BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00024065
         (524 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB89950.1| hypothetical protein L484_023602 [Morus notabilis]     149   3e-34
ref|NP_187518.1| pentatricopeptide repeat-containing protein [Ar...   136   3e-30
ref|XP_002884709.1| pentatricopeptide repeat-containing protein ...   135   7e-30
emb|CBI15896.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]   134   1e-29
gb|EMJ06165.1| hypothetical protein PRUPE_ppa002297mg [Prunus pe...   133   3e-29
ref|XP_004305146.1| PREDICTED: pentatricopeptide repeat-containi...   131   8e-29
ref|XP_006429305.1| hypothetical protein CICLE_v10011394mg [Citr...   130   1e-28
ref|XP_006480966.1| PREDICTED: pentatricopeptide repeat-containi...   129   4e-28
ref|XP_006407714.1| hypothetical protein EUTSA_v10020196mg [Eutr...   129   5e-28
ref|XP_006299210.1| hypothetical protein CARUB_v10015357mg [Caps...   126   3e-27
gb|EOY07289.1| Pentatricopeptide repeat (PPR) superfamily protei...   125   8e-27
ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
gb|ESW12381.1| hypothetical protein PHAVU_008G107400g, partial [...   122   6e-26
ref|XP_002322960.2| pentatricopeptide repeat-containing family p...   121   8e-26
ref|XP_002533891.1| pentatricopeptide repeat-containing protein,...   120   1e-25
ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containi...   119   5e-25
ref|XP_004246847.1| PREDICTED: pentatricopeptide repeat-containi...   118   9e-25

>gb|EXB89950.1| hypothetical protein L484_023602 [Morus notabilis]
          Length = 692

 Score =  149 bits (377), Expect = 3e-34
 Identities = 74/141 (52%), Positives = 91/141 (64%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   F  + E FGC+P VR++N+LL+A V A RWD+AE FFAYFS      PNLQSYN
Sbjct: 95  DQALDVFRRMDEIFGCKPEVRSYNSLLNAFVEANRWDKAEQFFAYFSGSRGVSPNLQSYN 154

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           +LIK LC                  GL+PN VSY T+IN ++K G    ALE+FDEM ER
Sbjct: 155 VLIKVLCKKRRFEKAKKLLDWMWSEGLKPNLVSYGTLINELVKNGKLWNALEVFDEMLER 214

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            V PDV+CYN+LIDGFL+ G+
Sbjct: 215 GVTPDVMCYNILIDGFLRKGD 235



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/126 (27%), Positives = 62/126 (49%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           G  P V  +N L+D  +     ++A+  +     G+   PN  +YN++I GLC       
Sbjct: 215 GVTPDVMCYNILIDGFLRKGDLEKAKQIWERLLEGSEVYPNAVTYNVMINGLCKCGKFNE 274

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                        EP+  +YS++I+ + +  +   A +++ EM E  V+PDVV YN +++
Sbjct: 275 GFEMWNRMKKNEREPDLFTYSSLIHGLCEAKNVDAAEQVYREMVESGVSPDVVTYNAMLN 334

Query: 504 GFLKNG 521
           GF + G
Sbjct: 335 GFCRAG 340


>ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g09060 gi|5923671|gb|AAD56322.1|AC009326_9
           hypothetical protein [Arabidopsis thaliana]
           gi|332641194|gb|AEE74715.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  136 bits (342), Expect = 3e-30
 Identities = 71/138 (51%), Positives = 86/138 (62%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   F  +RE FGCEP +R++N LL+A V A++W + ES FAYF + A   PNLQ+YN
Sbjct: 95  DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET-AGVAPNLQTYN 153

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           +LIK  C                  G +P+  SYSTVIN + K G    ALELFDEM ER
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213

Query: 462 NVAPDVVCYNVLIDGFLK 515
            VAPDV CYN+LIDGFLK
Sbjct: 214 GVAPDVTCYNILIDGFLK 231



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/127 (28%), Positives = 63/127 (49%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           GC P V ++N L+  L  A ++ +A +F         + P+L++Y+IL+ GLC       
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG-WKPDLKTYSILLCGLCRDRKIDL 552

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                      GLE + + ++ +I+ +  VG    A+ +   M  RN   ++V YN L++
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612

Query: 504 GFLKNGE 524
           GF K G+
Sbjct: 613 GFFKVGD 619



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/141 (26%), Positives = 65/141 (46%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           DDA   F  + E  G  P V  +N L+D  +  +    A   +      +   PN++++N
Sbjct: 201 DDALELFDEMSER-GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           I+I GL                     E +  +YS++I+ +   G+  +A  +F+E+ ER
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
             + DVV YN ++ GF + G+
Sbjct: 320 KASIDVVTYNTMLGGFCRCGK 340


>ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330549|gb|EFH60968.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 689

 Score =  135 bits (339), Expect = 7e-30
 Identities = 71/138 (51%), Positives = 86/138 (62%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   F  +RE FGCEP +R++N LL+A V A++W + ES FAYF + A   PNLQ+YN
Sbjct: 95  DRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFET-AGVAPNLQTYN 153

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           +LIK  C                  G +P+  SYSTVIN + K G    ALELFDEM ER
Sbjct: 154 VLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSER 213

Query: 462 NVAPDVVCYNVLIDGFLK 515
            VAPDV CYN+LIDGFLK
Sbjct: 214 RVAPDVTCYNILIDGFLK 231


>emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  134 bits (337), Expect = 1e-29
 Identities = 67/141 (47%), Positives = 88/141 (62%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   F  + E FGC+P +R++N+LL+AL+ + +WD+AESFF YF +     PNLQ+YN
Sbjct: 95  DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMG-LSPNLQTYN 153

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           ILIK  C                  G  P+  SY T+INS+ K G+ + AL+LFDEM ER
Sbjct: 154 ILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 213

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            V PDV CYN+LIDGF K G+
Sbjct: 214 GVTPDVACYNILIDGFFKKGD 234



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 40/139 (28%), Positives = 61/139 (43%)
 Frame = +3

Query: 105 DAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNI 284
           DA   F  + E  G  P V  +N L+D          A   +     G    PN+ SYN+
Sbjct: 202 DALKLFDEMPER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 260

Query: 285 LIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERN 464
           +I GLC                      +  +YST+I+ +   G+   A  ++ EM E  
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 320

Query: 465 VAPDVVCYNVLIDGFLKNG 521
           V+PDVV YN +++G+L+ G
Sbjct: 321 VSPDVVVYNTMLNGYLRAG 339



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/127 (28%), Positives = 59/127 (46%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           GC+P     NA+++  V A + + A  FF    S   FP  + +YN LI GL        
Sbjct: 459 GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP-TVVTYNTLINGLSKAERFSE 517

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                      G +PN ++YS ++N + +      AL L+ +  E+   PDV  +N++I 
Sbjct: 518 AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIH 577

Query: 504 GFLKNGE 524
           G   +G+
Sbjct: 578 GLCSSGK 584


>ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  134 bits (337), Expect = 1e-29
 Identities = 67/141 (47%), Positives = 88/141 (62%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   F  + E FGC+P +R++N+LL+AL+ + +WD+AESFF YF +     PNLQ+YN
Sbjct: 95  DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMG-LSPNLQTYN 153

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           ILIK  C                  G  P+  SY T+INS+ K G+ + AL+LFDEM ER
Sbjct: 154 ILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 213

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            V PDV CYN+LIDGF K G+
Sbjct: 214 GVTPDVACYNILIDGFFKKGD 234



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 40/139 (28%), Positives = 61/139 (43%)
 Frame = +3

Query: 105 DAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNI 284
           DA   F  + E  G  P V  +N L+D          A   +     G    PN+ SYN+
Sbjct: 202 DALKLFDEMPER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 260

Query: 285 LIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERN 464
           +I GLC                      +  +YST+I+ +   G+   A  ++ EM E  
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 320

Query: 465 VAPDVVCYNVLIDGFLKNG 521
           V+PDVV YN +++G+L+ G
Sbjct: 321 VSPDVVVYNTMLNGYLRAG 339



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/127 (28%), Positives = 59/127 (46%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           GC+P     NA+++  V A + + A  FF    S   FP  + +YN LI GL        
Sbjct: 459 GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP-TVVTYNTLINGLSKAERFSE 517

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                      G +PN ++YS ++N + +      AL L+ +  E+   PDV  +N++I 
Sbjct: 518 AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIH 577

Query: 504 GFLKNGE 524
           G   +G+
Sbjct: 578 GLCSSGK 584


>emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  134 bits (337), Expect = 1e-29
 Identities = 67/141 (47%), Positives = 88/141 (62%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   F  + E FGC+P +R++N+LL+AL+ + +WD+AESFF YF +     PNLQ+YN
Sbjct: 70  DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMG-LSPNLQTYN 128

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           ILIK  C                  G  P+  SY T+INS+ K G+ + AL+LFDEM ER
Sbjct: 129 ILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 188

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            V PDV CYN+LIDGF K G+
Sbjct: 189 GVTPDVACYNILIDGFFKKGD 209



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/124 (28%), Positives = 62/124 (50%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           GC P V  +N L++ L  A R+ +A +          + PN+ +Y++L+ GLC       
Sbjct: 469 GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKG-WKPNMITYSLLMNGLCQGKKLDM 527

