BLASTX nr result

ID: Stemona21_contig00022036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00022036
         (342 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW09588.1| hypothetical protein PHAVU_009G139400g [Phaseolus...    72   8e-11
ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    65   9e-09
ref|XP_004237458.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    62   6e-08
ref|XP_006362783.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    62   8e-08
ref|XP_002461195.1| hypothetical protein SORBIDRAFT_02g042690 [S...    61   2e-07
ref|XP_006658110.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    60   2e-07
ref|NP_001145996.1| uncharacterized protein LOC100279526 [Zea ma...    60   3e-07
gb|ACG46237.1| ubiquitin-protein ligase [Zea mays]                     60   3e-07
gb|EXC19721.1| F-box/kelch-repeat protein SKIP6 [Morus notabilis]      59   5e-07
gb|EXC19714.1| F-box/kelch-repeat protein SKIP6 [Morus notabilis]      58   1e-06
ref|XP_004958664.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    58   1e-06
ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago t...    58   1e-06
ref|XP_004304859.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    57   2e-06
ref|XP_006827108.1| hypothetical protein AMTR_s00010p00244540 [A...    57   3e-06
gb|EMT19243.1| hypothetical protein F775_08906 [Aegilops tauschii]     57   3e-06
ref|XP_003562462.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    57   3e-06
ref|XP_002532272.1| Protein AFR, putative [Ricinus communis] gi|...    57   3e-06
gb|EXC19727.1| F-box/kelch-repeat protein SKIP6 [Morus notabilis]      56   4e-06
gb|EMJ07396.1| hypothetical protein PRUPE_ppa014715mg [Prunus pe...    56   4e-06
ref|NP_001060610.1| Os07g0673700 [Oryza sativa Japonica Group] g...    56   4e-06

>gb|ESW09588.1| hypothetical protein PHAVU_009G139400g [Phaseolus vulgaris]
          Length = 364

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 40/103 (38%), Positives = 50/103 (48%)
 Frame = +2

Query: 23  PCVVSXXXXXXXXXPLSGLIPGLPDDIAVRCIARVPRPHHPTLAHVXXXXXXXXXXXXXX 202
           PC            P + LIP LPDD+A+ CIAR+PR  HPTL+ V              
Sbjct: 4   PCPSEEEAEAPTTTPPNNLIPSLPDDVALNCIARIPRSRHPTLSLVSKPIRTLLSTPLFF 63

Query: 203 ALRSSLRTAEPLLLLSLRGPSNYSRWLLLHPPGRAPPQLLLHP 331
             R  L   +PLL L+LR P++  +W  LH   R  P LLL P
Sbjct: 64  TTRCLLNCTQPLLYLTLRTPASSLQWFTLH---RTVPSLLLAP 103


>ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 359

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 35/87 (40%), Positives = 47/87 (54%)
 Frame = +2

Query: 71  SGLIPGLPDDIAVRCIARVPRPHHPTLAHVXXXXXXXXXXXXXXALRSSLRTAEPLLLLS 250
           + LIP LP+D+A+ C+AR+PR HHPTL+ V                RS L+  +PLL L+
Sbjct: 15  NNLIPYLPNDVALNCLARIPRSHHPTLSLVSKPIRSLLYSPLLFTTRSLLQCTQPLLYLT 74

Query: 251 LRGPSNYSRWLLLHPPGRAPPQLLLHP 331
           LR   +  +W  LH   R  P  LL P
Sbjct: 75  LRSRDSSLQWFTLH---RTNPNPLLAP 98


>ref|XP_004237458.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Solanum
           lycopersicum]
          Length = 357

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/74 (44%), Positives = 41/74 (55%)
 Frame = +2

Query: 71  SGLIPGLPDDIAVRCIARVPRPHHPTLAHVXXXXXXXXXXXXXXALRSSLRTAEPLLLLS 250
           S LIP LPDDIA++C+ARVPR HHP L+ V                RS LRT E  L L+
Sbjct: 8   SQLIPNLPDDIALQCLARVPRSHHPVLSLVSKSWRCILSSTALYTTRSILRTTETFLYLN 67

