BLASTX nr result
ID: Stemona21_contig00024729
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00024729
(612 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp... 167 2e-39
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp... 155 6e-36
ref|XP_004973285.1| PREDICTED: chloroplastic group IIA intron sp... 154 1e-35
ref|XP_004973284.1| PREDICTED: chloroplastic group IIA intron sp... 154 1e-35
gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitat... 153 4e-35
ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citr... 153 4e-35
ref|XP_006842364.1| hypothetical protein AMTR_s00079p00185530 [A... 151 2e-34
ref|XP_003573775.1| PREDICTED: chloroplastic group IIA intron sp... 147 2e-33
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm... 144 1e-32
ref|NP_001105008.1| chloroplastic group IIA intron splicing faci... 143 4e-32
tpg|DAA49210.1| TPA: chloroplast RNA splicing1 [Zea mays] 142 6e-32
tpg|DAA49209.1| TPA: chloroplast RNA splicing1 [Zea mays] 142 6e-32
tpg|DAA49208.1| TPA: chloroplast RNA splicing1 [Zea mays] 142 6e-32
ref|XP_002444215.1| hypothetical protein SORBIDRAFT_07g015120 [S... 142 1e-31
ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron sp... 140 2e-31
ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron sp... 140 2e-31
ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron sp... 140 2e-31
ref|XP_002306656.2| hypothetical protein POPTR_0005s15420g [Popu... 140 4e-31
ref|XP_002329296.1| predicted protein [Populus trichocarpa] 140 4e-31
ref|NP_001061635.1| Os08g0360100 [Oryza sativa Japonica Group] g... 138 1e-30
>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1184
Score = 167 bits (423), Expect = 2e-39
Identities = 97/183 (53%), Positives = 120/183 (65%), Gaps = 1/183 (0%)
Frame = +1
Query: 67 DLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEISVDFAARLQEAMVAAGDEEG 246
D SLT KVSGGRG KAM+ I+ + KL+ + D ET E + +F + ++ G +E
Sbjct: 113 DRSLTEKVSGGRGAKAMKKIMQSIVKLQETHTSD-ETQENTEEFEFGV--SLEGIGGDEN 169
Query: 247 QKVKGT-PWATAEGRKLVFPREKKERVVTAAEWALPGPLLARLRSEARGMKKWVRAKKAG 423
++ G PW E K+VF R KKE+VVTAAE L LL RLR EA M+KWV+ KKAG
Sbjct: 170 SRIGGKMPWLKTE--KVVFRRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAG 227
Query: 424 VTDEVVEEIRRTWRSSELAMVKIVEPLRRNMDRAHEIIETKTGRLVVWRKKDVLVVYRGG 603
VT+ VV++I W+S ELAMVK PL RNMDRA EI+E KT LV+W KKD LVVYRG
Sbjct: 228 VTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGS 287
Query: 604 NCQ 612
N Q
Sbjct: 288 NYQ 290
>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X1 [Citrus sinensis]
gi|568857343|ref|XP_006482226.1| PREDICTED:
chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X2 [Citrus sinensis]
Length = 771
