BLASTX nr result
ID: Stemona21_contig00024533
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00024533
(317 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004974856.1| PREDICTED: RNA pseudouridine synthase 3, mit... 106 3e-21
dbj|BAD09699.1| hypothetical protein [Oryza sativa Japonica Grou... 106 3e-21
gb|EAZ43360.1| hypothetical protein OsJ_27960 [Oryza sativa Japo... 106 3e-21
ref|NP_001062265.1| Os08g0520100 [Oryza sativa Japonica Group] g... 106 3e-21
gb|AFW61502.1| hypothetical protein ZEAMMB73_778378 [Zea mays] 104 1e-20
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ... 103 2e-20
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 103 3e-20
emb|CBI18448.3| unnamed protein product [Vitis vinifera] 103 3e-20
gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis] 102 5e-20
ref|XP_003572398.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 102 7e-20
gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis] 101 9e-20
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [... 101 1e-19
ref|XP_002444745.1| hypothetical protein SORBIDRAFT_07g027030 [S... 99 6e-19
ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr... 98 1e-18
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24... 97 2e-18
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian... 97 2e-18
ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arab... 97 3e-18
gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus pe... 95 8e-18
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit... 95 1e-17
ref|XP_004515177.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 95 1e-17
>ref|XP_004974856.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like,
partial [Setaria italica]
Length = 464
Score = 106 bits (265), Expect = 3e-21
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = +1
Query: 70 APAESVI-RV-SNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRKKDPSRAGRVTAI 243
APA+ V+ RV S+N+ARLG PK GP+PRQLLSLPPFP + DPLPGRK P R VTA+
Sbjct: 16 APADPVVVRVDSSNVARLGAPKPGPRPRQLLSLPPFP-AGADPLPGRKVVPRR---VTAV 71
Query: 244 SWVKHYFADIPSEVIQRHFNKGLV 315
SWVKHYFAD+P E +Q HFN+ +V
Sbjct: 72 SWVKHYFADVPQEAVQAHFNRRMV 95
>dbj|BAD09699.1| hypothetical protein [Oryza sativa Japonica Group]
gi|42409168|dbj|BAD10434.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 192
Score = 106 bits (265), Expect = 3e-21
Identities = 57/87 (65%), Positives = 65/87 (74%), Gaps = 5/87 (5%)
Frame = +1
Query: 70 APAES---VIRVS-NNIARLGDPKEGPKPRQLLSLPPFPDSNT-DPLPGRKKDPSRAGRV 234
APAE+ V+RV +N+ARLG PK GP+PRQLLSLPPFP DPLPGRK R RV
Sbjct: 83 APAEADPVVVRVDGSNVARLGKPKPGPRPRQLLSLPPFPGGGDGDPLPGRKAAAPR--RV 140
Query: 235 TAISWVKHYFADIPSEVIQRHFNKGLV 315
TA+SWVKHY AD+P EV+Q HFNK LV
Sbjct: 141 TAVSWVKHYLADVPQEVVQAHFNKRLV 167
>gb|EAZ43360.1| hypothetical protein OsJ_27960 [Oryza sativa Japonica Group]
Length = 509
Score = 106 bits (265), Expect = 3e-21
Identities = 57/87 (65%), Positives = 65/87 (74%), Gaps = 5/87 (5%)
Frame = +1
Query: 70 APAES---VIRVS-NNIARLGDPKEGPKPRQLLSLPPFPDSNT-DPLPGRKKDPSRAGRV 234
APAE+ V+RV +N+ARLG PK GP+PRQLLSLPPFP DPLPGRK R RV
Sbjct: 56 APAEADPVVVRVDGSNVARLGKPKPGPRPRQLLSLPPFPGGGDGDPLPGRKAAAPR--RV 113
Query: 235 TAISWVKHYFADIPSEVIQRHFNKGLV 315
TA+SWVKHY AD+P EV+Q HFNK LV
Sbjct: 114 TAVSWVKHYLADVPQEVVQAHFNKRLV 140
>ref|NP_001062265.1| Os08g0520100 [Oryza sativa Japonica Group]
gi|122234516|sp|Q0J4D4.1|PUS3_ORYSJ RecName: Full=RNA
pseudouridine synthase 3, mitochondrial; AltName:
Full=RNA pseudouridylate synthase 3; AltName:
Full=RNA-uridine isomerase 3; Flags: Precursor
gi|113624234|dbj|BAF24179.1| Os08g0520100 [Oryza sativa
Japonica Group] gi|125562210|gb|EAZ07658.1| hypothetical
protein OsI_29911 [Oryza sativa Indica Group]
