BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00029453
         (354 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004298151.1| PREDICTED: uncharacterized protein LOC101300...    57   2e-08
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]              52   9e-08
gb|AAF03460.1|AC009992_2 putative reverse transcriptase, 5' part...    53   3e-07
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...    49   4e-07
ref|XP_004308743.1| PREDICTED: uncharacterized protein LOC101305...    60   4e-07
emb|CAN80312.1| hypothetical protein VITISV_040995 [Vitis vinifera]    49   4e-07
ref|XP_004295649.1| PREDICTED: uncharacterized protein LOC101312...    57   4e-07
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      58   1e-06
ref|XP_004292299.1| PREDICTED: gypsy retrotransposon integrase-l...    56   1e-06
ref|XP_004301611.1| PREDICTED: uncharacterized protein LOC101300...    57   2e-06
ref|XP_004308568.1| PREDICTED: uncharacterized protein LOC101290...    52   2e-06
emb|CAN64323.1| hypothetical protein VITISV_022768 [Vitis vinifera]    48   2e-06
emb|CAN82734.1| hypothetical protein VITISV_028708 [Vitis vinifera]    49   4e-06
emb|CAN81948.1| hypothetical protein VITISV_024472 [Vitis vinifera]    49   5e-06
emb|CAN60222.1| hypothetical protein VITISV_027939 [Vitis vinifera]    48   5e-06
ref|XP_004306172.1| PREDICTED: uncharacterized protein LOC101308...    54   6e-06
emb|CAN82830.1| hypothetical protein VITISV_005334 [Vitis vinifera]    47   1e-05

>ref|XP_004298151.1| PREDICTED: uncharacterized protein LOC101300244 [Fragaria vesca
           subsp. vesca]
          Length = 629

 Score = 57.0 bits (136), Expect(3) = 2e-08
 Identities = 28/73 (38%), Positives = 44/73 (60%)
 Frame = -2

Query: 302 PFALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELV 123
           PF++AFG++ V P+E  +PS R   ++   N   L  ++DLIEE+  +AD    +Y++ V
Sbjct: 497 PFSMAFGTEVVLPIETSIPSGRVKNFNATTNEEGLHLNIDLIEEKRKRADLHNQVYKQRV 556

Query: 122 ASSNNSKVGKRVL 84
           A   N+KV  R L
Sbjct: 557 ARHYNNKVRTRTL 569



 Score = 23.5 bits (49), Expect(3) = 2e-08
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 352 QILWAYCTTPCWRTGDTP 299
           ++LWA  TT    TG+TP
Sbjct: 480 EVLWAIKTTTTEATGETP 497



 Score = 22.7 bits (47), Expect(3) = 2e-08
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 24  LNPNWEGP 1
           L+PNWEGP
Sbjct: 586 LDPNWEGP 593


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 51.6 bits (122), Expect(3) = 9e-08
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = -2

Query: 302  PFALAFGSDAVAPVENHLPSYRRLF--YDEDDNRALLEASLDLIEERCNKADAKRAIYQE 129
            PF+L +G +AV P E ++P  RR     +E++N A+L  SLD I ER ++A  +   YQ+
Sbjct: 964  PFSLVYGMEAVVPAELNVPGLRRTEAPLNEEENSAMLNDSLDTINERRDQALIRIQNYQQ 1023

Query: 128  LVASSNNSKVGKR 90
              A   NSKV  R
Sbjct: 1024 AAARYYNSKVKSR 1036



 Score = 27.7 bits (60), Expect(3) = 9e-08
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 349 ILWAYCTTPCWRTGDTP 299
           +LWAY TTP   TG+TP
Sbjct: 948 VLWAYRTTPRRPTGETP 964



 Score = 21.6 bits (44), Expect(3) = 9e-08
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -1