Score = 155 bits (393), Expect = 6e-36
Identities = 90/180 (50%), Positives = 111/180 (61%), Gaps = 2/180 (1%)
Frame = +1
Query: 67 DLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEI--SVDFAARLQEAMVAAGDE 240
D LTAK SG RG++AM+ II + KL++ D ++ +F +E + D
Sbjct: 88 DKGLTAKESGVRGKQAMKKIIENIEKLQKDQILDETQKKVMEKFEFKGCFEENVSHEEDL 147
Query: 241 EGQKVKGTPWATAEGRKLVFPREKKERVVTAAEWALPGPLLARLRSEARGMKKWVRAKKA 420
G PW + + VF R KKER+VT AE L G LL RL+ EAR M+KWV+ KKA
Sbjct: 148 RGGFGGKVPWLRED--RFVFRRMKKERMVTKAETMLDGELLERLKDEARKMRKWVKVKKA 205
Query: 421 GVTDEVVEEIRRTWRSSELAMVKIVEPLRRNMDRAHEIIETKTGRLVVWRKKDVLVVYRG 600
GVT+ VV EIR WR +ELAMVK PL RNMDRA EI+E KTG LV+W KKD VVYRG
Sbjct: 206 GVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRG 265
>ref|XP_004973285.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X2 [Setaria italica]
Length = 736
Score = 154 bits (390), Expect = 1e-35
Identities = 100/213 (46%), Positives = 118/213 (55%), Gaps = 14/213 (6%)
Frame = +1
Query: 16 SKPTRTEANPDDA----DRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDP---- 171
+KP A P A + A LTA V GGR R+A+ II + L S P P
Sbjct: 49 NKPRHHSAQPAPARNTGSKTAAKPLTAGVPGGRTRRAVLGIIRRVRSLELSDPPGPVPAP 108
Query: 172 ---ETTEISVDFAARLQEAMVAAGDEEGQKVKGTPWATA--EGRKLVFPREKKERVVTAA 336
+V F ++ A E K + PWA A EG K+ REKK R T A
Sbjct: 109 ARNNDAAAAVPFHLPIEPREQAREAVEKGKARAVPWAAARDEGLKVALRREKKAREPTRA 168
Query: 337 EWALPGPLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTW-RSSELAMVKIVEPLRRN 513
E L L RL+ ARGM +W RAKKAGVTDEVVE++RR W R ELA V+IVEPLRRN
Sbjct: 169 EAELEAGELDRLQRLARGMGRWARAKKAGVTDEVVEDLRREWARGEELAAVRIVEPLRRN 228
Query: 514 MDRAHEIIETKTGRLVVWRKKDVLVVYRGGNCQ 612
MDRA EI+E KTG LV+W K D+ VYRG N Q
Sbjct: 229 MDRAREILEIKTGGLVIWTKGDIHFVYRGSNYQ 261
>ref|XP_004973284.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X1 [Setaria italica]
Length = 748
Score = 154 bits (390), Expect = 1e-35
Identities = 100/213 (46%), Positives = 118/213 (55%), Gaps = 14/213 (6%)
Frame = +1
Query: 16 SKPTRTEANPDDA----DRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDP---- 171
+KP A P A + A LTA V GGR R+A+ II + L S P P
Sbjct: 49 NKPRHHSAQPAPARNTGSKTAAKPLTAGVPGGRTRRAVLGIIRRVRSLELSDPPGPVPAP 108
Query: 172 ---ETTEISVDFAARLQEAMVAAGDEEGQKVKGTPWATA--EGRKLVFPREKKERVVTAA 336
+V F ++ A E K + PWA A EG K+ REKK R T A
Sbjct: 109 ARNNDAAAAVPFHLPIEPREQAREAVEKGKARAVPWAAARDEGLKVALRREKKAREPTRA 168
Query: 337 EWALPGPLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTW-RSSELAMVKIVEPLRRN 513
E L L RL+ ARGM +W RAKKAGVTDEVVE++RR W R ELA V+IVEPLRRN
Sbjct: 169 EAELEAGELDRLQRLARGMGRWARAKKAGVTDEVVEDLRREWARGEELAAVRIVEPLRRN 228
Query: 514 MDRAHEIIETKTGRLVVWRKKDVLVVYRGGNCQ 612
MDRA EI+E KTG LV+W K D+ VYRG N Q
