BLASTX nr result
ID: Stemona21_contig00031278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00031278
(233 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283111.2| PREDICTED: DNA topoisomerase 6 subunit B [Vi... 77 2e-12
emb|CBI16435.3| unnamed protein product [Vitis vinifera] 77 2e-12
gb|EOY32516.1| Topoisomerase 6 subunit B isoform 2 [Theobroma ca... 76 5e-12
gb|EOY32515.1| Topoisomerase 6 subunit B isoform 1 [Theobroma ca... 76 5e-12
ref|XP_006297133.1| hypothetical protein CARUB_v10013135mg [Caps... 75 7e-12
dbj|BAB02486.1| DNA topoisomerase VI subunit B-like protein [Ara... 75 9e-12
ref|NP_188714.2| DNA topoisomerase 6 subunit B [Arabidopsis thal... 75 9e-12
ref|XP_002885404.1| hypothetical protein ARALYDRAFT_318827 [Arab... 74 2e-11
ref|XP_006406350.1| hypothetical protein EUTSA_v10020214mg [Eutr... 73 5e-11
ref|XP_006386093.1| hypothetical protein POPTR_0003s22040g [Popu... 72 8e-11
ref|XP_006361287.1| PREDICTED: DNA topoisomerase 6 subunit B-lik... 72 1e-10
ref|XP_006361286.1| PREDICTED: DNA topoisomerase 6 subunit B-lik... 72 1e-10
emb|CAE47077.1| putative topoisomerase VI subunit B [Oryza sativ... 70 2e-10
ref|NP_001062761.1| Os09g0279600 [Oryza sativa Japonica Group] g... 70 2e-10
sp|B8BDQ4.1|TOP6B_ORYSI RecName: Full=DNA topoisomerase 6 subuni... 70 2e-10
ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago trun... 70 2e-10
gb|AAQ75096.1| topoisomerase 6 subunit B-like protein [Oryza sat... 70 2e-10
ref|XP_002513444.1| Type II DNA topoisomerase VI subunit B, puta... 70 3e-10
ref|XP_004956458.1| PREDICTED: DNA topoisomerase 6 subunit B-lik... 70 4e-10
gb|EMJ09251.1| hypothetical protein PRUPE_ppa002281mg [Prunus pe... 70 4e-10
>ref|XP_002283111.2| PREDICTED: DNA topoisomerase 6 subunit B [Vitis vinifera]
Length = 656
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRLYQ 87
VDYEMALEYATQSGVSEEPRE IYL +L+ + FI+FHSPVF FRLYQ
Sbjct: 609 VDYEMALEYATQSGVSEEPREAIYLQSLEDGKN-FIDFHSPVFAFRLYQ 656
>emb|CBI16435.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRLYQ 87
VDYEMALEYATQSGVSEEPRE IYL +L+ + FI+FHSPVF FRLYQ
Sbjct: 626 VDYEMALEYATQSGVSEEPREAIYLQSLEDGKN-FIDFHSPVFAFRLYQ 673
>gb|EOY32516.1| Topoisomerase 6 subunit B isoform 2 [Theobroma cacao]
Length = 513
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRLYQ 87
VDYEMALEYATQSGV+EEPRED+YL +L S+ F +FHSP+FVFRL+Q
Sbjct: 466 VDYEMALEYATQSGVNEEPREDMYLQSLYAKSN-FFDFHSPIFVFRLFQ 513
>gb|EOY32515.1| Topoisomerase 6 subunit B isoform 1 [Theobroma cacao]
Length = 669
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRLYQ 87
VDYEMALEYATQSGV+EEPRED+YL +L S+ F +FHSP+FVFRL+Q
Sbjct: 622 VDYEMALEYATQSGVNEEPREDMYLQSLYAKSN-FFDFHSPIFVFRLFQ 669
>ref|XP_006297133.1| hypothetical protein CARUB_v10013135mg [Capsella rubella]