Query: 251 LRGPSNYSRWLLLH 292
           +R  S +  + L H
Sbjct: 68  IRVNSTFHWYTLFH 81


>ref|XP_006362783.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Solanum
           tuberosum]
          Length = 357

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/74 (44%), Positives = 41/74 (55%)
 Frame = +2

Query: 71  SGLIPGLPDDIAVRCIARVPRPHHPTLAHVXXXXXXXXXXXXXXALRSSLRTAEPLLLLS 250
           S LIP LPDDIA++C+ARVPR HHP L+ V                RS LRT E  L L+
Sbjct: 8   SQLIPNLPDDIALQCLARVPRSHHPILSLVSKSWRCILSSTALYTTRSILRTTETFLYLN 67

Query: 251 LRGPSNYSRWLLLH 292
           +R  S +  + L H
Sbjct: 68  IRVNSTFHWYTLFH 81


>ref|XP_002461195.1| hypothetical protein SORBIDRAFT_02g042690 [Sorghum bicolor]
           gi|241924572|gb|EER97716.1| hypothetical protein
           SORBIDRAFT_02g042690 [Sorghum bicolor]
          Length = 378

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/90 (47%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
 Frame = +2

Query: 77  LIPGLPDDIAVRCIARVPRPHHPTLAHV--XXXXXXXXXXXXXXALRSSLRTAEPLLLLS 250
           LIP LPDD+AV CIA +PR  HP+LA V                A R +LR +EP +LLS
Sbjct: 21  LIPALPDDLAVHCIALLPRAAHPSLALVSRAFHALLCRHPEPLLAARRALRRSEPHVLLS 80

Query: 251 LRGPSNYSR--WLLLHPPGRAPPQLLLHPP 334
           LR PS+ S   +LLL  PG  PP  L  PP
Sbjct: 81  LRPPSSASPLFFLLLPHPG-WPPLPLPSPP 109


>ref|XP_006658110.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like isoform X1 [Oryza
           brachyantha] gi|573951662|ref|XP_006658111.1| PREDICTED:
           F-box/kelch-repeat protein SKIP6-like isoform X2 [Oryza
           brachyantha]
          Length = 377

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
 Frame = +2

Query: 74  GLIPGLPDDIAVRCIARVPRPHHPTLAHV--XXXXXXXXXXXXXXALRSSLRTAEPLLLL 247
           GLIP LPDD+++ CIA +PR  HP+LA V                A R  LR +EP +LL
Sbjct: 19  GLIPALPDDLSIHCIALLPRAAHPSLALVSRAFHALLCLHPERLLAARRCLRLSEPHILL 78

Query: 248 SLRGPSNYSRWLLLHPPGRAPPQLLLHPP 334
           SLR P++ S    L  P    P L L PP
Sbjct: 79  SLRPPASASPLFFLLLPQPGWPPLPLPPP 107


>ref|NP_001145996.1| uncharacterized protein LOC100279526 [Zea mays]
           gi|223947235|gb|ACN27701.1| unknown [Zea mays]
           gi|414591170|tpg|DAA41741.1| TPA: ubiquitin-protein
           ligase isoform 1 [Zea mays] gi|414591171|tpg|DAA41742.1|
           TPA: ubiquitin-protein ligase isoform 2 [Zea mays]
           gi|414591172|tpg|DAA41743.1| TPA: ubiquitin-protein
           ligase isoform 3 [Zea mays]
          Length = 376

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 43/90 (47%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
 Frame = +2

Query: 77  LIPGLPDDIAVRCIARVPRPHHPTLAHV--XXXXXXXXXXXXXXALRSSLRTAEPLLLLS 250
           LIP LPDD+AV CIA +PR  HP+LA V                A R +LR +EP +LLS
Sbjct: 19  LIPPLPDDLAVHCIALLPRAAHPSLALVSRAFHALLCRHPEPLLAARRTLRCSEPHVLLS 78