Sbjct: 229 MDRAREILEIKTGGLVIWTKGDIHFVYRGSNYQ 261
>gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 828
Score = 153 bits (386), Expect = 4e-35
Identities = 93/209 (44%), Positives = 130/209 (62%), Gaps = 7/209 (3%)
Frame = +1
Query: 7 HRLSKPTRTEANPDDADRLADLS---LTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPET 177
H ++ ++ E + ++R A+ S LT K+ G RG+ ++ I + +L R D E
Sbjct: 79 HEVTDLSKPENDNKFSNRKAEKSVNGLTDKLVGRRGKNVIKKIARRIEELGRKSKVDSEE 138
Query: 178 TEISVDFAAR--LQEAMVAAGDEE--GQKVKGTPWATAEGRKLVFPREKKERVVTAAEWA 345
T+ DF + + + + G+ G+++ PW EG VF R KKE++V++AE
Sbjct: 139 TQ--KDFVGKNGIGDCLEGLGESRSGGERM---PWEKDEG--FVFRRMKKEKIVSSAELR 191
Query: 346 LPGPLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTWRSSELAMVKIVEPLRRNMDRA 525
L LL RLRSEAR M+KWV+ KKAGVT EVVE+++ W+S+ELAMVK PL RNMDRA
Sbjct: 192 LERELLERLRSEARKMRKWVKVKKAGVTKEVVEDVKFVWKSNELAMVKFDVPLCRNMDRA 251
Query: 526 HEIIETKTGRLVVWRKKDVLVVYRGGNCQ 612
EI+E KTG LVVWR+KD V+YRG N Q
Sbjct: 252 QEILEMKTGGLVVWRRKDAQVIYRGCNYQ 280
>ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
gi|557532797|gb|ESR43980.1| hypothetical protein
CICLE_v10013368mg [Citrus clementina]
Length = 770
Score = 153 bits (386), Expect = 4e-35
Identities = 92/181 (50%), Positives = 112/181 (61%), Gaps = 3/181 (1%)
Frame = +1
Query: 67 DLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEISVD---FAARLQEAMVAAGD 237
D LTAK SG RG++AM+ II + KL++ D ET + ++ F +E D
Sbjct: 94 DKGLTAKESGVRGKQAMKKIIENIEKLQKDQILD-ETQKKDMEKFEFRGCFEENGSDEED 152
Query: 238 EEGQKVKGTPWATAEGRKLVFPREKKERVVTAAEWALPGPLLARLRSEARGMKKWVRAKK 417
G PW E + VF R KKER+VT AE L G L+ RL+ EAR M+KWV+ KK
Sbjct: 153 LRGGFGGKVPWLREE--RFVFRRMKKERMVTKAETMLDGELIERLKDEARKMRKWVKVKK 210
Query: 418 AGVTDEVVEEIRRTWRSSELAMVKIVEPLRRNMDRAHEIIETKTGRLVVWRKKDVLVVYR 597
AGVT+ VV EIR WR +ELAMVK PL RNMDRA EI+E KTG LV+W KKD VVYR
Sbjct: 211 AGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYR 270
Query: 598 G 600
G
Sbjct: 271 G 271
>ref|XP_006842364.1| hypothetical protein AMTR_s00079p00185530 [Amborella trichopoda]
gi|548844430|gb|ERN04039.1| hypothetical protein
AMTR_s00079p00185530 [Amborella trichopoda]
Length = 886
Score = 151 bits (381), Expect = 2e-34
Identities = 95/222 (42%), Positives = 123/222 (55%), Gaps = 24/222 (10%)
Frame = +1
Query: 13 LSKPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEI-- 186
LSK + +N ++D D +LT V GGR + AMR I+ +TKL+ + + E
Sbjct: 203 LSKSRKKSSNEMNSD---DKALTGGVRGGRSKHAMRLIMENITKLKEIHEENEQKKETHI 259
Query: 187 ----SVDFAARLQEAM------------------VAAGDEEGQKVKGTPWATAEGRKLVF 300
VD +++ + V+ +++ + K PW AE K VF
Sbjct: 260 VLSDEVDIRSKINSSFSEGATKSIEAGFNLPLKEVSVSEDQAMETK-LPWTMAE--KNVF 316
