BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00031320
         (576 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516338.1| Photosystem Q(B) protein, putative [Ricinus ...    60   3e-09
gb|AAT57721.1| photosystem II 32 kDa protein [Aneura mirabilis]        57   6e-09
ref|YP_001687217.1| photosystem II protein D1 [Aneura mirabilis]...    57   6e-09
gb|AAP85557.1| PSII DI protein [Actinidia deliciosa]                   55   6e-09
ref|XP_002523211.1| Photosystem Q(B) protein, putative [Ricinus ...    58   7e-09
sp|P13910.2|PSBA_VICFA RecName: Full=Photosystem Q(B) protein; A...    56   9e-09
gb|ADY76084.1| PsbA [Loasa vulcanica]                                  54   9e-09
gb|AGU12570.1| photosystem II D1 subunit, partial (chloroplast) ...    56   9e-09
ref|XP_003591343.1| Photosystem Q(B) protein [Medicago truncatul...    56   9e-09
ref|XP_002519782.1| Photosystem Q(B) protein, putative [Ricinus ...    55   1e-08
gb|ABL86563.1| photosystem II 32 kDa protein (chloroplast) [Arch...    55   2e-08
gb|ADY76096.1| PsbA [Vitis rotundifolia]                               54   2e-08
sp|Q2WGI0.1|PSBA_SELUN RecName: Full=Photosystem Q(B) protein; A...    54   2e-08
gb|AAN85801.1| photosystem II protein [Bryum cellulare]                55   2e-08
gb|ABL86538.1| photosystem II 32 kDa protein (chloroplast) [Omph...    55   2e-08
gb|ABL86515.1| photosystem II 32 kDa protein (chloroplast) [Leje...    55   2e-08
gb|ABL86509.1| photosystem II 32 kDa protein (chloroplast) [Colu...    55   2e-08
gb|ABL86498.1| photosystem II 32 kDa protein (chloroplast) [Chei...    55   2e-08
gb|AAG60671.1|AF314010_1 PSII D1 protein [Prunus x yedoensis]          54   2e-08
ref|NP_050810.1| photosystem II protein D1 [Nephroselmis olivace...    54   2e-08

>ref|XP_002516338.1| Photosystem Q(B) protein, putative [Ricinus communis]
           gi|223544504|gb|EEF46022.1| Photosystem Q(B) protein,
           putative [Ricinus communis]
          Length = 189

 Score = 60.1 bits (144), Expect(2) = 3e-09
 Identities = 40/79 (50%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+FCLGM   I VA+ T V  AAA VV L+Y  G+  F D +PL I
Sbjct: 83  FLLGVACYMGREWELSFCLGMRPWIAVAYSTPV--AAANVVFLIYPIGQGSFFDGMPLGI 140

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQ EH I M
Sbjct: 141 FGTFNFMSV-FQVEHNILM 158



 Score = 27.3 bits (59), Expect(2) = 3e-09
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     SI+E L +   YELIV  FLL   C
Sbjct: 55  LHFYPIWEAASIDEWLYNGSPYELIVLYFLLGVAC 89


>gb|AAT57721.1| photosystem II 32 kDa protein [Aneura mirabilis]
          Length = 353

 Score = 56.6 bits (135), Expect(2) = 6e-09
 Identities = 40/79 (50%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+L  V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYLAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFM-IVFQAEHNILM 194



 Score = 29.6 bits (65), Expect(2) = 6e-09
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125


>ref|YP_001687217.1| photosystem II protein D1 [Aneura mirabilis]
           gi|190360047|sp|B0YPN1.1|PSBA_ANEMR RecName:
           Full=Photosystem Q(B) protein; AltName: Full=32 kDa
           thylakoid membrane protein; AltName: Full=Photosystem II
           protein D1; Flags: Precursor gi|153973818|gb|ABS54478.1|
           photosystem II protein D1 [Aneura mirabilis]
          Length = 353

 Score = 56.6 bits (135), Expect(2) = 6e-09
 Identities = 40/79 (50%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+L  V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYLAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFM-IVFQAEHNILM 194



 Score = 29.6 bits (65), Expect(2) = 6e-09
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125


>gb|AAP85557.1| PSII DI protein [Actinidia deliciosa]
          Length = 353

 Score = 54.7 bits (130), Expect(2) = 6e-09
 Identities = 40/79 (50%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY  R+ EL+F LGM   I VA+ T V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYKGREWELSFRLGMRPWIAVAYSTPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFM-IVFQAEHNILM 194



