BLASTX nr result
ID: Stemona21_contig00027067
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00027067
(342 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC75114.1| hypothetical protein OsI_11294 [Oryza sativa Indi... 113 3e-23
ref|NP_001049931.1| Os03g0314100 [Oryza sativa Japonica Group] g... 113 3e-23
gb|ABF95605.1| Pre-mRNA splicing factor ATP-dependent RNA helica... 113 3e-23
gb|EMT32166.1| Putative pre-mRNA-splicing factor ATP-dependent R... 112 4e-23
ref|XP_003558051.1| PREDICTED: probable pre-mRNA-splicing factor... 112 4e-23
ref|XP_004984587.1| PREDICTED: probable pre-mRNA-splicing factor... 112 5e-23
ref|XP_006649980.1| PREDICTED: probable pre-mRNA-splicing factor... 111 9e-23
ref|XP_002467958.1| hypothetical protein SORBIDRAFT_01g037170 [S... 111 9e-23
ref|NP_001148911.1| pre-mRNA-splicing factor ATP-dependent RNA h... 111 1e-22
emb|CBI36976.3| unnamed protein product [Vitis vinifera] 110 3e-22
ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor... 110 3e-22
gb|EMJ22755.1| hypothetical protein PRUPE_ppa002008mg [Prunus pe... 109 3e-22
gb|ACN28016.1| unknown [Zea mays] gi|414866511|tpg|DAA45068.1| T... 109 4e-22
gb|EXB55979.1| putative pre-mRNA-splicing factor ATP-dependent R... 108 7e-22
ref|XP_002320963.2| hypothetical protein POPTR_0014s11320g [Popu... 108 1e-21
gb|EPS66757.1| hypothetical protein M569_08016, partial [Genlise... 106 3e-21
gb|EOX95342.1| Pre-mRNA-splicing factor ATP-dependent RNA helica... 106 3e-21
gb|EOX95341.1| RNA helicase family protein isoform 10 [Theobroma... 106 3e-21
gb|EOX95339.1| RNA helicase family protein isoform 8 [Theobroma ... 106 3e-21
gb|EOX95338.1| RNA helicase family protein isoform 7 [Theobroma ... 106 3e-21
>gb|EEC75114.1| hypothetical protein OsI_11294 [Oryza sativa Indica Group]
Length = 130
Score = 113 bits (282), Expect = 3e-23
Identities = 61/88 (69%), Positives = 72/88 (81%), Gaps = 3/88 (3%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKL---AHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEI 257
M TERKRKVSLFDVVD++S+S+KL A +NG ++ AA P SI+RWTGRPYS RYLEI
Sbjct: 1 MGTERKRKVSLFDVVDETSVSAKLGRAATTNGSAAAAAANP--SINRWTGRPYSARYLEI 58
Query: 258 LEKRRTLIVWKQKEEFLQALRANQTLIL 341
LEKRRTL VW+QK++FL LR NQTLIL
Sbjct: 59 LEKRRTLPVWQQKDDFLAVLRDNQTLIL 86
>ref|NP_001049931.1| Os03g0314100 [Oryza sativa Japonica Group]
gi|108707809|gb|ABF95604.1| Pre-mRNA splicing factor
ATP-dependent RNA helicase, putative, expressed [Oryza
sativa Japonica Group] gi|113548402|dbj|BAF11845.1|
Os03g0314100 [Oryza sativa Japonica Group]
gi|215694063|dbj|BAG89262.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 564
Score = 113 bits (282), Expect = 3e-23
Identities = 61/88 (69%), Positives = 72/88 (81%), Gaps = 3/88 (3%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKL---AHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEI 257
M TERKRKVSLFDVVD++S+S+KL A +NG ++ AA P SI+RWTGRPYS RYLEI
Sbjct: 1 MGTERKRKVSLFDVVDETSVSAKLGRAATTNGSAAAAAANP--SINRWTGRPYSARYLEI 58
Query: 258 LEKRRTLIVWKQKEEFLQALRANQTLIL 341
LEKRRTL VW+QK++FL LR NQTLIL
Sbjct: 59 LEKRRTLPVWQQKDDFLAVLRDNQTLIL 86
>gb|ABF95605.1| Pre-mRNA splicing factor ATP-dependent RNA helicase, putative,
expressed [Oryza sativa Japonica Group]
Length = 722
Score = 113 bits (282), Expect = 3e-23