Length = 475
Score = 106 bits (265), Expect = 3e-21
Identities = 57/87 (65%), Positives = 65/87 (74%), Gaps = 5/87 (5%)
Frame = +1
Query: 70 APAES---VIRVS-NNIARLGDPKEGPKPRQLLSLPPFPDSNT-DPLPGRKKDPSRAGRV 234
APAE+ V+RV +N+ARLG PK GP+PRQLLSLPPFP DPLPGRK R RV
Sbjct: 22 APAEADPVVVRVDGSNVARLGKPKPGPRPRQLLSLPPFPGGGDGDPLPGRKAAAPR--RV 79
Query: 235 TAISWVKHYFADIPSEVIQRHFNKGLV 315
TA+SWVKHY AD+P EV+Q HFNK LV
Sbjct: 80 TAVSWVKHYLADVPQEVVQAHFNKRLV 106
>gb|AFW61502.1| hypothetical protein ZEAMMB73_778378 [Zea mays]
Length = 478
Score = 104 bits (259), Expect = 1e-20
Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = +1
Query: 70 APAESVI-RV-SNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRKKDPSRAGRVTAI 243
APA+ V+ RV +NN+ARLG PK P+PRQLLSLPPFP + DPLPGRK P R VTA+
Sbjct: 30 APADPVVVRVDANNVARLGAPKPRPRPRQLLSLPPFP-AGQDPLPGRKVAPRR---VTAV 85
Query: 244 SWVKHYFADIPSEVIQRHFNKGLV 315
SWVKHYFAD+P E +Q HFN+ +V
Sbjct: 86 SWVKHYFADVPQEAVQAHFNRRMV 109
>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
Length = 471
Score = 103 bits (258), Expect = 2e-20
Identities = 53/82 (64%), Positives = 62/82 (75%)
Frame = +1
Query: 70 APAESVIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRKKDPSRAGRVTAISW 249
A A+ V+RVSN++A LG PK+GPKPRQLLSLPPFP PLPG K+P RVTAISW
Sbjct: 26 AYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFPGY---PLPG--KNPGGTARVTAISW 80
Query: 250 VKHYFADIPSEVIQRHFNKGLV 315
+K+YF +IP IQ HFNKGLV
Sbjct: 81 LKYYFDEIPDSAIQSHFNKGLV 102
>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
vinifera]
Length = 479
Score = 103 bits (256), Expect = 3e-20
Identities = 53/84 (63%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = +1
Query: 70 APAESVIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRK--KDPSRAGRVTAI 243
A A VIRVSNN+A+LG PKEGPKPRQLLSLPPFP PLPG+ VTAI
Sbjct: 28 ASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFP---AHPLPGKSLVNVSGLPTHVTAI 84
Query: 244 SWVKHYFADIPSEVIQRHFNKGLV 315
SW+K+YF +IP V+Q HFNKGLV
Sbjct: 85 SWIKYYFDEIPGSVVQSHFNKGLV 108
>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 103 bits (256), Expect = 3e-20
Identities = 53/84 (63%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = +1
Query: 70 APAESVIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRK--KDPSRAGRVTAI 243
A A VIRVSNN+A+LG PKEGPKPRQLLSLPPFP PLPG+ VTAI
Sbjct: 28 ASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFP---AHPLPGKSLVNVSGLPTHVTAI 84
Query: 244 SWVKHYFADIPSEVIQRHFNKGLV 315
SW+K+YF +IP V+Q HFNKGLV
Sbjct: 85 SWIKYYFDEIPGSVVQSHFNKGLV 108
>gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]
Length = 449
Score = 102 bits (254), Expect = 5e-20
Identities = 53/82 (64%), Positives = 61/82 (74%)
Frame = +1
Query: 70 APAESVIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRKKDPSRAGRVTAISW 249
A A VIRVSNN+A+LG PKEGPKPRQLLSLPPFP PLPG+K + RVTAI+W
Sbjct: 18 AEAGPVIRVSNNVAQLGGPKEGPKPRQLLSLPPFPGL---PLPGKKSE-----RVTAITW 69
Query: 250 VKHYFADIPSEVIQRHFNKGLV 315
VK+YF ++ VIQ HFNK LV
Sbjct: 70 VKYYFEEVHDNVIQSHFNKSLV 91
>ref|XP_003572398.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like
[Brachypodium distachyon]
Length = 479
Score = 102 bits (253), Expect = 7e-20
Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 3/82 (3%)
Frame = +1
Query: 70 APAESVIRVSN--NIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRKKDPSRAG-RVTA 240
A A V+RV + N+ARLG PK GP+PRQLLSLPPFP + DPLPGRK + A RV+A
Sbjct: 27 AAAAPVVRVESGSNVARLGAPKPGPRPRQLLSLPPFP-AGADPLPGRKTAAAEASRRVSA 85
Query: 241 ISWVKHYFADIPSEVIQRHFNK 306
+SWVKH FAD+P EV+Q HFNK
Sbjct: 86 VSWVKHCFADVPQEVVQAHFNK 107
>gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]
Length = 449
Score = 101 bits (252), Expect = 9e-20
