BLASTX nr result
ID: Stemona21_contig00032512
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00032512
(559 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat... 236 4e-60
ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat... 233 2e-59
gb|EMJ05692.1| hypothetical protein PRUPE_ppa019635mg [Prunus pe... 233 2e-59
ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citr... 232 4e-59
gb|EOY08539.1| Pentatricopeptide repeat (PPR) superfamily protei... 224 1e-56
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,... 223 2e-56
gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis] 219 4e-55
ref|XP_002308333.2| pentatricopeptide repeat-containing family p... 219 5e-55
ref|XP_002333469.1| predicted protein [Populus trichocarpa] 219 5e-55
ref|XP_006826424.1| hypothetical protein AMTR_s00004p00162290 [A... 213 3e-53
ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutr... 211 1e-52
ref|XP_006348568.1| PREDICTED: putative pentatricopeptide repeat... 207 1e-51
ref|XP_002871218.1| pentatricopeptide repeat-containing protein ... 207 1e-51
ref|NP_196258.1| pentatricopeptide repeat-containing protein [Ar... 206 3e-51
ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat... 205 7e-51
ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat... 203 2e-50
ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat... 203 2e-50
ref|XP_006286714.1| hypothetical protein CARUB_v10002874mg [Caps... 199 3e-49
ref|XP_004971739.1| PREDICTED: putative pentatricopeptide repeat... 199 5e-49
ref|NP_001066728.1| Os12g0456100 [Oryza sativa Japonica Group] g... 195 6e-48
>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Vitis vinifera]
Length = 1048
Score = 236 bits (601), Expect = 4e-60
Identities = 112/186 (60%), Positives = 144/186 (77%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
+LE+ G +F E+VEKVLKRCFKV HLALRFF WV R G HTT TYN M+YIAGEA+E
Sbjct: 161 KLEKSGFVFDSEVVEKVLKRCFKVPHLALRFFNWVKFRNGGCHTTRTYNTMLYIAGEAKE 220
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
L+EKL+GEM+ + C +++KTWTILISHYGKA IGKAL E M KSG +PD Y++
Sbjct: 221 FGLVEKLIGEMEEKGCKRDIKTWTILISHYGKAKLIGKALLILEKMWKSGCEPDVAAYMI 280
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
L+R+LCNA KA++ALEFYKE+V K + ++ +LYELLL CLA SGD ++LV DDM++ +
Sbjct: 281 LIRSLCNAQKADIALEFYKEMVQKEMGLDMSLYELLLTCLAGSGDIAGVQLVADDMIRRS 340
Query: 542 QIPQSE 559
QIP+ +
Sbjct: 341 QIPERD 346
Score = 98.2 bits (243), Expect = 1e-18
Identities = 60/180 (33%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ + F+ ++V ++L+ C GH AL FF WV R G+ HTTETYN I I+G ++
Sbjct: 654 LEKCTVQFTSQLVVEILRSCSLHGHAALLFFSWVGKRDGYSHTTETYNMGIKISGCSKNF 713
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM + TWTI+I YG+AG AL F MK + P+ Y L
Sbjct: 714 RSMRNLFFEMRRKGHPVTPDTWTIMIMQYGRAGLTEIALRNFAEMKANDCKPNGSTYKYL 773
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
+ LC K + A++ + E++ + L E L CL G R + + K+
Sbjct: 774 IICLCGRKGRKVDEAIKTFLEMIRAGYVPDKELVESYLKCLCEVGKLLDARRCTEALCKL 833
>ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Citrus sinensis]
Length = 1040
Score = 233 bits (595), Expect = 2e-59
Identities = 110/186 (59%), Positives = 144/186 (77%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RLE L F PE+V+KVLKRCFKV HLALRFF WV LR GF HTTETYN M+ IAGEA+E
Sbjct: 151 RLENLSFRFEPEVVDKVLKRCFKVPHLALRFFNWVKLREGFCHTTETYNTMLTIAGEAKE 210
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
L+L+E+L EM+ SC KN+KTWTIL+S YGKA IGKAL FE M+K G +PD Y V
Sbjct: 211 LELLEELEREMEINSCEKNIKTWTILVSLYGKAKLIGKALLVFEKMRKYGFEPDAVAYKV 270
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
L+R+LCNAGK ++ALEFYKE+ K + ++ +LY+++++C A+ GD +A+ + DDMV+I+
Sbjct: 271 LVRSLCNAGKGDIALEFYKEMAQKEMVLDLSLYKIVMNCAAKLGDVDAVLSIADDMVRIS 330
Query: 542 QIPQSE 559
QIP+ +
Sbjct: 331 QIPERD 336
Score = 93.6 bits (231), Expect = 3e-17
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ + F+PE+V ++L G AL FF WV + + H++ TYN I IAG ++
Sbjct: 644 LEKCAVQFTPELVLEILHNSEMHGSAALHFFSWVGKQADYSHSSATYNMAIKIAGRGKDF 703
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM TWTI++ YG+AG A+ FE MK + +P Y L
Sbjct: 704 KHMRNLFYEMRRNGYLITPDTWTIMMMQYGRAGLTEMAMRVFEDMKANDCNPSGSTYKYL 763
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
+ +L K + A++ ++E+V + L E+ LDCL G + + D + K+
Sbjct: 764 IISLSGRKGRKVDHAIKIFQEMVNAGHIPDKELVEIYLDCLCEVGMLQLAKSCMDVLRKV 823
>gb|EMJ05692.1| hypothetical protein PRUPE_ppa019635mg [Prunus persica]
Length = 893
Score = 233 bits (594), Expect = 2e-59
