BLASTX nr result

ID: Stemona21_contig00030256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00030256
         (767 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006837084.1| hypothetical protein AMTR_s00110p00099550 [A...   231   2e-58
emb|CBI38165.3| unnamed protein product [Vitis vinifera]              158   2e-36
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   158   2e-36
ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containi...   157   4e-36
ref|XP_003623821.1| Pentatricopeptide repeat-containing protein ...   157   5e-36
ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citr...   156   8e-36
ref|XP_004492675.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-35
ref|XP_002517667.1| pentatricopeptide repeat-containing protein,...   154   2e-35
ref|XP_002883803.1| pentatricopeptide repeat-containing protein ...   154   3e-35
gb|ESW09789.1| hypothetical protein PHAVU_009G156000g [Phaseolus...   153   5e-35
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat...   152   9e-35
ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar...   152   9e-35
ref|XP_004239007.1| PREDICTED: putative pentatricopeptide repeat...   152   2e-34
ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing prote...   152   2e-34
ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containi...   151   2e-34
ref|XP_003628710.1| Pentatricopeptide repeat-containing protein ...   151   2e-34
emb|CBI38763.3| unnamed protein product [Vitis vinifera]              151   2e-34
ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [S...   151   2e-34
ref|XP_006853457.1| hypothetical protein AMTR_s00032p00190360 [A...   150   3e-34
ref|XP_006646769.1| PREDICTED: putative pentatricopeptide repeat...   150   6e-34

>ref|XP_006837084.1| hypothetical protein AMTR_s00110p00099550 [Amborella trichopoda]
            gi|548839677|gb|ERM99937.1| hypothetical protein
            AMTR_s00110p00099550 [Amborella trichopoda]
          Length = 683

 Score =  231 bits (589), Expect = 2e-58
 Identities = 118/254 (46%), Positives = 163/254 (64%)
 Frame = +2

Query: 5    IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
            I+K+G   N++VG+ LV +YAKCG  D A  V   M  +D++S SVLI+EY K+G +D A
Sbjct: 274  IIKAGFESNLVVGNALVDMYAKCGSLDCASRVFEIMHYMDEYSCSVLISEYAKYGLIDYA 333

Query: 185  RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLLCAETM 364
               F+S +VK I  WN+LI GY EL  D EA+E F+ M  EG+K DEFT+GSL+      
Sbjct: 334  CEFFESSKVKDISSWNALIAGYSELERDWEAIEIFRAMRMEGVKADEFTYGSLIRGCYLY 393

Query: 365  GLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMIS 544
            GLRYG QLHSQTIK+GI SSV+VGS+L+DMY+    C++   VF++I E NLV WNAMI+
Sbjct: 394  GLRYGMQLHSQTIKIGIDSSVYVGSSLIDMYTEFFYCQAGRMVFDAIYEKNLVSWNAMIN 453

Query: 545  GFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFES 724
            G+  N +  +A+  F  M   R+  D VT S  ++          G Q++ +  K  +  
Sbjct: 454  GYAQNEMGLEALELFCQMRALRVEIDRVTLSSALNACTSSLALSMGNQINGVIHKAGYVH 513

Query: 725  NIVVGSALIDMYAK 766
            ++VVG++LIDMY K
Sbjct: 514  DVVVGTSLIDMYGK 527



 Score =  157 bits (396), Expect = 5e-36
 Identities = 94/286 (32%), Positives = 149/286 (52%), Gaps = 32/286 (11%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           ++ SG   ++ + + L+++Y+KCGC D   SV   M   +  SW+ ++A Y+K G++  A
Sbjct: 10  VIVSGFQPDLYLSNHLMNMYSKCGCLDHIESVFREMGRKNLHSWNTMLACYSKLGFISDA 69

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAET 361
           R LFD    +    +N++I  Y + G  E ALE F+ M+  G K D FT  S++  C   
Sbjct: 70  RNLFDKMPHRDSVSYNTMIACYDKYGPCENALEVFRAMKLSGSKVDHFTVSSVISACMNI 129

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
             L  G Q+HS  IK+GI  +V+VGSALV+ Y    D + A  VF S+ +  +  WN M+
Sbjct: 130 SFLCQGRQVHSDVIKIGIGLNVYVGSALVEFYGKCGDIDEARKVFESMPDREVFSWNTML 189

Query: 542 SGF--------GL---------NNLDY--------------KAVNAFRLMMVQRIRPDIV 628
            G+        G+         N + +              KA++ F  + +  ++PD+V
Sbjct: 190 LGYVQSGRIEDGILFFEEIPCKNVVSWTTIISGCVRCGWRDKAIHFFSGLRLANLKPDLV 249

Query: 629 TFSRVIDXXXXXXXXXGGRQVHALACKLSFESNIVVGSALIDMYAK 766
            F  +++          G++VH L  K  FESN+VVG+AL+DMYAK
Sbjct: 250 GFVSIVNAFSALYCLEEGQKVHGLIIKAGFESNLVVGNALVDMYAK 295



 Score =  136 bits (343), Expect = 7e-30
 Identities = 83/286 (29%), Positives = 138/286 (48%), Gaps = 32/286 (11%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           ++K G+  NV VGS LV  Y KCG  D AR V   M   + FSW+ ++  Y + G ++  
Sbjct: 142 VIKIGIGLNVYVGSALVEFYGKCGDIDEARKVFESMPDREVFSWNTMLLGYVQSGRIEDG 201

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLLCAETM 364
              F+    K++  W ++I G +  G  ++A+  F  +    +K D   F S++     +
Sbjct: 202 ILFFEEIPCKNVVSWTTIISGCVRCGWRDKAIHFFSGLRLANLKPDLVGFVSIVNAFSAL 261

Query: 365 -GLRYGEQLHSQTIKLGIHSSVFVGSALVDMYS--SNLDCES------------------ 481
             L  G+++H   IK G  S++ VG+ALVDMY+   +LDC S                  
Sbjct: 262 YCLEEGQKVHGLIIKAGFESNLVVGNALVDMYAKCGSLDCASRVFEIMHYMDEYSCSVLI 321

Query: 482 -----------AMSVFNSIQEPNLVLWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDIV 628
                      A   F S +  ++  WNA+I+G+     D++A+  FR M ++ ++ D  
Sbjct: 322 SEYAKYGLIDYACEFFESSKVKDISSWNALIAGYSELERDWEAIEIFRAMRMEGVKADEF 381

Query: 629 TFSRVIDXXXXXXXXXGGRQVHALACKLSFESNIVVGSALIDMYAK 766
           T+  +I           G Q+H+   K+  +S++ VGS+LIDMY +
Sbjct: 382 TYGSLIRGCYLYGLRY-GMQLHSQTIKIGIDSSVYVGSSLIDMYTE 426



 Score =  106 bits (264), Expect = 1e-20
 Identities = 70/242 (28%), Positives = 109/242 (45%), Gaps = 32/242 (13%)
 Frame = +2

Query: 137  SVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIK 316
            S LI  YT+  Y    R +FD+   K++  WN++I GY +  +  EALE F +M +  ++
Sbjct: 418  SSLIDMYTEFFYCQAGRMVFDAIYEKNLVSWNAMINGYAQNEMGLEALELFCQMRALRVE 477

Query: 317  GDEFTFGSLL-LCAETMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDC------ 475
             D  T  S L  C  ++ L  G Q++    K G    V VG++L+DMY    D       
Sbjct: 478  IDRVTLSSALNACTSSLALSMGNQINGVIHKAGYVHDVVVGTSLIDMYGKCRDMDHALCA 537

Query: 476  -------------------------ESAMSVFNSIQEPNLVLWNAMISGFGLNNLDYKAV 580
                                     ESA  +F  + E N+V WN M+SG   N   ++A+
Sbjct: 538  FSTITQHSVFSWTALLGSYVKCGMWESANELFEKMPEKNIVSWNTMLSGHAQNGSGFEAI 597

Query: 581  NAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFESNIVVGSALIDMY 760
              + LM+     PD ++   ++           G+QVH+ A K  +  N+ V S +I+MY
Sbjct: 598  KLYSLMLKSGELPDGISLICLLAVCSNHILEEQGKQVHSHAIKTGYYMNLSVKSVIINMY 657

Query: 761  AK 766
             K
Sbjct: 658  HK 659



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 1/152 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           I K+G   +V+VG+ L+ +Y KC   D A    S +     FSW+ L+  Y K G  + A
Sbjct: 506 IHKAGYVHDVVVGTSLIDMYGKCRDMDHALCAFSTITQHSVFSWTALLGSYVKCGMWESA 565

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAET 361
             LF+    K+I  WN+++ G+ + G   EA++ +  M   G   D  +   LL +C+  
Sbjct: 566 NELFEKMPEKNIVSWNTMLSGHAQNGSGFEAIKLYSLMLKSGELPDGISLICLLAVCSNH 625

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMY 457
           +    G+Q+HS  IK G + ++ V S +++MY
Sbjct: 626 ILEEQGKQVHSHAIKTGYYMNLSVKSVIINMY 657


>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  158 bits (400), Expect = 2e-36
 Identities = 91/257 (35%), Positives = 139/257 (54%), Gaps = 2/257 (0%)
 Frame = +2

Query: 2   QIVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDC 181
           +I+ +     + + + L+ +Y KC C D AR +  RM   + F+W+ LI+  TK G++D 
Sbjct: 40  RILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDE 99

Query: 182 ARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAE 358
           A  LF S        WNS++ G+ +    EE+LE F +M  E    +E++FGS L  CA 
Sbjct: 100 AARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAG 159

Query: 359 TMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAM 538
            M L  G Q+H+   K    + V++GSAL+DMYS       A  VF+ + E NLV WN++
Sbjct: 160 LMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSL 219

Query: 539 ISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLS- 715
           I+ +  N    +A+  F  MM   + PD VT + V+           G Q+HA   K + 
Sbjct: 220 ITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNK 279