Query: 63   RRFSALTSRGTDNLNPNWEGP 1
            R F      G   L  NWEGP
Sbjct: 1047 RVFDNKKEEGAGKLGINWEGP 1067


>gb|AAF03460.1|AC009992_2 putative reverse transcriptase, 5' partial [Arabidopsis thaliana]
          Length = 177

 Score = 52.8 bits (125), Expect(3) = 3e-07
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = -2

Query: 302 PFALAFGSDAVAPVENHLPSYRRLF--YDEDDNRALLEASLDLIEERCNKADAKRAIYQE 129
           PF+L +G +AV P + ++P  RR     +ED+N A+L+ SLD I ER ++A  +   YQ+
Sbjct: 38  PFSLVYGMEAVVPAKLNVPGLRRTEAPLNEDENSAMLDDSLDTINERRDQALIRIQNYQQ 97

Query: 128 LVASSNNSKVGKR 90
             A   NSK+  R
Sbjct: 98  AAARYYNSKINSR 110



 Score = 25.0 bits (53), Expect(3) = 3e-07
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 349 ILWAYCTTPCWRTGDTP 299
           +LWAY TT    TG+TP
Sbjct: 22  VLWAYRTTSRRSTGETP 38



 Score = 21.6 bits (44), Expect(3) = 3e-07
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -1

Query: 63  RRFSALTSRGTDNLNPNWEGP 1
           R F      G   L  NWEGP
Sbjct: 121 RVFDNKKEEGAGKLGINWEGP 141


>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 48.9 bits (115), Expect(3) = 4e-07
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = -2

Query: 302  PFALAFGSDAVAPVENHLPSYRRLF--YDEDDNRALLEASLDLIEERCNKADAKRAIYQE 129
            PF+L +G  AV P E ++P  RR     +E +N A+L+ SLD I ER ++A  +   YQ 
Sbjct: 1147 PFSLVYGMKAVVPAELNVPGLRRTEAPLNEKENSAMLDDSLDTINERRDQALIQIQNYQH 1206

Query: 128  LVASSNNSKVGKR 90
              A   NSKV  R
Sbjct: 1207 AAARYYNSKVKSR 1219



 Score = 28.1 bits (61), Expect(3) = 4e-07
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 349  ILWAYCTTPCWRTGDTP 299
            +LWAY TTP   TG+TP
Sbjct: 1131 VLWAYRTTPRRSTGETP 1147



 Score = 21.6 bits (44), Expect(3) = 4e-07
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -1

Query: 63   RRFSALTSRGTDNLNPNWEGP 1
            R F      G   L  NWEGP
Sbjct: 1230 RVFDNKKEEGAGKLGINWEGP 1250


>ref|XP_004308743.1| PREDICTED: uncharacterized protein LOC101305805 [Fragaria vesca
           subsp. vesca]
          Length = 196

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/72 (43%), Positives = 45/72 (62%)
 Frame = -2

Query: 299 FALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELVA 120
           F+LAFG++AV P+E  +PS R   +D   N   L+ +++LIEER  +AD    +Y++ VA
Sbjct: 65  FSLAFGTEAVLPIETSIPSRRVENFDATTNEEGLQLNINLIEERRERADLHNQVYKQRVA 124

Query: 119 SSNNSKVGKRVL 84
              NSKV  R L
Sbjct: 125 RHYNSKVRTRTL 136


>emb|CAN80312.1| hypothetical protein VITISV_040995 [Vitis vinifera]
          Length = 944

 Score = 48.9 bits (115), Expect(3) = 4e-07
 Identities = 28/71 (39%), Positives = 37/71 (52%)
 Frame = -2

Query: 302  PFALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELV 123
            PFALA+G DAV P E  LP+ R     +DD    L  +LD ++E    A  + A YQ+  
Sbjct: 807  PFALAYGMDAVIPTEIGLPTIRTEVGKQDDANTELGRNLDWVDETRETASIRMADYQQRA 866