 Score = 31.6 bits (70), Expect(2) = 6e-09
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV QFLL   C
Sbjct: 91  LHFYPIWEAASVDEWLYNGGPYELIVLQFLLGVAC 125


>ref|XP_002523211.1| Photosystem Q(B) protein, putative [Ricinus communis]
           gi|223537507|gb|EEF39132.1| Photosystem Q(B) protein,
           putative [Ricinus communis]
          Length = 353

 Score = 58.2 bits (139), Expect(2) = 7e-09
 Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+  + EL+FCLGM   I VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGHEWELSFCLGMRPWIAVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F+   FQAEH I M
Sbjct: 177 SSTFNFK-IVFQAEHNILM 194



 Score = 27.7 bits (60), Expect(2) = 7e-09
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L +   YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLHNGSPYELIVLHFLLGVAC 125


>sp|P13910.2|PSBA_VICFA RecName: Full=Photosystem Q(B) protein; AltName: Full=32 kDa
           thylakoid membrane protein; AltName: Full=Photosystem II
           protein D1; Flags: Precursor gi|28564242|emb|CAA35688.2|
           psbA [Vicia faba]
          Length = 353

 Score = 55.8 bits (133), Expect(2) = 9e-09
 Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I+VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIVVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFM-IVFQAEHNILM 194



 Score = 29.6 bits (65), Expect(2) = 9e-09
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125


>gb|ADY76084.1| PsbA [Loasa vulcanica]
          Length = 353

 Score = 54.3 bits (129), Expect(2) = 9e-09
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFM-IVFQAEHNILM 194



 Score = 31.2 bits (69), Expect(2) = 9e-09
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = +2

Query: 131 NRVAEAENNNWCQY*VLYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           N +    NN       L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 75  NNIISGANNPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125


>gb|AGU12570.1| photosystem II D1 subunit, partial (chloroplast) [Petrocoptis
           pyrenaica]
          Length = 347

 Score = 55.8 bits (133), Expect(2) = 9e-09
 Identities = 40/79 (50%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+   V  AAAT V L+Y  GR  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYSAPV--AAATAVFLIYPIGRGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFM-IVFQAEHNILM 194



 Score = 29.6 bits (65), Expect(2) = 9e-09
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125


>ref|XP_003591343.1| Photosystem Q(B) protein [Medicago truncatula]
           gi|355480391|gb|AES61594.1| Photosystem Q(B) protein
           [Medicago truncatula]
          Length = 297

 Score = 55.8 bits (133), Expect(2) = 9e-09
 Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I+VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 83  FLLGVACYMGREWELSFRLGMRPWIVVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 140

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 141 SGTFNFM-IVFQAEHNILM 158



 Score = 29.6 bits (65), Expect(2) = 9e-09
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 55  LHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 89


>ref|XP_002519782.1| Photosystem Q(B) protein, putative [Ricinus communis]
           gi|223541021|gb|EEF42578.1| Photosystem Q(B) protein,
           putative [Ricinus communis]
          Length = 263

 Score = 55.5 bits (132), Expect(2) = 1e-08
 Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I+VA+   V  AAAT + L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIVVAYSAPV--AAATTIFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFM-IVFQAEHNILM 194



 Score = 29.6 bits (65), Expect(2) = 1e-08
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125


>gb|ABL86563.1| photosystem II 32 kDa protein (chloroplast) [Archilejeunea
           parviflora]
          Length = 353

 Score = 55.1 bits (131), Expect(2) = 2e-08
 Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
              + F    FQAEH I M
Sbjct: 177 SGTLNFM-IVFQAEHNILM 194



 Score = 29.6 bits (65), Expect(2) = 2e-08
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125


>gb|ADY76096.1| PsbA [Vitis rotundifolia]
          Length = 353

 Score = 54.3 bits (129), Expect(2) = 2e-08
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFM-IVFQAEHNILM 194



 Score = 30.4 bits (67), Expect(2) = 2e-08
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLNNGGPYELIVLHFLLGVAC 125


>sp|Q2WGI0.1|PSBA_SELUN RecName: Full=Photosystem Q(B) protein; AltName: Full=32 kDa
           thylakoid membrane protein; AltName: Full=Photosystem II
           protein D1; Flags: Precursor gi|67968296|dbj|BAE00196.1|
           photosystem II protein D1 (chloroplast) [Selaginella
           uncinata]
          Length = 354

