BLASTX nr result
ID: Stemona21_contig00034846
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Stemona21_contig00034846 (848 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera] 104 4e-34 emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 105 6e-34 ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252... 105 6e-34 ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854... 104 1e-33 emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 103 2e-33 ref|XP_004233808.1| PREDICTED: uncharacterized protein LOC101263... 97 2e-32 ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628... 102 2e-31 gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subc... 93 8e-30 gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s... 98 2e-29 gb|AAV59441.1| putative polyprotein [Oryza sativa Japonica Group] 91 4e-29 gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group] 90 4e-29 gb|AAT81746.1| integrase core domain containing protein [Oryza s... 93 8e-29 emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group] 96 1e-28 gb|ABB47865.2| retrotransposon protein, putative, Ty1-copia subc... 95 1e-28 gb|ABA95859.1| retrotransposon protein, putative, Ty1-copia subc... 97 4e-28 gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subc... 96 5e-28 gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subc... 96 9e-28 gb|AAP54258.2| retrotransposon protein, putative, Ty1-copia subc... 94 9e-28 gb|AAL31047.1|AC078893_10 putative polyprotein [Oryza sativa Jap... 94 9e-28 gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subc... 86 2e-27 >emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera] Length = 1316 Score = 104 bits (260), Expect(2) = 4e-34 Identities = 54/103 (52%), Positives = 73/103 (70%) Frame = -1 Query: 368 CH*GWTF*LLL*VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNL 189 C W F V + +G+S++ K+ G+ +V LKMTSGK LTL++V HVPDI KNL Sbjct: 474 CSNKWMFSTYKPVEQNEELFMGNSSSSKIEGRGKVILKMTSGKELTLNDVLHVPDICKNL 533 Query: 188 VSGSLLVQLGFKVVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 VSGSLL + GFK+V S+K V+TK +F+GKG++ DGLFK+NV Sbjct: 534 VSGSLLSKNGFKLVFVSDKFVLTKNEMFVGKGYLSDGLFKMNV 576 Score = 67.4 bits (163), Expect(2) = 4e-34 Identities = 39/135 (28%), Positives = 66/135 (48%) Frame = -2 Query: 844 EIYRS*SSLDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREI 665 EI+ S +++QVA +++KLPP W +F L+ + L +I +RIE+ +R E Sbjct: 341 EIHSEGMSFSDSFQVAAVIEKLPPLWKDFKNYLKHKRKEMNLEELIVRLRIEEDNRKSE- 399 Query: 664 NHARSSNQMKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDE 485 + +N M+AK N+ E PK K K+ +++ Q +SN + G Sbjct: 400 --KKGNNSMEAKANVIEQGPKTNKKRKHGDQNQNQ-----------ESNVAKKFKGK--- 443 Query: 484 SFCFVCGRDNHVARD 440 C+ CG+ H + D Sbjct: 444 --CYNCGKTGHKSND 456 >emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] Length = 1277 Score = 105 bits (262), Expect(2) = 6e-34 Identities = 51/91 (56%), Positives = 70/91 (76%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 + G V +G+ST ++ GQ +V LKMTSGK LTL NV +VP+IRKNLV GSLL GF+ Sbjct: 359 IENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVFGSLLNNHGFR 418 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESNKVV++K +++GKG++ DG++KLNV Sbjct: 419 LVFESNKVVLSKSGMYVGKGYMSDGMWKLNV 449 Score = 66.2 bits (160), Expect(2) = 6e-34 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 11/178 (6%) Frame = -2 Query: 844 EIYRS*SSLDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREI 665 EI+ L E +QVA +++KLPP+W +F L+ +++ +I +RIE+ +R E