gi|482565842|gb|EOA30031.1| hypothetical protein
CARUB_v10013135mg [Capsella rubella]
Length = 670
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRL 93
VDYEMALEYATQSGVSEEPRE+IYL LD++ FI+ HSP FVFRL
Sbjct: 622 VDYEMALEYATQSGVSEEPRENIYLQHLDSNKTNFIDLHSPTFVFRL 668
>dbj|BAB02486.1| DNA topoisomerase VI subunit B-like protein [Arabidopsis thaliana]
Length = 694
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRL 93
VDYEMALEYATQSGVSEEPRE+IYL LD + FI+ HSP FVFRL
Sbjct: 646 VDYEMALEYATQSGVSEEPRENIYLQHLDPNKSNFIDLHSPTFVFRL 692
>ref|NP_188714.2| DNA topoisomerase 6 subunit B [Arabidopsis thaliana]
gi|75169001|sp|Q9C5V6.1|TOP6B_ARATH RecName: Full=DNA
topoisomerase 6 subunit B; Short=AtTOP6B; AltName:
Full=Protein BRASSINOSTEROID INSENSITIVE 3; AltName:
Full=Protein ELONGATED HYPOCOTYL 6; AltName:
Full=Protein ROOT HAIRLESS 3 gi|12331188|emb|CAC24690.1|
topoisomerase 6 subunit B [Arabidopsis thaliana]
gi|332642901|gb|AEE76422.1| DNA topoisomerase 6 subunit
B [Arabidopsis thaliana]
Length = 670
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRL 93
VDYEMALEYATQSGVSEEPRE+IYL LD + FI+ HSP FVFRL
Sbjct: 622 VDYEMALEYATQSGVSEEPRENIYLQHLDPNKSNFIDLHSPTFVFRL 668
>ref|XP_002885404.1| hypothetical protein ARALYDRAFT_318827 [Arabidopsis lyrata subsp.
lyrata] gi|297331244|gb|EFH61663.1| hypothetical protein
ARALYDRAFT_318827 [Arabidopsis lyrata subsp. lyrata]
Length = 691
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRL 93
VDYEMALEYATQSGVSEEPRE+IYL LD + FI+ HSP FVFRL
Sbjct: 643 VDYEMALEYATQSGVSEEPRENIYLQHLDPNKSNFIDLHSPNFVFRL 689
>ref|XP_006406350.1| hypothetical protein EUTSA_v10020214mg [Eutrema salsugineum]
gi|557107496|gb|ESQ47803.1| hypothetical protein
EUTSA_v10020214mg [Eutrema salsugineum]
Length = 671
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRL 93
VDYEMALEYATQSGVSEEPRE IYL L+ ++ FI+ HSP FVFRL
Sbjct: 623 VDYEMALEYATQSGVSEEPRETIYLQHLNPNTSNFIDLHSPTFVFRL 669
>ref|XP_006386093.1| hypothetical protein POPTR_0003s22040g [Populus trichocarpa]
gi|550343750|gb|ERP63890.1| hypothetical protein
POPTR_0003s22040g [Populus trichocarpa]
Length = 673
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRL 93
VDYEMALEYATQSGV+EEPREDI++ LD + FIEF SP+FVFRL
Sbjct: 626 VDYEMALEYATQSGVTEEPREDIFIQTLD-PENKFIEFQSPIFVFRL 671
>ref|XP_006361287.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform X2 [Solanum
tuberosum]
Length = 573
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRLY 90
VDYEM LEYATQ+GV+EEPREDIY+ +LD I+ SP+FVFRLY
Sbjct: 525 VDYEMGLEYATQTGVNEEPREDIYIESLDEDKKNLIDLQSPIFVFRLY 572
>ref|XP_006361286.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform X1 [Solanum
tuberosum]
Length = 673
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRLY 90
VDYEM LEYATQ+GV+EEPREDIY+ +LD I+ SP+FVFRLY