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                      G +P+   ++ +I+ +   G    AL+L+ EM +RN  P++V +N L++
Sbjct: 528 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLME 587

Query: 504 GFLK 515
           GF K
Sbjct: 588 GFYK 591



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 40/139 (28%), Positives = 61/139 (43%)
 Frame = +3

Query: 105 DAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNI 284
           DA   F  + E  G  P V  +N L+D          A   +     G    PN+ SYN+
Sbjct: 177 DALKLFDEMPER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 235

Query: 285 LIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERN 464
           +I GLC                      +  +YST+I+ +   G+   A  ++ EM E  
Sbjct: 236 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 295

Query: 465 VAPDVVCYNVLIDGFLKNG 521
           V+PDVV YN +++G+L+ G
Sbjct: 296 VSPDVVVYNTMLNGYLRAG 314



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 36/127 (28%), Positives = 59/127 (46%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           GC+P     NA+++  V A + + A  FF    S   FP  + +YN LI GL        
Sbjct: 434 GCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFP-TVVTYNTLINGLSKAERFSE 492

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                      G +PN ++YS ++N + +      AL L+ +  E+   PDV  +N++I 
Sbjct: 493 AYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIH 552

Query: 504 GFLKNGE 524
           G   +G+
Sbjct: 553 GLCSSGK 559



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/121 (23%), Positives = 59/121 (48%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           G +P +  ++ L++ L   ++ D A + +        F P+++ +NI+I GLC       
Sbjct: 504 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG-FKPDVKMHNIIIHGLCSSGKVED 562

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                         PN V+++T++    KV  F RA +++D + +  + PD++ YN+ + 
Sbjct: 563 ALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLK 622

Query: 504 G 506
           G
Sbjct: 623 G 623


>gb|EMJ06165.1| hypothetical protein PRUPE_ppa002297mg [Prunus persica]
          Length = 690

 Score =  133 bits (334), Expect = 3e-29
 Identities = 65/141 (46%), Positives = 89/141 (63%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A A F  + E FGC P +R++N+LL+A + + +W++AE FFAYF +     PNLQ+YN
Sbjct: 95  DKALAVFQQMEEIFGCAPGIRSYNSLLNAFIESNQWERAEKFFAYFET-VGLSPNLQTYN 153

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           ILIK  C                  GL+P+  SY T+IN + K G+   ALE+FDEM ER
Sbjct: 154 ILIKISCKKKQFEKAKALLSWMWEKGLKPDVFSYGTLINGLAKSGNLCDALEVFDEMVER 213

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            V+PDV+CYN+LIDGF + G+
Sbjct: 214 GVSPDVMCYNILIDGFFRKGD 234



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/138 (28%), Positives = 67/138 (48%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           +DA   F  +R  F C P V ++N L++ L  A+R+  A  F         + P++ +Y+
Sbjct: 481 EDAIFFFRGMRTKF-CSPNVISYNTLINGLCKAKRFSDAYVFVREMLEEG-WKPDVITYS 538

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           +L+ GLC                  G EP+   ++ +I+ +   G    AL+L+ +M   
Sbjct: 539 LLMDGLCQDRKIDMALNLWHQALDKGSEPDVTMHNIIIHGLCSAGKAEDALQLYFQMGRW 598

Query: 462 NVAPDVVCYNVLIDGFLK 515
           N  P++V YN L++GF K
Sbjct: 599 NCVPNLVTYNTLMEGFYK 616


>ref|XP_004305146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Fragaria vesca subsp. vesca]
          Length = 696

 Score =  131 bits (330), Expect = 8e-29
 Identities = 65/141 (46%), Positives = 89/141 (63%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   FH +RE FGCEP +R++NALL+A + + +WD+AE  FAYF +     PNLQ+YN
Sbjct: 95  DKALEIFHQMREIFGCEPGIRSYNALLNAFIESNQWDRAEQLFAYFET-VGLVPNLQTYN 153

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
            LIK  C                  GL+P+ +SY  +IN++ K G    ALE+FDEM ER
Sbjct: 154 TLIKISCKKRQFEKARRLLDWMWEKGLKPDVMSYGVLINALAKNGKMGDALEVFDEMPER 213

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            V+PDV+CYN+LIDG+ + G+
Sbjct: 214 GVSPDVMCYNILIDGWFRRGD 234



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFF-AYFSSGARFPPNLQSY 278
           +DA   F  +   + C P V ++N L++ L   RR+  A  F       G +   ++ +Y
Sbjct: 481 EDAICFFKAMSTKY-CSPNVVSYNTLINGLCKVRRYSDAYVFVKEMLEKGLKL--DVITY 537