Query: 301 PREKKERVVTAAEWALPGPLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTWRSSELA 480
R KKE+ T AE +LP PLL RLR R + KWV+ KKAGVT EV+ EI W+ ELA
Sbjct: 317 RRVKKEKTPTKAELSLPKPLLTRLRDRGRTLTKWVKVKKAGVTQEVMNEIYAVWKKRELA 376
Query: 481 MVKIVEPLRRNMDRAHEIIETKTGRLVVWRKKDVLVVYRGGN 606
M+K PL RNMDRA EI+ETKTG LVVWRKK LVVYRG N
Sbjct: 377 MLKFDVPLCRNMDRATEIVETKTGGLVVWRKKGTLVVYRGTN 418
>ref|XP_003573775.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 730
Score = 147 bits (372), Expect = 2e-33
Identities = 98/214 (45%), Positives = 120/214 (56%), Gaps = 14/214 (6%)
Frame = +1
Query: 7 HRLSKPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETT-- 180
H KP R+ ++ + LT V GGR R+A+ II + L S P +P
Sbjct: 44 HNDPKPQRSNSSTTNP-------LTTGVPGGRTRRAVLGIIRRVRSLELSNPPNPRPRPS 96
Query: 181 -------EISVDFAARLQEAMVAAGDEEGQ--KVKGTPWATA--EGRKLVFPREKKERVV 327
+ +D QE A DE+G+ K + PW+ A E K+V REKK R
Sbjct: 97 TSGNIPFHLPIDRPQEGQEEEEAGKDEKGKLTKSRAVPWSAARDEHLKVVLRREKKVREP 156
Query: 328 TAAEWALPGPLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTWRS-SELAMVKIVEPL 504
T AE L LL RLR ARGM +W RAKKAGVTDEVVE++R W S ELA V+IVEPL
Sbjct: 157 TRAERELGPALLERLRRAARGMDRWARAKKAGVTDEVVEDVRSEWSSGQELAGVRIVEPL 216
Query: 505 RRNMDRAHEIIETKTGRLVVWRKKDVLVVYRGGN 606
RR MDRA EI+E KTG LVVW K D+ VYRG +
Sbjct: 217 RRCMDRAREILEIKTGGLVVWTKGDIHFVYRGSD 250
>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
gi|223544130|gb|EEF45655.1| conserved hypothetical
protein [Ricinus communis]
Length = 742
Score = 144 bits (364), Expect = 1e-32
Identities = 89/207 (42%), Positives = 119/207 (57%), Gaps = 9/207 (4%)
Frame = +1
Query: 13 LSKPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDP------- 171
LSKP ++ + +D LT K SG RG+KAM I+ + +L+ + +
Sbjct: 80 LSKPRNKNSSNNANIEKSDKVLTGKESGVRGKKAMEKIVKSIEQLQENQALEKTQCDSQA 139
Query: 172 -ETTEISVD-FAARLQEAMVAAGDEEGQKVKGTPWATAEGRKLVFPREKKERVVTAAEWA 345
E T++ + F + ++ + G K PW E K V+ R KKE+ VT AE
Sbjct: 140 YEKTQLDSEAFEIGEKLGLIREHGDFGVNKKLKPWEREE--KFVYWRIKKEKAVTKAELI 197
Query: 346 LPGPLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTWRSSELAMVKIVEPLRRNMDRA 525
L LL LR+EA M+KWV+ KAGVT VV++IR WR++ELAMVK PL RNMDRA
Sbjct: 198 LEKELLEILRTEASKMRKWVKVMKAGVTQSVVDQIRYAWRNNELAMVKFDLPLCRNMDRA 257
Query: 526 HEIIETKTGRLVVWRKKDVLVVYRGGN 606
EI+E KTG LVVW +KD LV+YRG N
Sbjct: 258 REIVELKTGGLVVWTRKDSLVIYRGCN 284
>ref|NP_001105008.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic precursor [Zea mays]
gi|75173308|sp|Q9FYT6.1|CRS1_MAIZE RecName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|9837550|gb|AAG00595.1|AF290414_1 CRS1 [Zea mays]
Length = 715
Score = 143 bits (360), Expect = 4e-32
Identities = 98/210 (46%), Positives = 116/210 (55%), Gaps = 12/210 (5%)
