BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00031220
         (680 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...   229   6e-58
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             221   2e-55
ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623...   220   3e-55
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             218   1e-54
ref|XP_004301972.1| PREDICTED: uncharacterized protein LOC101291...   216   7e-54
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     209   6e-52
gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subc...   206   5e-51
gb|AAL31077.1|AC091749_6 putative polyprotein [Oryza sativa Japo...   206   5e-51
gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subc...   205   1e-50
gb|AAP44597.1| putative polyprotein [Oryza sativa Japonica Group]     205   1e-50
ref|NP_001068285.2| Os11g0617500 [Oryza sativa Japonica Group] g...   204   2e-50
gb|ABG22552.1| retrotransposon protein, putative, unclassified, ...   204   2e-50
gb|ABA97615.1| retrotransposon protein, putative, unclassified [...   204   3e-50
gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Jap...   203   5e-50
gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subc...   203   5e-50
gb|AAK92584.1|AC074354_18 Putative retroelement [Oryza sativa Ja...   201   2e-49
emb|CAD39384.2| OSJNBb0016B03.14 [Oryza sativa Japonica Group]        201   2e-49
emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]                  199   7e-49
gb|AAU10841.1| putative polyprotein [Oryza sativa Japonica Group]     199   7e-49
gb|ABA96941.1| retrotransposon protein, putative, unclassified [...   199   9e-49

>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score =  229 bits (584), Expect = 6e-58
 Identities = 117/235 (49%), Positives = 149/235 (63%), Gaps = 10/235 (4%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            +D+C PF   ++  K  +W   CE AF QLKEYLA   LLS P  G++L LYLA++    
Sbjct: 1108 TDKCHPFFQIIKKGKKMEWTPECEEAFGQLKEYLARAPLLSTPREGDQLLLYLAISKRAT 1167

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            S VL R++E K  P+YY SK    AE RYP +EK A AL+TA+R LRPYFQAH +VV+TD
Sbjct: 1168 SSVLVREEEGKQHPVYYTSKALVDAETRYPPMEKWALALITAARKLRPYFQAHQIVVMTD 1227

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADF----------IAEFPP 513
            QPLRQVL +PD SGRL KW+VELSEFD+ YRPR A KAQAL DF          + E  P
Sbjct: 1228 QPLRQVLQKPDASGRLVKWSVELSEFDLSYRPRGATKAQALVDFMVDCVEPGEEVQEEQP 1287

Query: 514  FSPPPTHQVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
                 +   W++ VD           +++ SP+GT+  YA++F+F  TNN AEYE
Sbjct: 1288 EEQEDSKGTWLVMVDGSCSEQGSGAGVVIRSPEGTEITYAVKFEFQLTNNQAEYE 1342


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  221 bits (562), Expect = 2e-55
 Identities = 115/230 (50%), Positives = 148/230 (64%), Gaps = 5/230 (2%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            +D+CLPF + L+    F WD+  E AF +LK+YL++P +L KPEVGE L LY+AV+   +
Sbjct: 1073 TDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAV 1132

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            S VL R+D  + RPI+Y SK    AE RYP IEK A A+VT++R LRPYFQ+HT+ V+TD
Sbjct: 1133 SSVLVREDRGEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTD 1192

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPFSPPPT---- 531
            QPLR  L  P  SGR+TKWAVELSE+DI +RPR A+K+Q LADF+ E P  S        
Sbjct: 1193 QPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIELPLQSAERAVSGN 1252

Query: 532  -HQVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
              + W LYVD           + + SP       + R +F ATNNVAEYE
Sbjct: 1253 RGEEWSLYVDGSSSARGSGIGIRLVSPTAEVLEQSFRLRFVATNNVAEYE 1302


>ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623105 [Citrus sinensis]
          Length = 1407

 Score =  220 bits (561), Expect = 3e-55
 Identities = 115/235 (48%), Positives = 144/235 (61%), Gaps = 10/235 (4%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            +D+C PF   +R  K  +W   CE AF  LK+YL    LLS P  G++L LYLAV+    
Sbjct: 1121 TDKCQPFFQVMRRGKKTEWTPGCEEAFRNLKQYLQQAPLLSTPRDGDKLNLYLAVSDRAA 1180