Query: 122  ASSNNSKVGKR 90
            A+  N K   R
Sbjct: 867  AAHYNRKARPR 877



 Score = 27.3 bits (59), Expect(3) = 4e-07
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 349 ILWAYCTTPCWRTGDTP 299
           +LWAY TTP   TG+TP
Sbjct: 791 VLWAYRTTPGRPTGNTP 807



 Score = 22.3 bits (46), Expect(3) = 4e-07
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = -1

Query: 57  FSALTSRGTDNLNPNWEGP 1
           F   T  G      NWEGP
Sbjct: 890 FENTTKTGAGKFQANWEGP 908


>ref|XP_004295649.1| PREDICTED: uncharacterized protein LOC101312238 [Fragaria vesca
           subsp. vesca]
          Length = 591

 Score = 56.6 bits (135), Expect(2) = 4e-07
 Identities = 28/68 (41%), Positives = 45/68 (66%)
 Frame = -2

Query: 302 PFALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELV 123
           PF+LAFG++AV P+E  +PS R   Y+E+ N   L+ ++DLIEE+  + D    +Y++ V
Sbjct: 522 PFSLAFGTEAVIPIELTVPSGRVEGYNEETNAEGLQLNMDLIEEKRERVDLHNQVYKQRV 581

Query: 122 ASSNNSKV 99
           +   +SKV
Sbjct: 582 SRHYDSKV 589



 Score = 22.7 bits (47), Expect(2) = 4e-07
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 352 QILWAYCTTPCWRTGDTP 299
           + LWA  TTP   TG+ P
Sbjct: 505 EALWAIRTTPTESTGEMP 522


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
 Frame = -2

Query: 302  PFALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELV 123
            PF L +GS+AV P+E  +P++R   ++  +N   L+ASLDL+EE  + A    A+YQ  +
Sbjct: 1170 PFHLVYGSEAVLPIEAVVPTFRTATFNPVENEEGLKASLDLVEESRDTARLNLAVYQNRM 1229

Query: 122  ASSNNSKVGKR-------VLRGRSCLKEGSRHSR 42
              + N +V KR       VLR  +   +G+ H +
Sbjct: 1230 RRAYNHRVHKRDLRVGDLVLRKSTATNKGNIHGK 1263


>ref|XP_004292299.1| PREDICTED: gypsy retrotransposon integrase-like protein 1-like
           [Fragaria vesca subsp. vesca]
          Length = 282

 Score = 55.8 bits (133), Expect(2) = 1e-06
 Identities = 29/68 (42%), Positives = 44/68 (64%)
 Frame = -2

Query: 302 PFALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELV 123
           PF+LAFG++AV P+E  + S R   Y+ED N   L+  LDLIEE+ ++ D    +Y++ +
Sbjct: 150 PFSLAFGTEAVIPIELTVLSGRVEGYNEDTNAEGLQLDLDLIEEKRDRVDLHNQVYKQRI 209

Query: 122 ASSNNSKV 99
           A   +SKV
Sbjct: 210 ARHYDSKV 217



 Score = 21.9 bits (45), Expect(2) = 1e-06
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 352 QILWAYCTTPCWRTGDTP 299
           + LWA  TT    TG+TP
Sbjct: 133 ETLWAIRTTATESTGETP 150


>ref|XP_004301611.1| PREDICTED: uncharacterized protein LOC101300632 [Fragaria vesca
           subsp. vesca]
          Length = 732

 Score = 56.6 bits (135), Expect(2) = 2e-06
 Identities = 29/72 (40%), Positives = 46/72 (63%)
 Frame = -2

Query: 299 FALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELVA 120
           F++AFG++AV P+E  + S R   +D   N+  L+ ++DLIEER  +AD    +Y++ VA
Sbjct: 601 FSMAFGTEAVLPIETLISSGRVENFDATTNKEGLQLNIDLIEERRERADLHNQVYKQQVA 660