Identities = 61/88 (69%), Positives = 72/88 (81%), Gaps = 3/88 (3%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKL---AHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEI 257
M TERKRKVSLFDVVD++S+S+KL A +NG ++ AA P SI+RWTGRPYS RYLEI
Sbjct: 1 MGTERKRKVSLFDVVDETSVSAKLGRAATTNGSAAAAAANP--SINRWTGRPYSARYLEI 58
Query: 258 LEKRRTLIVWKQKEEFLQALRANQTLIL 341
LEKRRTL VW+QK++FL LR NQTLIL
Sbjct: 59 LEKRRTLPVWQQKDDFLAVLRDNQTLIL 86
>gb|EMT32166.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
[Aegilops tauschii]
Length = 697
Score = 112 bits (281), Expect = 4e-23
Identities = 57/85 (67%), Positives = 67/85 (78%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKLAHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEILEK 266
M TERKRKVSLFDVVD++S+S+KL + + AA SI+RW GRPYS RYLEILEK
Sbjct: 1 MGTERKRKVSLFDVVDETSVSAKLGRAGINGAAAAAAANPSINRWNGRPYSARYLEILEK 60
Query: 267 RRTLIVWKQKEEFLQALRANQTLIL 341
RRTL VW+QK+EFL+ LR NQTLIL
Sbjct: 61 RRTLPVWQQKDEFLRVLRDNQTLIL 85
>ref|XP_003558051.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Brachypodium distachyon]
Length = 719
Score = 112 bits (281), Expect = 4e-23
Identities = 59/85 (69%), Positives = 69/85 (81%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKLAHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEILEK 266
M TERKRKVSLFDVVD++S+S+KL + + AA P SI++W GRPYS RYLEILEK
Sbjct: 1 MGTERKRKVSLFDVVDETSVSAKLGRAGVNGAAAAANP--SINKWNGRPYSARYLEILEK 58
Query: 267 RRTLIVWKQKEEFLQALRANQTLIL 341
RRTL VW+QKEEFL+ALR NQTLIL
Sbjct: 59 RRTLPVWQQKEEFLRALRDNQTLIL 83
>ref|XP_004984587.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Setaria italica]
Length = 723
Score = 112 bits (280), Expect = 5e-23
Identities = 58/87 (66%), Positives = 71/87 (81%), Gaps = 2/87 (2%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKL--AHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEIL 260
M TERKRKVSLFDVVD++S+S+KL A +NG ++ AA +++RW GRPYS RY EIL
Sbjct: 1 MGTERKRKVSLFDVVDETSVSAKLGRAATNGAAAAAAGGANPTVNRWNGRPYSGRYFEIL 60
Query: 261 EKRRTLIVWKQKEEFLQALRANQTLIL 341
EKRRTL VW+QK+EFL+ALR NQTLIL
Sbjct: 61 EKRRTLPVWQQKDEFLRALRDNQTLIL 87
>ref|XP_006649980.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Oryza brachyantha]
Length = 721
Score = 111 bits (278), Expect = 9e-23
Identities = 57/85 (67%), Positives = 67/85 (78%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKLAHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEILEK 266
M TERKR+VSLFDVVD++S+S+KL + + AA SI+RWTGRPYS RYLEILEK
Sbjct: 1 MGTERKRQVSLFDVVDETSVSAKLGRAATTNGAAAAGANPSINRWTGRPYSARYLEILEK 60
Query: 267 RRTLIVWKQKEEFLQALRANQTLIL 341
RRTL VW+QK+EFL LR NQTLIL
Sbjct: 61 RRTLPVWQQKDEFLTVLRDNQTLIL 85
>ref|XP_002467958.1| hypothetical protein SORBIDRAFT_01g037170 [Sorghum bicolor]
gi|241921812|gb|EER94956.1| hypothetical protein
SORBIDRAFT_01g037170 [Sorghum bicolor]
Length = 692
Score = 111 bits (278), Expect = 9e-23
Identities = 60/87 (68%), Positives = 72/87 (82%), Gaps = 2/87 (2%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKL--AHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEIL 260
M TERKRKVSLFDVVD++S+S+KL A SNG ++TAA S++RW GRPY+ RY EIL
Sbjct: 1 MGTERKRKVSLFDVVDETSVSAKLGRAASNGAAATAAG-GNPSVNRWNGRPYTARYFEIL 59
Query: 261 EKRRTLIVWKQKEEFLQALRANQTLIL 341
EKRRTL VW+QKEEFL++LR NQTLIL