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            S VL R++E    PIYY SK    AE RYP +EK A ALV A+R LRPYFQA  V V+T+
Sbjct: 1181 SSVLVREEEGVQYPIYYTSKALLDAETRYPPLEKWALALVVAARKLRPYFQAFPVSVITN 1240

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPFS-------- 519
            QPLRQ+L +PD SGRL KWAVELSEFD+ Y+PR AIKAQA+ADF+AEF            
Sbjct: 1241 QPLRQILHKPDASGRLVKWAVELSEFDMDYKPRAAIKAQAMADFVAEFAEPEVCLDQQGA 1300

Query: 520  --PPPTHQVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
                   QVW + VD           +++  P+G +  YA++ +F ATNN AEYE
Sbjct: 1301 DIGDDETQVWQISVDGSSGERGSGAGIVLEGPEGEEISYAVKLEFAATNNQAEYE 1355


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  218 bits (556), Expect = 1e-54
 Identities = 112/227 (49%), Positives = 147/227 (64%), Gaps = 2/227 (0%)
 Frame = +1

Query: 4   SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
           +D+ LPF   L+G K F WDE CE AF QLK YL +P +LSKPEV E+L LY++V+   +
Sbjct: 270 TDKSLPFYQILKGNKGFLWDEKCEEAFGQLKAYLTTPPILSKPEVDEKLYLYVSVSNHAV 329

Query: 184 SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
           SGVL R+D  + +PIYY+SK     E RY  +EKLA A+VT++R LRPYFQ+H V V+T+
Sbjct: 330 SGVLVREDRGEQKPIYYVSKSMTDPETRYTMMEKLALAVVTSARKLRPYFQSHPVQVLTN 389

Query: 364 QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAE--FPPFSPPPTHQ 537
           QPLR +L  P  SGRL KWAVELSE+DI+++ R ++KAQ LADF+ E   P     P +Q
Sbjct: 390 QPLRTILHSPSQSGRLAKWAVELSEYDIEFKSRISMKAQVLADFLTELPIPGTIERPENQ 449

Query: 538 VWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
            W L+VD           + + SP       + R  F A+NN AEYE
Sbjct: 450 TWKLHVDGSSTKQGSVVGIKLESPTSEILEQSFRLLFDASNNEAEYE 496


>ref|XP_004301972.1| PREDICTED: uncharacterized protein LOC101291061 [Fragaria vesca
           subsp. vesca]
          Length = 567

 Score =  216 bits (549), Expect = 7e-54
 Identities = 119/256 (46%), Positives = 155/256 (60%), Gaps = 31/256 (12%)
 Frame = +1

Query: 4   SDRCLPFLDTLRGE-KAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTT 180
           +DRCLPF   L+   K+  W + CE AF  LKE++    +LSKP  G+ L +YL+V+   
Sbjct: 28  TDRCLPFFKALKKVGKSIDWTDECEKAFINLKEHMGKAPVLSKPRSGDVLLIYLSVSTAA 87

Query: 181 LSGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVT 360
           +S VL R++E     IYY+SK F  AE RYP IEKLAFAL+T +R LRPYFQAHT+ V+T
Sbjct: 88  ISSVLVREEEKHEEAIYYVSKGFVDAEFRYPEIEKLAFALITLARKLRPYFQAHTIKVMT 147

Query: 361 DQPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFP-PFSP----- 522
           +QPL+QVL++P+ SGRL K AVEL EFDI Y PRTA+K QA+ADFI++F  P  P     
Sbjct: 148 NQPLKQVLWKPETSGRLVKCAVELGEFDIHYSPRTAVKGQAIADFISKFTNPLFPSNGGN 207

Query: 523 ------PPTHQV------------------WMLYVDXXXXXXXXXXXLIVSSPDGTQARY 630
                 PP  +V                  W LYVD           L++++P   +  Y
Sbjct: 208 TENTIHPPRDRVQPLKEETGTPAVCDHDPIWTLYVDGSSNQSGSGAGLVLTTPQNDELEY 267

Query: 631 ALRFQFTATNNVAEYE 678
           ALRF F A+NN A+YE
Sbjct: 268 ALRFNFKASNNEAKYE 283


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  209 bits (532), Expect = 6e-52
 Identities = 108/225 (48%), Positives = 143/225 (63%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            +D+  PF   L+G K F W E    AF QLK +L +   LS+P +GE L LY+AVT  T+
Sbjct: 559  TDKSTPFFKVLKGNKDFSWGEEQSTAFRQLKAHLITLPTLSRPMLGETLYLYIAVTSATV 618