Frame = +1
Query: 19 KPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEISVDF 198
K T+T A P LTA V GGR +A+ II + L S P + S
Sbjct: 60 KNTKTAAKP----------LTAGVPGGRTHRAVLGIIRRVRSLELSDAPSPNSVHTSNSG 109
Query: 199 AARLQEAM---VAAGDEEGQ------KVKGTPWATA--EGRKLVFPREKKERVVTAAEWA 345
AA + ++ E GQ K + PWA A EG K+ REKK R T AE
Sbjct: 110 AAAAAFHLTIELSPPREPGQYVVEKEKSRAVPWAAARDEGLKVALRREKKPREPTRAETE 169
Query: 346 LPGPLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTWRS-SELAMVKIVEPLRRNMDR 522
L L RLR ARG+ +W RAKKAGVTDEVV+E+RR W S ELA V+IVEPLRR+MDR
Sbjct: 170 LETHELRRLRRLARGIGRWARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDR 229
Query: 523 AHEIIETKTGRLVVWRKKDVLVVYRGGNCQ 612
A EI+E KTG LVVW K D+ VYRG Q
Sbjct: 230 AREILEIKTGGLVVWTKGDMHFVYRGSKYQ 259
>tpg|DAA49210.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 467
Score = 142 bits (359), Expect = 6e-32
Identities = 98/210 (46%), Positives = 116/210 (55%), Gaps = 12/210 (5%)
Frame = +1
Query: 19 KPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEISVDF 198
K T+T A P LTA V GGR +A+ II + L S P + S
Sbjct: 60 KNTKTAAKP----------LTAGVPGGRTHRAVLGIIRRVRSLELSDAPSPNSVHTSNSG 109
Query: 199 AARLQEAM---VAAGDEEGQ------KVKGTPWATA--EGRKLVFPREKKERVVTAAEWA 345
AA + ++ E GQ K + PWA A EG K+ REKK R T AE
Sbjct: 110 AAAAAFHLTIELSPPREPGQYVVEKEKSRAVPWAAARDEGLKVALRREKKPREPTRAETE 169
Query: 346 LPGPLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTWRS-SELAMVKIVEPLRRNMDR 522
L L RLR ARG+ +W RAKKAGVTDEVV+E+RR W S ELA V+IVEPLRR+MDR
Sbjct: 170 LETHELHRLRRLARGIGRWARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDR 229
Query: 523 AHEIIETKTGRLVVWRKKDVLVVYRGGNCQ 612
A EI+E KTG LVVW K D+ VYRG Q
Sbjct: 230 AREILEIKTGGLVVWTKGDMHFVYRGSKYQ 259
>tpg|DAA49209.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 715
Score = 142 bits (359), Expect = 6e-32
Identities = 98/210 (46%), Positives = 116/210 (55%), Gaps = 12/210 (5%)
Frame = +1
Query: 19 KPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEISVDF 198
K T+T A P LTA V GGR +A+ II + L S P + S
Sbjct: 60 KNTKTAAKP----------LTAGVPGGRTHRAVLGIIRRVRSLELSDAPSPNSVHTSNSG 109
Query: 199 AARLQEAM---VAAGDEEGQ------KVKGTPWATA--EGRKLVFPREKKERVVTAAEWA 345
AA + ++ E GQ K + PWA A EG K+ REKK R T AE
Sbjct: 110 AAAAAFHLTIELSPPREPGQYVVEKEKSRAVPWAAARDEGLKVALRREKKPREPTRAETE 169
Query: 346 LPGPLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTWRS-SELAMVKIVEPLRRNMDR 522
L L RLR ARG+ +W RAKKAGVTDEVV+E+RR W S ELA V+IVEPLRR+MDR
Sbjct: 170 LETHELHRLRRLARGIGRWARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDR 229
Query: 523 AHEIIETKTGRLVVWRKKDVLVVYRGGNCQ 612
A EI+E KTG LVVW K D+ VYRG Q
Sbjct: 230 AREILEIKTGGLVVWTKGDMHFVYRGSKYQ 259