Sbjct: 625 VDYEMGLEYATQTGVNEEPREDIYIESLDEDKKNLIDLQSPIFVFRLY 672
>emb|CAE47077.1| putative topoisomerase VI subunit B [Oryza sativa Indica Group]
Length = 696
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFR 96
VDYEMALEYA QSGVSEEPRE +YLN+L+ S+ FI+F SPVFVFR
Sbjct: 649 VDYEMALEYAMQSGVSEEPREALYLNSLE-GSYKFIDFQSPVFVFR 693
>ref|NP_001062761.1| Os09g0279600 [Oryza sativa Japonica Group]
gi|49387842|dbj|BAD26507.1| putative topoisomerase 6
subunit B [Oryza sativa Japonica Group]
gi|113630994|dbj|BAF24675.1| Os09g0279600 [Oryza sativa
Japonica Group] gi|222641206|gb|EEE69338.1| hypothetical
protein OsJ_28656 [Oryza sativa Japonica Group]
Length = 696
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFR 96
VDYEMALEYA QSGVSEEPRE +YLN+L+ S+ FI+F SPVFVFR
Sbjct: 649 VDYEMALEYAMQSGVSEEPREALYLNSLE-GSYKFIDFQSPVFVFR 693
>sp|B8BDQ4.1|TOP6B_ORYSI RecName: Full=DNA topoisomerase 6 subunit B; Short=OsTOP6B
gi|218201815|gb|EEC84242.1| hypothetical protein
OsI_30680 [Oryza sativa Indica Group]
Length = 696
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFR 96
VDYEMALEYA QSGVSEEPRE +YLN+L+ S+ FI+F SPVFVFR
Sbjct: 649 VDYEMALEYAMQSGVSEEPREALYLNSLE-GSYKFIDFQSPVFVFR 693
>ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago truncatula]
gi|355486528|gb|AES67731.1| DNA topoisomerase 6 subunit
B [Medicago truncatula]
Length = 671
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRLYQ 87
VDYEMALE+ATQSGVSEEPRE IY+ ALD + I+ H+P+FVFR++Q
Sbjct: 624 VDYEMALEFATQSGVSEEPRETIYIQALDAENKT-IDLHAPIFVFRVFQ 671
>gb|AAQ75096.1| topoisomerase 6 subunit B-like protein [Oryza sativa Japonica
Group]
Length = 615
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFR 96
VDYEMALEYA QSGVSEEPRE +YLN+L+ S+ FI+F SPVFVFR
Sbjct: 568 VDYEMALEYAMQSGVSEEPREALYLNSLE-GSYKFIDFQSPVFVFR 612
>ref|XP_002513444.1| Type II DNA topoisomerase VI subunit B, putative [Ricinus communis]
gi|223547352|gb|EEF48847.1| Type II DNA topoisomerase VI
subunit B, putative [Ricinus communis]
Length = 656
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRL 93
VDYEMALEYATQSGVSEEPREDIY+ L+ + FI+F SP F+FRL
Sbjct: 609 VDYEMALEYATQSGVSEEPREDIYIQELEIENR-FIDFQSPFFIFRL 654
>ref|XP_004956458.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Setaria italica]
Length = 692
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFR 96
VDYEMAL+YA QSGVSEEPRE IYLN+L+ S+ F++F SPVFVFR
Sbjct: 645 VDYEMALDYAMQSGVSEEPREAIYLNSLE-GSYKFVDFQSPVFVFR 689
>gb|EMJ09251.1| hypothetical protein PRUPE_ppa002281mg [Prunus persica]
Length = 692
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = -1
Query: 233 VDYEMALEYATQSGVSEEPREDIYLNALDTSSHAFIEFHSPVFVFRLY 90
VDYEMALEYAT SGVSEEPRE I++ +L+ + F++ HSP FVFRL+
Sbjct: 644 VDYEMALEYATHSGVSEEPREAIFIQSLEAAEDNFMDLHSPAFVFRLF 691