Sbjct: 171 EIHADGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEK 230 Query: 664 NHARSSNQMKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDE 485 A + N+ A+ N E +++KT +KG+ +K + Sbjct: 231 KGAHTLNE--AQANFVEHGQSSKAKTN---NNKGKGSKLGPKGGISKKPKFQGK------ 279 Query: 484 SFCFVCGRDNHVARDCFYRKKEKIVTKKKHDNNSK-----------SEVHVIEAGPSD 344 CF CG+ H + DC KK K DN +K SEV+++ + P + Sbjct: 280 --CFNCGKQGHKSVDCRLPKKNKPKEANVIDNITKNVSDIDLTTVVSEVNLVGSNPKE 335 >ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera] Length = 946 Score = 105 bits (263), Expect(2) = 6e-34 Identities = 51/91 (56%), Positives = 70/91 (76%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 + G V +G+ST ++ GQ +V LKMTSGK LTL NV +VP+IRKNLVSGSLL GF+ Sbjct: 359 IENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFR 418 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESNK V++K +++GKG++ DG++KLNV Sbjct: 419 LVFESNKFVLSKSGMYVGKGYMSDGMWKLNV 449 Score = 65.9 bits (159), Expect(2) = 6e-34 Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 11/178 (6%) Frame = -2 Query: 844 EIYRS*SSLDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREI 665 EI+ L E +QVA +++KLPP+W +F L+ +++ +I +RIE+ +R E Sbjct: 171 EIHAEGMMLSETFQVAAIIEKLPPAWKDFKNCLKHKRKEMSIEDLIIRLRIEEDNRRSEK 230 Query: 664 NHARSSNQMKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDE 485 + N+ AK N E +++KT +KG+ +K + Sbjct: 231 KGVHTLNE--AKANFVEHGQSSKAKTN---NNKGKGSKLGPKGGISKKPKFQGK------ 279 Query: 484 SFCFVCGRDNHVARDCFYRKKEKIVTKKKHDNNSK-----------SEVHVIEAGPSD 344 CF CG+ H + DC KK K DN +K SEV+++ + P + Sbjct: 280 --CFNCGKQGHKSVDCRLPKKNKPKEANVIDNITKNVSNIDLTAVVSEVNLVGSNPKE 335 >ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis vinifera] Length = 478 Score = 104 bits (260), Expect(2) = 1e-33 Identities = 50/91 (54%), Positives = 70/91 (76%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 + G V +G+S ++ GQ +V LKMTSGK LTL NV +VP+IRKNLVSGSLL GF+ Sbjct: 359 IENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFR 418 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V +SNKVV++K +++GKG++ DG++KLNV Sbjct: 419 LVFDSNKVVLSKSGMYVGKGYMSDGMWKLNV 449 Score = 66.2 bits (160), Expect(2) = 1e-33 Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 11/178 (6%) Frame = -2 Query: 844 EIYRS*SSLDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREI 665 EI+ L E +QVA +++KLPP+W +F L+ +++ +I +RIE+ +R E Sbjct: 171 EIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEK 230 Query: 664 NHARSSNQMKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDE 485 A + N+ AK N E + +KT +KG+ +K + Sbjct: 231 KGAHTLNE--AKANFVEHGQSSNAKTN---NNKGKGSKLGPKGGISKKPKFQGK------ 279 Query: 484 SFCFVCGRDNHVARDCFYRKKEK--------IVTKKKHD---NNSKSEVHVIEAGPSD 344 CF CG+ H + DC KK K +TK +D SEV+++ + P + Sbjct: 280 --CFNCGKQGHKSVDCRLPKKNKPKEANVIDDITKNVYDIDLTTVVSEVNLVGSNPKE 335 >emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] Length = 1316 Score = 103 bits (257), Expect(2) = 2e-33 Identities = 50/91 (54%), Positives = 69/91 (75%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 + G V +G+S ++ GQ +V LKMTSGK LTL NV +VP+IRKNLVSGSLL GF+ Sbjct: 359 IENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFR 418 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V SNKVV++K +++GKG++ DG++KLNV Sbjct: 419 LVFXSNKVVLSKSGMYVGKGYMSDGMWKLNV 449 Score = 66.6 bits (161), Expect(2) = 2e-33 Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 11/178 (6%) Frame = -2 Query: 844 EIYRS*SSLDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREI 665 EI+ L E +QVA +++KLPP+W +F L+ +++ +I +RIE+ +R E Sbjct: 171 EIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEK 230 Query: 664 NHARSSNQMKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDE 485 A + N+ AK N E +++KT +KG+ +K + Sbjct: 231 KGAHTLNE--AKANFVEHGQSSKAKTN---NNKGKGSKLGPKGGISKKPKFQGK------ 279 Query: 484 SFCFVCGRDNHVARDCFYRKKEK--------IVTKKKHDNNSK---SEVHVIEAGPSD 344 CF CG+ H + DC KK K +TK +D + SEV+++ + P + Sbjct: 280 --CFNCGKQGHKSVDCRLPKKNKPKEANVIDDITKNVYDIDLTAVVSEVNLVGSNPKE 335 >ref|XP_004233808.1| PREDICTED: uncharacterized protein LOC101263787 [Solanum lycopersicum] Length = 2703 Score = 96.7 bits (239), Expect(2) = 2e-32 Identities = 44/91 (48%), Positives = 70/91 (76%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 V G + + +G+S++ KV+G+ V+LK TS K +TL +V HVPDIRKNLVSG+LL + GFK Sbjct: 1069 VGGDKVLHMGNSSSAKVVGKGTVELKFTSEKMVTLIDVLHVPDIRKNLVSGTLLSKHGFK 1128 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 ++ E++K +++K +F+G G+ +G+FKLN+ Sbjct: 1129 MIFEADKFILSKQGMFVGNGYATNGMFKLNI 1159 Score = 69.7 bits (169), Expect(2) = 2e-32 Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 1/152 (0%) Frame = -2 Query: 823 SLDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREINHARSSN 644 +LDEN+ V ++ KLPPSW + L LTL ++Q ++IE + R R+ N R Sbjct: 898 ALDENFHVGAIVSKLPPSWKEYRSKLLHKKEDLTLEQLLQHLQIEQETRYRDNNILREP- 956 Query: 643 QMKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDESF-CFVC 467 MKA V + E K + K+ KAK + + + +N +S C+ C Sbjct: 957 IMKAHV-VEEKIKKEPANNKF---------------LKAKKSKNFKRTNSNSKSIKCYHC 1000 Query: 466 GRDNHVARDCFYRKKEKIVTKKKHDNNSKSEV 371 + H ARDC K EK K+K +NN+K+E+ Sbjct: 1001 HKIGHYARDCKILKAEK--KKEKANNNTKNEL 1030 >ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628178 [Citrus sinensis] Length = 2248 Score = 102 bits (255), Expect(2) = 2e-31 Identities = 51/91 (56%), Positives = 71/91 (78%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 VS G + +G+S ++ GQ V LKMTSGK LTL++V +V +IRKNLVSGSLL + GF+ Sbjct: 1283 VSNGEKLFMGNSAMSEIEGQGNVILKMTSGKELTLNDVLYVLEIRKNLVSGSLLNKHGFQ 1342 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESN+VV++K +++GKG+V DGLFKLN+ Sbjct: 1343 MVFESNRVVLSKNGMYVGKGYVNDGLFKLNI 1373 Score = 60.5 bits (145), Expect(2) = 2e-31 Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 9/168 (5%) Frame = -2 Query: 820 LDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREINHARSSNQ 641 L E +QVA +++KLPP+W +F L+ + + ++ +RIE+ +R N R Sbjct: 1114 LSETFQVAAIIEKLPPTWKDFKSYLKHKCKEMNIEELVVKLRIEEDNR----NAERIGAI 1169 Query: 640 MKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDESFCFVCGR 461 AK N+ E +PKN+ K PK S+ N + F C + Sbjct: 1170 SMAKANVVEHRPKNKKNKKLGPKG------------------GISKKQTNFQGKYFNCDK 1211 Query: 460 DNHVARDCFYRKKEK------IVTKKKHDNNSK---SEVHVIEAGPSD 344 H DC KK++ +T+ D N SEV+++ + P + Sbjct: 1212 MGHKVSDCRLPKKKREENVVENITQHVSDINLSAVVSEVNLVGSNPRE 1259 >gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1212 Score = 93.2 bits (230), Expect(2) = 8e-30 Identities = 49/91 (53%), Positives = 63/91 (69%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 V+ G +V +G+ + V G VDLK TSGK + L NVQHVP I +NLVSGS L + GFK Sbjct: 308 VARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK 367 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESNKVVI+K FIGKG+ GLF+ ++ Sbjct: 368 LVFESNKVVISKHGYFIGKGYECGGLFRFSL 398 Score = 64.7 bits (156), Expect(2) = 8e-30 Identities = 39/140 (27%), Positives = 65/140 (46%) Frame = -2 Query: 814 ENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREINHARSSNQMK 635 + + C++ KLPPSW F L+ ++ +I S+ +E++ R ++ Q Sbjct: 143 DKFVAGCIIAKLPPSWRGFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSN 202 Query: 634 AKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDESFCFVCGRDN 455 A V + +N+SK KY+ + K +N+ P N DE CFVCG+ Sbjct: 203 ANV---VHKAQNKSKGKYKAQQTTNFK---------KQKKNNNNP-NQDERTCFVCGQPG 249 Query: 454 HVARDCFYRKKEKIVTKKKH 395 H+AR C RK K ++ + Sbjct: 250 HLARKCPQRKGMKAPARQTY 269 >gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo] Length = 1038 Score = 97.8 bits (242), Expect(2) = 2e-29 Identities = 48/87 (55%), Positives = 66/87 (75%) Frame = -1 Query: 323 GRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFKVVL 144 G V +G+S V+G+ +V LK+TSGKTL+L NV +VP +R+NLVSGSLL + G K+VL Sbjct: 361 GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVL 420 Query: 143 ESNKVVITKGSLFIGKGFVYDGLFKLN 63 E +KVV+TK F+GKG++ +GLF LN Sbjct: 421 EGDKVVLTKNGNFVGKGYLSNGLFVLN 447 Score = 58.9 bits (141), Expect(2) = 2e-29 Identities = 42/153 (27%), Positives = 72/153 (47%) Frame = -2 Query: 814 ENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREINHARSSNQMK 635 E Q LL+K PPSW+++ +L+ L L +I +R E+ +RL++ +++ N + Sbjct: 179 EILQANVLLEKFPPSWNDYRNHLKHKKKDLKLHELISHMRTEEANRLKDKLASQNLNSVN 238 Query: 634 AKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDESFCFVCGRDN 455 A NL ES NR +TK + KG+ K + T+ Q + C+VC ++ Sbjct: 239 A--NLVESSFVNRDRTKQEKGHKGK------NSEKRQFKTTGGQI-KKKKLVCYVCRKEG 289 Query: 454 HVARDCFYRKKEKIVTKKKHDNNSKSEVHVIEA 356 H + C RK N ++ + +I A Sbjct: 290 HKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAA 322 >gb|AAV59441.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1225 Score = 90.5 bits (223), Expect(2) = 4e-29 Identities = 47/91 (51%), Positives = 62/91 (68%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 V+ G +V +G+ + V G VDL TSGK + L NVQHVP I +NLVSGS L + GFK Sbjct: 300 VARGSTVLMGNGSHASVHGVGMVDLMFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK 359 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESNKVV++K FIGKG+ GLF+ ++ Sbjct: 360 LVFESNKVVVSKHGYFIGKGYECGGLFRFSL 390 Score = 65.1 bits (157), Expect(2) = 4e-29 Identities = 39/135 (28%), Positives = 62/135 (45%) Frame = -2 Query: 820 LDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREINHARSSNQ 641 L + + C++ KLPPSW +F L+ ++ +I S+ +E++ R ++ Q Sbjct: 141 LPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQ 200 Query: 640 MKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDESFCFVCGR 461 A V + +N+SK KY+ + K N+ N DE CFVCG+ Sbjct: 201 SSANV---VHKAQNKSKGKYKAQQTTNF----------KKQKKNNNNPNQDERTCFVCGQ 247 Query: 460 DNHVARDCFYRKKEK 416 H+AR C RK K Sbjct: 248 VGHLARKCPQRKGMK 262 >gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1109 Score = 90.1 bits (222), Expect(2) = 4e-29 Identities = 47/84 (55%), Positives = 58/84 (69%) Frame = -1 Query: 323 GRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFKVVL 144 G +V +G+ + V G VDLK TSGK + L NVQHVP I +NLVSGS L + GFK+V Sbjct: 289 GSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTKDGFKLVF 348 Query: 143 ESNKVVITKGSLFIGKGFVYDGLF 72 ESNKVV++K FIGKG+ GLF Sbjct: 349 ESNKVVVSKHGYFIGKGYECGGLF 372 Score = 65.5 bits (158), Expect(2) = 4e-29 Identities = 38/131 (29%), Positives = 59/131 (45%) Frame = -2 Query: 820 LDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREINHARSSNQ 641 L + + C++ KLPPSW +F L+ ++ +I S+ IE++ R ++ Q Sbjct: 141 LPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSIEGLIASLDIEEKAREKDAASKGDGGQ 200 Query: 640 MKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDESFCFVCGR 461 A V + N+SK KY+ + K N+ N DE CFVCG+ Sbjct: 201 SSANV---VHKAHNKSKGKYKAQQTTNF----------KKQKKNNNNPNQDEGTCFVCGQ 247 Query: 460 DNHVARDCFYR 428 H+AR C R Sbjct: 248 PGHLARKCLQR 258 >gb|AAT81746.1| integrase core domain containing protein [Oryza sativa Japonica Group] gi|108708962|gb|ABF96757.