Sbjct: 60 EKRRTLPVWQQKEEFLRSLRDNQTLIL 86
>ref|NP_001148911.1| pre-mRNA-splicing factor ATP-dependent RNA helicase [Zea mays]
gi|195623176|gb|ACG33418.1| pre-mRNA-splicing factor
ATP-dependent RNA helicase [Zea mays]
gi|413955897|gb|AFW88546.1| putative RNA helicase family
protein [Zea mays]
Length = 722
Score = 111 bits (277), Expect = 1e-22
Identities = 60/87 (68%), Positives = 70/87 (80%), Gaps = 2/87 (2%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKL--AHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEIL 260
M TERKRKVSLFDVVD++S+S KL A SNG ++TAA S++RW GRPY+ RY EIL
Sbjct: 1 MGTERKRKVSLFDVVDETSVSGKLGRAASNGAAATAAGTNP-SVNRWNGRPYTARYFEIL 59
Query: 261 EKRRTLIVWKQKEEFLQALRANQTLIL 341
EKRRTL VW+QKEEFL+ LR NQTLIL
Sbjct: 60 EKRRTLPVWQQKEEFLRRLRDNQTLIL 86
>emb|CBI36976.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 110 bits (274), Expect = 3e-22
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKLAHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEILEK 266
M TERKRKVSLFDVVD++S+S+K++ SNG + ++RW GRPYS RY EILEK
Sbjct: 1 MGTERKRKVSLFDVVDETSVSAKISKSNGSGAINNNNNNNLVNRWNGRPYSQRYYEILEK 60
Query: 267 RRTLIVWKQKEEFLQALRANQTLIL 341
RRTL VW QKEEFLQ L+ANQ+LIL
Sbjct: 61 RRTLPVWHQKEEFLQVLKANQSLIL 85
>ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase [Vitis vinifera] gi|147787427|emb|CAN64445.1|
hypothetical protein VITISV_036050 [Vitis vinifera]
Length = 728
Score = 110 bits (274), Expect = 3e-22
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKLAHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEILEK 266
M TERKRKVSLFDVVD++S+S+K++ SNG + ++RW GRPYS RY EILEK
Sbjct: 1 MGTERKRKVSLFDVVDETSVSAKISKSNGSGAINNNNNNNLVNRWNGRPYSQRYYEILEK 60
Query: 267 RRTLIVWKQKEEFLQALRANQTLIL 341
RRTL VW QKEEFLQ L+ANQ+LIL
Sbjct: 61 RRTLPVWHQKEEFLQVLKANQSLIL 85
>gb|EMJ22755.1| hypothetical protein PRUPE_ppa002008mg [Prunus persica]
Length = 730
Score = 109 bits (273), Expect = 3e-22
Identities = 59/88 (67%), Positives = 71/88 (80%), Gaps = 3/88 (3%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISS-KLAHSNGFSSTAAPVPAAS--IHRWTGRPYSHRYLEI 257
M TERKRKVSLFDVVD++S+SS K++ SNG + A A S I+RWTG+PYS RY EI
Sbjct: 1 MGTERKRKVSLFDVVDETSVSSAKMSKSNGGAGATANHNAVSNLINRWTGKPYSQRYYEI 60
Query: 258 LEKRRTLIVWKQKEEFLQALRANQTLIL 341
LEKR+TL VW QKEEFLQAL+A+Q+LIL
Sbjct: 61 LEKRKTLPVWHQKEEFLQALKASQSLIL 88
>gb|ACN28016.1| unknown [Zea mays] gi|414866511|tpg|DAA45068.1| TPA: putative RNA
helicase family protein [Zea mays]
Length = 721
Score = 109 bits (272), Expect = 4e-22
Identities = 58/86 (67%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKL-AHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEILE 263
M TERKRKVSLFDVVD++S+S+KL A SNG ++TA S++RW GRPY+ RY +ILE
Sbjct: 1 MGTERKRKVSLFDVVDETSVSAKLRAASNGAAATATG-GNPSVNRWNGRPYTARYFDILE 59
Query: 264 KRRTLIVWKQKEEFLQALRANQTLIL 341
KRRTL VW+QKEEFL++LR NQTLIL
Sbjct: 60 KRRTLPVWQQKEEFLRSLRDNQTLIL 85
>gb|EXB55979.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Morus
notabilis]
Length = 922
Score = 108 bits (270), Expect = 7e-22
Identities = 54/86 (62%), Positives = 69/86 (80%), Gaps = 1/86 (1%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKLAHSNGFSSTAAPVPAAS-IHRWTGRPYSHRYLEILE 263
M TERKRKVSLFDVVD++S+S+K+A++NG P+ S ++ WTG+PYS RY EILE