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            S V+ R+++ +  PIY+IS     AE  YP IEK AFA+V A+R L+PYF AH V V+TD
Sbjct: 619  SAVIIREEDKQQHPIYFISHTLLAAETNYPLIEKAAFAVVVAARKLKPYFNAHPVTVLTD 678

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPFSPPPTHQVW 543
            QPL + L   + SGRL KWAVELS F IQY+PR +IK QALADF+AE   +   P   VW
Sbjct: 679  QPLEKALENFEKSGRLIKWAVELSGFGIQYKPRPSIKGQALADFLAEC-TYQEEPNPGVW 737

Query: 544  MLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
             +Y D           +++ SP+G +  YAL+F F+A+NN +EYE
Sbjct: 738  EVYTDGSSTTNSSGAGILIISPNGDEFEYALKFTFSASNNESEYE 782


>gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1412

 Score =  206 bits (524), Expect = 5e-51
 Identities = 105/228 (46%), Positives = 141/228 (61%), Gaps = 3/228 (1%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            ++R LPF  TLRG   F W   C+ AF +LK+YL SP  L  P  G +L LYLA +P  +
Sbjct: 705  AERGLPFFKTLRGAGKFSWTPECQAAFDELKQYLQSPPDLVSPAPGSDLLLYLAASPVAV 764

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            + +L ++ E   +P+Y++S+  +GA+ RY  +EKLA+ALV ASR L+ YFQAH V V   
Sbjct: 765  NAILIQETESGQKPVYFVSEALQGAKIRYIEMEKLAYALVMASRKLKHYFQAHKVTVPLQ 824

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPF---SPPPTH 534
             PL +VL   +++GRL+KWA ELS FD+ +  RTAIK+Q LADF+AE+ P     P P  
Sbjct: 825  YPLGEVLRGKEITGRLSKWAAELSPFDLHFVARTAIKSQILADFVAEWTPAFAPKPEPAK 884

Query: 535  QVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
            Q W++Y D            +V+ P G   RYA R QF  TNN AEYE
Sbjct: 885  QPWVMYSDGSWSHKGASAVAVVAPPGGVPIRYAARLQFDTTNNTAEYE 932


>gb|AAL31077.1|AC091749_6 putative polyprotein [Oryza sativa Japonica Group]
            gi|22655740|gb|AAN04157.1| Putative polyprotein [Oryza
            sativa Japonica Group] gi|31431207|gb|AAP53022.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1265

 Score =  206 bits (524), Expect = 5e-51
 Identities = 103/228 (45%), Positives = 142/228 (62%), Gaps = 3/228 (1%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            ++R LPF  TLRG   F W   C+ AF +LK+YL SP  L  P  G EL LYLA +P  +
Sbjct: 513  AERGLPFFKTLRGAGKFNWTPECQAAFDELKQYLQSPPALISPPPGSELLLYLAASPVAV 572

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            S  L ++ +   +P+Y++S+  +GA+ RY  +EKLA+ALV ASR L+ YFQAH V+V + 
Sbjct: 573  SAALVQETKFGQKPVYFVSEALQGAKTRYIEMEKLAYALVMASRKLKHYFQAHKVIVPSQ 632

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPF---SPPPTH 534
             PL ++L   +++GRL+KWA ELS FD+ +  R+AIK+Q LADF+AE+ P     P P  
Sbjct: 633  YPLGEILRGKEVTGRLSKWAAELSPFDLHFVARSAIKSQVLADFVAEWTPVLAPDPEPAE 692

Query: 535  QVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
            Q W++  D            ++ SP+G   RYA R QF  TNN AEYE
Sbjct: 693  QFWVMCSDGSWSHKGPGIAAVLFSPNGVPIRYAARLQFDTTNNAAEYE 740


>gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1908

 Score =  205 bits (521), Expect = 1e-50
 Identities = 103/228 (45%), Positives = 142/228 (62%), Gaps = 3/228 (1%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            ++R LPF  TLRG   F W   C+ AF +LK+YL SP  L  P  G EL LYLA +P  +
Sbjct: 1157 AERGLPFFKTLRGAGKFNWTPECQAAFDELKQYLQSPPALISPPPGSELLLYLAASPVAI 1216