Query: 279 NILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCE 458
           ++LI GLC                  G EP+   Y+ +I+ +   G    AL+L+ +M  
Sbjct: 538 SLLIDGLCQGRKIDMALNLWNQALDKGFEPDVTMYNIMIHGLCSAGKAEGALQLYFQMGC 597

Query: 459 RNVAPDVVCYNVLIDGFLK 515
           RN  P++V +N L++GF K
Sbjct: 598 RNCDPNLVTHNTLMEGFYK 616



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
 Frame = +3

Query: 105 DAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAY----FSSGARFPPNLQ 272
           DA   F  + E  G  P V  +N L+D     RR D AE+   +      SGA   PN+ 
Sbjct: 202 DALEVFDEMPER-GVSPDVMCYNILIDGWF--RRGDYAEAKEVWERLVMDSGAY--PNVV 256

Query: 273 SYNILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEM 452
           SYN++I GLC                      +  + S++IN + K G+   A  ++ +M
Sbjct: 257 SYNVMISGLCKCGRFGESLEIWDRMKRNERGCDLFTCSSLINGLCKAGNVDEAEIVYKDM 316

Query: 453 CERNVAPDVVCYNVLIDGFLKNGE 524
             + V PDVV YN +++GF ++G+
Sbjct: 317 VGKGVMPDVVVYNAMLNGFCRDGK 340



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/127 (26%), Positives = 59/127 (46%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           G +P +   N+L+   +   + + A  FF   S+     PN+ SYN LI GLC       
Sbjct: 459 GYKPNLHVCNSLIYGFIQVSKLEDAICFFKAMST-KYCSPNVVSYNTLINGLCKVRRYSD 517

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                      GL+ + ++YS +I+ + +      AL L+++  ++   PDV  YN++I 
Sbjct: 518 AYVFVKEMLEKGLKLDVITYSLLIDGLCQGRKIDMALNLWNQALDKGFEPDVTMYNIMIH 577

Query: 504 GFLKNGE 524
           G    G+
Sbjct: 578 GLCSAGK 584


>ref|XP_006429305.1| hypothetical protein CICLE_v10011394mg [Citrus clementina]
           gi|557531362|gb|ESR42545.1| hypothetical protein
           CICLE_v10011394mg [Citrus clementina]
          Length = 559

 Score =  130 bits (328), Expect = 1e-28
 Identities = 69/141 (48%), Positives = 88/141 (62%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   F  + E FGCE  VR++NALL+A V +++WD+AESF +YF + A   PNLQ+YN
Sbjct: 90  DKALDVFQRMNEIFGCEAGVRSYNALLNAFVESKQWDRAESFISYFET-AGISPNLQTYN 148

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           ILIK LC                  GL+P+  SY TVIN ++K G    AL +FDEM ER
Sbjct: 149 ILIKILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 208

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            V  +VVCYN+LIDGF K G+
Sbjct: 209 GVETNVVCYNILIDGFFKKGD 229



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/127 (25%), Positives = 55/127 (43%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           G E  V  +N L+D       + +A+  +          PN+ +YN++I GLC       
Sbjct: 209 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 268

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                        E +  +Y + I+ + K G+   A  ++ EM E  +  D V YN +ID
Sbjct: 269 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 328

Query: 504 GFLKNGE 524
           GF + G+
Sbjct: 329 GFCRAGK 335


>ref|XP_006480966.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Citrus sinensis]
          Length = 686

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/141 (48%), Positives = 88/141 (62%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   F  + E FGCE  VR++NALL+A V +++WD+AESF +YF + A   PNLQ++N
Sbjct: 90  DKALDVFQRMNEIFGCEAGVRSYNALLNAFVESKQWDRAESFISYFET-AGISPNLQTFN 148

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           ILIK LC                  GL+P+  SY TVIN ++K G    AL +FDEM ER
Sbjct: 149 ILIKILCRKRQFEKAKRFLNSLWEKGLKPDVYSYGTVINGLVKSGDLLGALAVFDEMFER 208

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            V  +VVCYN+LIDGF K G+
Sbjct: 209 GVETNVVCYNILIDGFFKKGD 229



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 37/127 (29%), Positives = 61/127 (48%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           GC P V ++N L++ L    R+ +A  F         + P++ +Y++LI GLC       
Sbjct: 489 GCSPTVVSYNTLINGLCKVERFGEAYGFVKEMLEKG-WKPDMITYSLLINGLCQSKKIDV 547

