BLASTX nr result
ID: Stemona21_contig00024512
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00024512
(302 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI21323.3| unnamed protein product [Vitis vinifera] 80 3e-13
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
ref|XP_006470101.1| PREDICTED: pentatricopeptide repeat-containi... 76 5e-12
ref|XP_006447022.1| hypothetical protein CICLE_v10014547mg [Citr... 76 5e-12
ref|XP_004306308.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi... 73 3e-11
gb|EXC33394.1| hypothetical protein L484_010804 [Morus notabilis] 72 6e-11
gb|EOY02851.1| Tetratricopeptide repeat-like superfamily protein... 72 1e-10
ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|5... 71 1e-10
ref|XP_002298642.1| pentatricopeptide repeat-containing family p... 71 1e-10
gb|EMJ16126.1| hypothetical protein PRUPE_ppa002717mg [Prunus pe... 70 2e-10
ref|XP_006338715.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_004233584.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
gb|ESW33676.1| hypothetical protein PHAVU_001G089400g [Phaseolus... 68 1e-09
gb|ESW33675.1| hypothetical protein PHAVU_001G089400g [Phaseolus... 68 1e-09
gb|ESW33674.1| hypothetical protein PHAVU_001G089400g [Phaseolus... 68 1e-09
ref|XP_004498363.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_002512901.1| pentatricopeptide repeat-containing protein,... 67 2e-09
dbj|BAB08287.1| unnamed protein product [Arabidopsis thaliana] 64 2e-08
ref|NP_196912.2| pentatricopeptide repeat-containing protein [Ar... 64 2e-08
>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 80.1 bits (196), Expect = 3e-13
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Frame = +2
Query: 35 SVCAAARRLGHALVAAS---KPSRAWSPALEQTIRHLLGAP--LTPPLVAAVIDXXXXXX 199
S AA R+ AL+AAS +P+R+WSP+LEQT+ H LG L+P LVA VID
Sbjct: 4 SAIEAAIRISRALIAASNQSRPTRSWSPSLEQTL-HRLGCHELLSPSLVARVIDPFLLHH 62
Query: 200 XXXXXGLFHWASQQPGFAHTPLTYHALLKS 289
G F+WASQ+PGFAHT ++Y ++LKS
Sbjct: 63 HSLALGFFYWASQKPGFAHTSISYQSVLKS 92
>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
[Vitis vinifera]
Length = 660
Score = 80.1 bits (196), Expect = 3e-13
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Frame = +2
Query: 35 SVCAAARRLGHALVAAS---KPSRAWSPALEQTIRHLLGAP--LTPPLVAAVIDXXXXXX 199
S AA R+ AL+AAS +P+R+WSP+LEQT+ H LG L+P LVA VID
Sbjct: 4 SAIEAAIRISRALIAASNQSRPTRSWSPSLEQTL-HRLGCHELLSPSLVARVIDPFLLHH 62
Query: 200 XXXXXGLFHWASQQPGFAHTPLTYHALLKS 289
G F+WASQ+PGFAHT ++Y ++LKS
Sbjct: 63 HSLALGFFYWASQKPGFAHTSISYQSVLKS 92
>ref|XP_006470101.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g14080-like isoform X2 [Citrus sinensis]
Length = 556
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Frame = +2
Query: 50 ARRLGHALVAAS---KPSRAWSPALEQTIRHL-LGAPLTPPLVAAVIDXXXXXXXXXXXG 217
A R+ A+++AS +P+R W+P LEQT+ L L L+P LVA VI+ G
Sbjct: 10 ATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALG 69