Identities = 111/183 (60%), Positives = 145/183 (79%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE +G EIV+KVLKRCFKV HLALRFF WV L+ GF HTTETYN M++IAGEA+E
Sbjct: 5 LENMGFQLDSEIVDKVLKRCFKVPHLALRFFNWVKLKEGFRHTTETYNTMLFIAGEAKEF 64
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
++EKLV EM+ SC K+VKTWTILIS YGKA IGKAL +E M+K G +PD VY ++
Sbjct: 65 AMVEKLVDEMEKNSCQKDVKTWTILISQYGKAKLIGKALLVYEEMRKCGYEPDAVVYRLM 124
Query: 365 LRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIAQ 544
+R LC AGK+++A+EFYKE+V K+I ++ NLY+LLL+ +ARSG+T A+ LV DDM++++Q
Sbjct: 125 IRALCAAGKSDVAMEFYKEMVKKDIGLDTNLYKLLLNGIARSGETGAVALVSDDMIRVSQ 184
Query: 545 IPQ 553
IP+
Sbjct: 185 IPE 187
Score = 101 bits (251), Expect = 1e-19
Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE + F+P +V ++L+ G +AL+FF WV + G++ TTETYN I IAG ++
Sbjct: 498 LENSSVDFTPGLVLEILRSSSMHGLVALQFFAWVGKQTGYNQTTETYNMAIKIAGRGKDF 557
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM + + TWTI+I YG+ G AL FE MK + P Y L
Sbjct: 558 KHMRSLFYEMRRKGFSITADTWTIMIMQYGRTGLTEIALQIFEEMKSNNYSPTGSTYKYL 617
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGD-TEALRLVE 520
+ +LC KA+ A+ ++E++ N + L E L CL G+ ++A R ++
Sbjct: 618 IISLCGRKGRKADEAIRIFQEMIRANHVPDKELVESYLGCLCEVGELSDARRCID 672
>ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citrus clementina]
gi|557532087|gb|ESR43270.1| hypothetical protein
CICLE_v10010964mg [Citrus clementina]
Length = 1040
Score = 232 bits (592), Expect = 4e-59
Identities = 109/186 (58%), Positives = 143/186 (76%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RLE L F PE+V+KVLKRCFKV HLALRFF WV LR GF H TETYN M+ IAGEA+E
Sbjct: 151 RLENLSFRFEPEVVDKVLKRCFKVPHLALRFFNWVKLREGFCHATETYNTMLTIAGEAKE 210
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
L+L+E+L EM+ SC KN+KTWTIL+S YGKA IGKAL FE M+K G +PD Y V
Sbjct: 211 LELLEELEREMEINSCAKNIKTWTILVSLYGKAKLIGKALLVFEKMRKCGFEPDAVAYKV 270
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
L+R+LCNAGK ++ALEFYKE+ K + ++ +LY+++++C A+ GD +A+ + DDMV+I+
Sbjct: 271 LVRSLCNAGKGDIALEFYKEMAQKEMVLDLSLYKIVMNCAAKLGDVDAVLSIADDMVRIS 330
Query: 542 QIPQSE 559
QIP+ +
Sbjct: 331 QIPERD 336
Score = 94.0 bits (232), Expect = 2e-17
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ + ++PE+V ++L G AL FF WV + + H++ TYN I IAG ++
Sbjct: 644 LEKCAVQYTPELVLEILHNSEMHGSAALHFFSWVGKQADYSHSSATYNMAIKIAGRGKDF 703
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM TWTI++ YG+AG A+ FE MK +G +P Y L
Sbjct: 704 KHMRNLFYEMRRNGYLITPDTWTIMMMQYGRAGLTEMAMRVFEDMKANGCNPSGSTYKYL 763
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
+ +L K + A++ ++E+V + L E LDCL G + + D + K+
Sbjct: 764 IISLSGRKGRKVDHAIKIFQEMVNAGHIPDKELVETYLDCLCEVGMLQLAKSCMDVLRKV 823
>gb|EOY08539.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 1050
Score = 224 bits (570), Expect = 1e-56
Identities = 105/186 (56%), Positives = 143/186 (76%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
+LE+ G F PEIVEKVLKRCFKV HLA RFF WV LR GF HTT T+N M+YIAGEA+E
Sbjct: 162 QLEKSGFSFEPEIVEKVLKRCFKVPHLAFRFFSWVKLREGFRHTTGTFNTMLYIAGEAKE 221
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
L+E+L+ EM +SC K++KT TILIS YGK+ IGKAL FE M++ G +PD Y +
Sbjct: 222 YGLVERLLEEMKEKSCEKDIKTCTILISQYGKSKLIGKALEVFENMRRCGCEPDAAAYRM 281
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
++R LCNA K ++A EFYKE+V K ++++ NLY++LL+CLA+SG+ A+ LV D+M++++
Sbjct: 282 MIRALCNAEKCDIAFEFYKEMVEKEMSLDLNLYKMLLNCLAKSGNNAAVHLVADNMMRVS 341
Query: 542 QIPQSE 559
Q+P+ E
Sbjct: 342 QVPEQE 347
Score = 107 bits (267), Expect = 2e-21
Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE + F+PE+V ++L+R G AL FF WV + G+ HTTETYN I I+G ++
Sbjct: 656 LERCNIQFTPELVVEILRRSTLYGRSALNFFSWVGKQVGYWHTTETYNMAIKISGCGKDF 715
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M +L EM C TW I+I YG+ G AL TF MK +P Y L
Sbjct: 716 INMRRLFYEMKRRGCLTTPNTWAIMILQYGRTGMTEIALRTFAEMKTERFNPTASTYKYL 775
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
+ +LC K + A++ ++E++ + L E L CL G R D + K+
Sbjct: 776 IISLCGKKGRKVDEAIKIFQEMIHAGHNPDKELLETYLGCLCEVGKLLEARSCTDSLSKV 835
>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1072
Score = 223 bits (568), Expect = 2e-56
Identities = 106/186 (56%), Positives = 143/186 (76%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RLE LG F PEIVEKVLKRCFKV HLA RFF WV +R GF HTT+TY M+YIAGEA+E
Sbjct: 166 RLENLGFYFEPEIVEKVLKRCFKVPHLAFRFFSWVKMRDGFCHTTKTYYTMLYIAGEAKE 225
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
+++ LV EM+ SC K++KTW+ILIS +GKA IGKAL FE MK SG +PD+ +Y +
