BLASTX nr result
ID: Stemona21_contig00030067
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00030067
(313 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB18341.1| RNA polymerase beta subunit, partial [Kingia aust... 196 3e-48
gb|AFB18345.1| RNA polymerase beta subunit, partial [Neoastelia ... 195 5e-48
gb|AEX94368.1| RNA polymerase beta subunit (chloroplast) [Dichel... 195 6e-48
gb|AEX94367.1| RNA polymerase beta subunit (chloroplast) [Dichel... 195 6e-48
gb|AEX94366.1| RNA polymerase beta subunit (chloroplast) [Dichel... 195 6e-48
ref|YP_008854503.1| RNA polymerase beta subunit [Ravenala madaga... 194 1e-47
gb|AFB18329.1| RNA polymerase beta subunit [Molineria capitulata] 194 1e-47
ref|YP_008854417.1| RNA polymerase beta subunit [Musa textilis] ... 194 1e-47
emb|CCW72367.1| rpoB (chloroplast) [Musa acuminata subsp. malacc... 194 1e-47
gb|ABU85436.1| RNA polymerase beta subunit [Musa acuminata] 194 1e-47
gb|AHA12916.1| RNA polymerase beta subunit [Monocostus uniflorus] 193 2e-47
gb|AEX94369.1| RNA polymerase beta subunit (chloroplast) [Tritel... 193 2e-47
gb|AEX94365.1| RNA polymerase beta subunit (chloroplast) [Brodia... 193 2e-47
ref|YP_003587460.1| RNA polymerase beta subunit [Oncidium hybrid... 193 2e-47
ref|YP_007475867.1| RNA polymerase beta subunit [Calamus caryoto... 192 3e-47
gb|AFB18322.1| RNA polymerase beta subunit, partial [Apostasia w... 192 3e-47
gb|AFB18321.1| RNA polymerase beta subunit [Albuca kirkii] 192 3e-47
gb|AEX94351.1| RNA polymerase beta subunit (chloroplast) [Ornith... 192 3e-47
gb|AHA13002.1| RNA polymerase beta subunit [Costus pulverulentus] 192 4e-47
gb|AEX94349.1| RNA polymerase beta subunit (chloroplast) [Drimia... 192 4e-47
>gb|AFB18341.1| RNA polymerase beta subunit, partial [Kingia australis]
gi|392841330|gb|AFM83285.1| RNA polymerase beta subunit
(chloroplast) [Kingia australis]
Length = 1070
Score = 196 bits (497), Expect = 3e-48
Identities = 96/104 (92%), Positives = 99/104 (95%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSKEAQMVYLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 453 PFYEISERSKEAQMVYLSPNRDEYYMVAAGNSLALNQGIQEEQVVPARYRQEFLTIAWEQ 512
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 513 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 556
>gb|AFB18345.1| RNA polymerase beta subunit, partial [Neoastelia spectabilis]
Length = 1075
Score = 195 bits (496), Expect = 5e-48
Identities = 96/104 (92%), Positives = 99/104 (95%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSKEAQMVYLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 458 PFYEISERSKEAQMVYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQ 517
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 518 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 561
>gb|AEX94368.1| RNA polymerase beta subunit (chloroplast) [Dichelostemma ida-maia]
Length = 1070
Score = 195 bits (495), Expect = 6e-48
Identities = 95/104 (91%), Positives = 100/104 (96%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSK+AQM+YLSPNRDEYYMVA+GNSLA+N SIQEEQVVP RY QEFLTIAWEQ
Sbjct: 453 PFYEISERSKKAQMIYLSPNRDEYYMVAAGNSLALNRSIQEEQVVPARYRQEFLTIAWEQ 512
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 513 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 556
>gb|AEX94367.1| RNA polymerase beta subunit (chloroplast) [Dichelostemma congestum]
Length = 1070
Score = 195 bits (495), Expect = 6e-48
Identities = 95/104 (91%), Positives = 100/104 (96%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSK+AQM+YLSPNRDEYYMVA+GNSLA+N SIQEEQVVP RY QEFLTIAWEQ
Sbjct: 453 PFYEISERSKKAQMIYLSPNRDEYYMVAAGNSLALNRSIQEEQVVPARYRQEFLTIAWEQ 512
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 513 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 556
>gb|AEX94366.1| RNA polymerase beta subunit (chloroplast) [Dichelostemma capitatum]
Length = 1070
Score = 195 bits (495), Expect = 6e-48
Identities = 95/104 (91%), Positives = 100/104 (96%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSK+AQM+YLSPNRDEYYMVA+GNSLA+N SIQEEQVVP RY QEFLTIAWEQ
Sbjct: 453 PFYEISERSKKAQMIYLSPNRDEYYMVAAGNSLALNRSIQEEQVVPARYRQEFLTIAWEQ 512