Query: 716 FESNIVVGSALIDMYAK 766
           F  ++V+G+AL+DMYAK
Sbjct: 280 FRDDLVLGNALVDMYAK 296



 Score =  114 bits (284), Expect = 5e-23
 Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
 Frame = +2

Query: 2   QIVKSGLHRNVLV-GSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVD 178
           ++VK+   R+ LV G+ LV +YAKC   + AR V  RM   +  S + +++ Y +   V 
Sbjct: 273 RVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVK 332

Query: 179 CARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLLCAE 358
            AR +F     +++  WN+LI GY + G +EEAL  F+ ++ E I    +TFG+LL    
Sbjct: 333 AARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLL---- 388

Query: 359 TMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAM 538
                               S +FVG++L+DMY      E    VF  ++E + V WNA+
Sbjct: 389 -------------------KSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAI 429

Query: 539 ISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVI 646
           I G+  N    +A+  FR M+V   +PD VT   V+
Sbjct: 430 IVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVL 465


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  158 bits (400), Expect = 2e-36
 Identities = 91/257 (35%), Positives = 139/257 (54%), Gaps = 2/257 (0%)
 Frame = +2

Query: 2   QIVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDC 181
           +I+ +     + + + L+ +Y KC C D AR +  RM   + F+W+ LI+  TK G++D 
Sbjct: 40  RILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDE 99

Query: 182 ARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAE 358
           A  LF S        WNS++ G+ +    EE+LE F +M  E    +E++FGS L  CA 
Sbjct: 100 AARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAG 159

Query: 359 TMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAM 538
            M L  G Q+H+   K    + V++GSAL+DMYS       A  VF+ + E NLV WN++
Sbjct: 160 LMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSL 219

Query: 539 ISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLS- 715
           I+ +  N    +A+  F  MM   + PD VT + V+           G Q+HA   K + 
Sbjct: 220 ITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNK 279

Query: 716 FESNIVVGSALIDMYAK 766
           F  ++V+G+AL+DMYAK
Sbjct: 280 FRDDLVLGNALVDMYAK 296



 Score =  131 bits (330), Expect = 2e-28
 Identities = 79/223 (35%), Positives = 120/223 (53%), Gaps = 8/223 (3%)
 Frame = +2

Query: 2   QIVKSGLHRNVLV-GSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVD 178
           ++VK+   R+ LV G+ LV +YAKC   + AR V  RM   +  S + +++ Y +   V 
Sbjct: 273 RVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVK 332

Query: 179 CARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCA 355
            AR +F     +++  WN+LI GY + G +EEAL  F+ ++ E I    +TFG+LL  CA
Sbjct: 333 AARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACA 392

Query: 356 ETMGLRYGEQLHSQTIKLGI------HSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPN 517
               L  G Q H+  +K G        S +FVG++L+DMY      E    VF  ++E +
Sbjct: 393 NLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERD 452

Query: 518 LVLWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVI 646
            V WNA+I G+  N    +A+  FR M+V   +PD VT   V+
Sbjct: 453 CVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVL 495



 Score =  114 bits (286), Expect = 3e-23
 Identities = 81/256 (31%), Positives = 122/256 (47%), Gaps = 39/256 (15%)
 Frame = +2

Query: 116 SVDDFSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKE 295
           S D +  S LI  Y+K G V CA  +F     +++  WNSLI  Y + G   EALE F  
Sbjct: 179 STDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVR 238

Query: 296 MESEGIKGDEFTFGSLL-LCAETMGLRYGEQLHSQTIKLG-IHSSVFVGSALVDMYSS-- 463
           M   G++ DE T  S++  CA    L+ G Q+H++ +K       + +G+ALVDMY+   
Sbjct: 239 MMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCS 298

Query: 464 ---------------NLDCESAMS--------------VFNSIQEPNLVLWNAMISGFGL 556
                          N+  E++M               +F+ + + N+V WNA+I+G+  
Sbjct: 299 KVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQ 358

Query: 557 NNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSF------ 718
           N  + +A+  FRL+  + I P   TF  ++           GRQ H    K  F      
Sbjct: 359 NGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGA 418

Query: 719 ESNIVVGSALIDMYAK 766
           ES+I VG++LIDMY K
Sbjct: 419 ESDIFVGNSLIDMYMK 434


>ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
           gi|449523485|ref|XP_004168754.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  157 bits (397), Expect = 4e-36
 Identities = 91/256 (35%), Positives = 140/256 (54%), Gaps = 2/256 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           I+KS       + + L+ +Y KCGC D AR +  RM   + FSW+ +I  +TK G++D A
Sbjct: 45  IIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDA 104

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAET 361
             +F+         WNS+I G+ + G  +EAL  F +M   G   +E++FGS L  CA  
Sbjct: 105 VHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGL 164

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
             L+ G Q+HS   +    S V++GSALVDMYS     E A SVF+ +   + V WN++I
Sbjct: 165 QDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLI 224

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKL-SF 718
           + +  N    +A+  F  M+   + PD VT + V+           G+Q+HA   K   F
Sbjct: 225 TCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEF 284

Query: 719 ESNIVVGSALIDMYAK 766
            +++++G+AL+DMYAK
Sbjct: 285 RNDLILGNALLDMYAK 300



 Score =  125 bits (315), Expect = 1e-26
 Identities = 79/223 (35%), Positives = 115/223 (51%), Gaps = 8/223 (3%)
 Frame = +2

Query: 2   QIVKSGLHRNVLV-GSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVD 178
           ++VK    RN L+ G+ L+ +YAKC   + AR +   M      S + +++ Y K   V 
Sbjct: 277 RVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVK 336

Query: 179 CARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCA 355
            AR +F +  VK +  WN+LI G  + G +EEAL  F+ ++ E +    +TFG+LL  CA
Sbjct: 337 VARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACA 396

Query: 356 ETMGLRYGEQLHSQTIKLGIH------SSVFVGSALVDMYSSNLDCESAMSVFNSIQEPN 517
               L+ G Q HS  +K G        S VFVG++L+DMY      E+   VF  + E +
Sbjct: 397 NLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKD 456

Query: 518 LVLWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVI 646
            V WNAMI G+  N    KA+  F  M+     PD VT   V+
Sbjct: 457 CVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVL 499



 Score =  106 bits (264), Expect = 1e-20
 Identities = 76/264 (28%), Positives = 135/264 (51%), Gaps = 40/264 (15%)
 Frame = +2

Query: 95  SVVSRMDSVDD-FSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDE 271
           S+V R + + D +  S L+  Y+K G V+ A+++FD   V+S   WNSLI  Y + G  +
Sbjct: 175 SLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVD 234

Query: 272 EALETFKEMESEGIKGDEFTFGSLL-LCAETMGLRYGEQLHSQTIKLG-IHSSVFVGSAL 445
           EAL+ F EM   G++ DE T  S++  CA    ++ G+Q+H++ +K     + + +G+AL
Sbjct: 235 EALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNAL 294

Query: 446 VDMYSS-----------------NLDCESAMS--------------VFNSIQEPNLVLWN 532
           +DMY+                  ++  E++M               +F+++   +++ WN
Sbjct: 295 LDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWN 354

Query: 533 AMISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKL 712
           A+I+G   N  + +A+  FRL+  + + P   TF  +++          GRQ H+   K 
Sbjct: 355 ALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKH 414

Query: 713 SF------ESNIVVGSALIDMYAK 766
            F      +S++ VG++LIDMY K
Sbjct: 415 GFRFQYGEDSDVFVGNSLIDMYMK 438


>ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498836|gb|AES80039.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  157 bits (396), Expect = 5e-36
 Identities = 89/242 (36%), Positives = 128/242 (52%), Gaps = 3/242 (1%)
 Frame = +2

Query: 50  LVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLW 229
           L++  +K G  + AR +  +M   D++SW+ +I+ Y   G +  AR LFD    KS   W
Sbjct: 71  LLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITW 130

Query: 230 NSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLLCAETMGL-RYGEQLHSQTIK 406
           +S+I GY + G   EA + F+ M  EG K  +FT GS+L    ++GL + GE +H   +K
Sbjct: 131 SSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVK 190

Query: 407 LGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQ--EPNLVLWNAMISGFGLNNLDYKAV 580
            G   +VFV + LVDMY+       A  +F  ++    N VLW AM++G+  N   YKAV
Sbjct: 191 NGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAV 250

Query: 581 NAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFESNIVVGSALIDMY 760
             FR M  Q +  +  TF  ++           G QVH    K  F SN+ V SAL+DMY
Sbjct: 251 EFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMY 310

Query: 761 AK 766
           AK
Sbjct: 311 AK 312



 Score =  127 bits (318), Expect = 5e-27
 Identities = 75/255 (29%), Positives = 136/255 (53%), Gaps = 1/255 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           +VK+G   NV V + LV +YAKC C   A  +   ++                       
Sbjct: 188 VVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLE----------------------- 224

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLL-CAET 361
                 F+ K+  LW +++ GY + G   +A+E F+ M ++G++ +++TF ++L  C+  
Sbjct: 225 ------FDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSV 278

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
           +   +GEQ+H   +K G  S+V+V SALVDMY+   D ++A ++  ++++ ++V WN+++
Sbjct: 279 LARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLM 338

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFE 721
            GF  + L+ +A+  F+ M  + ++ D  TF  V++           + VH L  K  FE
Sbjct: 339 VGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLN--CCVVGSINPKSVHGLIIKTGFE 396

Query: 722 SNIVVGSALIDMYAK 766
           +  +V +AL+DMYAK
Sbjct: 397 NYKLVSNALVDMYAK 411



 Score =  120 bits (300), Expect = 7e-25
 Identities = 76/254 (29%), Positives = 122/254 (48%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           IVKSG   NV V S LV +YAKCG   +A++++                           
Sbjct: 291 IVKSGFGSNVYVQSALVDMYAKCGDLKNAKNML--------------------------- 323

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLLCAETM 364
               ++ E   +  WNSL+ G++  GL+EEAL  FK M    +K D++TF S+L C   +
Sbjct: 324 ----ETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC-VV 378