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                      G  P+   Y+ +I+ +   G    AL+L+  M +RN  P++V YN L+D
Sbjct: 548 ALKLWCQFLQKGFTPDVTMYNILIHGLCSAGKVEDALQLYSNMKKRNCVPNLVTYNTLMD 607

Query: 504 GFLKNGE 524
           G  K G+
Sbjct: 608 GLFKTGD 614



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/121 (27%), Positives = 61/121 (50%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           G +P +  ++ L++ L  +++ D A   +  F     F P++  YNILI GLC       
Sbjct: 524 GWKPDMITYSLLINGLCQSKKIDVALKLWCQFLQKG-FTPDVTMYNILIHGLCSAGKVED 582

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                         PN V+Y+T+++ + K G   +ALE+++ + E  + PD++ YN+ + 
Sbjct: 583 ALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITLK 642

Query: 504 G 506
           G
Sbjct: 643 G 643



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/127 (25%), Positives = 55/127 (43%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           G E  V  +N L+D       + +A+  +          PN+ +YN++I GLC       
Sbjct: 209 GVETNVVCYNILIDGFFKKGDYMRAKEIWERLVMETSVYPNVVTYNVMINGLCKCGRFDE 268

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                        E +  +Y + I+ + K G+   A  ++ EM E  +  D V YN +ID
Sbjct: 269 CLEMWDRMKKNEREKDSFTYCSFIHGLCKAGNVEGAERVYREMVESGIFVDAVTYNAMID 328

Query: 504 GFLKNGE 524
           GF + G+
Sbjct: 329 GFCRAGK 335


>ref|XP_006407714.1| hypothetical protein EUTSA_v10020196mg [Eutrema salsugineum]
           gi|557108860|gb|ESQ49167.1| hypothetical protein
           EUTSA_v10020196mg [Eutrema salsugineum]
          Length = 687

 Score =  129 bits (323), Expect = 5e-28
 Identities = 68/138 (49%), Positives = 84/138 (60%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   F  +RE FGCEP +R++N+LL A V A +W + ES FAY  + A   PNLQ+YN
Sbjct: 95  DRALDVFQRMREIFGCEPGIRSYNSLLSAFVEAEQWAKVESLFAYIET-AGLAPNLQTYN 153

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           +LIK  C                  GL+P+  SYSTVIN + K G+   AL+LFDEM ER
Sbjct: 154 VLIKMPCKKKQFEKAKDLLDCMWKEGLKPDVYSYSTVINDLAKAGNLGDALKLFDEMSER 213

Query: 462 NVAPDVVCYNVLIDGFLK 515
            VA DV CYN+LID FLK
Sbjct: 214 GVAADVTCYNILIDAFLK 231



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/127 (25%), Positives = 60/127 (47%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           GC P + ++N L+D    + ++ +A +         R  P+L++Y+ L+ GLC       
Sbjct: 494 GCWPTIVSYNILIDGFCKSGKFGEASAVVKEMLENGR-KPDLRTYSSLLNGLCRDGKIEL 552

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                      GLEP+   ++ +I+ +   G    A+ +   M  RN   ++V YN L++
Sbjct: 553 ALALWHQSLQSGLEPDVRIHNILIHGLCSAGKLDDAMNVVANMEHRNCVANLVTYNTLME 612

Query: 504 GFLKNGE 524
           GF K G+
Sbjct: 613 GFFKVGD 619



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/119 (27%), Positives = 53/119 (44%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           G EP VR HN L+  L  A + D A +  A          NL +YN L++G         
Sbjct: 564 GLEPDVRIHNILIHGLCSAGKLDDAMNVVANMEH-RNCVANLVTYNTLMEGFFKVGDINR 622

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLI 500
                      GL+P+ +SY+ ++  +      + A+E FD+     + P VV +N+L+
Sbjct: 623 ATVVLGYMYKMGLQPDIISYNIILKGLCMCRRVSDAIEFFDDARNHGIFPTVVTWNILV 681


>ref|XP_006299210.1| hypothetical protein CARUB_v10015357mg [Capsella rubella]
           gi|482567919|gb|EOA32108.1| hypothetical protein
           CARUB_v10015357mg [Capsella rubella]
          Length = 687

 Score =  126 bits (317), Expect = 3e-27
 Identities = 68/138 (49%), Positives = 83/138 (60%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   F  + E FGCEP +R++N LL+ALV A+RW + ES FAY  + A   PNLQ+YN
Sbjct: 95  DRALDVFQRMVEIFGCEPGIRSYNTLLNALVEAKRWVEVESLFAYLET-AGVAPNLQTYN 153

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           +LIK  C                    +P+  SYSTVIN + K G    AL+LFDEM ER
Sbjct: 154 VLIKMYCKRKQFEKARGFLDWMWKARFKPDVFSYSTVINDLAKAGKLDDALDLFDEMSER 213