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1232 Score = 93.2 bits (230), Expect(2) = 8e-29 Identities = 47/91 (51%), Positives = 65/91 (71%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 V G S+++G+ + V G VDLK+TSGKT+ L NVQHV I+KNLVSGSLL + GF+ Sbjct: 391 VGRGSSLSMGNGSLAAVHGVGMVDLKLTSGKTVQLKNVQHVLSIKKNLVSGSLLCREGFR 450 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESNK V++K F+GKG+ GLF+ ++ Sbjct: 451 LVFESNKCVVSKYGTFVGKGYDRGGLFRFSL 481 Score = 61.2 bits (147), Expect(2) = 8e-29 Identities = 36/144 (25%), Positives = 66/144 (45%) Frame = -2 Query: 847 QEIYRS*SSLDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLRE 668 +E+ + L + + ++ KLPPSWS+FA +L+ ++ +I S+ +E++ R ++ Sbjct: 218 KELENNNCELSDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVSDLIGSLGVEEKARAKD 277 Query: 667 INHARSSNQMKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNND 488 H + A + ++ + + K +P K + K K+N Sbjct: 278 NRHKKVEGGSSANMVQKKNPHASHNNKKVKPDGKPKATTNFKKKGKGKANGD-------- 329 Query: 487 ESFCFVCGRDNHVARDCFYRKKEK 416 CFVCG+ H A+DC RK K Sbjct: 330 ---CFVCGKSGHWAKDCPKRKDRK 350 >emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group] Length = 1321 Score = 95.5 bits (236), Expect(2) = 1e-28 Identities = 48/91 (52%), Positives = 64/91 (70%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 V G S+ +G+ + V G VDLK TSGKT+ L NVQHVP I+KNLVSGSLL + GF+ Sbjct: 340 VGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFR 399 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESNK V++K F+GKG+ GLF+ ++ Sbjct: 400 LVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 430 Score = 58.5 bits (140), Expect(2) = 1e-28 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 4/148 (2%) Frame = -2 Query: 847 QEIYRS*SSLDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLRE 668 +E+ + L + + ++ KLPPSWS+FA +L+ ++ +I S+ +E++ R ++ Sbjct: 167 KELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSLGVEEKARAKD 226 Query: 667 INHAR----SSNQMKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQP 500 + + SS M K N S + K +PK A +N Sbjct: 227 VRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPK--------------AATNFKKKSK 272 Query: 499 GNNDESFCFVCGRDNHVARDCFYRKKEK 416 G + CFVCG+ H A+DC RK K Sbjct: 273 G-KAKGDCFVCGKSGHWAKDCPERKDRK 299 >gb|ABB47865.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1126 Score = 95.1 bits (235), Expect(2) = 1e-28 Identities = 48/91 (52%), Positives = 64/91 (70%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 V G S+ +G+ + V G VDLK TSGKT+ L NVQHVP I+KNLVSGSLL + GF+ Sbjct: 275 VRRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFR 334 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESNK V++K F+GKG+ GLF+ ++ Sbjct: 335 LVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 365 Score = 58.9 bits (141), Expect(2) = 1e-28 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 4/148 (2%) Frame = -2 Query: 847 QEIYRS*SSLDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLRE 668 +E+ + L + + ++ KLPPSWS+FA +L+ ++ +I S+ +E++ R ++ Sbjct: 102 KELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHNRQEFSVPDLIGSLGVEEKARAKD 161 Query: 667 INHAR----SSNQMKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQP 500 + + SS M K N S + K +PK A +N Sbjct: 162 VQGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPK--------------AATNFKKKSK 207 Query: 499 GNNDESFCFVCGRDNHVARDCFYRKKEK 416 G + CFVCG+ H A+DC RK K Sbjct: 208 G-KAKGDCFVCGKSGHWAKDCPERKDRK 234 >gb|ABA95859.