Query: 365 GLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMIS 544
           G    + +H   IK G  +   V +ALVDMY+   D + A +VF  + E +++ W ++++
Sbjct: 379 GSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVT 438

Query: 545 GFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFES 724
           G+  NN   +++  F  M V  + PD    + ++           G+QVH    K     
Sbjct: 439 GYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRW 498

Query: 725 NIVVGSALIDMYAK 766
           +  V ++L+ MYAK
Sbjct: 499 SQSVYNSLVAMYAK 512



 Score = 99.8 bits (247), Expect = 9e-19
 Identities = 55/167 (32%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
 Frame = +2

Query: 137 SVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIK 316
           + L+  Y K G +DCA  +F+    K +  W SL+ GY +    EE+L+ F +M   G+ 
Sbjct: 403 NALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVN 462

Query: 317 GDEFTFGSLL-LCAETMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSV 493
            D+F   S+L  CAE   L +G+Q+H   IK G+  S  V ++LV MY+     + A ++
Sbjct: 463 PDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAI 522

Query: 494 FNSIQEPNLVLWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTF 634
           F S+Q  +++ W A+I G+  N     ++  +  M+    RPD +TF
Sbjct: 523 FVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITF 569



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
 Frame = +2

Query: 134 WSVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGI 313
           ++ L+A Y K G +D A A+F S +VK +  W ++I GY + G    +L+ +  M S G 
Sbjct: 503 YNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGT 562

Query: 314 KGDEFTF-GSLLLCAETMGLRYGEQLHSQTIKL-GIHSSVFVGSALVDMYSSNLDCESAM 487
           + D  TF G L  C+    +  G +   Q  K+ GI       + ++D++  +   + A 
Sbjct: 563 RPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAK 622

Query: 488 SVFNSIQ-EPNLVLWNAMISGF----GLNNLDYKAVNAFRL 595
            + + +  +P+  +W +++S       L   +  A N F L
Sbjct: 623 QLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFEL 663


>ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citrus clementina]
           gi|568821173|ref|XP_006465064.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like [Citrus sinensis]
           gi|557534290|gb|ESR45408.1| hypothetical protein
           CICLE_v10000448mg [Citrus clementina]
          Length = 705

 Score =  156 bits (394), Expect = 8e-36
 Identities = 89/258 (34%), Positives = 141/258 (54%), Gaps = 3/258 (1%)
 Frame = +2

Query: 2   QIVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDC 181
           +I+KS     + + + L+ +YAKCGC   AR V  +M + + F+W+ +I    K G++D 
Sbjct: 44  RIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD 103

Query: 182 ARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAE 358
           A  LF S   +    WNS++ G+ +     EAL  F +M SE    +E++FGS L  CA 
Sbjct: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALNEYSFGSALSACAG 163

Query: 359 TMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAM 538
           ++  + G Q+H+   K    S V++GSAL+DMY        A  VF+ ++E N+V WN++
Sbjct: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223

Query: 539 ISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHA--LACKL 712
           I+ +  N     A+  F  MM   I PD VT + V+           G Q+HA  + C+ 
Sbjct: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE- 282

Query: 713 SFESNIVVGSALIDMYAK 766
              +++V+G+AL+DMYAK
Sbjct: 283 KLRNDLVLGNALVDMYAK 300



 Score =  129 bits (325), Expect = 8e-28
 Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 7/216 (3%)
 Frame = +2

Query: 20  LHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCARALFD 199
           L  ++++G+ LV +YAKCG  + AR V  RM   +  S + +++ Y K   V  AR +F 
Sbjct: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343

Query: 200 SFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAETMGLRY 376
               +++  WN+LI GY + G +EEAL  F+ ++ E +    +TFG+LL  CA    L+ 
Sbjct: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403

Query: 377 GEQLHSQTIKLGI------HSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAM 538
           G Q H+  +K G+       S +FVG++L+DMY      E    +F ++ E + V WNAM
Sbjct: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEEGCRIFETMVERDWVSWNAM 463

Query: 539 ISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVI 646
           I G   N    +A+  F+ M++   +PD VT   V+
Sbjct: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499



 Score =  114 bits (284), Expect = 5e-23
 Identities = 83/256 (32%), Positives = 126/256 (49%), Gaps = 39/256 (15%)
 Frame = +2

Query: 116 SVDDFSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKE 295
           S D +  S LI  Y K G V CAR +FD    ++I  WNSLI  Y + G   +ALE F  
Sbjct: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242

Query: 296 MESEGIKGDEFTFGSLL-LCAETMGLRYGEQLHSQTIKLG-IHSSVFVGSALVDMYSS-- 463
           M + GI+ DE T  S++  CA     + G Q+H++ ++   + + + +G+ALVDMY+   
Sbjct: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302

Query: 464 ---------------NLDCESAMS--------------VFNSIQEPNLVLWNAMISGFGL 556
                          N+  E++M               +F  + E N+V WNA+I+G+  
Sbjct: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362

Query: 557 NNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACK--LSF---- 718
           N  + +A+  FRL+  + + P   TF  +++          GRQ H    K  L F    
Sbjct: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422

Query: 719 ESNIVVGSALIDMYAK 766
           ES+I VG++LIDMY K
Sbjct: 423 ESDIFVGNSLIDMYMK 438


>ref|XP_004492675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cicer arietinum]
          Length = 785

 Score =  155 bits (391), Expect = 2e-35
 Identities = 90/253 (35%), Positives = 134/253 (52%), Gaps = 3/253 (1%)
 Frame = +2

Query: 17  GLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCARALF 196
           G ++++   + L++  +K G  D AR +  +M   D++SW+ +I+ Y   G +  AR LF
Sbjct: 34  GSYQSIYHSNQLLNGLSKSGRVDDARKLFDKMPLKDEYSWNTMISGYVNVGKLVEARELF 93

Query: 197 DSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLLCAETMGL-R 373
           D F  +S   W+SLI GY + G   EA + F+ M  EG K  ++T GS+L    ++GL +
Sbjct: 94  DGFSCRSSITWSSLISGYCKFGCKVEAFDLFRSMRLEGQKPTQYTLGSVLRVCSSLGLIQ 153

Query: 374 YGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSI--QEPNLVLWNAMISG 547
            GE +H   +K G  S+VFV + LVDMY+       A  +F  +     N VLW AM++G
Sbjct: 154 TGELIHGYVVKNGFESNVFVVTGLVDMYAKCKCILEAEFLFKGLAFDRKNHVLWTAMVTG 213

Query: 548 FGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFESN 727
           +  N   YKAV  FR M  Q +  +  TF  ++           G QVH    +  F  N
Sbjct: 214 YAQNGDGYKAVEFFRYMHTQGVVSNQYTFPTILTACSSVSARCFGEQVHGCIVRSGFGCN 273

Query: 728 IVVGSALIDMYAK 766
           + V SAL+DMYAK
Sbjct: 274 VYVQSALVDMYAK 286



 Score =  127 bits (319), Expect = 4e-27
 Identities = 79/255 (30%), Positives = 134/255 (52%), Gaps = 1/255 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           +VK+G   NV V + LV +YAKC C                    +L AE+   G     
Sbjct: 162 VVKNGFESNVFVVTGLVDMYAKCKC--------------------ILEAEFLFKGL---- 197

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLLCAETM 364
                +F+ K+  LW +++ GY + G   +A+E F+ M ++G+  +++TF ++L    ++
Sbjct: 198 -----AFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHTQGVVSNQYTFPTILTACSSV 252

Query: 365 GLR-YGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
             R +GEQ+H   ++ G   +V+V SALVDMY+   D  SA  V  ++++ ++V WN+MI
Sbjct: 253 SARCFGEQVHGCIVRSGFGCNVYVQSALVDMYAKCGDLSSAKRVLETMEDDDIVSWNSMI 312

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFE 721
            GF  +  + +A+  F+ M  + ++ D  TF  +++           R VH L  K  FE
Sbjct: 313 VGFVRHGFEEEALLLFKSMHGRNMKIDDYTFPSILNCCIVGSIDP--RSVHCLIIKTGFE 370

Query: 722 SNIVVGSALIDMYAK 766
           +  +V +AL+DMYAK
Sbjct: 371 NYKLVSNALVDMYAK 385



 Score =  118 bits (296), Expect = 2e-24
 Identities = 76/254 (29%), Positives = 119/254 (46%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           IV+SG   NV V S LV +YAKCG   S                               A
Sbjct: 265 IVRSGFGCNVYVQSALVDMYAKCGDLSS-------------------------------A 293

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLLCAETM 364
           + + ++ E   I  WNS+I G++  G +EEAL  FK M    +K D++TF S+L C   +
Sbjct: 294 KRVLETMEDDDIVSWNSMIVGFVRHGFEEEALLLFKSMHGRNMKIDDYTFPSILNCC-IV 352

Query: 365 GLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMIS 544
           G      +H   IK G  +   V +ALVDMY+   D  SA +VF  + E +++ W ++++
Sbjct: 353 GSIDPRSVHCLIIKTGFENYKLVSNALVDMYAKTWDMNSAYTVFEKMLEKDVISWTSLVT 412

Query: 545 GFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFES 724
           G+  N    +++  F  M V  + PD    + ++           G+QVH+   K    +
Sbjct: 413 GYAQNGSHEESLKTFCDMRVAGVNPDQFIVASILSACAELTLLEFGKQVHSDFIKSGLRA 472

Query: 725 NIVVGSALIDMYAK 766
           +  V ++L+ MYAK
Sbjct: 473 SPSVDNSLVAMYAK 486



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           I+K+G     LV + LV +YAK    +SA +V  +M   D  S                 
Sbjct: 364 IIKTGFENYKLVSNALVDMYAKTWDMNSAYTVFEKMLEKDVIS----------------- 406

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAET 361
                         W SL+ GY + G  EE+L+TF +M   G+  D+F   S+L  CAE 
Sbjct: 407 --------------WTSLVTGYAQNGSHEESLKTFCDMRVAGVNPDQFIVASILSACAEL 452