Query: 119 SSNNSKVGKRVL 84
              N+KV  R+L
Sbjct: 661 RHYNNKVRARML 672



 Score = 20.4 bits (41), Expect(2) = 2e-06
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 24  LNPNWEGP 1
           L+P WEGP
Sbjct: 689 LDPTWEGP 696


>ref|XP_004308568.1| PREDICTED: uncharacterized protein LOC101290910 [Fragaria vesca
           subsp. vesca]
          Length = 498

 Score = 52.4 bits (124), Expect(2) = 2e-06
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = -2

Query: 302 PFALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELV 123
           P+ L++G++AV PVE  +PS R   YD + N   L  ++DL++ER ++A  +    ++ +
Sbjct: 377 PYLLSYGTEAVIPVEMEVPSERITTYDPETNATGLRLNMDLLDERRDRAHQRNINNKQKI 436

Query: 122 ASSNNSKVGKRVLR-GRSCLKEGSRH 48
           A   N KV  R L+ G   +KE   H
Sbjct: 437 AKHYNKKVVPRPLKVGDWVMKEVIPH 462



 Score = 24.6 bits (52), Expect(2) = 2e-06
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 352 QILWAYCTTPCWRTGDTPLL 293
           ++LW   TTP   TG++P L
Sbjct: 360 EVLWTIRTTPIAATGESPYL 379


>emb|CAN64323.1| hypothetical protein VITISV_022768 [Vitis vinifera]
          Length = 952

 Score = 47.8 bits (112), Expect(3) = 2e-06
 Identities = 28/71 (39%), Positives = 38/71 (53%)
 Frame = -2

Query: 302  PFALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELV 123
            PFALA+G DA+ P E  LP+ R     +DD  A L  +LD  +E    A  + A YQ+  
Sbjct: 819  PFALAYGMDAIVPTEIGLPTIRIEAGKQDDANAELGRNLDWADEVRESASIRMADYQQRA 878

Query: 122  ASSNNSKVGKR 90
            ++  N KV  R
Sbjct: 879  SAHYNRKVRPR 889



 Score = 26.9 bits (58), Expect(3) = 2e-06
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 349 ILWAYCTTPCWRTGDTP 299
           +LWAY TTP   TG+TP
Sbjct: 803 VLWAYRTTPERPTGNTP 819



 Score = 21.2 bits (43), Expect(3) = 2e-06
 Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
 Frame = -1

Query: 90  SSKREILS*RR-FSALTSRGTDNLNPNWEGP 1
           S K  IL  R+ F      G      NWEGP
Sbjct: 890 SFKNGILVLRKVFENTAETGVGKFQANWEGP 920


>emb|CAN82734.1| hypothetical protein VITISV_028708 [Vitis vinifera]
          Length = 889

 Score = 48.9 bits (115), Expect(2) = 4e-06
 Identities = 31/88 (35%), Positives = 45/88 (51%)
 Frame = -2

Query: 302  PFALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELV 123
            PFALA+G DAV P+E  LP+ R     +DD  A L  +LD  +E    A  +   YQ+  
Sbjct: 777  PFALAYGMDAVIPIEIGLPTIRTEAAKQDDADAELGRNLDWADEVRESAAIRMTDYQQRA 836

Query: 122  ASSNNSKVGKRVLRGRSCLKEGSRHSRA 39
             +  N KV  + L+  + +   SR + A
Sbjct: 837  FAHYNCKVRPKSLKNGTLVLRKSRENGA 864



 Score = 27.3 bits (59), Expect(2) = 4e-06
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 349 ILWAYCTTPCWRTGDTP 299
           +LWAY TTP   TG+TP
Sbjct: 761 VLWAYRTTPGRPTGNTP 777


>emb|CAN81948.1| hypothetical protein VITISV_024472 [Vitis vinifera]
          Length = 948

 Score = 48.5 bits (114), Expect(2) = 5e-06
 Identities = 30/85 (35%), Positives = 42/85 (49%)
 Frame = -2