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            S  L ++ E   +P+Y++S+  +GA+ RY  +EKLA+ALV ASR L+ YFQA+ V+V + 
Sbjct: 1217 SAALVQETESGQKPVYFVSEALQGAKTRYIEMEKLAYALVMASRKLKHYFQANKVIVPSQ 1276

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPF---SPPPTH 534
             PL ++L   +++GRL+KWA ELS FD+ +   +AIK+Q LADF+AE+ P     P P  
Sbjct: 1277 YPLGEILRGKEVTGRLSKWAAELSPFDLYFVAHSAIKSQVLADFVAEWTPILAPDPEPAE 1336

Query: 535  QVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
            Q W++  D            ++ SP+G   RYA R QF  TNNVAEYE
Sbjct: 1337 QFWVMCSDGSWSHKGAGVATVLFSPNGVPIRYAARLQFDTTNNVAEYE 1384


>gb|AAP44597.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1862

 Score =  205 bits (521), Expect = 1e-50
 Identities = 103/228 (45%), Positives = 142/228 (62%), Gaps = 3/228 (1%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            ++R LPF  TLRG   F W   C+ AF +LK+YL SP  L  P  G EL LYLA +P  +
Sbjct: 1111 AERGLPFFKTLRGAGKFNWTPECQAAFDELKQYLQSPPALISPPPGSELLLYLAASPVAI 1170

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            S  L ++ E   +P+Y++S+  +GA+ RY  +EKLA+ALV ASR L+ YFQA+ V+V + 
Sbjct: 1171 SAALVQETESGQKPVYFVSEALQGAKTRYIEMEKLAYALVMASRKLKHYFQANKVIVPSQ 1230

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPF---SPPPTH 534
             PL ++L   +++GRL+KWA ELS FD+ +   +AIK+Q LADF+AE+ P     P P  
Sbjct: 1231 YPLGEILRGKEVTGRLSKWAAELSPFDLYFVAHSAIKSQVLADFVAEWTPILAPDPEPAE 1290

Query: 535  QVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
            Q W++  D            ++ SP+G   RYA R QF  TNNVAEYE
Sbjct: 1291 QFWVMCSDGSWSHKGAGVATVLFSPNGVPIRYAARLQFDTTNNVAEYE 1338


>ref|NP_001068285.2| Os11g0617500 [Oryza sativa Japonica Group]
           gi|255680267|dbj|BAF28648.2| Os11g0617500, partial
           [Oryza sativa Japonica Group]
          Length = 627

 Score =  204 bits (519), Expect = 2e-50
 Identities = 104/228 (45%), Positives = 141/228 (61%), Gaps = 3/228 (1%)
 Frame = +1

Query: 4   SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
           ++R LPF  TLRG + F W   C+ AF +LK+YL SP  L     G EL LYLA +P  +
Sbjct: 311 AERGLPFFKTLRGVEKFHWTPECQAAFGELKQYLQSPPALISLAPGSELLLYLAASPVAV 370

Query: 184 SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
           S  L ++ +   +P+Y+ISK  +GA+ RY  +EKLA+ALV AS  L+ YFQ H V+V + 
Sbjct: 371 SAALVQEIDSGQKPVYFISKALQGAKTRYIEMEKLAYALVMASCKLKHYFQTHKVIVPSQ 430

Query: 364 QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPF---SPPPTH 534
            PL ++L+  +++GRL+KWA ELS FD+ +  RTAIK+Q LADF+AE+ P     P P  
Sbjct: 431 YPLGEILWGKEVTGRLSKWAAELSPFDLHFVARTAIKSQVLADFVAEWTPALAPEPEPVK 490

Query: 535 QVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
           Q W++Y D            ++ SP G   RYA R QF  TNN AEYE
Sbjct: 491 QPWVMYSDGSWSHKGAGIAAVLISPSGVPIRYAARLQFDTTNNAAEYE 538


>gb|ABG22552.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 612

 Score =  204 bits (519), Expect = 2e-50
 Identities = 104/228 (45%), Positives = 141/228 (61%), Gaps = 3/228 (1%)
 Frame = +1

