BLASTX nr result

ID: Stemona21_contig00026018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00026018
         (487 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873423.1| hypothetical protein ARALYDRAFT_487800 [Arab...    55   7e-06

>ref|XP_002873423.1| hypothetical protein ARALYDRAFT_487800 [Arabidopsis lyrata subsp.
           lyrata] gi|297319260|gb|EFH49682.1| hypothetical protein
           ARALYDRAFT_487800 [Arabidopsis lyrata subsp. lyrata]
          Length = 379

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
 Frame = -3

Query: 242 RSLAEIMREAKPAPPVTDEV----YSXXXXXXXXXXXXXXXXXXXXXXXRGFHLACLRPI 75
           +S+AEIM ++ P     +E     YS                       RGFH+ CLRPI
Sbjct: 38  KSMAEIMAKSVPVVEQEEEEDEDSYSDVTCEKCGSGEGDDELLLCDKCDRGFHMKCLRPI 97

Query: 74  LPRVPSGPWFCAECADARPPQR 9
           + RVP GPW C +C+D RP +R
Sbjct: 98  VVRVPIGPWLCVDCSDQRPVRR 119


Top