Query: 218 LFHWASQQPGFAHTPLTYHALLKS 289
F+WASQQP F H+PL+YH++LKS
Sbjct: 70 FFNWASQQPNFTHSPLSYHSILKS 93
>ref|XP_006447022.1| hypothetical protein CICLE_v10014547mg [Citrus clementina]
gi|568831706|ref|XP_006470100.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g14080-like isoform X1 [Citrus sinensis]
gi|557549633|gb|ESR60262.1| hypothetical protein
CICLE_v10014547mg [Citrus clementina]
Length = 652
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Frame = +2
Query: 50 ARRLGHALVAAS---KPSRAWSPALEQTIRHL-LGAPLTPPLVAAVIDXXXXXXXXXXXG 217
A R+ A+++AS +P+R W+P LEQT+ L L L+P LVA VI+ G
Sbjct: 10 ATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALG 69
Query: 218 LFHWASQQPGFAHTPLTYHALLKS 289
F+WASQQP F H+PL+YH++LKS
Sbjct: 70 FFNWASQQPNFTHSPLSYHSILKS 93
>ref|XP_004306308.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g14080-like [Fragaria vesca subsp. vesca]
Length = 630
Score = 75.5 bits (184), Expect = 7e-12
Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Frame = +2
Query: 35 SVCAAARRLGHALVAAS---KPSRAWSPALEQTIRHLLGA--PLTPPLVAAVIDXXXXXX 199
S A R+ AL++AS KP+R+WSP+LE + H LG L+P LVA VID
Sbjct: 5 SATELASRISRALISASNNTKPTRSWSPSLENLL-HRLGCRDSLSPQLVAGVIDPFLLNH 63
Query: 200 XXXXXGLFHWASQQPGFAHTPLTYHALLKS 289
G F+WASQQP F+HT LTY ++LKS
Sbjct: 64 HSLALGFFNWASQQPSFSHTSLTYQSVLKS 93
>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g14080-like [Glycine max]
Length = 647
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +2
Query: 44 AAARRLGHALVAASKPSRAWSPALEQTIRHLLG--APLTPPLVAAVIDXXXXXXXXXXXG 217
+ AR L A+++ASK W P +E+ + H LG L+P LV VID G
Sbjct: 6 SGARGLSKAVISASKKRGRWGPEVEERL-HRLGWRQRLSPSLVGNVIDPFLKSHHSLALG 64
Query: 218 LFHWASQQPGFAHTPLTYHALLKS 289
F+WASQQPGF+HTP T+H+LLKS
Sbjct: 65 FFNWASQQPGFSHTPFTFHSLLKS 88
>gb|EXC33394.1| hypothetical protein L484_010804 [Morus notabilis]
Length = 619
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Frame = +2
Query: 35 SVCAAARRLGHALVAAS---KPSRAWSPALEQTIRHL-LGAPLTPPLVAAVIDXXXXXXX 202
S A R+ AL+ AS +P+R+W+P+LE T+ L LTP LVA VID
Sbjct: 6 SATELATRISRALINASNHSRPTRSWTPSLELTLHRLAFRDSLTPSLVARVIDSFLLPHH 65
Query: 203 XXXXGLFHWASQQPGFAHTPLTYHALLKS 289
G F+WASQQPGF+H+ ++Y ++LKS
Sbjct: 66 SLALGFFNWASQQPGFSHSSISYQSILKS 94
>gb|EOY02851.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 655
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Frame = +2
Query: 50 ARRLGHALVAASK---PSRAWSPALEQTIRHLLGA--PLTPPLVAAVIDXXXXXXXXXXX 214
A R+G AL++AS P+R W+ +LEQT+ H LG L+P LVA VID
Sbjct: 8 ANRIGRALISASNHAIPTRTWTASLEQTL-HRLGCRDSLSPSLVARVIDSFLSTHHCLAL 66
Query: 215 GLFHWASQQPGFAHTPLTYHALLKS 289
G F+WASQQPG+ H ++Y ++LKS
Sbjct: 67 GFFNWASQQPGYCHDSISYQSILKS 91
>ref|XP_002336062.1| predicted protein [Populus trichocarpa]
gi|566152518|ref|XP_006369836.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|550348773|gb|ERP66405.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 626