Query: 4   SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
           ++R LPF  TLRG + F W   C+ AF +LK+YL SP  L     G EL LYLA +P  +
Sbjct: 296 AERGLPFFKTLRGVEKFHWTPECQAAFGELKQYLQSPPALISLAPGSELLLYLAASPVAV 355

Query: 184 SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
           S  L ++ +   +P+Y+ISK  +GA+ RY  +EKLA+ALV AS  L+ YFQ H V+V + 
Sbjct: 356 SAALVQEIDSGQKPVYFISKALQGAKTRYIEMEKLAYALVMASCKLKHYFQTHKVIVPSQ 415

Query: 364 QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPF---SPPPTH 534
            PL ++L+  +++GRL+KWA ELS FD+ +  RTAIK+Q LADF+AE+ P     P P  
Sbjct: 416 YPLGEILWGKEVTGRLSKWAAELSPFDLHFVARTAIKSQVLADFVAEWTPALAPEPEPVK 475

Query: 535 QVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
           Q W++Y D            ++ SP G   RYA R QF  TNN AEYE
Sbjct: 476 QPWVMYSDGSWSHKGAGIAAVLISPSGVPIRYAARLQFDTTNNAAEYE 523


>gb|ABA97615.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 827

 Score =  204 bits (518), Expect = 3e-50
 Identities = 103/228 (45%), Positives = 140/228 (61%), Gaps = 3/228 (1%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            ++R LPF  TLRG   F W   C+ AF +LK+YL SP  L  P +G EL LYLA +P  +
Sbjct: 540  AERGLPFFKTLRGMGKFSWTPECQAAFDELKQYLQSPPALISPTLGSELLLYLAASPVAV 599

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            S  L ++ E   +P+Y++S+  +GA+ RY  +EKLA+ALV ASR L+ YFQAH V+V + 
Sbjct: 600  SAALVQETEFGQKPVYFVSEALQGAKARYIEMEKLAYALVMASRKLKHYFQAHKVIVPSQ 659

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPF---SPPPTH 534
             PL ++L   ++SGRL+KWA ELS FD+ +  RTA+K+Q L DF+AE+ P     P P  
Sbjct: 660  YPLGEILRGKEISGRLSKWAAELSPFDLHFVARTAVKSQVLTDFVAEWTPVFASEPEPVE 719

Query: 535  QVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
            Q W++  D            I+ SP+     YA R QF  TNN AEYE
Sbjct: 720  QPWVMCSDGSWSHKGAGIAAILISPNRIPVWYAARLQFNTTNNAAEYE 767


>gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1931

 Score =  203 bits (516), Expect = 5e-50
 Identities = 101/228 (44%), Positives = 142/228 (62%), Gaps = 3/228 (1%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            ++R LPFL TLRG   F W   C+ AF +LK++L SP  L  P +G EL LYLA +P  +
Sbjct: 1227 AERGLPFLKTLRGAGKFNWTPECQAAFDELKQHLQSPPALISPPLGSELLLYLAASPVAV 1286

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            S  L ++ +   +P+Y++S+  +GA+ RY  +EKLA+ALV ASR L+ YFQAH V+V + 
Sbjct: 1287 SAALVQETKFGQKPVYFVSEALQGAKTRYIEMEKLAYALVMASRKLKHYFQAHKVIVPSQ 1346

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPF---SPPPTH 534
             PL ++L   +++GRL+KWA ELS FD+ +  R+AIK+Q L DF+AE+ P     P P  
Sbjct: 1347 YPLGEILRGKEVTGRLSKWAAELSLFDLHFVARSAIKSQVLVDFVAEWTPVLAPDPEPAE 1406

Query: 535  QVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
            Q W++  D            ++ SP+G   RY  R QF  TNN AEYE
Sbjct: 1407 QFWVMCSDGSWSHKGAGIAAVLFSPNGVPIRYVARLQFDTTNNAAEYE 1454


>gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 2035

 Score =  203 bits (516), Expect = 5e-50
 Identities = 101/228 (44%), Positives = 142/228 (62%), Gaps = 3/228 (1%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            ++R LPFL TLRG   F W   C+ AF +LK++L SP  L  P +G EL LYLA +P  +
Sbjct: 1331 AERGLPFLKTLRGAGKFNWTPECQAAFDELKQHLQSPPALISPPLGSELLLYLAASPVAV 1390

