BLASTX nr result

ID: Stemona21_contig00027919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00027919
         (962 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ85678.1| predicted protein [Hordeum vulgare subsp. vulgare]     72   2e-10

>dbj|BAJ85678.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 834

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 75/236 (31%), Positives = 99/236 (41%), Gaps = 11/236 (4%)
 Frame = +1

Query: 286 RAPPSPMPSVGTRRSTRVFVXXXXXXXXXXXXXXXQSGRVLRSGERFAEPLDKLASSEEN 465
           R PP PMP+VG RRSTRVF+               +  RV RS +R A     ++S+  +
Sbjct: 12  RPPPPPMPAVGARRSTRVFL----PRAHKQAPRPPEPARVTRSAKRLA-----ISSNHSH 62

Query: 466 ELLRVFDGGGGATDRRGSEEQEAEAGWREAGATERPLDEEARNYPFGRKTCRMVYSRKRR 645
            L        G   R  S   + +    +      P  E + + P   ++   VY RKRR
Sbjct: 63  WL--------GWEQRAASTSDDDDDD--DGPKPRTPQRELSPDRPMSPRSFGAVYRRKRR 112

Query: 646 QVP-----------RDDSAFDRMYGIVYARNKDRKKLKIATCFKIVGEIPLRGARTNGQE 792
           Q P            DD   DR +G+V+ R   R KL            P  G  ++ +E
Sbjct: 113 QRPPPEPEDLANGDGDDDGSDRRFGLVFTRKHKRAKL-----------APF-GLCSSSRE 160

Query: 793 LESRKSTGNLAEKLTILDGDRWDGFSRSVVLAVLVESSRNGCVERFARFLLSVLSW 960
           L    ST  L E    L G      SRS VL VLV++S  G   RF+R LL VL W
Sbjct: 161 L---ASTVGLLEDAHFLGGAVG---SRSAVLVVLVDASSPGSSSRFSRLLLPVLLW 210


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