Query: 462 NVAPDVVCYNVLIDGFLK 515
            VAPDV CYN+LIDG LK
Sbjct: 214 GVAPDVTCYNILIDGSLK 231



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/124 (27%), Positives = 61/124 (49%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           GC P V ++N L+DAL  A ++ +A +      +   + P+L +Y++L+ GL        
Sbjct: 494 GCRPTVVSYNILIDALCKAGKFGEASTVVKEMLANG-WKPDLITYSVLLDGLRHDRKIDL 552

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                      GLEP+   ++ +I+ +  +G    A+ +   M  RN   ++V YN L++
Sbjct: 553 ALELWHQFLQSGLEPDVRMHNILIHHLCSIGKLDDAVIVMANMEHRNCIANLVTYNTLME 612

Query: 504 GFLK 515
           GF K
Sbjct: 613 GFFK 616


>gb|EOY07289.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
           [Theobroma cacao] gi|508715393|gb|EOY07290.1|
           Pentatricopeptide repeat (PPR) superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 685

 Score =  125 bits (313), Expect = 8e-27
 Identities = 62/133 (46%), Positives = 80/133 (60%)
 Frame = +3

Query: 117 AFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKG 296
           +F  ++  FGCEP +R++N LL+A   + RW+QAESFF YF +     PNLQ+YNILIK 
Sbjct: 100 SFQRMKRIFGCEPGIRSYNTLLNAFAESNRWEQAESFFKYFET-VGVKPNLQTYNILIKI 158

Query: 297 LCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPD 476
            C                  G  PN  SY T+IN ++K G    A+E+FDEM  R V PD
Sbjct: 159 ACRKEHFEKAKRLLDWIWKMGFHPNVQSYGTLINGLVKGGKLVVAMEVFDEMVNRKVTPD 218

Query: 477 VVCYNVLIDGFLK 515
           V+CYN+LIDGF K
Sbjct: 219 VMCYNLLIDGFFK 231



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/127 (26%), Positives = 59/127 (46%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           GC+      N ++   + A R D A  FF    S   + P + SYNILI GLC       
Sbjct: 459 GCKLNPYICNPMIHGFIQASRLDDAVQFFKGMDSMG-YSPTVASYNILISGLCKAERFRE 517

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                      G +P+ ++YS+++  + +  +   AL L+  + ++   PDV+ +N++I 
Sbjct: 518 AYCFLKEMLEKGWKPDMITYSSLMKGLFQGKNVDMALSLWHHVLDKAFKPDVIMHNIIIH 577

Query: 504 GFLKNGE 524
           G    G+
Sbjct: 578 GLCSVGK 584



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/127 (23%), Positives = 60/127 (47%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           G +P +  +++L+  L   +  D A S + +    A F P++  +NI+I GLC       
Sbjct: 529 GWKPDMITYSSLMKGLFQGKNVDMALSLWHHVLDKA-FKPDVIMHNIIIHGLCSVGKVED 587

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                         PN V+++T++  + K G + +A E++  +    + PD++ YN+ + 
Sbjct: 588 ALQLYSKMRRRNCAPNLVTHNTIMEGLYKAGEYEKASEIWTRISTDGLQPDIISYNITLK 647

Query: 504 GFLKNGE 524
           G    G+
Sbjct: 648 GLCSCGK 654


>ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  124 bits (311), Expect = 1e-26
 Identities = 59/141 (41%), Positives = 86/141 (60%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           ++A   F T+   FGC P +R+ N LL+A V + +W +AE+FF YF + AR  PN+++YN
Sbjct: 94  NEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA-ARVSPNVETYN 152

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           +L+K +C                  G+ P+ ++Y T+I  + K G    ALE+FDEM ER
Sbjct: 153 VLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRER 212

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            V PDVVCYN++IDGF K G+
Sbjct: 213 GVEPDVVCYNMIIDGFFKRGD 233


>ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
           gi|449516585|ref|XP_004165327.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  123 bits (309), Expect = 2e-26
 Identities = 62/141 (43%), Positives = 86/141 (60%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   F  + + FGC P +R+ N++L+A + + +W +AE FF YF + A   PNLQ+YN
Sbjct: 95  DQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQT-AGMSPNLQTYN 153

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           ILIK  C                  GL P+ +SY T+IN++ K G+   A+ELFDEM  R
Sbjct: 154 ILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVR 213

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            V PDV+CYN+LIDGFL+ G+
Sbjct: 214 GVNPDVMCYNILIDGFLRKGD 234



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/127 (25%), Positives = 62/127 (48%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           G  P V  +N L+D  +    + +A   +    + +   P++++YNI+I GLC       
Sbjct: 214 GVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDE 273

