMESEDVKA-------------------------------SHVTMVGV 239

Query: 395 LSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           LSAC ++  LE G+ + S+IE + + ++  L+++++
Sbjct: 240 LSACTKLRNLEFGRQVCSFIEENRVNVNMTLANAML 275



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++      G+ IH YI K G+ M   + ++++ MY+KCG ++ A  +F  +  ++  
Sbjct: 374 SACAQVGALELGRWIHSYIKKHGIRMNFYITSALIHMYSKCGDLEKAREVFNCVEKRDVF 433

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDV----ASWNALITALAKNNYYNEALNTFKEM 349
            W+ MI G    G  + A+++F+KM  ++V     ++  L  A +     +EA + F +M
Sbjct: 434 VWSAMIGGLAMHGCGNEAVDMFYKMQEENVKPNGVTFTNLFCACSHTGLVDEAESLFHKM 493


>ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  137 bits (346), Expect = 1e-30
 Identities = 68/167 (40%), Positives = 103/167 (61%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SACS+  D   GK +H Y+    V   L L N+++ MY  CG MD A+ +F+ M+ ++ I
Sbjct: 248 SACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDII 307

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT ++ G+ + G    A   F KMP KD  SW A+I    ++N + EAL  F+ MQ   
Sbjct: 308 SWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATN 367

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           V P+  T+VS L+ACA +GALELG+WI +YI+R+ I+ D  + ++L+
Sbjct: 368 VKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALI 414



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 40/156 (25%), Positives = 72/156 (46%)
 Frame = +2

Query: 35  GKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEITWTLMIEGYVH 214
           G+ +HG++ K G+   + +  +++ MY  CG +D A                        
Sbjct: 158 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTA------------------------ 193

Query: 215 SGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVTPNCLTLVST 394
                    +F   P  DV +WN +I+A  K   + E+   F  M+  +V P  +TLV  
Sbjct: 194 -------RGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLV 246

Query: 395 LSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           LSAC+++  L  GK +HSY++   +E +  L ++++
Sbjct: 247 LSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMI 282


>ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  137 bits (346), Expect = 1e-30
 Identities = 68/167 (40%), Positives = 103/167 (61%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SACS+  D   GK +H Y+    V   L L N+++ MY  CG MD A+ +F+ M+ ++ I
Sbjct: 227 SACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDII 286

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT ++ G+ + G    A   F KMP KD  SW A+I    ++N + EAL  F+ MQ   
Sbjct: 287 SWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATN 346

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           V P+  T+VS L+ACA +GALELG+WI +YI+R+ I+ D  + ++L+
Sbjct: 347 VKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALI 393



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 40/156 (25%), Positives = 72/156 (46%)
 Frame = +2

Query: 35  GKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEITWTLMIEGYVH 214
           G+ +HG++ K G+   + +  +++ MY  CG +D A                        
Sbjct: 137 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTA------------------------ 172

Query: 215 SGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVTPNCLTLVST 394
                    +F   P  DV +WN +I+A  K   + E+   F  M+  +V P  +TLV  
Sbjct: 173 -------RGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLV 225

Query: 395 LSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           LSAC+++  L  GK +HSY++   +E +  L ++++
Sbjct: 226 LSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMI 261


>ref|XP_002521133.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539702|gb|EEF41284.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 274

 Score =  137 bits (346), Expect = 1e-30
 Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 16/182 (8%)
 Frame = +2

Query: 5   ACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEIT 184
           AC+++     GK +HGY+ K+ +     + ++++ MY  CG+M+ A VLF+K   + +I 
Sbjct: 20  ACAKTARLQEGKQVHGYVIKLRLDNDEFVASNLVRMYVMCGVMEDARVLFRKHVFEYDIC 79

Query: 185 ----------------WTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNY 316
                           W +MI+GYV  G    + +LF  MPY+ V SWN +I+  A+N Y
Sbjct: 80  SKSTSDKRKREGIVVLWNVMIDGYVRLGDLAVSRDLFDNMPYRTVVSWNVMISGYAQNGY 139

Query: 317 YNEALNTFKEMQKMKVTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSS 496
           + EA+  F +MQ   ++PN +TLVS L A +R+GALELGKW+H Y E++NIE++  L S+
Sbjct: 140 FKEAIELFHDMQMDDMSPNYVTLVSVLPAISRLGALELGKWVHLYAEKNNIEVNDVLGSA 199

Query: 497 LM 502
           L+
Sbjct: 200 LI 201


>ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 744

 Score =  137 bits (345), Expect = 1e-30
 Identities = 69/168 (41%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++ LD   G+ +H +I + G+  +L L N+IL MY KCG ++ A  LF+KM  K+ +
Sbjct: 246 SACAKKLDLEFGRWVHAFIKRNGIRESLILDNAILDMYMKCGSIEDAERLFRKMGEKDIV 305

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKM- 358
           +WT M+ GY  +G  + A  + + MP +D+ +WNALI+A  ++    EAL+ F E+Q + 
Sbjct: 306 SWTTMLVGYARAGNFNAARSILNTMPSQDIVAWNALISAYEQSGKPKEALSVFNELQLIK 365

Query: 359 KVTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           K  P+ +TLV  LSACA++GA++LG WIH YI++  I+ +  L+++L+
Sbjct: 366 KAEPDEVTLVCALSACAQLGAIDLGGWIHVYIKKQGIKFNCHLTTALI 413