Sbjct: 197 MGTERKRKVSLFDVVDETSVSAKIANTNG---AGGPMAGNSLVNTWTGKPYSQRYFEILE 253
Query: 264 KRRTLIVWKQKEEFLQALRANQTLIL 341
KR+TL VW+QK+EF+Q LR NQTLIL
Sbjct: 254 KRKTLPVWQQKDEFMQVLRNNQTLIL 279
>ref|XP_002320963.2| hypothetical protein POPTR_0014s11320g [Populus trichocarpa]
gi|550323982|gb|EEE99278.2| hypothetical protein
POPTR_0014s11320g [Populus trichocarpa]
Length = 729
Score = 108 bits (269), Expect = 1e-21
Identities = 52/85 (61%), Positives = 66/85 (77%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKLAHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEILEK 266
M TERKRKVSLFDVVD++S+S+KL SNG ++ ++SI+RW G+PYS RY EILEK
Sbjct: 2 MGTERKRKVSLFDVVDEASVSAKLLKSNGATNNNNNEGSSSINRWNGKPYSQRYYEILEK 61
Query: 267 RRTLIVWKQKEEFLQALRANQTLIL 341
R+ L VW QKE+FLQ L+ NQ L+L
Sbjct: 62 RKNLPVWHQKEDFLQVLKKNQVLVL 86
>gb|EPS66757.1| hypothetical protein M569_08016, partial [Genlisea aurea]
Length = 720
Score = 106 bits (265), Expect = 3e-21
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKLAHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEILEK 266
M TERKRKVSLFDVVD+++ S K+ SNG ++ AA +P+ ++++W GRPYS RY EILEK
Sbjct: 1 MGTERKRKVSLFDVVDETA-SGKILRSNG-AAAAAALPS-TVNKWNGRPYSQRYYEILEK 57
Query: 267 RRTLIVWKQKEEFLQALRANQTLIL 341
R+TL VW QK+EFLQALR NQTLIL
Sbjct: 58 RKTLPVWHQKQEFLQALRENQTLIL 82
>gb|EOX95342.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 11
[Theobroma cacao]
Length = 557
Score = 106 bits (265), Expect = 3e-21
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKLAHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEILEK 266
M TERKRKVSLFDVVD++S +K++ SNG A V + SI++W GRPYS RY EILEK
Sbjct: 1 MGTERKRKVSLFDVVDETS--AKISKSNGGGIAAMNVNS-SINKWNGRPYSQRYYEILEK 57
Query: 267 RRTLIVWKQKEEFLQALRANQTLIL 341
R+TL VW+QKEEFLQ L+ANQTLIL
Sbjct: 58 RKTLPVWQQKEEFLQVLKANQTLIL 82
>gb|EOX95341.1| RNA helicase family protein isoform 10 [Theobroma cacao]
Length = 538
Score = 106 bits (265), Expect = 3e-21
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKLAHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEILEK 266
M TERKRKVSLFDVVD++S +K++ SNG A V + SI++W GRPYS RY EILEK
Sbjct: 1 MGTERKRKVSLFDVVDETS--AKISKSNGGGIAAMNVNS-SINKWNGRPYSQRYYEILEK 57
Query: 267 RRTLIVWKQKEEFLQALRANQTLIL 341
R+TL VW+QKEEFLQ L+ANQTLIL
Sbjct: 58 RKTLPVWQQKEEFLQVLKANQTLIL 82
>gb|EOX95339.1| RNA helicase family protein isoform 8 [Theobroma cacao]
Length = 544
Score = 106 bits (265), Expect = 3e-21
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKLAHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEILEK 266
M TERKRKVSLFDVVD++S +K++ SNG A V + SI++W GRPYS RY EILEK
Sbjct: 1 MGTERKRKVSLFDVVDETS--AKISKSNGGGIAAMNVNS-SINKWNGRPYSQRYYEILEK 57
Query: 267 RRTLIVWKQKEEFLQALRANQTLIL 341
R+TL VW+QKEEFLQ L+ANQTLIL
Sbjct: 58 RKTLPVWQQKEEFLQVLKANQTLIL 82
>gb|EOX95338.1| RNA helicase family protein isoform 7 [Theobroma cacao]
Length = 572
Score = 106 bits (265), Expect = 3e-21
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = +3
Query: 87 MATERKRKVSLFDVVDDSSISSKLAHSNGFSSTAAPVPAASIHRWTGRPYSHRYLEILEK 266
M TERKRKVSLFDVVD++S +K++ SNG A V + SI++W GRPYS RY EILEK
Sbjct: 1 MGTERKRKVSLFDVVDETS--AKISKSNGGGIAAMNVNS-SINKWNGRPYSQRYYEILEK 57
Query: 267 RRTLIVWKQKEEFLQALRANQTLIL 341
R+TL VW+QKEEFLQ L+ANQTLIL
Sbjct: 58 RKTLPVWQQKEEFLQVLKANQTLIL 82