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
             L +G+Q+HS  IK G+ +S  V ++LV MY+     + A ++F S+Q P+++ W A+I
Sbjct: 453 TLLEFGKQVHSDFIKSGLRASPSVDNSLVAMYAKCGCLDDADAIFVSMQVPDVITWTALI 512

Query: 542 SGFGLNNLDYKAVNA 586
            G+  N L +   +A
Sbjct: 513 VGYAQNGLLFACSHA 527


>ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543299|gb|EEF44831.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 628

 Score =  154 bits (390), Expect = 2e-35
 Identities = 87/257 (33%), Positives = 135/257 (52%), Gaps = 2/257 (0%)
 Frame = +2

Query: 2   QIVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDC 181
           +I+K+     V + + L+  Y KCGCFD AR +  +M   + FSW+ +++   K G++D 
Sbjct: 44  RIIKTQFAYEVFIQNRLIDAYGKCGCFDDARKIFDQMPEKNVFSWNAIVSTLVKSGFLDE 103

Query: 182 ARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGS-LLLCAE 358
              LF S        WNSLI G+ +    EEAL  F +M  +G   +E+TFGS L  CA 
Sbjct: 104 GARLFVSMPEPDQCSWNSLIAGFAQHDRFEEALNYFVKMHRKGFVLNEYTFGSGLSACAG 163

Query: 359 TMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAM 538
              L+ G Q+H   +K      V++GSAL+D+YS     + A  VF+ + E N+V WN++
Sbjct: 164 LKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCGFVDCAQRVFDGMMERNVVSWNSL 223

Query: 539 ISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKL-S 715
           I+ +  N    +A+  F  MM     PD VT + V+           G ++HA   K   
Sbjct: 224 ITCYEQNGPSREALEIFMRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDK 283

Query: 716 FESNIVVGSALIDMYAK 766
              ++++ +AL+DMYAK
Sbjct: 284 LRDDLILSNALVDMYAK 300



 Score =  134 bits (337), Expect = 3e-29
 Identities = 77/216 (35%), Positives = 116/216 (53%), Gaps = 7/216 (3%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           + +  L  ++++ + LV +YAKCG  + AR V  RM   +  S + +++ Y K   V  A
Sbjct: 279 VKRDKLRDDLILSNALVDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAA 338

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAET 361
           R LF     +++  WN+LI GY + G +EEAL  F+ ++ E I    +TFG+LL  CA  
Sbjct: 339 RLLFTKMIERNVVSWNALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANL 398

Query: 362 MGLRYGEQLHSQTIKLGI------HSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLV 523
             L+ G Q H+  +K G        S VFVG+AL+DMY      E    +F ++ E + V
Sbjct: 399 ADLQLGRQAHAHVLKHGFRFQYGEESDVFVGNALIDMYMKCGSVEEGCRIFENMVERDYV 458

Query: 524 LWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDIVT 631
            WNAMI G+  N    +A+  FR M+    +PD VT
Sbjct: 459 SWNAMIVGYAQNGYGMEALGLFRKMLASGEKPDHVT 494



 Score =  116 bits (291), Expect = 7e-24
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 39/255 (15%)
 Frame = +2

Query: 119 VDDFSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEM 298
           +D +  S LI  Y+K G+VDCA+ +FD    +++  WNSLI  Y + G   EALE F  M
Sbjct: 184 LDVYMGSALIDIYSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRM 243

Query: 299 ESEGIKGDEFTFGSLL-LCAETMGLRYGEQLHSQTIKLG-IHSSVFVGSALVDMYSS--- 463
              G + DE T  S++  CA     + G ++H+  +K   +   + + +ALVDMY+    
Sbjct: 244 MESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGR 303

Query: 464 --------------NLDCESAMS--------------VFNSIQEPNLVLWNAMISGFGLN 559
                         N+  E++M               +F  + E N+V WNA+I+G+  N
Sbjct: 304 INEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQN 363

Query: 560 NLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSF------E 721
             + +A+  FR++  + I P   TF  +++          GRQ HA   K  F      E
Sbjct: 364 GENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGEE 423

Query: 722 SNIVVGSALIDMYAK 766
           S++ VG+ALIDMY K
Sbjct: 424 SDVFVGNALIDMYMK 438


>ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329643|gb|EFH60062.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 697

 Score =  154 bits (389), Expect = 3e-35
 Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 2/256 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           ++KSG    V + + L+  YAKCG  +  R +  +M   + F+W+ ++   TK G++D A
Sbjct: 46  VIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEA 105

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGS-LLLCAET 361
            +LF S   +    WNS++ G+ +    EEAL  F  M  EG   +E+TF S L  C+  
Sbjct: 106 DSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGL 165

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
             +  G Q+HS   K    S V++GSALVDMYS   +   A  VF+ + + N+V WN++I
Sbjct: 166 NDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLI 225

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKL-SF 718
           + +  N    +A+  F++M+   + PD VT + VI           G++VHA   K+   
Sbjct: 226 TCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKL 285

Query: 719 ESNIVVGSALIDMYAK 766
            ++I++ +A +DMYAK
Sbjct: 286 RNDIILSNAFVDMYAK 301



 Score =  111 bits (277), Expect = 3e-22
 Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 7/216 (3%)
 Frame = +2

Query: 20  LHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCARALFD 199
           L  ++++ +  V +YAKC     AR +   M   +  + + +++ Y        AR +F 
Sbjct: 285 LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFT 344

Query: 200 SFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAETMGLRY 376
               +++  WN+LI GY + G +EEAL  F  ++ E +    +TF ++L  CA+   L  
Sbjct: 345 KMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHL 404

Query: 377 GEQLHSQTIKLGI------HSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAM 538
           G Q H   +K G          +FVG++L+DMY      E    VF  + E + V WNAM
Sbjct: 405 GMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAM 464

Query: 539 ISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVI 646
           I GF  N    +A+  FR M+    +PD +T   V+
Sbjct: 465 IIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVL 500



 Score =  101 bits (251), Expect = 3e-19
 Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 39/254 (15%)
 Frame = +2

Query: 122 DDFSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEME 301
           D +  S L+  Y+K G V+ A+ +FD    +++  WNSLI  Y + G   EAL+ F+ M 
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVML 245

Query: 302 SEGIKGDEFTFGSLL-LCAETMGLRYGEQLHSQTIKLG-IHSSVFVGSALVDMYSS---- 463
              ++ DE T  S++  CA    ++ G+++H++ +K+  + + + + +A VDMY+     
Sbjct: 246 ESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRI 305

Query: 464 -------------NLDCESAMS--------------VFNSIQEPNLVLWNAMISGFGLNN 562
                        N+  E++M               +F  + E N+V WNA+I+G+  N 
Sbjct: 306 KEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365

Query: 563 LDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSF------ES 724
            + +A++ F L+  + + P   TF+ ++           G Q H    K  F      E 
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEED 425

Query: 725 NIVVGSALIDMYAK 766
           +I VG++LIDMY K
Sbjct: 426 DIFVGNSLIDMYVK 439


>gb|ESW09789.1| hypothetical protein PHAVU_009G156000g [Phaseolus vulgaris]
          Length = 705

 Score =  153 bits (387), Expect = 5e-35
 Identities = 89/257 (34%), Positives = 139/257 (54%), Gaps = 2/257 (0%)
 Frame = +2

Query: 2   QIVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDC 181
           +I+K+     + + + LV  Y KCGCF+ AR V   M   + FS++ +++ +TK G +D 
Sbjct: 44  RIIKAQFSSEIFIQNRLVDAYGKCGCFEEARKVFVHMPLRNTFSYNAILSVFTKFGKLDE 103

Query: 182 ARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAE 358
           A ++F S        WN+++ G+ +    EEAL+ F +M SE    +E++FGS L  CA 
Sbjct: 104 ALSVFKSMPEPDQCSWNAMVSGFAQHDRFEEALKFFLDMHSEDFVVNEYSFGSALSACAG 163

Query: 359 TMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAM 538
              L  G Q+H+   K      V++GSALVDMYS       A   F+ +   N+V WN++
Sbjct: 164 LTDLNVGVQIHALISKCRYLLDVYMGSALVDMYSKCGVVTCAQRAFDEMVVRNIVSWNSL 223

Query: 539 ISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKL-S 715
           I+ +  N    KA+  F  MM  R+ PD +T + V+           G Q+HA   K   
Sbjct: 224 ITCYEQNGPAQKALEIFVRMMDNRVEPDEITMASVVSACASLSATREGLQIHARVIKRDK 283

Query: 716 FESNIVVGSALIDMYAK 766
           F +++V+G+AL+DMYAK
Sbjct: 284 FRNDLVLGNALVDMYAK 300



 Score =  126 bits (316), Expect = 9e-27
 Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 8/237 (3%)
 Frame = +2

Query: 2   QIVKSGLHRNVLV-GSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVD 178
           +++K    RN LV G+ LV +YAKC     AR V  RM   D  S + +++ Y +   V 
Sbjct: 277 RVIKRDKFRNDLVLGNALVDMYAKCKRVREARLVFDRMPVRDVVSETSMVSGYARAASVK 336

Query: 179 CARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCA 355
            AR +F     +++  WN+LI GY + G +EEA+  F  ++ + +    +TFG+LL  CA
Sbjct: 337 AARLMFSKMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRDSLWPTHYTFGNLLNACA 396

Query: 356 ETMGLRYGEQLHSQTIKLGI------HSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPN 517
               L+ G Q H+  +K G        S +FVG++L+DMY      E    +F  + E +
Sbjct: 397 NLADLKLGRQAHTHILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLIFEHMVERD 456

Query: 518 LVLWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQ 688
           +V WNAMI G+  N     A+  FR M++   +PD VT   V+           GR+
Sbjct: 457 IVSWNAMIVGYAQNGYGTDALEIFRKMLLSGEKPDHVTMIGVLSACSHAGLVEEGRR 513



 Score =  111 bits (278), Expect = 2e-22
 Identities = 79/255 (30%), Positives = 120/255 (47%), Gaps = 39/255 (15%)
 Frame = +2