Query: 251 LRGPSNYSR--WLLLHPPGRAPPQLLLHPP 334
           LR PS+ S   +LLL  PG  PP  L  PP
Sbjct: 79  LRPPSSASPIFFLLLPHPG-WPPLPLPSPP 107


>gb|ACG46237.1| ubiquitin-protein ligase [Zea mays]
          Length = 376

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 43/90 (47%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
 Frame = +2

Query: 77  LIPGLPDDIAVRCIARVPRPHHPTLAHV--XXXXXXXXXXXXXXALRSSLRTAEPLLLLS 250
           LIP LPDD+AV CIA +PR  HP+LA V                A R +LR +EP +LLS
Sbjct: 19  LIPPLPDDLAVHCIALLPRAAHPSLALVSRAFHALLCRHPEPLLAARRTLRCSEPHVLLS 78

Query: 251 LRGPSNYSR--WLLLHPPGRAPPQLLLHPP 334
           LR PS+ S   +LLL  PG  PP  L  PP
Sbjct: 79  LRPPSSASPIFFLLLPHPG-WPPLPLPSPP 107


>gb|EXC19721.1| F-box/kelch-repeat protein SKIP6 [Morus notabilis]
          Length = 373

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
 Frame = +2

Query: 65  PLSGLIPGLPDDIAVRCIARVPRPHHPTLAHVXXXXXXXXXXXXXXALRSSLRTAEPLLL 244
           P   LIP LPDD+A+ C+AR+PR HHP L+ V              + R  L+  +PLL 
Sbjct: 15  PPPPLIPSLPDDVALNCLARIPRWHHPILSAVSKPLRSLLSSPLFFSTRILLKFTQPLLY 74

Query: 245 LSLR----GPSNYSRWLLLHPPG---RAPPQLLLHP 331
           LSLR      S+ S + LL PP      P + LL P
Sbjct: 75  LSLRLHHPSSSSSSWFALLRPPNPNDAVPTKPLLVP 110


>gb|EXC19714.1| F-box/kelch-repeat protein SKIP6 [Morus notabilis]
          Length = 388

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = +2

Query: 65  PLSGLIPGLPDDIAVRCIARVPRPHHPTLAHVXXXXXXXXXXXXXXALRSSLRTAEPLLL 244
           P   LIP LP+D+A++C+ARVPR +HP LA V              A RS+L + E LL 
Sbjct: 8   PTEILIPSLPNDVALQCLARVPRQYHPVLATVSKPIRSLLSSQEFFAARSALNSTELLLY 67

Query: 245 LSLRGPSNYSR-WLLLHPPGRAPP 313
           L +R  S   R WL ++  GR  P
Sbjct: 68  LLIRNQSGGPRSWLTVY--GRPNP 89


>ref|XP_004958664.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like isoform X1
           [Setaria italica] gi|514737048|ref|XP_004958665.1|
           PREDICTED: F-box/kelch-repeat protein SKIP6-like isoform
           X2 [Setaria italica] gi|514737050|ref|XP_004958666.1|
           PREDICTED: F-box/kelch-repeat protein SKIP6-like isoform
           X3 [Setaria italica]
          Length = 376

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 41/90 (45%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
 Frame = +2

Query: 77  LIPGLPDDIAVRCIARVPRPHHPTLAHV--XXXXXXXXXXXXXXALRSSLRTAEPLLLLS 250
           LIP LPDD+AV CIA +PR  HP+LA V                A R +LR ++  +LLS
Sbjct: 19  LIPALPDDLAVHCIALLPRAAHPSLALVSRAFHALLCRHPEPLLAARRALRLSDSHILLS 78

Query: 251 LRGPSNYSR--WLLLHPPGRAPPQLLLHPP 334
           LR PS+ S   +LLL  PG  PP  L  PP
Sbjct: 79  LRPPSSASLLFFLLLQHPG-WPPLPLPSPP 107


>ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago truncatula]
           gi|355491531|gb|AES72734.1| F-box/kelch-repeat protein
           SKIP6 [Medicago truncatula]
          Length = 356

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/81 (39%), Positives = 41/81 (50%)
 Frame = +2

Query: 71  SGLIPGLPDDIAVRCIARVPRPHHPTLAHVXXXXXXXXXXXXXXALRSSLRTAEPLLLLS 250
           S LIP LPDD+A+ C+ARVPR HH TL  V                RS + + + +L LS
Sbjct: 7   SNLIPSLPDDVAINCLARVPRSHHTTLTLVSKPIHSLLSSSLFFTARSLIPSTQHILYLS 66

Query: 251 LRGPSNYSRWLLLHPPGRAPP 313
           LR  S   ++  LH   R  P
Sbjct: 67  LRTRSTSLQFFTLHNNHRLLP 87


>ref|XP_004304859.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Fragaria vesca
           subsp. vesca]
          Length = 367

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
 Frame = +2

Query: 71  SGLIPGLPDDIAVRCIARVPRPHHPTLAHVXXXXXXXXXXXXXXALRSSLRTAEPLLLLS 250
           S LIP LP D+A  C+AR+PR +HPTL+ +                RS L +A+ LL LS
Sbjct: 18  SELIPSLPYDVASNCLARIPRHYHPTLSVLSKPIRSLLSSPFFFTTRSLLNSAQHLLYLS 77

Query: 251 LRGPSNYSRWLLLH----PPGRAPPQLLLHPP 334
           LR   + S W  L+    P   A   L+  PP
Sbjct: 78  LRSSDHCSTWFALYQNPNPQSDAARLLVPIPP 109


>ref|XP_006827108.1| hypothetical protein AMTR_s00010p00244540 [Amborella trichopoda]
           gi|548831537|gb|ERM94345.1| hypothetical protein
           AMTR_s00010p00244540 [Amborella trichopoda]
          Length = 366

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/71 (40%), Positives = 40/71 (56%)
 Frame = +2

Query: 77  LIPGLPDDIAVRCIARVPRPHHPTLAHVXXXXXXXXXXXXXXALRSSLRTAEPLLLLSLR 256
           LI GLPDD+ ++CIARVPR +H TLA V              + RSSL+TA+  L   +R
Sbjct: 12  LITGLPDDLGLQCIARVPRVYHQTLAQVCKPWRSLVRSELFVSARSSLKTAQHFLYFMVR 71

Query: 257 GPSNYSRWLLL 289
              +  +W +L
Sbjct: 72  THDSCFKWFVL 82


>gb|EMT19243.1| hypothetical protein F775_08906 [Aegilops tauschii]
          Length = 389

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
 Frame = +2

Query: 77  LIPGLPDDIAVRCIARVPRPHHPTLAHV--XXXXXXXXXXXXXXALRSSLRTAEPLLLLS 250
           LIP LPDD+AV+CIA +PR  HPTLA V                A R  LR ++P +++S
Sbjct: 19  LIPVLPDDLAVQCIALLPRAAHPTLALVSRALHALLCLHPEPLLAARCRLRRSDPHIVIS 78

Query: 251 LRGPSNYS-RWLLLHPPGRAPPQLLLHPP 334
           +R PS+ S R+  L P    PP  L  PP
Sbjct: 79  VRPPSSASPRFFRLLPHPGWPPLPLPSPP 107


>ref|XP_003562462.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Brachypodium
           distachyon]
          Length = 378

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/90 (45%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
 Frame = +2

Query: 77  LIPGLPDDIAVRCIARVPRPHHPTLAHV--XXXXXXXXXXXXXXALRSSLRTAEPLLLLS 250
           LIP LPDD+AV CIAR+PR  HP LA V                A R  L  ++P +L+S
Sbjct: 20  LIPVLPDDLAVHCIARLPRAAHPALALVSRALHALLCRHPEPLLAARKRLGLSDPHVLVS 79