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            S  L ++ +   +P+Y++S+  +GA+ RY  +EKLA+ALV ASR L+ YFQAH V+V + 
Sbjct: 1391 SAALVQETKFGQKPVYFVSEALQGAKTRYIEMEKLAYALVMASRKLKHYFQAHKVIVPSQ 1450

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPF---SPPPTH 534
             PL ++L   +++GRL+KWA ELS FD+ +  R+AIK+Q L DF+AE+ P     P P  
Sbjct: 1451 YPLGEILRGKEVTGRLSKWAAELSLFDLHFVARSAIKSQVLVDFVAEWTPVLAPDPEPAE 1510

Query: 535  QVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
            Q W++  D            ++ SP+G   RY  R QF  TNN AEYE
Sbjct: 1511 QFWVMCSDGSWSHKGAGIAAVLFSPNGVPIRYVARLQFDTTNNAAEYE 1558


>gb|AAK92584.1|AC074354_18 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1705

 Score =  201 bits (511), Expect = 2e-49
 Identities = 97/225 (43%), Positives = 140/225 (62%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            ++R LPF  TL+G   F W   C+ AF +LK+YL SP  L  P  G EL LYLA +P  +
Sbjct: 1067 AERGLPFFKTLQGAGKFNWTPECQAAFDELKQYLQSPPALISPAPGSELLLYLAASPVAV 1126

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            +  L ++ +   +P+Y++S+  +GA+ RY  +EKLA+ALV ASR L+ YFQAH V+V + 
Sbjct: 1127 NAALVQETDSGQKPVYFVSEALQGAKTRYIEMEKLAYALVMASRKLKYYFQAHKVIVPSQ 1186

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPFSPPPTHQVW 543
             PL ++L+  +++ RL+KW  ELS FD+ +  RT +K+Q LADF+A      P P  Q+W
Sbjct: 1187 YPLGEILWGKEVTSRLSKWGAELSPFDLHFVARTTVKSQVLADFVAP----EPEPVEQLW 1242

Query: 544  MLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
            ++Y D            +++SP+G   RYA R QF  TNN AEYE
Sbjct: 1243 VMYSDGSWSHKGAGIAAVLNSPNGVPIRYAARLQFDTTNNAAEYE 1287


>emb|CAD39384.2| OSJNBb0016B03.14 [Oryza sativa Japonica Group]
          Length = 1323

 Score =  201 bits (510), Expect = 2e-49
 Identities = 104/226 (46%), Positives = 139/226 (61%), Gaps = 3/226 (1%)
 Frame = +1

Query: 10   RCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTLSG 189
            R LPF  TLRG   F W   C+ AF +LK+YL SP  L  P  G EL LYLA +P  +S 
Sbjct: 622  RGLPFFKTLRGAGKFNWTPECQEAFDELKQYLQSPPALISPTPGSELLLYLAASPVAVSA 681

Query: 190  VLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTDQP 369
             L ++ +   +P+Y+IS+  +GA+ RY  +EKLA+ALV ASR L+ YFQAH V+V    P
Sbjct: 682  ALVQETKFGQKPVYFISEALQGAKTRYIEMEKLAYALVMASRKLKHYFQAHKVIVPPQYP 741

Query: 370  LRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPFSPPPT---HQV 540
            L ++L   +++GRL+KWA ELS FD+ +  RTAIK+Q LADF+AE+     P T    Q+
Sbjct: 742  LGEILRGKEVTGRLSKWAAELSPFDLHFVARTAIKSQVLADFVAEWTLVFAPETELVEQL 801

Query: 541  WMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
            W++  D            ++ SP+G   RYA R QF  TNN AEYE
Sbjct: 802  WVMSSDGSWSHKGAGIAAVLISPNGVPIRYAARLQFNTTNNAAEYE 847


>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
          Length = 2097

 Score =  199 bits (506), Expect = 7e-49
 Identities = 104/231 (45%), Positives = 143/231 (61%), Gaps = 7/231 (3%)
 Frame = +1

Query: 7    DRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTLS 186
            ++ LPF   LR   +F+W +    AF +LK+YL S  +L  P  GE L +Y+A T  T+S
Sbjct: 1321 EKGLPFFKLLRKHGSFEWTKEANDAFEELKKYLTSTPVLVSPRPGETLLIYVAATLQTVS 1380