Identities = 53/82 (64%), Positives = 60/82 (73%)
Frame = +1
Query: 70 APAESVIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRKKDPSRAGRVTAISW 249
A A VIRVSNN+A+LG PKEGPKPRQLLSLPPFP PLPG+ + RVTAISW
Sbjct: 18 AEAGPVIRVSNNVAQLGGPKEGPKPRQLLSLPPFPGL---PLPGKNSE-----RVTAISW 69
Query: 250 VKHYFADIPSEVIQRHFNKGLV 315
VK+YF ++ VIQ HFNK LV
Sbjct: 70 VKYYFEEVHDNVIQSHFNKSLV 91
>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 468
Score = 101 bits (251), Expect = 1e-19
Identities = 54/81 (66%), Positives = 58/81 (71%)
Frame = +1
Query: 70 APAESVIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRKKDPSRAGRVTAISW 249
A A VIRVSNN+A LG PK+GPKPRQLLSLPPFP PLPGR S A VTAISW
Sbjct: 26 AYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPPFPGL---PLPGRN---SMASHVTAISW 79
Query: 250 VKHYFADIPSEVIQRHFNKGL 312
VK+YF +I IQ HFNKGL
Sbjct: 80 VKYYFDEILDSAIQSHFNKGL 100
>ref|XP_002444745.1| hypothetical protein SORBIDRAFT_07g027030 [Sorghum bicolor]
gi|241941095|gb|EES14240.1| hypothetical protein
SORBIDRAFT_07g027030 [Sorghum bicolor]
Length = 439
Score = 99.0 bits (245), Expect = 6e-19
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Frame = +1
Query: 70 APAES---VIRV-SNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRKKDPSRAGRVT 237
APA + V+RV ++N+ARLG PK GP+PRQLLSLP FP + DPLPGRK P R VT
Sbjct: 28 APAAADPVVVRVDASNVARLGPPKPGPRPRQLLSLPAFP-AGLDPLPGRKAAPRR---VT 83
Query: 238 AISWVKHYFADIPSEVIQRHFNKGLV 315
+SWVKHYFAD+P E +Q HFN+ V
Sbjct: 84 VVSWVKHYFADVPHEAVQAHFNRRTV 109
>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
gi|557086377|gb|ESQ27229.1| hypothetical protein
EUTSA_v10018480mg [Eutrema salsugineum]
Length = 478
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/81 (59%), Positives = 57/81 (70%)
Frame = +1
Query: 73 PAESVIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRKKDPSRAGRVTAISWV 252
P +VIRV+NNIA+LG PK+GP PRQL+SLPPFP PLPG+ G VTAISWV
Sbjct: 31 PPSTVIRVTNNIAQLGPPKKGPLPRQLMSLPPFPG---HPLPGKNAGVDEDGHVTAISWV 87
Query: 253 KHYFADIPSEVIQRHFNKGLV 315
K+Y +I + IQ HF KGLV
Sbjct: 88 KYYLEEIHDKAIQSHFTKGLV 108
>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
surA-hepA intergenic region yab0 from Escherichia coli
genome gb|AE000116, and to hypothetical YABO family
PF|00849 [Arabidopsis thaliana]
Length = 491
Score = 97.4 bits (241), Expect = 2e-18
Identities = 50/86 (58%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Frame = +1
Query: 73 PAESVIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRK-----KDPSRAGRVT 237
P SVIRV+NN+A LG PK+GP PRQL+SLPPFP PLPG+ D G VT
Sbjct: 26 PPSSVIRVTNNVAHLGPPKQGPLPRQLISLPPFPG---HPLPGKNAGADGDDGDSGGHVT 82
Query: 238 AISWVKHYFADIPSEVIQRHFNKGLV 315
AISWVK+YF +I + IQ HF KGLV
Sbjct: 83 AISWVKYYFEEIYDKAIQTHFTKGLV 108
>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
pseudouridine synthase 3, mitochondrial; AltName:
Full=RNA pseudouridylate synthase 3; AltName:
Full=RNA-uridine isomerase 3; Flags: Precursor
gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
thaliana] gi|56790228|gb|AAW30031.1| At1g78910
[Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
pseudourine synthase 3 [Arabidopsis thaliana]
Length = 478
Score = 97.4 bits (241), Expect = 2e-18
Identities = 50/86 (58%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Frame = +1
Query: 73 PAESVIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRK-----KDPSRAGRVT 237
P SVIRV+NN+A LG PK+GP PRQL+SLPPFP PLPG+ D G VT
Sbjct: 26 PPSSVIRVTNNVAHLGPPKQGPLPRQLISLPPFPG---HPLPGKNAGADGDDGDSGGHVT 82
Query: 238 AISWVKHYFADIPSEVIQRHFNKGLV 315
AISWVK+YF +I + IQ HF KGLV
Sbjct: 83 AISWVKYYFEEIYDKAIQTHFTKGLV 108
>ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arabidopsis lyrata subsp.