Sbjct: 226 FKVVDDLVEEMEKNSCEKDIKTWSILISQFGKAKLIGKALLFFEKMKTSGCEPDEKIYKM 285
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
++ +LCNAGK E+AL FYKE+V K++ ++ +LY++LL +A+SGD A+ LV +DM +++
Sbjct: 286 MVHSLCNAGKGEVALAFYKEMVQKDMRLDLSLYKILLISMAKSGDVGAVHLVANDMSRLS 345
Query: 542 QIPQSE 559
QIP+ +
Sbjct: 346 QIPEHD 351
Score = 102 bits (254), Expect = 6e-20
Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ L F+P +V ++L C G+ AL+FF W+ ++ G+ HT ETYN + I+G ++
Sbjct: 676 LEKCTLQFTPGLVLEILHNCSMHGNAALKFFSWLGVQTGYCHTKETYNMAMKISGREKDF 735
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM + C TW I+I YG+ G +L TF MK +G P+ Y L
Sbjct: 736 KHMRSLFYEMRRKGCLITPDTWAIMIMQYGRTGLTEISLKTFTEMKDNGYIPNDSTYKYL 795
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
L +LC K + A++ + E++ + + L CL +G R D + +I
Sbjct: 796 LISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYLSCLCEAGRLSEARKSTDSLCRI 855
>gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis]
Length = 1039
Score = 219 bits (558), Expect = 4e-55
Identities = 109/182 (59%), Positives = 137/182 (75%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RLE+ G EIV+KVLKRCFKV HLA+RFF WV LR F TT YN M+YIAGEA+E
Sbjct: 152 RLEKSGFELDSEIVDKVLKRCFKVPHLAMRFFNWVKLRDWFDPTTRVYNTMLYIAGEAKE 211
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
LMEKL EM+ SC K+VKTWTILIS YGKA IGKAL +E M KSG +PD VY +
Sbjct: 212 FRLMEKLEEEMEKASCEKDVKTWTILISSYGKAKLIGKALLIYEKMIKSGREPDAVVYRM 271
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
++R+LC AGKA++A+EFY E+ K+I ++ +LY++LL C+ARSGD+ + LV DDMVK++
Sbjct: 272 MIRSLCAAGKADIAMEFYTEMARKDIRLDLSLYKMLLSCIARSGDSAGVHLVADDMVKVS 331
Query: 542 QI 547
QI
Sbjct: 332 QI 333
Score = 97.4 bits (241), Expect = 2e-18
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ + F+PE+V +VL+ C G+ A +FF WV + + HT ETYN I +AG ++
Sbjct: 643 LEKCTVEFTPELVVEVLRNCNTNGYPAFQFFSWVGKQTDYSHTVETYNTAIKLAGRGKDF 702
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM + + TWTI+I YG+ G AL TF MK + +P Y L
Sbjct: 703 KHMRNLFYEMRRKGHSITSDTWTIMIMLYGRTGLTEIALNTFGEMKANNCNPSASTYKYL 762
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
+ +LC K + A+ ++E++ + L E L C+ R D + K+
Sbjct: 763 IVSLCGKKGRKVDEAIRLFQEMISAGHIPDKELIETYLACVCEVDKLSDARKCVDSLQKL 822
>ref|XP_002308333.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550336797|gb|EEE91856.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 1048
Score = 219 bits (557), Expect = 5e-55
Identities = 103/186 (55%), Positives = 139/186 (74%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RL+++G PEIVEKVLKRC+KV HLA RFF WV + GF HTT+TYN M+Y AGEARE
Sbjct: 160 RLDKVGFQLEPEIVEKVLKRCYKVPHLAYRFFNWVKTKDGFCHTTKTYNTMLYTAGEARE 219
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
+++ L+ EM+ SC +++KTWTILI YGKA IGKAL E M+KSG +PD VY V
Sbjct: 220 FSVVDVLLEEMEKYSCERDIKTWTILIRQYGKAKLIGKALLVHEKMRKSGCEPDVEVYEV 279
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
L +LC+AGK E+ALE YKE+V + + +LY++LL+CLA+SGD A++ V DDM++++
Sbjct: 280 TLHSLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNCLAKSGDVSAVQSVADDMIRVS 339
Query: 542 QIPQSE 559
QIP+ +
Sbjct: 340 QIPEHD 345
Score = 95.5 bits (236), Expect = 8e-18
Identities = 58/179 (32%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ + F+PE+V + L+ C G+ AL FF WV + GF TTETYN + ++G ++
Sbjct: 653 LEKCTIQFTPELVAETLRNCGMHGNAALHFFAWVGKQNGFCQTTETYNMAMKVSGRGKDF 712
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM TW I+I YG+ G AL F MK SG +P+ Y L
Sbjct: 713 KHMRSLFYEMRRRGFLIPPDTWAIMIMQYGRTGLTEIALKIFGEMKASGCNPNDSTYKYL 772
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVK 535
+ LC K + A++ ++E++ + L L CL G R D + K
Sbjct: 773 IIFLCGRKGRKVDEAIKIFREMIRAGHVPDKELVGTYLCCLCEVGKLLEARKSVDSLCK 831
>ref|XP_002333469.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 219 bits (557), Expect = 5e-55
Identities = 103/186 (55%), Positives = 139/186 (74%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RL+++G PEIVEKVLKRC+KV HLA RFF WV + GF HTT+TYN M+Y AGEARE
Sbjct: 160 RLDKVGFQLEPEIVEKVLKRCYKVPHLAYRFFNWVKTKDGFCHTTKTYNTMLYTAGEARE 219
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
+++ L+ EM+ SC +++KTWTILI YGKA IGKAL E M+KSG +PD VY V
Sbjct: 220 FSVVDVLLEEMEKYSCERDIKTWTILIRQYGKAKLIGKALLVHEKMRKSGCEPDVEVYEV 279
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
L +LC+AGK E+ALE YKE+V + + +LY++LL+CLA+SGD A++ V DDM++++
Sbjct: 280 TLHSLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNCLAKSGDVSAVQSVADDMIRVS 339
Query: 542 QIPQSE 559