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                         P+  ++S++I+ + K G+F  A ++F EM E  ++PDV  YN ++ 
Sbjct: 274 SMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLS 333

Query: 504 GFLKNGE 524
           G  + G+
Sbjct: 334 GLFRTGK 340



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
 Frame = +3

Query: 117 AFHTLRETF--GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILI 290
           A+ +L+E    G +P +  ++ L+D L    + D A + + +     R  P+LQ +NI+I
Sbjct: 518 AYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLW-HQCINKRLKPDLQMHNIII 576

Query: 291 KGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVA 470
            GLC                     P+ V+++T++  + K G    AL+++D + E  + 
Sbjct: 577 HGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQ 636

Query: 471 PDVVCYNVLIDG 506
           PD++ YN+   G
Sbjct: 637 PDIISYNITFKG 648


>gb|ESW12381.1| hypothetical protein PHAVU_008G107400g, partial [Phaseolus
           vulgaris]
          Length = 652

 Score =  122 bits (305), Expect = 6e-26
 Identities = 63/141 (44%), Positives = 83/141 (58%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D+A   F T+   FGC P V + N LL+A V + +W +AE FF YF + AR  PN+++YN
Sbjct: 74  DEALHVFQTMPHVFGCTPTVLSFNTLLNAFVESNQWARAEDFFKYFEA-ARVSPNVETYN 132

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           +L K LC                  GL P+ V+Y T+I +  K G    ALE+FDEM ER
Sbjct: 133 VLTKLLCKKRKFEKARGLLTWMSDAGLIPDKVTYGTLIGATAKSGDLGFALEVFDEMRER 192

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            V PDVVCYN++IDGF K G+
Sbjct: 193 GVEPDVVCYNMIIDGFFKRGD 213



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/135 (25%), Positives = 60/135 (44%)
 Frame = +3

Query: 120 FHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGL 299
           F  +RE  G EP V  +N ++D       + +A   +          P++ SYN++I GL
Sbjct: 186 FDEMRER-GVEPDVVCYNMIIDGFFKRGDFVKAREMWERLLREESMFPSVVSYNVMISGL 244

Query: 300 CXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDV 479
           C                      +  +YST+++ + + G    A  +++EM  R V PD 
Sbjct: 245 CKCGRFGEGLEIWERMKMNDRRHDLFTYSTLVHGLSEAGDLDGARRVYEEMVRRGVRPDA 304

Query: 480 VCYNVLIDGFLKNGE 524
           V  N +++GF K G+
Sbjct: 305 VTGNAMLNGFCKAGK 319


>ref|XP_002322960.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550321307|gb|EEF04721.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 694

 Score =  121 bits (304), Expect = 8e-26
 Identities = 64/141 (45%), Positives = 85/141 (60%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           ++A   F  + E FGC+P +R++NALL+A + A   D+AESF AYF +     PNLQ+YN
Sbjct: 95  NEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLDKAESFLAYFET-VGILPNLQTYN 153

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           ILIK                      L+P+  SY TVIN M+K G    ALE+FDEM ER
Sbjct: 154 ILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFER 213

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            + PDV+CYN++IDGF K G+
Sbjct: 214 GLVPDVMCYNIMIDGFFKRGD 234



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
 Frame = +3

Query: 105 DAPAAFHTLRETF--GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSY 278
           D  +A     E F  G  P V  +N ++D       + Q +  +     G+   PN+ +Y
Sbjct: 199 DLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTY 258

Query: 279 NILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCE 458
           N++I GLC                    E +  +YS++I  +  VG+   A+E++ EM +
Sbjct: 259 NVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVK 318

Query: 459 RNVAPDVVCYNVLIDGFLKNGE 524
           R+V  DVV YN L++GF + G+
Sbjct: 319 RSVVVDVVTYNALLNGFCRAGK 340



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/141 (24%), Positives = 64/141 (45%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D+A    H + + +GCE      N L++  V A + ++A  FF    +     P + SYN
Sbjct: 446 DEALGIVHQM-DKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKG-CSPTVVSYN 503

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
            LI GLC                    +P+ ++YS +++ + +      AL L+ ++  +
Sbjct: 504 TLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVK 563

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            + PDV  +N+L+ G    G+
Sbjct: 564 GLEPDVTMHNILMHGLCSAGK 584


>ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526155|gb|EEF28491.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 701

 Score =  120 bits (302), Expect = 1e-25
 Identities = 63/135 (46%), Positives = 81/135 (60%)
 Frame = +3