Query: 119 VDDFSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEM 298
           +D +  S L+  Y+K G V CA+  FD   V++I  WNSLI  Y + G  ++ALE F  M
Sbjct: 184 LDVYMGSALVDMYSKCGVVTCAQRAFDEMVVRNIVSWNSLITCYEQNGPAQKALEIFVRM 243

Query: 299 ESEGIKGDEFTFGSLL-LCAETMGLRYGEQLHSQTIKLG-IHSSVFVGSALVDMYSS--- 463
               ++ DE T  S++  CA     R G Q+H++ IK     + + +G+ALVDMY+    
Sbjct: 244 MDNRVEPDEITMASVVSACASLSATREGLQIHARVIKRDKFRNDLVLGNALVDMYAKCKR 303

Query: 464 ----------------------------NLDCESAMSVFNSIQEPNLVLWNAMISGFGLN 559
                                           ++A  +F+ + E N+V WNA+I+G+  N
Sbjct: 304 VREARLVFDRMPVRDVVSETSMVSGYARAASVKAARLMFSKMMERNVVSWNALIAGYTQN 363

Query: 560 NLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSF------E 721
             + +AV  F L+    + P   TF  +++          GRQ H    K  F      E
Sbjct: 364 GENEEAVRLFLLLKRDSLWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFQSGEE 423

Query: 722 SNIVVGSALIDMYAK 766
           S+I VG++LIDMY K
Sbjct: 424 SDIFVGNSLIDMYMK 438


>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like isoform X1 [Glycine max]
           gi|571497773|ref|XP_006594017.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like isoform X2 [Glycine max]
          Length = 747

 Score =  152 bits (385), Expect = 9e-35
 Identities = 90/255 (35%), Positives = 130/255 (50%), Gaps = 1/255 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           +VK G    V VGS LV +Y+K G    AR     M   +   ++ LIA   +   ++ +
Sbjct: 168 VVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDS 227

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLL-CAET 361
           R LF   + K    W ++I G+ + GLD EA++ F+EM  E ++ D++TFGS+L  C   
Sbjct: 228 RQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGV 287

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
           M L+ G+Q+H+  I+     ++FVGSALVDMY      +SA +VF  +   N+V W AM+
Sbjct: 288 MALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAML 347

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFE 721
            G+G N    +AV  F  M    I PD  T   VI           G Q H  A      
Sbjct: 348 VGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLI 407

Query: 722 SNIVVGSALIDMYAK 766
           S I V +AL+ +Y K
Sbjct: 408 SFITVSNALVTLYGK 422



 Score =  129 bits (324), Expect = 1e-27
 Identities = 85/287 (29%), Positives = 134/287 (46%), Gaps = 33/287 (11%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           I+K+  +  + + + LVS YAK      AR V  +M   + +SW+ L++ Y+K   +   
Sbjct: 35  IIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEM 94

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEG-IKGDEFTFGSLLLCAET 361
             +F +   + +  WNSLI  Y   G   ++++ +  M   G    +     ++L+ A  
Sbjct: 95  ERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASK 154

Query: 362 MG-LRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSN------------------------ 466
            G +  G Q+H   +K G  S VFVGS LVDMYS                          
Sbjct: 155 QGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTL 214

Query: 467 ----LDC---ESAMSVFNSIQEPNLVLWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDI 625
               + C   E +  +F  +QE + + W AMI+GF  N LD +A++ FR M ++ +  D 
Sbjct: 215 IAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQ 274

Query: 626 VTFSRVIDXXXXXXXXXGGRQVHALACKLSFESNIVVGSALIDMYAK 766
            TF  V+           G+QVHA   +  ++ NI VGSAL+DMY K
Sbjct: 275 YTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCK 321



 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 1/230 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           I+++    N+ VGS LV +Y KC    SA +V                            
Sbjct: 300 IIRTDYQDNIFVGSALVDMYCKCKSIKSAETV---------------------------- 331

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLL-CAET 361
              F     K++  W +++ GY + G  EEA++ F +M++ GI+ D+FT GS++  CA  
Sbjct: 332 ---FRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANL 388

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
             L  G Q H + +  G+ S + V +ALV +Y      E +  +F+ +   + V W A++
Sbjct: 389 ASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALV 448

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQV 691
           SG+       + +  F  M+    +PD VTF  V+           G Q+
Sbjct: 449 SGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQI 498


>ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251150|gb|AEC06244.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 697

 Score =  152 bits (385), Expect = 9e-35
 Identities = 84/256 (32%), Positives = 140/256 (54%), Gaps = 2/256 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           ++KSG    + + + L+  Y+KCG  +  R V  +M   + ++W+ ++   TK G++D A
Sbjct: 46  VIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEA 105

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAET 361
            +LF S   +    WNS++ G+ +    EEAL  F  M  EG   +E++F S+L  C+  
Sbjct: 106 DSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGL 165

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
             +  G Q+HS   K    S V++GSALVDMYS   +   A  VF+ + + N+V WN++I
Sbjct: 166 NDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKL-SF 718
           + F  N    +A++ F++M+  R+ PD VT + VI           G++VH    K    
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285

Query: 719 ESNIVVGSALIDMYAK 766
            ++I++ +A +DMYAK
Sbjct: 286 RNDIILSNAFVDMYAK 301



 Score =  110 bits (276), Expect = 4e-22
 Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 8/223 (3%)
 Frame = +2

Query: 2   QIVKSGLHRN-VLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVD 178
           ++VK+   RN +++ +  V +YAKC     AR +   M   +  + + +I+ Y       
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337

Query: 179 CARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCA 355
            AR +F     +++  WN+LI GY + G +EEAL  F  ++ E +    ++F ++L  CA
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397

Query: 356 ETMGLRYGEQLHSQTIKLGI------HSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPN 517
           +   L  G Q H   +K G          +FVG++L+DMY      E    VF  + E +
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457

Query: 518 LVLWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVI 646
            V WNAMI GF  N    +A+  FR M+    +PD +T   V+
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVL 500



 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 39/254 (15%)
 Frame = +2

Query: 122 DDFSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEME 301
           D +  S L+  Y+K G V+ A+ +FD    +++  WNSLI  + + G   EAL+ F+ M 
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245

Query: 302 SEGIKGDEFTFGSLL-LCAETMGLRYGEQLHSQTIKLG-IHSSVFVGSALVDMYSS---- 463
              ++ DE T  S++  CA    ++ G+++H + +K   + + + + +A VDMY+     
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305

Query: 464 -------------NLDCESAMS--------------VFNSIQEPNLVLWNAMISGFGLNN 562
                        N+  E++M               +F  + E N+V WNA+I+G+  N 
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365

Query: 563 LDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSF------ES 724
            + +A++ F L+  + + P   +F+ ++           G Q H    K  F      E 
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425

Query: 725 NIVVGSALIDMYAK 766
           +I VG++LIDMY K
Sbjct: 426 DIFVGNSLIDMYVK 439


>ref|XP_004239007.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Solanum lycopersicum]
          Length = 743

 Score =  152 bits (383), Expect = 2e-34
 Identities = 92/256 (35%), Positives = 129/256 (50%), Gaps = 1/256 (0%)
 Frame = +2

Query: 2   QIVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDC 181
           QIVK G    V VGS LV +YAK G    A  V + +   +   ++ +I  + + G V  
Sbjct: 163 QIVKWGFELYVFVGSPLVDMYAKAGLIYEAEKVFNELPERNVVMYNTMIMGFLRSGMVRE 222

Query: 182 ARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLL-CAE 358
           +++LF     K    W ++I G  + GLD EAL  F+ M  EG+  D+FTFGS+L  C  
Sbjct: 223 SKSLFQDMPEKDSISWTTMITGLTQNGLDREALVLFRRMRLEGLPIDQFTFGSILTACGG 282

Query: 359 TMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAM 538
              +  G+QLH+  ++     +VFVGSALVDMYS   + + A S F+ +   N+V W AM
Sbjct: 283 LQAIEEGKQLHAYIVRTYHSENVFVGSALVDMYSKCRNIKYAGSTFSRMPNKNIVSWTAM 342

Query: 539 ISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSF 718
           + G+G N    +AV AF  M    + PD  T   VI           G Q H  A     
Sbjct: 343 VVGYGQNGFSEEAVKAFCDMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHGRALVSGL 402

Query: 719 ESNIVVGSALIDMYAK 766
            S I V +AL+ +Y K
Sbjct: 403 ISFITVSNALVTLYGK 418



 Score =  127 bits (320), Expect = 3e-27
 Identities = 85/272 (31%), Positives = 129/272 (47%), Gaps = 33/272 (12%)
 Frame = +2

Query: 50  LVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLW 229
           L++ Y+K      AR V   +   + FSW+ +++ Y+K G +     +F+    +    W
Sbjct: 46  LINAYSKLNNTGYARQVFEEIPQPNQFSWNTVLSVYSKCGNISRMLDVFNRMPKRDGVSW 105

Query: 230 NSLIGGYLELGLDEEALETFKEM-ESEGIKGDEFTFGSLLLCAETMG-LRYGEQLHSQTI 403
           N +I GY   GL  +ALE +K M E  G+  +  TF ++L+ +   G +R   Q+H Q +
Sbjct: 106 NLIISGYASRGLAIDALEAYKLMLEDGGMSLNRITFSTMLILSSDNGWIRMSRQIHGQIV 165

Query: 404 KLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMISGF----------- 550
           K G    VFVGS LVDMY+       A  VFN + E N+V++N MI GF           
Sbjct: 166 KWGFELYVFVGSPLVDMYAKAGLIYEAEKVFNELPERNVVMYNTMIMGFLRSGMVRESKS 225

Query: 551 ------------------GL--NNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXX 670
                             GL  N LD +A+  FR M ++ +  D  TF  ++        
Sbjct: 226 LFQDMPEKDSISWTTMITGLTQNGLDREALVLFRRMRLEGLPIDQFTFGSILTACGGLQA 285