QIP+ +
Sbjct: 340 QIPEHD 345
Score = 95.5 bits (236), Expect = 8e-18
Identities = 58/179 (32%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ + F+PE+V + L+ C G+ AL FF WV + GF TTETYN + ++G ++
Sbjct: 653 LEKCTIQFTPELVAETLRNCGMHGNAALHFFAWVGKQNGFCQTTETYNMAMKVSGRGKDF 712
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM TW I+I YG+ G AL F MK SG +P+ Y L
Sbjct: 713 KHMRSLFYEMRRRGFLIPPDTWAIMIMQYGRTGLTEIALKIFGEMKASGCNPNDSTYKYL 772
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVK 535
+ LC K + A++ ++E++ + L L CL G R D + K
Sbjct: 773 IIFLCGRKGRKVDEAIKIFREMIRAGHVPDKELVGTYLCCLCEVGKLLEARKSVDSLCK 831
>ref|XP_006826424.1| hypothetical protein AMTR_s00004p00162290 [Amborella trichopoda]
gi|548830738|gb|ERM93661.1| hypothetical protein
AMTR_s00004p00162290 [Amborella trichopoda]
Length = 961
Score = 213 bits (542), Expect = 3e-53
Identities = 99/183 (54%), Positives = 137/183 (74%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
L E GL F + V+K+LKRCFK A+RFF WV L+PGF HT +TYN M+YIAGEA+E
Sbjct: 67 LGEAGLTFDSDTVDKILKRCFKARDAAIRFFYWVKLQPGFQHTAQTYNTMLYIAGEAKEF 126
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
DL+++L+ EM+ E C K++KTWTIL+SHYGKA ++G+AL TF+ MKKSG DPD+ VY +
Sbjct: 127 DLIKRLLDEMNSEECPKDIKTWTILVSHYGKAKQLGEALKTFKEMKKSGFDPDETVYGSM 186
Query: 365 LRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIAQ 544
+ +LCNA K+ELA EFYKE+ + ++ + Y+LL+ CL +GD +R V +DM+KIA
Sbjct: 187 VLSLCNARKSELAAEFYKEMALSGMKLDSHGYKLLMTCLGEAGDIFGVRSVGNDMLKIAG 246
Query: 545 IPQ 553
+P+
Sbjct: 247 MPK 249
Score = 121 bits (303), Expect = 1e-25
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ + F+P +V +++++C G+ LRFF WV PG+HHTTETYN I I+G A++
Sbjct: 569 LEKSTIKFTPHLVHEIMRKCQIHGNSTLRFFSWVGRIPGYHHTTETYNLAIKISGSAKDF 628
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M+ L EM + C TWTI+++ YG+ G AL F+AMK +PD+ Y +
Sbjct: 629 KHMKSLYLEMRRKGCLITADTWTIMLAQYGRVGLTNMALRRFKAMKFKKYNPDRNTYKYM 688
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
+ LC K E A+ +KE++ + + E+ L CL G R D + K+
Sbjct: 689 IMFLCGKKGRKVEEAILIFKEMLGVGFSPDQETLEIYLTCLCEVGKLSDARDCVDSLSKV 748
Query: 539 A 541
+
Sbjct: 749 S 749
Score = 60.1 bits (144), Expect = 4e-07
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Frame = +2
Query: 143 YNAMIYIAGEARELDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMK 322
Y ++++ A +D K+VG+M + + V +T + HY K ++ KAL F M+
Sbjct: 787 YGSLVHGLLRAGRVDEALKMVGKMTLDGFSPTVHVYTSFLVHYFKEKQMEKALEIFRKMR 846
Query: 323 KSGLDPDKGVYVVLLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSG-DT 499
+ G +P Y L+R N G A A + + K +F Y + + CL R G
Sbjct: 847 EDGCEPSIITYSALIRGYMNQGLAIDAWNTFWLMKLKGPFPDFETYSMFISCLCRDGRSE 906
Query: 500 EALRLVEDDM 529
EAL+L+ D M
Sbjct: 907 EALQLIYDMM 916
>ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutrema salsugineum]
gi|557100203|gb|ESQ40566.1| hypothetical protein
EUTSA_v10012543mg [Eutrema salsugineum]
Length = 1036
Score = 211 bits (536), Expect = 1e-52
Identities = 98/186 (52%), Positives = 135/186 (72%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RLEEL F P+IVEKVLKRCFKV HLALRFF WV + G+ HT YN M+ IAGEAR+
Sbjct: 150 RLEELSFRFEPDIVEKVLKRCFKVPHLALRFFNWVKDKEGYSHTVGVYNTMLSIAGEARD 209
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
L ++++LV EM+ +C K+++TWTILIS YGKA +IGK L FE M+KSG +PD Y +
Sbjct: 210 LGMVDELVKEMEKNACDKDIRTWTILISVYGKATKIGKGLLVFEKMRKSGFEPDAAAYNI 269
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
++R+LC AG+ +LALEFYKE++ K I Y++LLDC A+S + ++ + DDM++I
Sbjct: 270 MIRSLCIAGRGDLALEFYKEMIGKGITFGLRTYKMLLDCTAKSEKLDIVQSIADDMIRIC 329
Query: 542 QIPQSE 559
+I + +
Sbjct: 330 EISEHD 335
Score = 98.6 bits (244), Expect = 9e-19
Identities = 56/166 (33%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ + F+PE+V +VL+ G+ LRFF WV R G+ H+TE YN I +AG ++
Sbjct: 640 LEKSTVEFTPELVVEVLRNGKIQGNGVLRFFSWVGKRNGYKHSTEAYNMSIKVAGGGKDF 699
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM + C TW I+I YG+ G A+ TF+ MK GL P + L
Sbjct: 700 KQMRNLFYEMRRQGCVITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLMPSSSTFKCL 759
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGD 496
+ LC E A ++E++ + L + L CL G+
Sbjct: 760 ITVLCQKKGRNVEEASRTFREMIRSGYVPDRELVQDYLGCLCEVGN 805
Score = 66.2 bits (160), Expect = 5e-09
Identities = 41/140 (29%), Positives = 69/140 (49%)
Frame = +2
Query: 98 KWVALRPGFHHTTETYNAMIYIAGEARELDLMEKLVGEMDGESCTKNVKTWTILISHYGK 277
K + ++PG H Y ++I + ++++ + + +M+ ESC +V T+T +I Y
Sbjct: 886 KEMGIKPGVH----VYTSLIVHFFKEKQIEKVLETCQKMEEESCEPSVVTYTAMICGYMS 941