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 503 Score = 97.4 bits (241), Expect(2) = 4e-28 Identities = 50/91 (54%), Positives = 64/91 (70%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 V G S+ +G+ + V G VDLK TSGKT+ L NVQHVP I+KNLVSGSLL + GFK Sbjct: 336 VGRGSSLLMGNGSLAAVHGVSMVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFK 395 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESNK V++K FIGKG+ GLF+ ++ Sbjct: 396 LVFESNKCVVSKYGTFIGKGYDSGGLFRFSL 426 Score = 54.7 bits (130), Expect(2) = 4e-28 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 6/150 (4%) Frame = -2 Query: 847 QEIYRS*SSLDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLRE 668 +E+ + L + + ++ KLPPSWS+FA +L+ ++ +I S+ +E++ R ++ Sbjct: 174 KELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVIDLIGSLGVEEKARAKD 233 Query: 667 I------NHARSSNQMKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNS 506 I N S N K K ++ K ++ T ++ K KG+ AK + Sbjct: 234 IWGKKKKNPHASHNNKKVKHDV-----KPKATTNFKKKGKGK----------AKGD---- 274 Query: 505 QPGNNDESFCFVCGRDNHVARDCFYRKKEK 416 CFVCG+ H A+DC K K Sbjct: 275 ---------CFVCGKPGHWAKDCPEHKDRK 295 >gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1186 Score = 95.5 bits (236), Expect(2) = 5e-28 Identities = 48/91 (52%), Positives = 64/91 (70%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 V G S+ +G+ + V G VDLK TSGKT+ L NVQHVP I+KNLVSGSLL + GF+ Sbjct: 463 VGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFR 522 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESNK V++K F+GKG+ GLF+ ++ Sbjct: 523 LVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 553 Score = 56.2 bits (134), Expect(2) = 5e-28 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 4/148 (2%) Frame = -2 Query: 847 QEIYRS*SSLDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLRE 668 +E+ + L + + ++ KLPPSWS+FA +L+ ++ +I S+ +E++ R ++ Sbjct: 290 KELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSLGVEEKARAKD 349 Query: 667 INHAR----SSNQMKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQP 500 + + SS M K N S + K +PK +N Sbjct: 350 VRGKKVEGGSSANMVQKKNPHASHNNKKVKPDVKPK--------------VATNFKKKGK 395 Query: 499 GNNDESFCFVCGRDNHVARDCFYRKKEK 416 G + CFVCG+ H A+DC RK K Sbjct: 396 G-KAKGDCFVCGKSGHWAKDCPERKDRK 422 >gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1357 Score = 95.5 bits (236), Expect(2) = 9e-28 Identities = 48/91 (52%), Positives = 64/91 (70%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 V G S+ +G+ + V G VDLK TSGKT+ L NVQHVP I+KNLVSGSLL + GF+ Sbjct: 376 VGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFR 435 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESNK V++K F+GKG+ GLF+ ++ Sbjct: 436 LVFESNKCVVSKYGTFVGKGYDSGGLFRFSL 466 Score = 55.5 bits (132), Expect(2) = 9e-28 Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 4/139 (2%) Frame = -2 Query: 820 LDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREINHAR---- 653 + + + ++ KLPPSWS+FA +L+ ++ +I S+ +E++ R ++ + Sbjct: 212 MPDKFVAGGIIAKLPPSWSDFATSLKHKRQEFSVPDLIGSLGVEEKARANDVRGKKVEGG 271 Query: 652 SSNQMKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDESFCF 473 SS M K N S + K +PK A +N G + CF Sbjct: 272 SSANMVQKKNPHASHNNKKVKPDVKPK--------------AATNFKKKGKG-KAKGDCF 316 Query: 472 VCGRDNHVARDCFYRKKEK 416 VCG+ H A+DC RK K Sbjct: 317 VCGKSGHWAKDCPERKDRK 335 >gb|AAP54258.