Query: 251 LRGPSNYSR--WLLLHPPGRAPPQLLLHPP 334
           LR PS+ S   +LLL  PG  PP  L  PP
Sbjct: 80  LRPPSSASPLFFLLLPQPG-WPPLPLPTPP 108


>ref|XP_002532272.1| Protein AFR, putative [Ricinus communis]
           gi|223528032|gb|EEF30112.1| Protein AFR, putative
           [Ricinus communis]
          Length = 370

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
 Frame = +2

Query: 77  LIPGLPDDIAVRCIARVPRPHHPTLAHVXXXXXXXXXXXXXXALRSSLRTAEPLLLLSLR 256
           LIP LPDDI++  +AR+PR HHP L+ V              A RS L  ++P L LS+R
Sbjct: 19  LIPALPDDISLNILARIPRSHHPLLSLVSKSFHSLFSSPLFYATRSLLNFSQPFLYLSIR 78

Query: 257 GPSNYS-RWLLLH---PPGRAPPQLLL 325
                S RW  L+   P  + PP  L+
Sbjct: 79  FAITSSLRWFTLYQNSPNPKNPPNFLV 105


>gb|EXC19727.1| F-box/kelch-repeat protein SKIP6 [Morus notabilis]
          Length = 375

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/60 (46%), Positives = 37/60 (61%)
 Frame = +2

Query: 77  LIPGLPDDIAVRCIARVPRPHHPTLAHVXXXXXXXXXXXXXXALRSSLRTAEPLLLLSLR 256
           LIP LP+D+A++C+ARVPR +HP LA V              A RSSL + E LL L++R
Sbjct: 13  LIPSLPNDVALQCLARVPRQYHPVLAAVSKPIRSLLSSPELFAARSSLNSTESLLYLTIR 72


>gb|EMJ07396.1| hypothetical protein PRUPE_ppa014715mg [Prunus persica]
          Length = 366

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
 Frame = +2

Query: 77  LIPGLPDDIAVRCIARVPRPHHPTLAHVXXXXXXXXXXXXXXALRSSLRTAEPLLLLSLR 256
           LIP LPDD+A+ CIARVPR ++PTL+ V                RS L + E  L L+LR
Sbjct: 18  LIPSLPDDVALNCIARVPRWYYPTLSIVSRPIRSLLSSPLFFTTRSLLSSTEHFLYLTLR 77

Query: 257 GPSNYSRWLLLH----PPGRAPPQLLLHPP 334
              N S W  L+    P     P +L+  P
Sbjct: 78  LHHNPSAWFTLYQNPNPNNPNNPHVLIPVP 107


>ref|NP_001060610.1| Os07g0673700 [Oryza sativa Japonica Group]
           gi|22831148|dbj|BAC16009.1| SKP1(S-phase kinase
           associated protein) interacting partner 6 (SKIP6)-like
           protein [Oryza sativa Japonica Group]
           gi|33147043|dbj|BAC80132.1| SKP1(S-phase kinase
           associated protein) interacting partner 6 (SKIP6)-like
           protein [Oryza sativa Japonica Group]
           gi|113612146|dbj|BAF22524.1| Os07g0673700 [Oryza sativa
           Japonica Group] gi|215701338|dbj|BAG92762.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215741590|dbj|BAG98085.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 379

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
 Frame = +2

Query: 77  LIPGLPDDIAVRCIARVPRPHHPTLAHV--XXXXXXXXXXXXXXALRSSLRTAEPLLLLS 250
           LIP LPDD+A+ C+A +PR  HP+LA V                A R  LR ++P ++LS
Sbjct: 20  LIPALPDDLAIHCVALLPRAAHPSLALVSRAFHTLLCRDPGPLLAARRRLRLSDPHVILS 79

Query: 251 LRGPSNYSR--WLLLHPPGRAPPQLLLHPP 334
           LR P++ S   +LLL  PG  PP  L  PP
Sbjct: 80  LRPPASASPLFFLLLPHPG-WPPLPLPSPP 108


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