Query: 671 XXGGRQVHALACKLSFESNIVVGSALIDMYAK 766
              G+Q+HA   +     N+ VGSAL+DMY+K
Sbjct: 286 IEEGKQLHAYIVRTYHSENVFVGSALVDMYSK 317



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           IV++    NV VGS LV +Y+KC     A S  SRM +                      
Sbjct: 296 IVRTYHSENVFVGSALVDMYSKCRNIKYAGSTFSRMPN---------------------- 333

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLL-CAET 361
                    K+I  W +++ GY + G  EEA++ F +M+  G++ D+FT GS++  CA  
Sbjct: 334 ---------KNIVSWTAMVVGYGQNGFSEEAVKAFCDMQRNGVEPDDFTLGSVISSCANL 384

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
             L  G Q H + +  G+ S + V +ALV +Y      E + S+F+ +   + V W A++
Sbjct: 385 ASLEEGAQFHGRALVSGLISFITVSNALVTLYGKCGSIEDSHSLFDEMSVKDEVSWTALV 444

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVI 646
           SG+       + ++ +  M+   ++PD VTF  V+
Sbjct: 445 SGYAQFGKATETIDLYEKMLEHGLQPDGVTFVGVL 479


>ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana] gi|6850884|emb|CAB71047.1| putative protein
           [Arabidopsis thaliana] gi|332646643|gb|AEE80164.1|
           pentatricopeptide (PPR) repeat-containing protein
           [Arabidopsis thaliana]
          Length = 783

 Score =  152 bits (383), Expect = 2e-34
 Identities = 92/254 (36%), Positives = 137/254 (53%), Gaps = 2/254 (0%)
 Frame = +2

Query: 11  KSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCARA 190
           ++ LH N+L+G +     +K G  D AR +  +M   D+F+W+ +I  Y+    +  A  
Sbjct: 26  RTKLHSNLLLGDL-----SKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEK 80

Query: 191 LFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAETMG 367
           LF S  VK+   WN+LI GY + G   EA   F EM+S+GIK +E+T GS+L +C   + 
Sbjct: 81  LFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVL 140

Query: 368 LRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQ-EPNLVLWNAMIS 544
           L  GEQ+H  TIK G    V V + L+ MY+       A  +F +++ E N V W +M++
Sbjct: 141 LLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLT 200

Query: 545 GFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFES 724
           G+  N   +KA+  FR +  +  + +  TF  V+           G QVH    K  F++
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260

Query: 725 NIVVGSALIDMYAK 766
           NI V SALIDMYAK
Sbjct: 261 NIYVQSALIDMYAK 274



 Score =  114 bits (284), Expect = 5e-23
 Identities = 78/256 (30%), Positives = 115/256 (44%), Gaps = 2/256 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           IVKSG   N+ V S L+ +YAKC   +SA                               
Sbjct: 253 IVKSGFKTNIYVQSALIDMYAKCREMESA------------------------------- 281

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLLC--AE 358
           RAL +  EV  +  WNS+I G +  GL  EAL  F  M    +K D+FT  S+L C    
Sbjct: 282 RALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALS 341

Query: 359 TMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAM 538
              ++     H   +K G  +   V +ALVDMY+     +SA+ VF  + E +++ W A+
Sbjct: 342 RTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTAL 401

Query: 539 ISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSF 718
           ++G   N    +A+  F  M V  I PD +  + V+           G+QVH    K  F
Sbjct: 402 VTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGF 461

Query: 719 ESNIVVGSALIDMYAK 766
            S++ V ++L+ MY K
Sbjct: 462 PSSLSVNNSLVTMYTK 477



 Score =  102 bits (254), Expect = 1e-19
 Identities = 63/211 (29%), Positives = 112/211 (53%), Gaps = 3/211 (1%)
 Frame = +2

Query: 143 LIAEYTKHGYVDCARALFDSFE-VKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKG 319
           L+A Y +   +  A  LF++ E  K+   W S++ GY + G   +A+E F+++  EG + 
Sbjct: 166 LLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQS 225

Query: 320 DEFTFGSLLL-CAETMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVF 496
           +++TF S+L  CA     R G Q+H   +K G  ++++V SAL+DMY+   + ESA ++ 
Sbjct: 226 NQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALL 285

Query: 497 NSIQEPNLVLWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXX 676
             ++  ++V WN+MI G     L  +A++ F  M  + ++ D  T   +++         
Sbjct: 286 EGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEM 345

Query: 677 G-GRQVHALACKLSFESNIVVGSALIDMYAK 766
                 H L  K  + +  +V +AL+DMYAK
Sbjct: 346 KIASSAHCLIVKTGYATYKLVNNALVDMYAK 376



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 57/173 (32%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
 Frame = +2

Query: 137 SVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIK 316
           + L+  Y K G +D A  +F+    K +  W +L+ G    G  +EAL+ F  M   GI 
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT 427

Query: 317 GDEFTFGSLLLC-AETMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSV 493
            D+    S+L   AE   L +G+Q+H   IK G  SS+ V ++LV MY+     E A  +
Sbjct: 428 PDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVI 487

Query: 494 FNSIQEPNLVLWNAMISGFGLNNLDYKAVNAFRLM-MVQRIRPDIVTFSRVID 649
           FNS++  +L+ W  +I G+  N L   A   F  M  V  I P    ++ +ID
Sbjct: 488 FNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMID 540


>ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  151 bits (382), Expect = 2e-34
 Identities = 89/241 (36%), Positives = 133/241 (55%), Gaps = 2/241 (0%)
 Frame = +2

Query: 50  LVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLW 229
           ++S  +KCG  D AR +   M   D+ SW+ +I  Y   G ++ AR LF    ++S   W
Sbjct: 47  VLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITW 106

Query: 230 NSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAETMGLRYGEQLHSQTIK 406
           +SLI GY   G D EALE F EM+ EG + ++FT+GS+L +C+  + L  G+Q+H+  IK
Sbjct: 107 SSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIK 166

Query: 407 LGIHSSVFVGSALVDMYSSNLDCESAMSVFN-SIQEPNLVLWNAMISGFGLNNLDYKAVN 583
               S+ FV + LVDMY+       A  +F  +  + N VLW AM++G+  N   +KA+ 
Sbjct: 167 TQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIE 226

Query: 584 AFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFESNIVVGSALIDMYA 763
            FR M  + I  +  TF  ++           G QVH    +  F +N+ VGSAL+DMY+
Sbjct: 227 CFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYS 286

Query: 764 K 766
           K
Sbjct: 287 K 287



 Score =  125 bits (314), Expect = 2e-26
 Identities = 80/255 (31%), Positives = 131/255 (51%), Gaps = 2/255 (0%)
 Frame = +2

Query: 8   VKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCAR 187
           +K+    N  V + LV +YAKC C                    +L AEY          
Sbjct: 165 IKTQFDSNAFVVTGLVDMYAKCKC--------------------ILEAEY---------- 194

Query: 188 ALFD-SFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLL-CAET 361
            LF+ + + ++  LW +++ GY + G   +A+E F++M  EGI+ ++FTF S+L  C   
Sbjct: 195 -LFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSI 253

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
               +G Q+H   ++ G  ++VFVGSALVDMYS   D  +A  +  +++  + V WN+MI
Sbjct: 254 SACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMI 313

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFE 721
            G     L  +A++ FR+M ++ ++ D  T+  V++             VH+L  K  FE
Sbjct: 314 VGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFE 373

Query: 722 SNIVVGSALIDMYAK 766
           +  +V +AL+DMYAK
Sbjct: 374 AYKLVNNALVDMYAK 388



 Score =  121 bits (304), Expect = 2e-25
 Identities = 79/255 (30%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           IV+SG   NV VGS LV +Y+KCG   +                               A
Sbjct: 266 IVRSGFGANVFVGSALVDMYSKCGDLSN-------------------------------A 294

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLLCAE-T 361
           R + ++ EV     WNS+I G +  GL EEAL  F+ M    +K DEFT+ S+L C    
Sbjct: 295 RRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFV 354

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
           M +R    +HS  +K G  +   V +ALVDMY+     + A  VF  + + +++ W +++
Sbjct: 355 MDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLV 414

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFE 721
           +G   N    +A+  F  M +  I PD +  + V+           G+QVHA   K    
Sbjct: 415 TGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLG 474

Query: 722 SNIVVGSALIDMYAK 766
           S++ V ++L+ MYAK
Sbjct: 475 SSLSVDNSLVSMYAK 489



 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
 Frame = +2

Query: 137 SVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIK 316
           + L+  Y K GY D A  +F+    K +  W SL+ G +  G  EEAL  F EM   GI 
Sbjct: 380 NALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 439

Query: 317 GDEFTFGSLL-LCAETMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSV 493
            D+    ++L  CAE   L +G+Q+H+  +K G+ SS+ V ++LV MY+     E A  V
Sbjct: 440 PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKV 499

Query: 494 FNSIQEPNLVLWNAMISGFGLN 559
           F+S++  +++ W A+I G+  N
Sbjct: 500 FDSMEIQDVITWTALIVGYAQN 521


>ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522732|gb|AET03186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  151 bits (382), Expect = 2e-34
 Identities = 89/255 (34%), Positives = 132/255 (51%), Gaps = 1/255 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           +VK G    V VGS LV +Y+K G    AR V   +   +   ++ LI    + G V+ +
Sbjct: 169 VVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDS 228

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLL-CAET 361
           + LF     +    W S+I G+ + GLD +A++ F+EM+ E ++ D++TFGS+L  C   
Sbjct: 229 KRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGV 288

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
           M L+ G+Q+H+  I+     ++FV SALVDMY    + +SA +VF  +   N+V W AM+
Sbjct: 289 MALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAML 348

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFE 721
            G+G N    +AV  F  M    I PD  T   VI           G Q HA A      
Sbjct: 349 VGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLI 408