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 513 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 556
>ref|YP_008854503.1| RNA polymerase beta subunit [Ravenala madagascariensis]
gi|557636991|gb|AHA12592.1| RNA polymerase beta subunit
[Ravenala madagascariensis]
Length = 1074
Score = 194 bits (493), Expect = 1e-47
Identities = 95/104 (91%), Positives = 99/104 (95%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSKEAQ+VYLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 454 PFYEISERSKEAQIVYLSPNRDEYYMVAAGNSLALNQGIQEEQVVPARYRQEFLTIAWEQ 513
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 514 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 557
>gb|AFB18329.1| RNA polymerase beta subunit [Molineria capitulata]
Length = 1070
Score = 194 bits (493), Expect = 1e-47
Identities = 95/104 (91%), Positives = 99/104 (95%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSKE+QMVYLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 453 PFYEISERSKESQMVYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQ 512
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 513 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 556
>ref|YP_008854417.1| RNA polymerase beta subunit [Musa textilis]
gi|557636904|gb|AHA12506.1| RNA polymerase beta subunit
[Musa textilis]
Length = 1074
Score = 194 bits (492), Expect = 1e-47
Identities = 95/104 (91%), Positives = 99/104 (95%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSKEAQ+VYLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 454 PFYEISERSKEAQIVYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQ 513
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 514 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 557
>emb|CCW72367.1| rpoB (chloroplast) [Musa acuminata subsp. malaccensis]
Length = 1074
Score = 194 bits (492), Expect = 1e-47
Identities = 95/104 (91%), Positives = 99/104 (95%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSKEAQ+VYLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 454 PFYEISERSKEAQIVYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQ 513
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 514 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 557
>gb|ABU85436.1| RNA polymerase beta subunit [Musa acuminata]
Length = 1070
Score = 194 bits (492), Expect = 1e-47
Identities = 95/104 (91%), Positives = 99/104 (95%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSKEAQ+VYLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 450 PFYEISERSKEAQIVYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQ 509
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 510 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 553
>gb|AHA12916.1| RNA polymerase beta subunit [Monocostus uniflorus]
Length = 1074
Score = 193 bits (491), Expect = 2e-47
Identities = 95/104 (91%), Positives = 99/104 (95%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSKEAQ+VYLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 454 PFYEISERSKEAQIVYLSPNRDEYYMVAAGNSLALNRCIQEEQVVPARYRQEFLTIAWEQ 513
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 514 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 557
>gb|AEX94369.1| RNA polymerase beta subunit (chloroplast) [Triteleia hyacinthina]
Length = 1070
Score = 193 bits (491), Expect = 2e-47
Identities = 94/104 (90%), Positives = 99/104 (95%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSK+AQM+YLSPNRDEYYMVA+GNSLA+N SIQEEQVVP RY QEFLTIAWEQ
Sbjct: 453 PFYEISERSKKAQMIYLSPNRDEYYMVAAGNSLALNRSIQEEQVVPARYRQEFLTIAWEQ 512
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ RSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 513 IHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 556
>gb|AEX94365.1| RNA polymerase beta subunit (chloroplast) [Brodiaea californica]
Length = 1070
Score = 193 bits (491), Expect = 2e-47
Identities = 94/104 (90%), Positives = 100/104 (96%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSK+A+M+YLSPNRDEYYMVA+GNSLA+N SIQEEQVVP RY QEFLTIAWEQ
Sbjct: 453 PFYEISERSKKARMIYLSPNRDEYYMVAAGNSLALNRSIQEEQVVPARYRQEFLTIAWEQ 512