 Score = 54.3 bits (129), Expect(2) = 2e-08
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFM-IVFQAEHNILM 194



 Score = 30.0 bits (66), Expect(2) = 2e-08
 Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     SI+E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASIDEWLYNGGPYELIVLHFLLGVAC 125


>gb|AAN85801.1| photosystem II protein [Bryum cellulare]
          Length = 353

 Score = 54.7 bits (130), Expect(2) = 2e-08
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYSAPV--AAATAVFLIYSIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFM-IVFQAEHNILM 194



 Score = 29.6 bits (65), Expect(2) = 2e-08
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125


>gb|ABL86538.1| photosystem II 32 kDa protein (chloroplast) [Omphalanthus ovalis]
          Length = 353

 Score = 54.7 bits (130), Expect(2) = 2e-08
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGXFNFM-IVFQAEHNILM 194



 Score = 29.6 bits (65), Expect(2) = 2e-08
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125


>gb|ABL86515.1| photosystem II 32 kDa protein (chloroplast) [Lejeunea sp. Gradstein
           & Jost 10063]
          Length = 353

 Score = 54.7 bits (130), Expect(2) = 2e-08
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFMXV-FQAEHNILM 194



 Score = 29.6 bits (65), Expect(2) = 2e-08
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125


>gb|ABL86509.1| photosystem II 32 kDa protein (chloroplast) [Colura acroloba]
          Length = 353

 Score = 54.7 bits (130), Expect(2) = 2e-08
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFMXV-FQAEHNILM 194



 Score = 29.6 bits (65), Expect(2) = 2e-08
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125


>gb|ABL86498.1| photosystem II 32 kDa protein (chloroplast) [Cheilolejeunea
           lineata]
          Length = 353

 Score = 54.7 bits (130), Expect(2) = 2e-08
 Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFMEQ 491
                F    FQAEH I M +
Sbjct: 177 SGTFNFM-IVFQAEHNILMRK 196



 Score = 29.6 bits (65), Expect(2) = 2e-08
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           L+FYP     S++E L + G YELIV  FLL   C
Sbjct: 91  LHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125


>gb|AAG60671.1|AF314010_1 PSII D1 protein [Prunus x yedoensis]
          Length = 353

 Score = 54.3 bits (129), Expect(2) = 2e-08
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGRELELSFRLGMRPWIAVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFM-IVFQAEHNILM 194



 Score = 30.0 bits (66), Expect(2) = 2e-08
 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
 Frame = +2

Query: 182 YFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           +FYP     S++E L D G YELIV  FLL   C
Sbjct: 92  HFYPIWEAASVDEWLYDGGPYELIVLHFLLGVAC 125


>ref|NP_050810.1| photosystem II protein D1 [Nephroselmis olivacea]
           gi|18203462|sp|Q9TL35.1|PSBA_NEPOL RecName:
           Full=Photosystem Q(B) protein; AltName: Full=32 kDa
           thylakoid membrane protein; AltName: Full=Photosystem II
           protein D1; Flags: Precursor
           gi|5880688|gb|AAD54781.1|AF137379_4 D1 reaction-center
           protein of photosystem II (chloroplast) [Nephroselmis
           olivacea]
          Length = 353

 Score = 54.3 bits (129), Expect(2) = 2e-08
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 YLLGVACYISRD*ELNFCLGMCSQIIVAHLTHVTNAAATVVILMYQFGR--FCDDIPLEI 428
           +LLGVACY+ R+ EL+F LGM   I VA+   V  AAAT V L+Y  G+  F D +PL I
Sbjct: 119 FLLGVACYMGREWELSFRLGMRPWIAVAYSAPV--AAATAVFLIYPIGQGSFSDGMPLGI 176

Query: 429 I*HI*FRDCKFQAEHIIFM 485
                F    FQAEH I M
Sbjct: 177 SGTFNFM-IVFQAEHNILM 194



 Score = 30.0 bits (66), Expect(2) = 2e-08
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +2

Query: 179 LYFYP-----SIEE*LKDSGLYELIVRQFLLFTWC 268
           ++FYP     SI+E L + G YELIV  FLL   C
Sbjct: 91  IHFYPIWEAASIDEWLYNGGCYELIVLHFLLGVAC 125