Query: 278 AGRIGKALCTFEAMKKSGLDPDKGVYVVLLRTLCNAGKAELALEFYKEIVFKNIAVEFNL 457
G+ +A F MK+ G PD Y + LC AGK+E AL E++ K IA
Sbjct: 942 LGKAEEAWKVFRNMKEKGTSPDFRTYSKFINCLCQAGKSEDALNLLSEMLDKGIAPSTVN 1001
Query: 458 YELLLDCLARSGDTEALRLV 517
+ + L R G + R+V
Sbjct: 1002 FRTVFYGLNREGKQDLARIV 1021
>ref|XP_006348568.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Solanum tuberosum]
Length = 1087
Score = 207 bits (528), Expect = 1e-51
Identities = 96/185 (51%), Positives = 133/185 (71%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
+LE G ++ E+VEKVLKRCFKV HLALRFF W+ R GF HTTETYN MIY+A + +E
Sbjct: 200 QLESAGFEYNEEVVEKVLKRCFKVPHLALRFFDWLKTREGFSHTTETYNTMIYMAADCKE 259
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
L+++LV EM+ SC KN+KTW+IL+SHYG IGKAL FE +KK G +PD Y +
Sbjct: 260 FRLVDELVEEMERSSCQKNLKTWSILLSHYGNGKLIGKALSMFEQLKKLGYEPDLRAYTI 319
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
+L +LCNAGKA++ALE++ E++ K + ++ + LL CLA SG+ A+ V DDM+++
Sbjct: 320 MLSSLCNAGKADIALEYFNEMIHKGLMLDAAMSGQLLKCLANSGNIAAVHKVGDDMIRVC 379
Query: 542 QIPQS 556
IP++
Sbjct: 380 SIPEN 384
Score = 114 bits (284), Expect = 2e-23
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 2/181 (1%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
+LE+ + F+PEIV +VL+ G LAL+FF WV + + HTTE+YN I IAG+ ++
Sbjct: 690 QLEKCNIQFTPEIVMEVLRNFRLQGRLALQFFSWVEKQSSYRHTTESYNTAIKIAGQGKD 749
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
M L +M C TWTI+I YG+ G A+ TF+ MK SG P + Y
Sbjct: 750 FTQMRNLFSDMRRNGCLVTAHTWTIMIMQYGRTGLTDIAVHTFKEMKDSGCKPTESTYKA 809
Query: 362 LLRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVK 535
L+ +LC + + A++ ++E++ + + L E L CL G R + ++K
Sbjct: 810 LITSLCQKKGRRIDEAVKIFQEMIQVGHSPDKELIEDYLGCLCELGKLRDARSCTESLLK 869
Query: 536 I 538
+
Sbjct: 870 L 870
Score = 58.9 bits (141), Expect = 8e-07
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = +2
Query: 239 VKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVLLRTLCNAGKAELALEFYK 418
V +T LI ++ K + GKAL TF+ MK SG P Y L+R N GK A + +
Sbjct: 945 VHVYTSLIGYFFKVKQAGKALETFKEMKDSGCQPTIVTYSALIRGYMNVGKVSEARDVFH 1004
Query: 419 EIVFKNIAVEFNLYELLLDCLARSG-DTEALRLVEDDMVKIAQIPQS 556
++ +F Y + + CL R G EAL+L+ +M+ + +P +
Sbjct: 1005 QMKKNGPYPDFKAYSMFISCLCRIGYSEEALQLI-SEMLDVGIVPST 1050
Score = 56.6 bits (135), Expect = 4e-06
Identities = 35/133 (26%), Positives = 57/133 (42%)
Frame = +2
Query: 119 GFHHTTETYNAMIYIAGEARELDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKA 298
G H T Y ++I + ++ + EM C + T++ LI Y G++ +A
Sbjct: 940 GIHPTVHVYTSLIGYFFKVKQAGKALETFKEMKDSGCQPTIVTYSALIRGYMNVGKVSEA 999
Query: 299 LCTFEAMKKSGLDPDKGVYVVLLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDC 478
F MKK+G PD Y + + LC G +E AL+ E++ I Y +
Sbjct: 1000 RDVFHQMKKNGPYPDFKAYSMFISCLCRIGYSEEALQLISEMLDVGIVPSTVNYRTVFYG 1059
Query: 479 LARSGDTEALRLV 517
L R G + + V
Sbjct: 1060 LNREGKQDLAKTV 1072
>ref|XP_002871218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317055|gb|EFH47477.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1029
Score = 207 bits (527), Expect = 1e-51
Identities = 98/186 (52%), Positives = 133/186 (71%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RLE L F PEIVE VLKRCFKV HLA+RFF WV L+ GF H YN M+ IAGEAR
Sbjct: 144 RLEILSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKLKDGFSHRVGIYNTMLSIAGEARN 203
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
LD++++LV EM+ +C K+++TWTILIS YGKA +IGK L FE M+KSG + D Y +
Sbjct: 204 LDMVDELVKEMEKHACDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDAAAYNI 263
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
++R+LC AG+ +LALEFYKE++ K I Y++LLDC+A+S + ++ + DDMV+I
Sbjct: 264 MIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRIC 323
Query: 542 QIPQSE 559
+I + +
Sbjct: 324 EISEHD 329
Score = 106 bits (265), Expect = 3e-21
Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+L + F+PE+V +VL+ G+ LRFF WV R G+ H +E YN I +AG ++
Sbjct: 633 LEKLTVQFTPELVVEVLRNAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDF 692
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM + C TW I+I YG+ G A+ TF+ MK GL P + L
Sbjct: 693 KQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCL 752
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
+ LC E A + ++E++ + L + L CL G+T+ + D + KI
Sbjct: 753 ITVLCEKKGRNVEEATKTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKI 812
Score = 63.9 bits (154), Expect = 3e-08
Identities = 39/140 (27%), Positives = 69/140 (49%)