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = +2
Query: 50 ARRLGHALVAASK---PSRAWSPALEQTIRHLLGA--PLTPPLVAAVIDXXXXXXXXXXX 214
A R+ AL+ S P+R+W+P LEQT+ H +G L+ LVA VID
Sbjct: 9 AVRISRALITESNSSIPTRSWNPLLEQTL-HKIGCRDSLSQSLVARVIDPHLLTHHSLAL 67
Query: 215 GLFHWASQQPGFAHTPLTYHALLKS 289
G F+WASQQPGF H LTYH++LKS
Sbjct: 68 GFFNWASQQPGFTHNSLTYHSVLKS 92
>ref|XP_002298642.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222845900|gb|EEE83447.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 567
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = +2
Query: 50 ARRLGHALVAASK---PSRAWSPALEQTIRHLLGA--PLTPPLVAAVIDXXXXXXXXXXX 214
A R+ AL+ S P+R+W+P LEQT+ H +G L+ LVA VID
Sbjct: 9 AVRISRALITESNSSIPTRSWNPLLEQTL-HKIGCRDSLSQSLVARVIDPHLLTHHSLAL 67
Query: 215 GLFHWASQQPGFAHTPLTYHALLKS 289
G F+WASQQPGF H LTYH++LKS
Sbjct: 68 GFFNWASQQPGFTHNSLTYHSVLKS 92
>gb|EMJ16126.1| hypothetical protein PRUPE_ppa002717mg [Prunus persica]
Length = 640
Score = 70.5 bits (171), Expect = 2e-10
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Frame = +2
Query: 35 SVCAAARRLGHALVAAS---KPSRAWSPALEQTIRHLLGA--PLTPPLVAAVIDXXXXXX 199
S A R+ L++AS +P+R+W+P+LE I H LG L+P LVA VID
Sbjct: 5 SATELASRISRVLISASNHTRPTRSWNPSLEN-ILHQLGCRDSLSPSLVARVIDPFLLPH 63
Query: 200 XXXXXGLFHWASQQPGFAHTPLTYHALLKS 289
G F+WASQQP F+HT +TY ++LKS
Sbjct: 64 HSLALGFFNWASQQPSFSHTSITYKSVLKS 93
>ref|XP_006338715.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g14080-like [Solanum tuberosum]
Length = 650
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = +2
Query: 32 QSVCAAARRLGHALVAASKP-SRAWSPALEQTIRHL-LGAPLTPPLVAAVIDXXXXXXXX 205
+SV A + AL+ ASK S+ W+PALEQT+ L L+P LVA VID
Sbjct: 4 RSVGEFASVISRALIHASKQRSQTWTPALEQTLYRLGCRESLSPTLVARVIDPFLVHHHS 63
Query: 206 XXXGLFHWASQQPGFAHTPLTYHALLKS 289
G F+WASQQPGF+H TYH++L S
Sbjct: 64 LALGFFNWASQQPGFSHDSSTYHSILNS 91
>ref|XP_004233584.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g14080-like [Solanum lycopersicum]
Length = 647
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = +2
Query: 32 QSVCAAARRLGHALVAASKPSR-AWSPALEQTIRHL-LGAPLTPPLVAAVIDXXXXXXXX 205
+SV A + AL+ ASK R W+PALEQT+ L L+P LVA VID
Sbjct: 3 RSVGEFASVISRALIHASKKRRQTWTPALEQTLYRLGCRESLSPTLVARVIDPFLVHHHS 62
Query: 206 XXXGLFHWASQQPGFAHTPLTYHALLKS 289
G F+WASQQPGF+H TYH++L S
Sbjct: 63 LALGFFNWASQQPGFSHDSSTYHSILNS 90
>gb|ESW33676.1| hypothetical protein PHAVU_001G089400g [Phaseolus vulgaris]
Length = 666
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/82 (48%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Frame = +2
Query: 59 LGHALVAASKPSRA---WSPALEQTIRHLLG--APLTPPLVAAVIDXXXXXXXXXXXGLF 223
L A+++ASK W +E+T+ H LG LTP LVA VID G F
Sbjct: 38 LSKAVISASKKRGRQCLWGSQVEETL-HRLGWRQCLTPSLVANVIDPFLLTHYSLALGFF 96
Query: 224 HWASQQPGFAHTPLTYHALLKS 289
+WASQQPGF HTP TYH+LLKS
Sbjct: 97 NWASQQPGFVHTPFTYHSLLKS 118
>gb|ESW33675.1| hypothetical protein PHAVU_001G089400g [Phaseolus vulgaris]