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 513 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 556
>ref|YP_003587460.1| RNA polymerase beta subunit [Oncidium hybrid cultivar]
gi|254833101|gb|ACT83104.1| RNA polymerase beta subunit
[Oncidium hybrid cultivar]
Length = 1070
Score = 193 bits (490), Expect = 2e-47
Identities = 93/104 (89%), Positives = 100/104 (96%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYE+S+RSKEAQMVYLSPNRDEYYMVA+GNSLA+N IQE+QVVP RY QEFLTIAWE+
Sbjct: 453 PFYELSDRSKEAQMVYLSPNRDEYYMVAAGNSLALNRGIQEQQVVPARYRQEFLTIAWEE 512
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+RLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 513 IRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 556
>ref|YP_007475867.1| RNA polymerase beta subunit [Calamus caryotoides]
gi|449326349|gb|AGE92932.1| RNA polymerase beta subunit
[Calamus caryotoides]
Length = 1072
Score = 192 bits (489), Expect = 3e-47
Identities = 94/104 (90%), Positives = 99/104 (95%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEIS+RSKEAQ+VYLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 453 PFYEISQRSKEAQVVYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQ 512
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 513 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 556
>gb|AFB18322.1| RNA polymerase beta subunit, partial [Apostasia wallichii]
Length = 1081
Score = 192 bits (489), Expect = 3e-47
Identities = 93/104 (89%), Positives = 100/104 (96%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYE+S+RSKEAQMVYLSPN+DEYYMVA+GNSLA+N SIQEEQVVP RY QEFLTIAWE+
Sbjct: 464 PFYELSDRSKEAQMVYLSPNKDEYYMVAAGNSLALNRSIQEEQVVPARYRQEFLTIAWEE 523
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 524 IHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 567
>gb|AFB18321.1| RNA polymerase beta subunit [Albuca kirkii]
Length = 1070
Score = 192 bits (489), Expect = 3e-47
Identities = 95/104 (91%), Positives = 98/104 (94%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSK+AQMVYLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 453 PFYEISERSKKAQMVYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQ 512
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
V RSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 513 VHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 556
>gb|AEX94351.1| RNA polymerase beta subunit (chloroplast) [Ornithogalum
tenuifolium]
Length = 1070
Score = 192 bits (489), Expect = 3e-47
Identities = 95/104 (91%), Positives = 98/104 (94%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSK+AQMVYLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 453 PFYEISERSKKAQMVYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQ 512
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
V RSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 513 VHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 556
>gb|AHA13002.1| RNA polymerase beta subunit [Costus pulverulentus]
Length = 1074
Score = 192 bits (488), Expect = 4e-47
Identities = 94/104 (90%), Positives = 99/104 (95%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSKEAQ+VYLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 454 PFYEISERSKEAQIVYLSPNRDEYYMVAAGNSLALNRCIQEEQVVPARYRQEFLTIAWEQ 513
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
+ LR+IFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 514 IHLRNIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 557
>gb|AEX94349.1| RNA polymerase beta subunit (chloroplast) [Drimia altissima]
Length = 1070
Score = 192 bits (488), Expect = 4e-47
Identities = 94/104 (90%), Positives = 98/104 (94%)
Frame = -2
Query: 312 PFYEISERSKEAQMVYLSPNRDEYYMVASGNSLAMNPSIQEEQVVPVRYHQEFLTIAWEQ 133
PFYEISERSK+AQM+YLSPNRDEYYMVA+GNSLA+N IQEEQVVP RY QEFLTIAWEQ
Sbjct: 453 PFYEISERSKKAQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQ 512
Query: 132 VRLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 1
V RSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS
Sbjct: 513 VHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS 556