lyrata] gi|297333602|gb|EFH64020.1| hypothetical protein
ARALYDRAFT_477057 [Arabidopsis lyrata subsp. lyrata]
Length = 477
Score = 96.7 bits (239), Expect = 3e-18
Identities = 50/85 (58%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Frame = +1
Query: 73 PAESVIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRKK----DPSRAGRVTA 240
P SV+RV+NNIA LG PK+GP PRQL+SLPPFP PLPG+ D +G VTA
Sbjct: 26 PPSSVLRVTNNIAHLGPPKQGPLPRQLISLPPFPGY---PLPGKNAGVDGDEGDSGHVTA 82
Query: 241 ISWVKHYFADIPSEVIQRHFNKGLV 315
ISWVK YF +I + IQ HF KGLV
Sbjct: 83 ISWVKFYFEEIHDKAIQTHFTKGLV 107
>gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
Length = 471
Score = 95.1 bits (235), Expect = 8e-18
Identities = 52/85 (61%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
Frame = +1
Query: 73 PAES---VIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPG-RKKDPSRAGRVTA 240
PA+S +IRVSN++ARLG PKEGPKPRQLLSLPPFP PLPG R + RVTA
Sbjct: 25 PAKSAGPLIRVSNHVARLGPPKEGPKPRQLLSLPPFPG---HPLPGKRSHEGGVVSRVTA 81
Query: 241 ISWVKHYFADIPSEVIQRHFNKGLV 315
+SWVK+YF I IQ HF +GLV
Sbjct: 82 VSWVKYYFDGIYDSTIQSHFKQGLV 106
>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
PREDICTED: RNA pseudouridine synthase 3,
mitochondrial-like isoform X2 [Solanum tuberosum]
gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
pseudouridine synthase 3, mitochondrial-like isoform X3
[Solanum tuberosum]
Length = 475
Score = 94.7 bits (234), Expect = 1e-17
Identities = 52/82 (63%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Frame = +1
Query: 79 ESVIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRK--KDPSRAG-RVTAISW 249
E VIRVSNNI LG KEG KP QLLSLPPFP PLPG+K P + VTAISW
Sbjct: 32 EPVIRVSNNITHLGRQKEGAKPSQLLSLPPFPG---HPLPGKKVATGPDQPSCHVTAISW 88
Query: 250 VKHYFADIPSEVIQRHFNKGLV 315
+K+YF +IP VIQ HFNKGLV
Sbjct: 89 IKYYFDEIPGSVIQTHFNKGLV 110
>ref|XP_004515177.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
X2 [Cicer arietinum]
Length = 360
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/81 (59%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +1
Query: 79 ESVIRVSNNIARLGDPKEGPKPRQLLSLPPFPDSNTDPLPGRKKD--PSRAGRVTAISWV 252
E VIRVSNNIARL PKEGPKPRQLLSLPPFP PLPG+ P + VTA++W+
Sbjct: 33 EKVIRVSNNIARLDVPKEGPKPRQLLSLPPFP---CHPLPGKNSTSAPGKRDHVTAVNWI 89
Query: 253 KHYFADIPSEVIQRHFNKGLV 315
K+YF VI+ HF +GLV
Sbjct: 90 KYYFKGTSGSVIESHFREGLV 110