Query: 120 FHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGL 299
           F  +++ FGC+P VR++N LL+A V    WD+AESF  YF S     PNLQ+YNILIK  
Sbjct: 103 FQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES-MDVSPNLQTYNILIKIS 161

Query: 300 CXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDV 479
           C                   L+P+  SY T+IN M+KVG    AL++FDEM  R V  DV
Sbjct: 162 CKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADV 221

Query: 480 VCYNVLIDGFLKNGE 524
            CYN+LIDGF K+G+
Sbjct: 222 TCYNMLIDGFFKHGD 236


>ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
           gi|357125912|ref|XP_003564633.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  119 bits (297), Expect = 5e-25
 Identities = 64/144 (44%), Positives = 81/144 (56%), Gaps = 3/144 (2%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGA---RFPPNLQ 272
           D A AAF  L    GC P VR+HNALLDA V ARR+  A++FFA  S GA   R  PNLQ
Sbjct: 101 DAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQ 160

Query: 273 SYNILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEM 452
           +YNI+++ LC                  GL P+ ++YST+++  +K      AL L DEM
Sbjct: 161 TYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEM 220

Query: 453 CERNVAPDVVCYNVLIDGFLKNGE 524
               V PD VCYN L+ G  +NGE
Sbjct: 221 PSYEVQPDAVCYNALLGGCFRNGE 244



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/128 (24%), Positives = 56/128 (43%)
 Frame = +3

Query: 138 TFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXX 317
           ++  +P    +NALL        +++A   +          PNL +YN+++ GLC     
Sbjct: 222 SYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMF 281

Query: 318 XXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVL 497
                          +P+ ++Y T+I+ + +      A  ++ EM +  + PDVV YN L
Sbjct: 282 KEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSL 341

Query: 498 IDGFLKNG 521
           + GF   G
Sbjct: 342 LKGFCHAG 349


>ref|XP_004246847.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Solanum lycopersicum]
          Length = 687

 Score =  118 bits (295), Expect = 9e-25
 Identities = 61/141 (43%), Positives = 82/141 (58%)
 Frame = +3

Query: 102 DDAPAAFHTLRETFGCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYN 281
           D A   F  ++  FGC P VR+ N LL+A V + +  +AE FF YF +     PNL++YN
Sbjct: 95  DKAMEIFQNMKNIFGCIPGVRSFNTLLNAFVVSNQLSRAELFFKYFGTMG-VSPNLETYN 153

Query: 282 ILIKGLCXXXXXXXXXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCER 461
           +LIK  C                   L P+  +Y T+IN + K GH  +ALE+FDEM ER
Sbjct: 154 VLIKLACKKRQFDKAKELLDWMWESKLMPDVYTYGTLINGLAKNGHLGKALEVFDEMFER 213

Query: 462 NVAPDVVCYNVLIDGFLKNGE 524
            + PDV CYN+LIDGFLK+G+
Sbjct: 214 GLYPDVTCYNILIDGFLKSGD 234



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 38/127 (29%), Positives = 65/127 (51%)
 Frame = +3

Query: 144 GCEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXX 323
           G  P V  +N L+D  + +  +D  +  +A  +SG+   PN+ SYN++I GLC       
Sbjct: 214 GLYPDVTCYNILIDGFLKSGDYDSGKKIWARLNSGSNVYPNVVSYNVMINGLCRCGKFNE 273

Query: 324 XXXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLID 503
                        + +  + ST+I+ + ++G+   A  +F EM E  ++PDVV Y  L++
Sbjct: 274 GLELWDRMKKNAQKMDLFTCSTLIHGLCELGNVNGAERIFKEMIETGLSPDVVVYGALLN 333

Query: 504 GFLKNGE 524
           G+ K GE
Sbjct: 334 GYCKVGE 340



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/123 (26%), Positives = 56/123 (45%)
 Frame = +3

Query: 147 CEPRVRAHNALLDALVCARRWDQAESFFAYFSSGARFPPNLQSYNILIKGLCXXXXXXXX 326
           C P V  +N L+D L  A R+  A            + P++ +Y++L+ GLC        
Sbjct: 495 CSPTVVTYNVLIDGLCKAERFGDAYKLVEDMLQKG-WTPDMITYSLLMDGLCQSKKVDLA 553

Query: 327 XXXXXXXXXXGLEPNHVSYSTVINSMLKVGHFARALELFDEMCERNVAPDVVCYNVLIDG 506
                     G +P+    + +I+ +   G+   AL+LF  M +    P++V YN L++G
Sbjct: 554 LKLLSQIVSKGFKPDVTMVNIIIHGLCSAGNLDNALQLFLSMSQWECLPNLVTYNTLMEG 613

Query: 507 FLK 515
           F K
Sbjct: 614 FYK 616