Length = 581
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/82 (48%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Frame = +2
Query: 59 LGHALVAASKPSRA---WSPALEQTIRHLLG--APLTPPLVAAVIDXXXXXXXXXXXGLF 223
L A+++ASK W +E+T+ H LG LTP LVA VID G F
Sbjct: 38 LSKAVISASKKRGRQCLWGSQVEETL-HRLGWRQCLTPSLVANVIDPFLLTHYSLALGFF 96
Query: 224 HWASQQPGFAHTPLTYHALLKS 289
+WASQQPGF HTP TYH+LLKS
Sbjct: 97 NWASQQPGFVHTPFTYHSLLKS 118
>gb|ESW33674.1| hypothetical protein PHAVU_001G089400g [Phaseolus vulgaris]
Length = 671
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/82 (48%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Frame = +2
Query: 59 LGHALVAASKPSRA---WSPALEQTIRHLLG--APLTPPLVAAVIDXXXXXXXXXXXGLF 223
L A+++ASK W +E+T+ H LG LTP LVA VID G F
Sbjct: 38 LSKAVISASKKRGRQCLWGSQVEETL-HRLGWRQCLTPSLVANVIDPFLLTHYSLALGFF 96
Query: 224 HWASQQPGFAHTPLTYHALLKS 289
+WASQQPGF HTP TYH+LLKS
Sbjct: 97 NWASQQPGFVHTPFTYHSLLKS 118
>ref|XP_004498363.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g14080-like isoform X1 [Cicer arietinum]
Length = 640
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Frame = +2
Query: 50 ARRLGHALVAASKPSR--------AWSPALEQTIRHLLGAPLTPPLVAAVIDXXXXXXXX 205
A+R+ A++++S +W+ +EQT+ + L LTP LV+++ID
Sbjct: 11 AQRISRAIISSSNKQTKGNNHHHYSWNSNIEQTLHNNLNHQLTPSLVSSIIDPFLLNHHS 70
Query: 206 XXXGLFHWASQQPGFAHTPLTYHALLKS 289
G F+WASQQPGF HT T+H++LKS
Sbjct: 71 LALGFFNWASQQPGFNHTSTTFHSILKS 98
>ref|XP_002512901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547912|gb|EEF49404.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 655
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Frame = +2
Query: 50 ARRLGHALVAASKP-----SRAWSPALEQTIRHLLGAP-LTPPLVAAVIDXXXXXXXXXX 211
A R+ AL++AS +R W+P+LE + ++ L+P LVA VID
Sbjct: 9 ATRISQALISASNSRSPTQTRPWTPSLESVLHRIVSRDSLSPSLVAQVIDPCLLTHHSLA 68
Query: 212 XGLFHWASQQPGFAHTPLTYHALLKS 289
G F+WASQQPGF H LTY ++LKS
Sbjct: 69 LGFFNWASQQPGFTHNSLTYDSILKS 94
>dbj|BAB08287.1| unnamed protein product [Arabidopsis thaliana]
Length = 663
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = +2
Query: 50 ARRLGHALVAASKPSRA---WSPALEQTIRHLLGA--PLTPPLVAAVIDXXXXXXXXXXX 214
A R+G L+ S SRA WSP +EQ++ H LG ++P LVA VID
Sbjct: 8 AVRIGRELLKVSGSSRAARIWSPLIEQSL-HGLGFRHSISPSLVARVIDPFLLNHHSLAL 66
Query: 215 GLFHWASQQPGFAHTPLTYHALLKS 289
G F+WA+QQPG++H ++YH++ KS
Sbjct: 67 GFFNWAAQQPGYSHDSISYHSIFKS 91
>ref|NP_196912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635762|sp|Q9FMU2.2|PP380_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g14080 gi|332004602|gb|AED91985.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = +2
Query: 50 ARRLGHALVAASKPSRA---WSPALEQTIRHLLGA--PLTPPLVAAVIDXXXXXXXXXXX 214
A R+G L+ S SRA WSP +EQ++ H LG ++P LVA VID
Sbjct: 8 AVRIGRELLKVSGSSRAARIWSPLIEQSL-HGLGFRHSISPSLVARVIDPFLLNHHSLAL 66
Query: 215 GLFHWASQQPGFAHTPLTYHALLKS 289
G F+WA+QQPG++H ++YH++ KS
Sbjct: 67 GFFNWAAQQPGYSHDSISYHSIFKS 91