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
 Frame = +2

Query: 35  GKVIHGYICKV-GVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEITWTLMIEGYV 211
           G+ +HG + K   VG+ + +LNS++  Y  CG +D A ++F+ M  +             
Sbjct: 155 GRGLHGMVVKGRDVGLDIFVLNSLIHFYADCGCLDEAYLIFENMQTR------------- 201

Query: 212 HSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVTPNCLTLVS 391
                             DV SWN +I   A+  Y +EAL  F  M +  V PN +T+++
Sbjct: 202 ------------------DVVSWNTMILGFAEGGYADEALKIFHRMGEENVRPNDVTMMA 243

Query: 392 TLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
            LSACA+   LE G+W+H++I+R+ I     L ++++
Sbjct: 244 VLSACAKKLDLEFGRWVHAFIKRNGIRESLILDNAIL 280



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 46/152 (30%), Positives = 73/152 (48%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           SAC++      G  IH YI K G+     L  +++ MY+KCG ++ A             
Sbjct: 379 SACAQLGAIDLGGWIHVYIKKQGIKFNCHLTTALIDMYSKCGDVEKA------------- 425

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
                             LE+F  +  +DV  W+A+I  LA +    EA++ F +MQ+ K
Sbjct: 426 ------------------LEMFDSVNIRDVFVWSAMIAGLAMHGRGKEAISLFLKMQEHK 467

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIE 457
           V PN +TL++ L AC+  G +E G+ I + +E
Sbjct: 468 VKPNSVTLINVLCACSHSGLVEEGRAIFNQME 499


>gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
           small; Tetratricopeptide-like helical [Medicago
           truncatula]
          Length = 971

 Score =  137 bits (345), Expect = 1e-30
 Identities = 69/167 (41%), Positives = 102/167 (61%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           S+CS+  D   GK  H YI + G+  T+ L N+++ MY KCG +  A VLF  M+ K  +
Sbjct: 267 SSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLV 326

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT M+ GY   G    A E+ +K+P K V  WNA+I+   +     EAL  F EMQ   
Sbjct: 327 SWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRT 386

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           + P+ +T+V+ LSAC+++GAL++G WIH YIER  + ID  L ++L+
Sbjct: 387 IEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALV 433



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 45/165 (27%), Positives = 75/165 (45%)
 Frame = +2

Query: 8   CSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEITW 187
           C     SC G  + G++ K G    + + N+ + M   CG + +A  +F K  V+     
Sbjct: 168 CCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVR----- 222

Query: 188 TLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMKVT 367
                                     D+ +WN++IT   K     EA+  +KEM+  KV 
Sbjct: 223 --------------------------DLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVR 256

Query: 368 PNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           PN +T++  +S+C++V  L LGK  H YI+   +E    L+++LM
Sbjct: 257 PNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALM 301


>ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
           gi|13940614|gb|AAK50416.1|AC021891_17 Putative
           selenium-binding protein-like [Oryza sativa Japonica
           Group] gi|31431939|gb|AAP53645.1| pentatricopeptide,
           putative [Oryza sativa Japonica Group]
           gi|125574711|gb|EAZ15995.1| hypothetical protein
           OsJ_31439 [Oryza sativa Japonica Group]
           gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa
           Japonica Group]
          Length = 651

 Score =  137 bits (345), Expect = 1e-30
 Identities = 63/167 (37%), Positives = 106/167 (63%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           S C +  D   G+ +HG++   GV  T+ L+N+++ MY KCG +++A  +F+++  +  +
Sbjct: 236 SGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVV 295

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
           +WT MI G+   GL   A ++F +MP +DV  WNAL+T   +     EAL+ F EMQ+  
Sbjct: 296 SWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEAS 355

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           V P+ +T+V+ L+AC+++GALE+G W+H YIE+  +     L +SL+
Sbjct: 356 VVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLI 402



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 39/152 (25%), Positives = 69/152 (45%)
 Frame = +2

Query: 2   SACSRSLDSCNGKVIHGYICKVGVGMTLDLLNSILGMYTKCGMMDLAVVLFKKMSVKNEI 181
           +ACS+      G  +H YI K  +  ++ L  S++ MY KCG ++ A+            
Sbjct: 368 TACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAI------------ 415

Query: 182 TWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKEMQKMK 361
                               +F ++P K+  +W A+I  LA + + NEA+  F+ M ++ 
Sbjct: 416 -------------------HIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELG 456

Query: 362 VTPNCLTLVSTLSACARVGALELGKWIHSYIE 457
             P+ +T +  LSAC   G ++ G+   S +E
Sbjct: 457 QKPDEITFIGVLSACCHAGLVKEGREFFSLME 488



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
 Frame = +2

Query: 167 VKNEITWTLMIEGYVHSGLKHFALELFHKMPYKDVASWNALITALAKNNYYNEALNTFKE 346
           V N  T  L I G +       A  LF + P +D+ SWN LI    +     EAL  F  
Sbjct: 162 VVNAATHFLSIRGPMED-----ARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWR 216

Query: 347 M--QKMKVTPNCLTLVSTLSACARVGALELGKWIHSYIERSNIEIDAQLSSSLM 502
           M  +   V P+ +T+++ +S C ++  LELG+ +H +++   +    +L ++LM
Sbjct: 217 MVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALM 270