Query: 302  PFALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELV 123
            PFALA+G DAV P E  LP+ R     +DD    L  +LD  +E   +A  + A YQ+  
Sbjct: 840  PFALAYGMDAVIPTEIGLPTIRTEAAKQDDANTELGRNLDWADEVRERAAIRMADYQQRA 899

Query: 122  ASSNNSKVGKRVLRGRSCLKEGSRH 48
            ++  N KV  R  +  S   E   +
Sbjct: 900  SAHYNRKVRPRSFKNVSKASENGAY 924



 Score = 27.3 bits (59), Expect(2) = 5e-06
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 349 ILWAYCTTPCWRTGDTP 299
           +LWAY TTP   TG+TP
Sbjct: 824 VLWAYRTTPGRPTGNTP 840


>emb|CAN60222.1| hypothetical protein VITISV_027939 [Vitis vinifera]
          Length = 301

 Score = 48.1 bits (113), Expect(2) = 5e-06
 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
 Frame = -2

Query: 302 PFALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELV 123
           PFAL +G DAV P E  LP+ R     +DD  A L  +LD  +E    A  +   YQ+ V
Sbjct: 181 PFALTYGMDAVIPTEIGLPTIRTEAAKQDDANAKLGRNLDWADEVRESAAIRMVDYQQRV 240

Query: 122 ASSNNSKVGKRVLRGRSCL--KEG 57
           ++  N +V  R L+  + +  KEG
Sbjct: 241 SAHYNHRVRPRSLKNGTLVLRKEG 264



 Score = 27.7 bits (60), Expect(2) = 5e-06
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -3

Query: 349 ILWAYCTTPCWRTGDTP 299
           ILWAY TTP   TG+TP
Sbjct: 165 ILWAYQTTPGRPTGNTP 181


>ref|XP_004306172.1| PREDICTED: uncharacterized protein LOC101308605 [Fragaria vesca
           subsp. vesca]
          Length = 159

 Score = 54.3 bits (129), Expect(2) = 6e-06
 Identities = 29/73 (39%), Positives = 44/73 (60%)
 Frame = -2

Query: 302 PFALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELV 123
           PF++AFG++AV P+E  +P  R   +D   N  L   ++DLIEE+  +AD    +Y++ V
Sbjct: 48  PFSMAFGTEAVLPIETSIPLGRVENFDATTNEGL-RLNIDLIEEKRERADLHNQVYKQRV 106

Query: 122 ASSNNSKVGKRVL 84
           A   +SKV  R L
Sbjct: 107 ARHYDSKVRARTL 119



 Score = 21.2 bits (43), Expect(2) = 6e-06
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 352 QILWAYCTTPCWRTGDTP 299
           ++LWA  TT     G+TP
Sbjct: 31  EVLWAIRTTATEAMGETP 48


>emb|CAN82830.1| hypothetical protein VITISV_005334 [Vitis vinifera]
          Length = 873

 Score = 47.4 bits (111), Expect(2) = 1e-05
 Identities = 27/71 (38%), Positives = 39/71 (54%)
 Frame = -2

Query: 302 PFALAFGSDAVAPVENHLPSYRRLFYDEDDNRALLEASLDLIEERCNKADAKRAIYQELV 123
           PFALA+G +A+ P+E  LP+ R     +DD  A L  +LD  +E    A  + A YQ+  
Sbjct: 736 PFALAYGMNAIIPIEIGLPTIRTEAGKQDDANAELGRNLDWADEVRESASIRMADYQQRA 795

Query: 122 ASSNNSKVGKR 90
           ++  N KV  R
Sbjct: 796 SAHYNRKVRPR 806



 Score = 27.3 bits (59), Expect(2) = 1e-05
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 349 ILWAYCTTPCWRTGDTP 299
           +LWAY TTP   TG+TP
Sbjct: 720 VLWAYRTTPGRPTGNTP 736