Frame = +2
Query: 98 KWVALRPGFHHTTETYNAMIYIAGEARELDLMEKLVGEMDGESCTKNVKTWTILISHYGK 277
K + ++PG H Y ++I + ++ + + + +M ESC +V T+T +I Y
Sbjct: 879 KEIGIKPGVH----VYTSLIVHFFKEKQFEKVLETCHKMKEESCEPSVVTYTAMICGYMS 934
Query: 278 AGRIGKALCTFEAMKKSGLDPDKGVYVVLLRTLCNAGKAELALEFYKEIVFKNIAVEFNL 457
G++ +A F +++ G PD Y + LC AGK+E AL+ E++ K IA
Sbjct: 935 LGKVEEAWKAFRNIEEKGTSPDFKTYSKFINCLCQAGKSEDALKLLSEMLDKGIAPSTIN 994
Query: 458 YELLLDCLARSGDTEALRLV 517
+ + L R G + R+V
Sbjct: 995 FRTVFYGLNREGKQDLARIV 1014
>ref|NP_196258.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171850|sp|Q9FNG8.1|PP366_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g06400, mitochondrial; Flags: Precursor
gi|9758420|dbj|BAB08962.1| unnamed protein product
[Arabidopsis thaliana] gi|332003627|gb|AED91010.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 1030
Score = 206 bits (524), Expect = 3e-51
Identities = 97/186 (52%), Positives = 132/186 (70%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RLE+L F PEIVE VLKRCFKV HLA+RFF WV + GF H YN M+ IAGEAR
Sbjct: 145 RLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARN 204
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
LD++++LV EM+ C K+++TWTILIS YGKA +IGK L FE M+KSG + D Y +
Sbjct: 205 LDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNI 264
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
++R+LC AG+ +LALEFYKE++ K I Y++LLDC+A+S + ++ + DDMV+I
Sbjct: 265 MIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRIC 324
Query: 542 QIPQSE 559
+I + +
Sbjct: 325 EISEHD 330
Score = 103 bits (258), Expect = 2e-20
Identities = 59/180 (32%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ + F+PE+V +VL+ G+ LRFF WV R G+ H +E YN I +AG ++
Sbjct: 635 LEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDF 694
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM + C TW I+I YG+ G A+ TF+ MK GL P + L
Sbjct: 695 KQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCL 754
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
+ LC E A ++E++ + L + L CL G+T+ + D + KI
Sbjct: 755 ITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKI 814
Score = 65.1 bits (157), Expect = 1e-08
Identities = 40/139 (28%), Positives = 69/139 (49%)
Frame = +2
Query: 98 KWVALRPGFHHTTETYNAMIYIAGEARELDLMEKLVGEMDGESCTKNVKTWTILISHYGK 277
K + +PG H Y ++I + ++L+ + + +M+GESC +V T+T +I Y
Sbjct: 881 KEIGTKPGVH----VYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMS 936
Query: 278 AGRIGKALCTFEAMKKSGLDPDKGVYVVLLRTLCNAGKAELALEFYKEIVFKNIAVEFNL 457
G++ +A F M++ G PD Y + LC A K+E AL+ E++ K IA
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTIN 996
Query: 458 YELLLDCLARSGDTEALRL 514
+ + L R G + R+
Sbjct: 997 FRTVFYGLNREGKHDLARI 1015
>ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Solanum lycopersicum]
Length = 1092
Score = 205 bits (521), Expect = 7e-51
Identities = 95/185 (51%), Positives = 132/185 (71%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
+LE G ++ ++VEKVLKRCFKV HLALRFF W+ R GF HTTETYN MIY+A + +E
Sbjct: 205 QLESAGFEYNEDVVEKVLKRCFKVPHLALRFFDWLKTREGFSHTTETYNTMIYMAADCKE 264
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
L+++LV EM+ SC KN+KTW+IL+SHYG IGKAL FE +KK G +PD Y +
Sbjct: 265 FRLVDELVEEMERSSCRKNLKTWSILLSHYGNGKLIGKALSLFEQLKKLGYEPDLRAYTI 324
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
+L +LCNAGKA++ALE++ E++ K + ++ LL CLA SG+ A+ V DDM+++
Sbjct: 325 MLSSLCNAGKADIALEYFNEMIHKGLMLDEATSGQLLKCLANSGNIAAVHKVGDDMIRVC 384
Query: 542 QIPQS 556
IP++
Sbjct: 385 SIPEN 389
Score = 113 bits (282), Expect = 4e-23
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 2/181 (1%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
+LE + F+PEIV +VL+ G LAL+FF WV + + HTTE+YN I IAG+ ++
Sbjct: 695 QLENCNIQFTPEIVMEVLRNFKLQGRLALQFFSWVEKQSSYRHTTESYNTAIKIAGQGKD 754
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
M L +M C TWTI+I YG+ G A+ TF+ MK SG P + Y
Sbjct: 755 FTQMRNLFSDMRRNGCLVTAHTWTIMIMLYGRTGLTDIAVRTFKEMKHSGCKPTESTYKA 814
Query: 362 LLRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVK 535
L+ +LC + + A++ ++E++ + + L E L CL G R + ++K
Sbjct: 815 LITSLCQKKGRRIDEAVKIFQEMIQVGYSPDKELIEDYLGCLCELGKLRDARSCTESLLK 874
Query: 536 I 538
+
Sbjct: 875 L 875
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/106 (32%), Positives = 54/106 (50%)
Frame = +2
Query: 239 VKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVLLRTLCNAGKAELALEFYK 418
V +T LI ++ K ++ KAL TF+ MK SG P Y L+R N GK A + +