Query: 722 SNIVVGSALIDMYAK 766
           S I V +AL+ +Y K
Sbjct: 409 SFITVSNALVTLYGK 423



 Score =  138 bits (347), Expect = 2e-30
 Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 34/288 (11%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           I+K+  +    + + L+S YAK G    A  V  +M   + +SW+ +++ Y+K G V   
Sbjct: 35  IIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEM 94

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEM-ESEG-IKGDEFTFGSLLLCAE 358
             LFD+   +    WNSLI GY   GL  ++++ +  M +++G    +  TF +LL+ A 
Sbjct: 95  EYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILAS 154

Query: 359 TMG-LRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVL--- 526
             G ++ G Q+H   +K G  S VFVGS LVDMYS       A  VF+ + E N+V+   
Sbjct: 155 KRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNT 214

Query: 527 ----------------------------WNAMISGFGLNNLDYKAVNAFRLMMVQRIRPD 622
                                       W +MI+GF  N LD  A++ FR M ++ ++ D
Sbjct: 215 LIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMD 274

Query: 623 IVTFSRVIDXXXXXXXXXGGRQVHALACKLSFESNIVVGSALIDMYAK 766
             TF  V+           G+QVHA   +  ++ NI V SAL+DMY K
Sbjct: 275 QYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCK 322



 Score =  105 bits (261), Expect = 2e-20
 Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 2/199 (1%)
 Frame = +2

Query: 101 VSRMDSVDD-FSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEA 277
           + R D  D+ F  S L+  Y K   +  A A+F     K++  W +++ GY + G  EEA
Sbjct: 301 IIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEA 360

Query: 278 LETFKEMESEGIKGDEFTFGSLLL-CAETMGLRYGEQLHSQTIKLGIHSSVFVGSALVDM 454
           ++TF +M+  GI+ D+FT GS++  CA    L  G Q H++ +  G+ S + V +ALV +
Sbjct: 361 VKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTL 420

Query: 455 YSSNLDCESAMSVFNSIQEPNLVLWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTF 634
           Y      E +  +FN I   + V W A++SG+       + +  F  M+   ++PD VTF
Sbjct: 421 YGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTF 480

Query: 635 SRVIDXXXXXXXXXGGRQV 691
             V+           G Q+
Sbjct: 481 IGVLSACSRAGLVEKGNQI 499


>emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  151 bits (382), Expect = 2e-34
 Identities = 89/241 (36%), Positives = 133/241 (55%), Gaps = 2/241 (0%)
 Frame = +2

Query: 50  LVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLW 229
           ++S  +KCG  D AR +   M   D+ SW+ +I  Y   G ++ AR LF    ++S   W
Sbjct: 47  VLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITW 106

Query: 230 NSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAETMGLRYGEQLHSQTIK 406
           +SLI GY   G D EALE F EM+ EG + ++FT+GS+L +C+  + L  G+Q+H+  IK
Sbjct: 107 SSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIK 166

Query: 407 LGIHSSVFVGSALVDMYSSNLDCESAMSVFN-SIQEPNLVLWNAMISGFGLNNLDYKAVN 583
               S+ FV + LVDMY+       A  +F  +  + N VLW AM++G+  N   +KA+ 
Sbjct: 167 TQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIE 226

Query: 584 AFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFESNIVVGSALIDMYA 763
            FR M  + I  +  TF  ++           G QVH    +  F +N+ VGSAL+DMY+
Sbjct: 227 CFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYS 286

Query: 764 K 766
           K
Sbjct: 287 K 287



 Score =  101 bits (252), Expect = 2e-19
 Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 2/216 (0%)
 Frame = +2

Query: 8   VKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCAR 187
           +K+    N  V + LV +YAKC C                    +L AEY          
Sbjct: 165 IKTQFDSNAFVVTGLVDMYAKCKC--------------------ILEAEY---------- 194

Query: 188 ALFD-SFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLL-CAET 361
            LF+ + + ++  LW +++ GY + G   +A+E F++M  EGI+ ++FTF S+L  C   
Sbjct: 195 -LFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSI 253

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
               +G Q+H   ++ G  ++VFVGSALVDMYS   D  +A  +  +++  + V WN+MI
Sbjct: 254 SACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMI 313

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVID 649
            G     L  +A++ FR+M ++ ++ D  T+  +++
Sbjct: 314 VGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVN 349



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 60/214 (28%), Positives = 90/214 (42%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           IV+SG   NV VGS LV +Y+KCG   +AR ++  M+  D  SW                
Sbjct: 266 IVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSW---------------- 309

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLLCAETM 364
                          NS+I G +  GL EEAL  F+ M    +K DEFT+ SL       
Sbjct: 310 ---------------NSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSL------- 347

Query: 365 GLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMIS 544
                                 V +ALVDMY+     + A  VF  + + +++ W ++++
Sbjct: 348 ----------------------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVT 385

Query: 545 GFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVI 646
           G   N    +A+  F  M +  I PD +  + V+
Sbjct: 386 GCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVL 419


>ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
            gi|241933187|gb|EES06332.1| hypothetical protein
            SORBIDRAFT_04g004500 [Sorghum bicolor]
          Length = 807

 Score =  151 bits (382), Expect = 2e-34
 Identities = 89/290 (30%), Positives = 145/290 (50%), Gaps = 36/290 (12%)
 Frame = +2

Query: 5    IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGY---- 172
            +V+ G   +  VG+ L+ +YAK    D A  V   M SV   SW++L+  Y + G     
Sbjct: 277  VVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERA 336

Query: 173  -------------------------------VDCARALFDSFEVKSIPLWNSLIGGYLEL 259
                                           V  ARA+FD     S+  WN+L+ GY + 
Sbjct: 337  LEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQE 396

Query: 260  GLDEEALETFKEMESEGIKGDEFTFGSLLLCAETMG-LRYGEQLHSQTIKLGIHSSVFVG 436
             L ++ +E F+ M+ + ++ D  T   +L     +G L  G+Q+HS ++KL +H+ +FV 
Sbjct: 397  ELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVA 456

Query: 437  SALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMISGFGLNNLDYKAVNAFRLMMVQRIR 616
            S L+DMYS       A  +FN + E ++V WN+MISG  +++L+ +A + F+ M    + 
Sbjct: 457  SGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMF 516

Query: 617  PDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFESNIVVGSALIDMYAK 766
            P   +++ +I+          GRQ+HA   K  ++ N+ VGS+LIDMYAK
Sbjct: 517  PTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAK 566



 Score =  119 bits (297), Expect = 1e-24
 Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 5/206 (2%)
 Frame = +2

Query: 44   SVLVSLYAKCGCFDSARSVVSRMDSV----DDFSWSVLIAEYTKHGYVDCARALFDSFEV 211
            +V++S  ++ G  +  + V S    +    D F  S LI  Y+K G V  A+ +F+    
Sbjct: 422  AVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTE 481

Query: 212  KSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAETMGLRYGEQL 388
            + +  WNS+I G     L+EEA + FK+M   G+   E ++ S++  CA    +  G Q+
Sbjct: 482  RDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQI 541

Query: 389  HSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMISGFGLNNLD 568
            H+Q +K G   +V+VGS+L+DMY+   + + A   FN +   N+V WN MI G+  N   
Sbjct: 542  HAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFG 601

Query: 569  YKAVNAFRLMMVQRIRPDIVTFSRVI 646
             KAV  F  M+  + +PD VTF  V+
Sbjct: 602  EKAVELFEYMLTTKQKPDSVTFIAVL 627



 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 9/264 (3%)
 Frame = +2

Query: 2   QIVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDC 181
           +++ +GL  +  + + LV LY+  G    A      +   + +S++  I+   + G +  
Sbjct: 35  RVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAA 94

Query: 182 ARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAE 358
           AR L      ++   WN++I          EALE ++ M  EG+    FT  S+L  C  
Sbjct: 95  ARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGA 154

Query: 359 TMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAM 538
              L  G + H   +K+G+  + FV + L+ MY+       A+ +F+ +  PN V + AM
Sbjct: 155 VAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAM 214

Query: 539 ISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXG--------GRQVH 694
           + G   +     A+  F  M    IR D V  S V+                    + +H
Sbjct: 215 MGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIH 274

Query: 695 ALACKLSFESNIVVGSALIDMYAK 766
           AL  +  F+S+  VG++LIDMYAK
Sbjct: 275 ALVVRKGFDSDQHVGNSLIDMYAK 298



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 9/177 (5%)
 Frame = +2

Query: 143 LIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGD 322
           L+  YTK G V  A  LFD     +   + +++GG  + G  ++AL  F  M    I+ D
Sbjct: 183 LLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVD 242

Query: 323 EFTFGSLL-LCAETMG--------LRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDC 475
                S+L  CA+           +R  + +H+  ++ G  S   VG++L+DMY+  +  
Sbjct: 243 PVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKM 302

Query: 476 ESAMSVFNSIQEPNLVLWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVI 646
           + AM VF S+   ++V WN +++G+G      +A+    LM      P+ VT+S ++
Sbjct: 303 DEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNML 359



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
 Frame = +2

Query: 2   QIVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDC 181
           Q++K G  +NV VGS L+ +YAKCG  D AR   + M   +  +W+ +I  Y ++G+ + 
Sbjct: 544 QVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEK 603

Query: 182 ARALFD-SFEVKSIP---LWNSLIGGYLELGLDEEALETFKEMES 304
           A  LF+     K  P    + +++ G    GL +EA+  F  MES
Sbjct: 604 AVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMES 648


>ref|XP_006853457.1| hypothetical protein AMTR_s00032p00190360 [Amborella trichopoda]
           gi|548857110|gb|ERN14924.1| hypothetical protein
           AMTR_s00032p00190360 [Amborella trichopoda]
          Length = 677

 Score =  150 bits (380), Expect = 3e-34
 Identities = 82/262 (31%), Positives = 141/262 (53%), Gaps = 7/262 (2%)
 Frame = +2

Query: 2   QIVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDC 181
           +I+K G   +  + + L+S+Y  C   DSAR V   +      SW+ +I+ Y   G+ + 
Sbjct: 62  EILKLGFDHDAFLTNALISMYGNCRDLDSARKVFDEIPEPGVVSWNSMISSYFHSGHCNT 121

