BLASTX nr result

ID: Stemona21_contig00034830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00034830
         (457 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   3e-07
ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   3e-07
ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|5...    59   9e-07
gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides]       59   9e-07
ref|XP_004302309.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   4e-06
gb|EMJ09551.1| hypothetical protein PRUPE_ppa001778mg [Prunus pe...    56   4e-06
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   4e-06
ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   6e-06
ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ...    55   7e-06
ref|XP_004981197.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    55   1e-05

>ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Solanum tuberosum]
          Length = 744

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = -2

Query: 90  RNRSFGGACFNCGKSGHRASECPNKKYY 7
           R+RSFGGACFNCG+SGHRASECPNK+ Y
Sbjct: 717 RDRSFGGACFNCGRSGHRASECPNKRDY 744


>ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Solanum lycopersicum]
          Length = 746

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = -2

Query: 90  RNRSFGGACFNCGKSGHRASECPNKKYY 7
           R+RSFGGACFNCG+SGHRASECPNK+ Y
Sbjct: 719 RDRSFGGACFNCGRSGHRASECPNKRDY 746


>ref|XP_002330044.1| predicted protein [Populus trichocarpa]
           gi|566168507|ref|XP_006382239.1| hypothetical protein
           POPTR_0005s00240g [Populus trichocarpa]
           gi|550337590|gb|ERP60036.1| hypothetical protein
           POPTR_0005s00240g [Populus trichocarpa]
          Length = 775

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = -2

Query: 90  RNRSFGGACFNCGKSGHRASECPNKK 13
           R+RSFGG+CFNCG+SGHRASECPNKK
Sbjct: 748 RDRSFGGSCFNCGRSGHRASECPNKK 773


>gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 481

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = -2

Query: 90  RNRSFGGACFNCGKSGHRASECPNKK 13
           R+RSFGG+CFNCG+SGHRASECPNKK
Sbjct: 454 RDRSFGGSCFNCGRSGHRASECPNKK 479


>ref|XP_004302309.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 772

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 22/26 (84%), Positives = 26/26 (100%)
 Frame = -2

Query: 90  RNRSFGGACFNCGKSGHRASECPNKK 13
           R+RSFGG+CFNCG+SGHRASECP+KK
Sbjct: 744 RDRSFGGSCFNCGQSGHRASECPSKK 769


>gb|EMJ09551.1| hypothetical protein PRUPE_ppa001778mg [Prunus persica]
          Length = 766

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -2

Query: 90  RNRSFGGACFNCGKSGHRASECPNKKYY 7
           R+RSFGG+CFNCG+SGHRASECP K+ Y
Sbjct: 739 RDRSFGGSCFNCGRSGHRASECPTKQGY 766


>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
           protein product [Vitis vinifera]
          Length = 764

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -2

Query: 90  RNRSFGGACFNCGKSGHRASECPNKKYY 7
           R RSFGG+CF CG+SGHRASECPNK+ Y
Sbjct: 737 RERSFGGSCFTCGRSGHRASECPNKRDY 764


>ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 766

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/24 (91%), Positives = 24/24 (100%)
 Frame = -2

Query: 90  RNRSFGGACFNCGKSGHRASECPN 19
           R+RSFGGACFNCG+SGHRASECPN
Sbjct: 743 RDRSFGGACFNCGRSGHRASECPN 766


>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 772

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 21/25 (84%), Positives = 25/25 (100%)
 Frame = -2

Query: 90  RNRSFGGACFNCGKSGHRASECPNK 16
           R+RSFGG+CFNCG+SGHRAS+CPNK
Sbjct: 745 RDRSFGGSCFNCGRSGHRASDCPNK 769


>ref|XP_004981197.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Setaria italica]
          Length = 759

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/32 (68%), Positives = 27/32 (84%)
 Frame = -2

Query: 111 TNIAARLRNRSFGGACFNCGKSGHRASECPNK 16
           ++  AR  NR+F GACFNCG+SGHRAS+CPNK
Sbjct: 728 SSFGARDSNRNFSGACFNCGESGHRASDCPNK 759


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