>tpg|DAA49208.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 496
Score = 142 bits (359), Expect = 6e-32
Identities = 98/210 (46%), Positives = 116/210 (55%), Gaps = 12/210 (5%)
Frame = +1
Query: 19 KPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEISVDF 198
K T+T A P LTA V GGR +A+ II + L S P + S
Sbjct: 60 KNTKTAAKP----------LTAGVPGGRTHRAVLGIIRRVRSLELSDAPSPNSVHTSNSG 109
Query: 199 AARLQEAM---VAAGDEEGQ------KVKGTPWATA--EGRKLVFPREKKERVVTAAEWA 345
AA + ++ E GQ K + PWA A EG K+ REKK R T AE
Sbjct: 110 AAAAAFHLTIELSPPREPGQYVVEKEKSRAVPWAAARDEGLKVALRREKKPREPTRAETE 169
Query: 346 LPGPLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTWRS-SELAMVKIVEPLRRNMDR 522
L L RLR ARG+ +W RAKKAGVTDEVV+E+RR W S ELA V+IVEPLRR+MDR
Sbjct: 170 LETHELHRLRRLARGIGRWARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDR 229
Query: 523 AHEIIETKTGRLVVWRKKDVLVVYRGGNCQ 612
A EI+E KTG LVVW K D+ VYRG Q
Sbjct: 230 AREILEIKTGGLVVWTKGDMHFVYRGSKYQ 259
>ref|XP_002444215.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
gi|241940565|gb|EES13710.1| hypothetical protein
SORBIDRAFT_07g015120 [Sorghum bicolor]
Length = 728
Score = 142 bits (357), Expect = 1e-31
Identities = 98/209 (46%), Positives = 114/209 (54%), Gaps = 11/209 (5%)
Frame = +1
Query: 19 KPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEISVDF 198
K T+T A P LTA V GGR +A+ II + L S + S
Sbjct: 60 KNTKTTAKP----------LTAGVPGGRTHRAVLGIIRRVRSLELSDAPSASSVHDSNAG 109
Query: 199 AARLQEAMVAAGD--EEGQKV------KGTPWATA--EGRKLVFPREKKERVVTAAEWAL 348
AA + E GQ+V + PWA A EG K+ REKK R T AE L
Sbjct: 110 AAAAFHLPIEPSPPREPGQEVVEKAKPRAVPWAAARDEGLKVALRREKKPRKPTRAETEL 169
Query: 349 PGPLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTWRS-SELAMVKIVEPLRRNMDRA 525
L RLR ARGM +W RAKKAGVTDEVVEE+RR W S ELA V+IVEPLRR+MDRA
Sbjct: 170 ETDELDRLRRLARGMGRWARAKKAGVTDEVVEEMRREWASGEELAAVRIVEPLRRSMDRA 229
Query: 526 HEIIETKTGRLVVWRKKDVLVVYRGGNCQ 612
EI+E KTG LVVW K D+ VY+G Q
Sbjct: 230 REILEIKTGGLVVWTKGDIHFVYKGSKYQ 258
>ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X5 [Glycine max]
Length = 744
Score = 140 bits (354), Expect = 2e-31
Identities = 91/206 (44%), Positives = 123/206 (59%), Gaps = 6/206 (2%)
Frame = +1
Query: 13 LSKPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEISV 192
LS P + P+ + L+D +L K RG++AM+ I++ + KL ++ + E V
Sbjct: 66 LSNPKSKKFKPEKHE-LSDKALMGKEV--RGKRAMKKIVDRVEKLHKTQ----NSNETRV 118
Query: 193 D------FAARLQEAMVAAGDEEGQKVKGTPWATAEGRKLVFPREKKERVVTAAEWALPG 354
D F L+ + +EE + PW E K F + K+E+ VTAAE L
Sbjct: 119 DSLNVENFGGYLE---ILKENEEVRSKGRMPWEKDE--KFGFVKVKREKAVTAAELTLDK 173
Query: 355 PLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTWRSSELAMVKIVEPLRRNMDRAHEI 534