Sbjct: 950 VHVYTSLIGYFFKVKQVSKALQTFKEMKDSGCQPTIVTYSALIRGYMNVGKVSEARDVFH 1009
Query: 419 EIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIAQIPQS 556
++ +FN Y + + CL R G++E + +M+ I IP +
Sbjct: 1010 QMKKNGPYPDFNAYSMFISCLCRIGNSEEALQLISEMLNIGIIPST 1055
Score = 58.5 bits (140), Expect = 1e-06
Identities = 35/133 (26%), Positives = 58/133 (43%)
Frame = +2
Query: 119 GFHHTTETYNAMIYIAGEARELDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKA 298
G H T Y ++I + +++ + EM C + T++ LI Y G++ +A
Sbjct: 945 GIHPTVHVYTSLIGYFFKVKQVSKALQTFKEMKDSGCQPTIVTYSALIRGYMNVGKVSEA 1004
Query: 299 LCTFEAMKKSGLDPDKGVYVVLLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDC 478
F MKK+G PD Y + + LC G +E AL+ E++ I Y +
Sbjct: 1005 RDVFHQMKKNGPYPDFNAYSMFISCLCRIGNSEEALQLISEMLNIGIIPSTVNYRTVFYG 1064
Query: 479 LARSGDTEALRLV 517
L R G + + V
Sbjct: 1065 LNREGKQDLAKTV 1077
>ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like isoform 2 [Fragaria vesca
subsp. vesca]
Length = 1037
Score = 203 bits (517), Expect = 2e-50
Identities = 99/185 (53%), Positives = 137/185 (74%), Gaps = 1/185 (0%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RL+EL EIV+ VLKRCFKV HLALRFF WV +R GF HTT+ YN ++ IAG+ +E
Sbjct: 155 RLDELRFELDSEIVDNVLKRCFKVPHLALRFFDWVKMREGFCHTTKIYNTVLCIAGDVKE 214
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
++EKLV EM+ SC K+VKTWTILI YGKA +G+AL +E MKK G +PD V+ +
Sbjct: 215 FGMVEKLVEEMERNSCKKDVKTWTILIQMYGKAKLVGRALLVYEKMKKFGFEPDAVVFRI 274
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDT-EALRLVEDDMVKI 538
++ LC AGKA++A+EFYKE+V K+I ++ +Y+LLL+ +AR DT A+ LV D+M+++
Sbjct: 275 MITALCAAGKADVAMEFYKEMVQKDIGLDIKMYKLLLNSIARYEDTAAAVGLVSDNMIRV 334
Query: 539 AQIPQ 553
+QIP+
Sbjct: 335 SQIPE 339
Score = 91.7 bits (226), Expect = 1e-16
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ ++F+P +V +LK G +AL+FF W+ + G+ HTT+TYN I IAG ++
Sbjct: 643 LEKSAVVFTPGLVLSILKSHSAHGLVALQFFSWIGKQSGYRHTTDTYNMAIKIAGRGKDF 702
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L+ EM TWTI+I YG+ G AL F M KS +P Y L
Sbjct: 703 KHMRNLLYEMRRNRFPITQDTWTIMIMQYGRTGLTEIALQLFREM-KSNCNPTGSTYKYL 761
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
+ +LC K + A++ ++E++ + L E + CL R D + K+
Sbjct: 762 IISLCGRKGRKVDEAIKTFQEMIRAAHIPDKELVETYIGCLCEVDKLSDARRCIDSLSKV 821
>ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like isoform 1 [Fragaria vesca
subsp. vesca]
Length = 1038
Score = 203 bits (517), Expect = 2e-50
Identities = 99/185 (53%), Positives = 137/185 (74%), Gaps = 1/185 (0%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RL+EL EIV+ VLKRCFKV HLALRFF WV +R GF HTT+ YN ++ IAG+ +E
Sbjct: 155 RLDELRFELDSEIVDNVLKRCFKVPHLALRFFDWVKMREGFCHTTKIYNTVLCIAGDVKE 214
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
++EKLV EM+ SC K+VKTWTILI YGKA +G+AL +E MKK G +PD V+ +
Sbjct: 215 FGMVEKLVEEMERNSCKKDVKTWTILIQMYGKAKLVGRALLVYEKMKKFGFEPDAVVFRI 274
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDT-EALRLVEDDMVKI 538
++ LC AGKA++A+EFYKE+V K+I ++ +Y+LLL+ +AR DT A+ LV D+M+++
Sbjct: 275 MITALCAAGKADVAMEFYKEMVQKDIGLDIKMYKLLLNSIARYEDTAAAVGLVSDNMIRV 334
Query: 539 AQIPQ 553
+QIP+
Sbjct: 335 SQIPE 339
Score = 91.7 bits (226), Expect = 1e-16
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ ++F+P +V +LK G +AL+FF W+ + G+ HTT+TYN I IAG ++
Sbjct: 643 LEKSAVVFTPGLVLSILKSHSAHGLVALQFFSWIGKQSGYRHTTDTYNMAIKIAGRGKDF 702
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L+ EM TWTI+I YG+ G AL F M KS +P Y L
Sbjct: 703 KHMRNLLYEMRRNRFPITQDTWTIMIMQYGRTGLTEIALQLFREM-KSNCNPTGSTYKYL 761
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
+ +LC K + A++ ++E++ + L E + CL R D + K+
Sbjct: 762 IISLCGRKGRKVDEAIKTFQEMIRAAHIPDKELVETYIGCLCEVDKLSDARRCIDSLSKV 821
>ref|XP_006286714.1| hypothetical protein CARUB_v10002874mg [Capsella rubella]
gi|482555420|gb|EOA19612.1| hypothetical protein
CARUB_v10002874mg [Capsella rubella]
Length = 1016
Score = 199 bits (507), Expect = 3e-49
Identities = 95/186 (51%), Positives = 132/186 (70%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RLE+L F P+IVE VLKRCFKV HLA RFF WV + GF H YN M+ IAGEAR+
Sbjct: 139 RLEKLCFRFEPKIVENVLKRCFKVPHLARRFFDWVKDKDGFSHRVGIYNTMLSIAGEARD 198
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVV 361
LD++++LV EM+ +C K+++TWTILIS YGKA +IGK L FE M+KSG + D Y +
Sbjct: 199 LDMVDELVKEMEKNACDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDAAAYDI 258
Query: 362 LLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKIA 541
++R+LC AG+ +LALEFYKE++ K I Y++LLDC+ +S + ++ + DDMV+I
