BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00027936
         (499 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...    61   2e-07
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]    56   4e-06

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +2

Query: 11  PIAMVKFIRILVV-AYHYDHEVLQMDIKTDFHYGIGKSETLRKIPNGTT*GSHCFGFRKQ 187
           P+AM+K IRIL+  A HYD+E+ QMD+KT F  G  +       P G T        RK 
Sbjct: 528 PVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPE---AARKV 584

Query: 188 LVMTMLMYDLKQGSRSWDKIFSQAIKTGDILSSHK 292
             +   +Y LKQ SRSW+  F++AIK  D + + +
Sbjct: 585 CKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEE 619


>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
          Length = 961

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
 Frame = +2

Query: 11  PIAMVKFIRILV-VAYHYDHEVLQMDIKTDFHYGIGKSETLRKIPNGTT*GSHCFGF--- 178
           P+AM+K IRIL+ +A +YD+E+ QMD+KT F  G    ET+  + +         GF   
Sbjct: 667 PVAMLKSIRILLSIAAYYDYEIWQMDVKTTFLNG-HLEETIYMVQSE--------GFVVK 717

Query: 179 ---RKQLVMTMLMYDLKQGSRSWDKIFSQAIKTGDILSSHK 292
              +K   +   +Y LKQ SRSW+  FS+AIK+ + LS  K
Sbjct: 718 DQEQKVCKLQRSIYGLKQASRSWNIRFSEAIKSYESLSQVK 758