LL RLR+EA M+ W++ KKAGVT +VV++I+RTWR +ELAM+K PL RNMDRA EI
Sbjct: 174 ALLRRLRNEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREI 233
Query: 535 IETKTGRLVVWRKKDVLVVYRGGNCQ 612
+ETKTG LVV KKD LVVYRG N Q
Sbjct: 234 VETKTGGLVVLSKKDFLVVYRGCNHQ 259
>ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X2 [Glycine max]
gi|571550194|ref|XP_006603056.1| PREDICTED:
chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X3 [Glycine max]
gi|571550197|ref|XP_006603057.1| PREDICTED:
chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X4 [Glycine max]
Length = 747
Score = 140 bits (354), Expect = 2e-31
Identities = 91/206 (44%), Positives = 123/206 (59%), Gaps = 6/206 (2%)
Frame = +1
Query: 13 LSKPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEISV 192
LS P + P+ + L+D +L K RG++AM+ I++ + KL ++ + E V
Sbjct: 66 LSNPKSKKFKPEKHE-LSDKALMGKEV--RGKRAMKKIVDRVEKLHKTQ----NSNETRV 118
Query: 193 D------FAARLQEAMVAAGDEEGQKVKGTPWATAEGRKLVFPREKKERVVTAAEWALPG 354
D F L+ + +EE + PW E K F + K+E+ VTAAE L
Sbjct: 119 DSLNVENFGGYLE---ILKENEEVRSKGRMPWEKDE--KFGFVKVKREKAVTAAELTLDK 173
Query: 355 PLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTWRSSELAMVKIVEPLRRNMDRAHEI 534
LL RLR+EA M+ W++ KKAGVT +VV++I+RTWR +ELAM+K PL RNMDRA EI
Sbjct: 174 ALLRRLRNEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREI 233
Query: 535 IETKTGRLVVWRKKDVLVVYRGGNCQ 612
+ETKTG LVV KKD LVVYRG N Q
Sbjct: 234 VETKTGGLVVLSKKDFLVVYRGCNHQ 259
>ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X1 [Glycine max]
Length = 750
Score = 140 bits (354), Expect = 2e-31
Identities = 91/206 (44%), Positives = 123/206 (59%), Gaps = 6/206 (2%)
Frame = +1
Query: 13 LSKPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEISV 192
LS P + P+ + L+D +L K RG++AM+ I++ + KL ++ + E V
Sbjct: 66 LSNPKSKKFKPEKHE-LSDKALMGKEV--RGKRAMKKIVDRVEKLHKTQ----NSNETRV 118
Query: 193 D------FAARLQEAMVAAGDEEGQKVKGTPWATAEGRKLVFPREKKERVVTAAEWALPG 354
D F L+ + +EE + PW E K F + K+E+ VTAAE L
Sbjct: 119 DSLNVENFGGYLE---ILKENEEVRSKGRMPWEKDE--KFGFVKVKREKAVTAAELTLDK 173
Query: 355 PLLARLRSEARGMKKWVRAKKAGVTDEVVEEIRRTWRSSELAMVKIVEPLRRNMDRAHEI 534
LL RLR+EA M+ W++ KKAGVT +VV++I+RTWR +ELAM+K PL RNMDRA EI
Sbjct: 174 ALLRRLRNEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREI 233
Query: 535 IETKTGRLVVWRKKDVLVVYRGGNCQ 612
+ETKTG LVV KKD LVVYRG N Q
Sbjct: 234 VETKTGGLVVLSKKDFLVVYRGCNHQ 259
>ref|XP_002306656.2| hypothetical protein POPTR_0005s15420g [Populus trichocarpa]
gi|550339039|gb|EEE93652.2| hypothetical protein
POPTR_0005s15420g [Populus trichocarpa]
Length = 729
Score = 140 bits (352), Expect = 4e-31
Identities = 90/200 (45%), Positives = 116/200 (58%)
Frame = +1