Sbjct: 259 MIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCITQSEKVDVVQSIVDDMVRIC 318
Query: 542 QIPQSE 559
+I + +
Sbjct: 319 EISEHD 324
Score = 104 bits (260), Expect = 1e-20
Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE+ + F+PE+V +VL+ G+ LRFF WV R G+ H++E YN I +AG ++
Sbjct: 620 LEKSTVEFTPELVVEVLRNAKIQGNTVLRFFSWVGKRNGYKHSSEAYNMSIKVAGCGKDF 679
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM + C TW I+I YG+ G A+ TF+ MK GL P + L
Sbjct: 680 KQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCL 739
Query: 365 LRTLC--NAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
+ LC E A ++E++ + L + L CL G+T+ + D + KI
Sbjct: 740 ITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLCKI 799
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/134 (28%), Positives = 66/134 (49%)
Frame = +2
Query: 119 GFHHTTETYNAMIYIAGEARELDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKA 298
G + Y ++I + ++L+ + + EM+ E C +V T+T +I Y G++ +A
Sbjct: 869 GIKPSVHVYTSLIVHFFKEKQLEKVIETCQEMEEEGCEPSVVTFTAMICGYMNLGKVEEA 928
Query: 299 LCTFEAMKKSGLDPDKGVYVVLLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDC 478
F M++ G PD Y + LC AGK+E AL+ E++ K IA + +
Sbjct: 929 WKAFRYMEEKGTSPDFKTYSKFINCLCQAGKSEDALKLLSEMLDKGIAPSTINFRTVFYG 988
Query: 479 LARSGDTEALRLVE 520
L R G + R+V+
Sbjct: 989 LNREGKQDLARIVQ 1002
>ref|XP_004971739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Setaria italica]
Length = 1077
Score = 199 bits (505), Expect = 5e-49
Identities = 104/186 (55%), Positives = 132/186 (70%), Gaps = 2/186 (1%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RLE LG+ ++PE+V KVLKRCFKV L FF WV PGF HTTETYN M+YI GEAR
Sbjct: 167 RLESLGVTYTPELVGKVLKRCFKVRQLGFWFFHWVKRFPGFRHTTETYNTMLYITGEARR 226
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSG-LDPDKGVYV 358
D+ME+LVGEMD E C K++KTWTI++S YGKAG IGK L TFE M+KSG + D VY
Sbjct: 227 FDIMEELVGEMDIEMCPKDIKTWTIILSSYGKAGDIGKMLSTFEVMRKSGCIRIDSKVYR 286
Query: 359 VLLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGD-TEALRLVEDDMVK 535
+L LCNA K ELALEFYK+I +N+ V ++ LL+ CLA + + EA+ + DD++K
Sbjct: 287 TVLHALCNAEKPELALEFYKDIP-RNMEVGTDILRLLMCCLATTDNAVEAVCSIRDDLIK 345
Query: 536 IAQIPQ 553
+ P+
Sbjct: 346 GMKHPE 351
Score = 98.2 bits (243), Expect = 1e-18
Identities = 56/142 (39%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE + FSP +V+ +LKRC + AL+FF WV R + TT+TY + +AG A++
Sbjct: 681 LEMRSVHFSPNLVDAILKRCKRNSCAALQFFSWVGKRSYYMPTTKTYTTAMKLAGSAKDF 740
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM C V TW +++ YG AG KAL TF MK+ G PDK Y L
Sbjct: 741 KHMRYLYREMLRTGCFPTVDTWNVMVCQYGNAGLSEKALKTFHEMKQHGFVPDKTTYQHL 800
Query: 365 LRTL-CNAG-KAELALEFYKEI 424
+ L C+ G K ++A +KE+
Sbjct: 801 IMYLTCSKGRKVDVAAIIFKEM 822
>ref|NP_001066728.1| Os12g0456100 [Oryza sativa Japonica Group]
gi|77555567|gb|ABA98363.1| hypothetical protein
LOC_Os12g27060 [Oryza sativa Japonica Group]
gi|113649235|dbj|BAF29747.1| Os12g0456100 [Oryza sativa
Japonica Group] gi|125579252|gb|EAZ20398.1| hypothetical
protein OsJ_36005 [Oryza sativa Japonica Group]
Length = 1117
Score = 195 bits (496), Expect = 6e-48
Identities = 100/185 (54%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Frame = +2
Query: 2 RLEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEARE 181
RLE LG+ ++P +V VL RCFK HL +FF WV PGF HTTETYNAM+YIAGE R
Sbjct: 198 RLENLGVTYTPRLVSLVLNRCFKKRHLGFKFFDWVRQVPGFQHTTETYNAMLYIAGEERN 257
Query: 182 LDLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKS-GLDPDKGVYV 358
MEKL+ EMD E C K++KTWTI+IS YGKA +IGK L TF+AM KS + D VY
Sbjct: 258 FGAMEKLMDEMDKEMCLKDIKTWTIVISSYGKARQIGKMLSTFQAMGKSRHVAADSKVYR 317
Query: 359 VLLRTLCNAGKAELALEFYKEIVFKNIAVEFNLYELLLDCLARSGDTEALRLVEDDMVKI 538
+L LCN+ K+ELALEFYK++ +N V +++ LLL CLA S + E + V DDM+K
Sbjct: 318 TILHALCNSAKSELALEFYKDMA-RNTEVGSDIFRLLLCCLAGSDNAEGVFYVRDDMIKS 376
Query: 539 AQIPQ 553
+ P+
Sbjct: 377 MKYPE 381
Score = 99.0 bits (245), Expect = 7e-19
Identities = 53/142 (37%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Frame = +2
Query: 5 LEELGLLFSPEIVEKVLKRCFKVGHLALRFFKWVALRPGFHHTTETYNAMIYIAGEAREL 184
LE + F+P++V+ ++KRC AL+FF WV R + TT+TYN I +AG A++
Sbjct: 713 LEMTSISFTPDLVDAIMKRCKANSRAALQFFSWVGKRSYYMQTTKTYNTAIKLAGSAKDF 772
Query: 185 DLMEKLVGEMDGESCTKNVKTWTILISHYGKAGRIGKALCTFEAMKKSGLDPDKGVYVVL 364
M L EM C V TW ++I YG AG AL TF MK+ G PDK Y L
Sbjct: 773 KHMRHLYREMIWAECCPTVDTWNVMICQYGNAGLTEMALETFYQMKQGGFQPDKTTYSHL 832
Query: 365 LRTLC--NAGKAELALEFYKEI 424
+ L K + A++ + E+
Sbjct: 833 IMYLSRRKGRKVDAAVKIFHEM 854