Query: 187  GVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTDQ 366
            GVL  + ++  RP+YY+S++  G +ERYP ++KL + L+ +SR LR YFQAH VVV T  
Sbjct: 1381 GVLVVERDNIQRPVYYVSEVLHGPKERYPHVQKLLYGLLMSSRKLRHYFQAHKVVVPTGY 1440

Query: 367  PLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEFPPFSPPPT----- 531
            PL QVL   + SGR+ KWAVEL  FD+ +  RTAIK+QA+A+FIAE+   +P PT     
Sbjct: 1441 PLGQVLGNRESSGRIAKWAVELGAFDLHFISRTAIKSQAIAEFIAEWT--NPEPTQGPEY 1498

Query: 532  --HQVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
              H  W LY D           +++ SP G   +YA++  F ATNNVAEYE
Sbjct: 1499 EHHDEWTLYFDGSLMLQGSGAGVVLISPTGEHIKYAIQLNFPATNNVAEYE 1549


>gb|AAU10841.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1528

 Score =  199 bits (506), Expect = 7e-49
 Identities = 101/229 (44%), Positives = 143/229 (62%), Gaps = 4/229 (1%)
 Frame = +1

Query: 4    SDRCLPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTL 183
            ++R LPF  TLRG   F W   C+ AF++LK+YL S   L     G EL LYLA  P  +
Sbjct: 895  AERGLPFFKTLRGAGKFNWTPECQAAFNELKQYLQSRPALISAASGSELLLYLAALPVAV 954

Query: 184  SGVLTRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTD 363
            S  L ++ +   +PIY++S+  +GA+ RY ++EKLA+ALV ASR ++ YFQAH V+V + 
Sbjct: 955  SAALFQETDSGQKPIYFVSEALQGAKTRYIKMEKLAYALVMASRKVKHYFQAHKVIVPSQ 1014

Query: 364  QPLRQVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAE----FPPFSPPPT 531
             PL ++L+  +++GRL+KWA ELS F+  +  RTA+K+Q LA+F+AE    F P  P P 
Sbjct: 1015 YPLGEILWGKEVTGRLSKWAAELSPFNFHFVARTAVKSQVLANFVAEWTSAFAP-DPEPV 1073

Query: 532  HQVWMLYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
             Q W++Y D            +++SP+G   RYA R QF  TNN AEYE
Sbjct: 1074 EQPWVMYFDGSWSHRGAGIAAVLTSPNGAPIRYAARLQFDTTNNAAEYE 1122


>gb|ABA96941.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 496

 Score =  199 bits (505), Expect = 9e-49
 Identities = 105/224 (46%), Positives = 139/224 (62%), Gaps = 3/224 (1%)
 Frame = +1

Query: 16  LPFLDTLRGEKAFKWDEACEGAFHQLKEYLASPHLLSKPEVGEELRLYLAVTPTTLSGVL 195
           LPF  TLRG   F W   C+ AF +LK+YL SP  L  P  G EL LYLA +P  +S  L
Sbjct: 164 LPFFKTLRGAGKFSWTPKCQVAFDELKQYLQSPPALISPAPGSELLLYLAASPVAVSAAL 223

Query: 196 TRDDEHKLRPIYYISKIFRGAEERYPRIEKLAFALVTASRMLRPYFQAHTVVVVTDQPLR 375
            ++ E   +P+Y+ISK  +GA+ RY  +EKLA+ALV ASR L+ YFQAH V+V +  PL 
Sbjct: 224 VQETESGQKPVYFISKALQGAKTRYIEMEKLAYALVMASRKLKHYFQAHKVIVPSQYPLG 283

Query: 376 QVLFRPDLSGRLTKWAVELSEFDIQYRPRTAIKAQALADFIAEF-PPFSPPP--THQVWM 546
           +VL   +++GRL KWA ELS FD+ +  RTAIK+Q LA+F+AE+ P F P P    Q W+
Sbjct: 284 EVLRGKEITGRLRKWAAELSPFDLHFVARTAIKSQVLANFVAEWTPTFVPEPELIEQPWI 343

Query: 547 LYVDXXXXXXXXXXXLIVSSPDGTQARYALRFQFTATNNVAEYE 678
           ++ D            +++S  G    YA R QF +TNN AEYE
Sbjct: 344 MHFDGSWSHRGPGAAAVLTSLGGVPIWYAARLQFDSTNNTAEYE 387