Query: 182 ARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEF-----TFGSLL 346
           A  LF   +  ++  W+ +I GY + G   EA++ FK++  E  + DEF       G+LL
Sbjct: 122 ANELFKLMKHPNLITWSVMIVGYSQNGHAHEAMQLFKQIRREAAQEDEFFPDSTIVGALL 181

Query: 347 LCAETMGLRYGEQLHSQTIKLG--IHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNL 520
            CA+   L +GEQ+H+ T+K+   IHS    G  L+DMYS     E A  VF+S+ E ++
Sbjct: 182 ACAQAKALSFGEQIHAYTVKVSDYIHSDPIFGGVLLDMYSKCNSMEPAQKVFDSMIEKSV 241

Query: 521 VLWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHAL 700
           V W+ +++G+  N+   + +  FR M+    +P+ VT + +I           G+++H+ 
Sbjct: 242 VAWSIIVAGYVNNSCHIQGLELFRKMVKSSAQPNPVTLANLIPACGHIKAILHGKEMHSF 301

Query: 701 ACKLSFESNIVVGSALIDMYAK 766
           A + S   ++ V ++LIDMY+K
Sbjct: 302 AIRTSMVLDMFVSTSLIDMYSK 323



 Score =  107 bits (268), Expect = 3e-21
 Identities = 73/254 (28%), Positives = 129/254 (50%), Gaps = 8/254 (3%)
 Frame = +2

Query: 29  NVLVGSVLVSLYAKCGCFDS---ARSV-VSRMDSVDDFSWSVLIAEYTKHGYVDCARALF 196
           + +VG++L    AK   F     A +V VS     D     VL+  Y+K   ++ A+ +F
Sbjct: 174 STIVGALLACAQAKALSFGEQIHAYTVKVSDYIHSDPIFGGVLLDMYSKCNSMEPAQKVF 233

Query: 197 DSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLL-LCAETMGLR 373
           DS   KS+  W+ ++ GY+      + LE F++M     + +  T  +L+  C     + 
Sbjct: 234 DSMIEKSVVAWSIIVAGYVNNSCHIQGLELFRKMVKSSAQPNPVTLANLIPACGHIKAIL 293

Query: 374 YGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSI-QEPNLVLWNAMISGF 550
           +G+++HS  I+  +   +FV ++L+DMYS   +   A+ +F+++  E    +WNA+I G+
Sbjct: 294 HGKEMHSFAIRTSMVLDMFVSTSLIDMYSKFNNMTYAIRLFDNVGPEKTTAIWNALIGGW 353

Query: 551 GLNNLDYKAV-NAFRLMMVQR-IRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFES 724
            +N      +   FR M+      P+ VT + ++           GR++H  A KL  +S
Sbjct: 354 SINGQSLDDIWCVFRSMIGSGGACPNSVTIATLLPVCAKGAFLLFGRELHCYALKLGLDS 413

Query: 725 NIVVGSALIDMYAK 766
             +VG+AL+DMYAK
Sbjct: 414 ETIVGNALVDMYAK 427



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
 Frame = +2

Query: 119 VDDFSWSVLIAEYTKHGYVDCARALFDSF-EVKSIPLWNSLIGGYLELGLD-EEALETFK 292
           +D F  + LI  Y+K   +  A  LFD+    K+  +WN+LIGG+   G   ++    F+
Sbjct: 309 LDMFVSTSLIDMYSKFNNMTYAIRLFDNVGPEKTTAIWNALIGGWSINGQSLDDIWCVFR 368

Query: 293 EM-ESEGIKGDEFTFGSLL-LCAETMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSN 466
            M  S G   +  T  +LL +CA+   L +G +LH   +KLG+ S   VG+ALVDMY+  
Sbjct: 369 SMIGSGGACPNSVTIATLLPVCAKGAFLLFGRELHCYALKLGLDSETIVGNALVDMYAKC 428

Query: 467 LDCESAMSVFNSIQEPNLVLWNAMISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTF 634
                A   F  ++  + V W AMIS +G++    +A+  F  M  ++ RPD +TF
Sbjct: 429 GTVGPAERQFEWMESRSKVSWTAMISCYGMHGDGERAIRTFERMTREKQRPDHITF 484



 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
 Frame = +2

Query: 248 YLELGLDEEALETFKEMES-EGIKGDEFTFGSLLLCAETMGLR-YGEQLHSQTIKLGIHS 421
           + + G  +E L  ++  ++   +K +   F  L+     + LR  G+ +H + +KLG   
Sbjct: 11  FFQHGRWQEVLIVYRHYQNITNLKPNNSIFSLLIKSCSKLSLRAQGQAIHGEILKLGFDH 70

Query: 422 SVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMISGFGLNNLDYKAVNAFRLMM 601
             F+ +AL+ MY +  D +SA  VF+ I EP +V WN+MIS +  +     A   F+LM 
Sbjct: 71  DAFLTNALISMYGNCRDLDSARKVFDEIPEPGVVSWNSMISSYFHSGHCNTANELFKLMK 130

Query: 602 VQRIRPDIVTFSRVI--------------------------DXXXXXXXXXG-------- 679
                P+++T+S +I                          D         G        
Sbjct: 131 ----HPNLITWSVMIVGYSQNGHAHEAMQLFKQIRREAAQEDEFFPDSTIVGALLACAQA 186

Query: 680 -----GRQVHALACKLS--FESNIVVGSALIDMYAK 766
                G Q+HA   K+S    S+ + G  L+DMY+K
Sbjct: 187 KALSFGEQIHAYTVKVSDYIHSDPIFGGVLLDMYSK 222


>ref|XP_006646769.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Oryza brachyantha]
          Length = 678

 Score =  150 bits (378), Expect = 6e-34
 Identities = 89/256 (34%), Positives = 128/256 (50%), Gaps = 1/256 (0%)
 Frame = +2

Query: 2   QIVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDC 181
           Q+++ G      VGS LV +YAK G    AR V   M+S      + LI    +   +D 
Sbjct: 98  QVLRLGFGAYAFVGSPLVDMYAKMGLIRDARQVFEEMESKTVVMCNTLITGLLRCKMIDD 157

Query: 182 ARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLL-CAE 358
           A++LF+  E +    W +++ G  + GL  EAL+ F+ M +EG+  D++TFGS+L  C  
Sbjct: 158 AKSLFELMEERDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGA 217

Query: 359 TMGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAM 538
              L  G+Q+H+   +     +VFVGSALVDMYS      SA +VF  +   N++ W AM
Sbjct: 218 LAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRCIRSAEAVFRRMTCRNIISWTAM 277

Query: 539 ISGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSF 718
           I G+G N+   +AV  F  M    I PD  T   VI           G Q H LA     
Sbjct: 278 IVGYGQNSCSEEAVRVFSEMQRYGIEPDDFTLGSVISSCANLASLEEGAQFHCLALVSGL 337

Query: 719 ESNIVVGSALIDMYAK 766
              + V +AL+ +Y K
Sbjct: 338 MRYVTVSNALVTLYGK 353



 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 33/246 (13%)
 Frame = +2

Query: 128 FSWSVLIAEYTKHGYVDCARALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEM-ES 304
           F+ + L++   +   V     LF S   +    +N++I G+   G    + E ++ +   
Sbjct: 7   FTRNALLSALARARLVPDMERLFASMPERDAVSYNAIITGFSGSGSPARSAEAYRALLRE 66

Query: 305 EGIKGDEFTFGSLLLCAETMGLR-YGEQLHSQTIKLGIHSSVFVGSALVDMYSSN----- 466
           E ++    T  S+++ A  +  R  G Q+H Q ++LG  +  FVGS LVDMY+       
Sbjct: 67  ENVRPTRITLSSMVMIASALADRSLGRQVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRD 126

Query: 467 -----------------------LDC---ESAMSVFNSIQEPNLVLWNAMISGFGLNNLD 568
                                  L C   + A S+F  ++E + + W  M++G   N L 
Sbjct: 127 ARQVFEEMESKTVVMCNTLITGLLRCKMIDDAKSLFELMEERDSITWTTMVTGLTQNGLQ 186

Query: 569 YKAVNAFRLMMVQRIRPDIVTFSRVIDXXXXXXXXXGGRQVHALACKLSFESNIVVGSAL 748
            +A++ FR M  + +  D  TF  ++           G+Q+HA   +  +E N+ VGSAL
Sbjct: 187 LEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSAL 246

Query: 749 IDMYAK 766
           +DMY+K
Sbjct: 247 VDMYSK 252



 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
 Frame = +2

Query: 5   IVKSGLHRNVLVGSVLVSLYAKCGCFDSARSVVSRMDSVDDFSWSVLIAEYTKHGYVDCA 184
           I ++    NV VGS LV +Y+KC C  SA                               
Sbjct: 231 ITRTWYEDNVFVGSALVDMYSKCRCIRSAE------------------------------ 260

Query: 185 RALFDSFEVKSIPLWNSLIGGYLELGLDEEALETFKEMESEGIKGDEFTFGSLLL-CAET 361
            A+F     ++I  W ++I GY +    EEA+  F EM+  GI+ D+FT GS++  CA  
Sbjct: 261 -AVFRRMTCRNIISWTAMIVGYGQNSCSEEAVRVFSEMQRYGIEPDDFTLGSVISSCANL 319

Query: 362 MGLRYGEQLHSQTIKLGIHSSVFVGSALVDMYSSNLDCESAMSVFNSIQEPNLVLWNAMI 541
             L  G Q H   +  G+   V V +ALV +Y      E A  +F+ +   + V W A++
Sbjct: 320 ASLEEGAQFHCLALVSGLMRYVTVSNALVTLYGKCGSIEDAHRLFDEMVFHDQVSWTALV 379

Query: 542 SGFGLNNLDYKAVNAFRLMMVQRIRPDIVTFSRVI 646
           SG+       + ++ F  M+   ++PD VTF  V+
Sbjct: 380 SGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVL 414


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