Query: 13 LSKPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEISV 192
L+ P + +D D +LTAK SG RG KAM I+ + +L+R +T EIS
Sbjct: 90 LTNPKNKKPIKNDKIEKDDKALTAKESGVRGNKAMIQIVKSVERLQRDENLK-DTQEISE 148
Query: 193 DFAARLQEAMVAAGDEEGQKVKGTPWATAEGRKLVFPREKKERVVTAAEWALPGPLLARL 372
+ +E K PW E ++ R KKE+VV+ AE +L LL RL
Sbjct: 149 NGVLGFRE-------------KKLPWVREE--RVGNWRMKKEKVVSKAELSLDKELLERL 193
Query: 373 RSEARGMKKWVRAKKAGVTDEVVEEIRRTWRSSELAMVKIVEPLRRNMDRAHEIIETKTG 552
R EA M+ WV+ KKAGVT VV+EIR TWR+SELAM+K PL RNM+RA +I+E TG
Sbjct: 194 RGEAAKMRTWVKVKKAGVTQSVVDEIRLTWRTSELAMIKFYMPLCRNMNRARDIVE--TG 251
Query: 553 RLVVWRKKDVLVVYRGGNCQ 612
LVVW +KD+ VVYRG N Q
Sbjct: 252 GLVVWTRKDIHVVYRGCNYQ 271
>ref|XP_002329296.1| predicted protein [Populus trichocarpa]
Length = 687
Score = 140 bits (352), Expect = 4e-31
Identities = 90/200 (45%), Positives = 116/200 (58%)
Frame = +1
Query: 13 LSKPTRTEANPDDADRLADLSLTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPETTEISV 192
L+ P + +D D +LTAK SG RG KAM I+ + +L+R +T EIS
Sbjct: 48 LTNPKNKKPIKNDKIEKDDKALTAKESGVRGNKAMIQIVKSVERLQRDENLK-DTQEISE 106
Query: 193 DFAARLQEAMVAAGDEEGQKVKGTPWATAEGRKLVFPREKKERVVTAAEWALPGPLLARL 372
+ +E K PW E ++ R KKE+VV+ AE +L LL RL
Sbjct: 107 NGVLGFRE-------------KKLPWVREE--RVGNWRMKKEKVVSKAELSLDKELLERL 151
Query: 373 RSEARGMKKWVRAKKAGVTDEVVEEIRRTWRSSELAMVKIVEPLRRNMDRAHEIIETKTG 552
R EA M+ WV+ KKAGVT VV+EIR TWR+SELAM+K PL RNM+RA +I+E TG
Sbjct: 152 RGEAAKMRTWVKVKKAGVTQSVVDEIRLTWRTSELAMIKFYMPLCRNMNRARDIVE--TG 209
Query: 553 RLVVWRKKDVLVVYRGGNCQ 612
LVVW +KD+ VVYRG N Q
Sbjct: 210 GLVVWTRKDIHVVYRGCNYQ 229
>ref|NP_001061635.1| Os08g0360100 [Oryza sativa Japonica Group]
gi|75132343|sp|Q6YYA3.1|CRS1_ORYSJ RecName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor gi|38637564|dbj|BAD03815.1|
putative CRS1 [Oryza sativa Japonica Group]
gi|113623604|dbj|BAF23549.1| Os08g0360100 [Oryza sativa
Japonica Group]
Length = 725
Score = 138 bits (348), Expect = 1e-30
Identities = 90/193 (46%), Positives = 108/193 (55%), Gaps = 16/193 (8%)
Frame = +1
Query: 76 LTAKVSGGRGRKAMRDIINGLTKLRRSPPFDPE-----------TTEISVDFAARLQEAM 222
LTA V GGR R+A+ II + L S P P T V F +
Sbjct: 50 LTAGVPGGRTRRAVLGIIRKVRSLELSDPRTPSPNGGGGSSSSSTATARVPFHLPIHPPP 109
Query: 223 VAAGDEEGQKV--KGTPWATA--EGRKLVFPREKKERVVTAAEWALPGPLLARLRSEARG 390
+EE +K + PWA A E K+V REKK RV T AE L L RLR ARG
Sbjct: 110 PEREEEEEKKGIRRAVPWAAARDEETKVVLRREKKTRVPTRAETELEAGELERLRRAARG 169
Query: 391 MKKWVRAKKAGVTDEVVEEIRRTW-RSSELAMVKIVEPLRRNMDRAHEIIETKTGRLVVW 567
++W RAKKAG+TDEVVEE+R W + ELA V+IVEPLRR MDRA EI+E KTG LVVW
Sbjct: 170 KERWARAKKAGITDEVVEEVRGQWAKGQELAGVRIVEPLRRCMDRAREILEIKTGGLVVW 229
Query: 568 RKKDVLVVYRGGN 606
+ + VYRG +
Sbjct: 230 TRGGIHFVYRGSS 242