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 879 Score = 94.0 bits (232), Expect(2) = 9e-28 Identities = 49/91 (53%), Positives = 63/91 (69%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 VS G +V +G+ + V G VDLK TSGK + L NVQHVP I +NLVSGS L + GFK Sbjct: 249 VSRGSTVLMGNGSHASVHGVGMVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK 308 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESNKVV++K FIGKG+ GLF+ ++ Sbjct: 309 LVFESNKVVVSKHGYFIGKGYECGGLFRFSL 339 Score = 57.0 bits (136), Expect(2) = 9e-28 Identities = 37/128 (28%), Positives = 60/128 (46%) Frame = -2 Query: 820 LDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREINHARSSNQ 641 L + + C++ KLPPSW F L+ ++ +I S+ +E++ R +++ Q Sbjct: 110 LPDKFVDGCIIAKLPPSWRGFGTALKHKRQEYSVEGLIASLDVEEKAREKDVAFKGDGGQ 169 Query: 640 MKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDESFCFVCGR 461 A V T +N+SK KY+ + K +N+ P N DE CFVC + Sbjct: 170 STANVVHT---AQNKSKGKYKAQQTTNF----------KKKNNNNNP-NQDERTCFVC-Q 214 Query: 460 DNHVARDC 437 H+AR C Sbjct: 215 PGHLARKC 222 >gb|AAL31047.1|AC078893_10 putative polyprotein [Oryza sativa Japonica Group] Length = 866 Score = 94.0 bits (232), Expect(2) = 9e-28 Identities = 49/91 (53%), Positives = 63/91 (69%) Frame = -1 Query: 332 VSGGRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFK 153 VS G +V +G+ + V G VDLK TSGK + L NVQHVP I +NLVSGS L + GFK Sbjct: 251 VSRGSTVLMGNGSHASVHGVGMVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK 310 Query: 152 VVLESNKVVITKGSLFIGKGFVYDGLFKLNV 60 +V ESNKVV++K FIGKG+ GLF+ ++ Sbjct: 311 LVFESNKVVVSKHGYFIGKGYECGGLFRFSL 341 Score = 57.0 bits (136), Expect(2) = 9e-28 Identities = 37/128 (28%), Positives = 60/128 (46%) Frame = -2 Query: 820 LDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREINHARSSNQ 641 L + + C++ KLPPSW F L+ ++ +I S+ +E++ R +++ Q Sbjct: 110 LPDKFVDGCIIAKLPPSWRGFGTALKHKRQEYSVEGLIASLDVEEKAREKDVAFKGDGGQ 169 Query: 640 MKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDESFCFVCGR 461 A V T +N+SK KY+ + K +N+ P N DE CFVC + Sbjct: 170 STANVVHT---AQNKSKGKYKAQQTTNF----------KKKNNNNNP-NQDERTCFVC-Q 214 Query: 460 DNHVARDC 437 H+AR C Sbjct: 215 PGHLARKC 222 >gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1284 Score = 86.3 bits (212), Expect(2) = 2e-27 Identities = 45/88 (51%), Positives = 60/88 (68%) Frame = -1 Query: 323 GRSVTVGDSTAVKVLGQDRVDLKMTSGKTLTLHNVQHVPDIRKNLVSGSLLVQLGFKVVL 144 G +V +G+ + V G V LK TSGK + L NVQHVP I +NLVSGS L++ FK+V Sbjct: 262 GSTVLMGNGSHASVHGVGTVYLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLIRDRFKLVF 321 Query: 143 ESNKVVITKGSLFIGKGFVYDGLFKLNV 60 ESNKVV++K FIGKG+ GLF+ ++ Sbjct: 322 ESNKVVVSKHGYFIGKGYECGGLFRFSL 349 Score = 63.9 bits (154), Expect(2) = 2e-27 Identities = 40/135 (29%), Positives = 64/135 (47%) Frame = -2 Query: 820 LDENYQVACLLDKLPPSWSNFAKNLRGTHGALTLRHVIQSIRIEDQHRLREINHARSSNQ 641 L + + V C++ KLPPSW +F L+ ++ +I + +E++ R ++ Q Sbjct: 126 LPDKFVVGCIIAKLPPSWRSFGTVLKHKRQEYSVEGLIAPLDVEEKAREKDAASKGDGGQ 185 Query: 640 MKAKVNLTESQPKNRSKTKYQPKSKGQXXXXXXXXXKAKSNTSNSQPGNNDESFCFVCGR 461 A V + +N+SK KY+ + K +N+ P N DE CFVCG+ Sbjct: 186 SSANVM---HKAQNKSKGKYKAQQTTNLK---------KQKKNNNNP-NQDERTCFVCGQ 232 Query: 460 DNHVARDCFYRKKEK 416 H+AR C RK K Sbjct: 233 LGHLARKCPQRKGMK 247