BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00021530
         (1791 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16383.3| unnamed protein product [Vitis vinifera]              649   0.0  
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   649   0.0  
ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   647   0.0  
ref|XP_004507093.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   640   0.0  
ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m...   639   e-180
dbj|BAD95081.1| hypothetical protein [Arabidopsis thaliana]           633   e-179
gb|AAD30642.1|AC006085_15 Unknown protein [Arabidopsis thaliana]...   633   e-179
ref|NP_175542.2| tRNA (5-methylaminomethyl-2-thiouridylate)-meth...   633   e-179
ref|XP_003558694.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   632   e-178
ref|XP_006649485.1| PREDICTED: mitochondrial tRNA-specific 2-thi...   632   e-178
ref|XP_002298404.2| hypothetical protein POPTR_0001s26620g [Popu...   631   e-178
gb|EXB93298.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis]   630   e-178
ref|XP_006280360.1| hypothetical protein CARUB_v10026287mg [Caps...   630   e-178
ref|XP_002468413.1| hypothetical protein SORBIDRAFT_01g045520 [S...   629   e-177
gb|EEC74610.1| hypothetical protein OsI_10221 [Oryza sativa Indi...   629   e-177
ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m...   629   e-177
ref|XP_006470603.1| PREDICTED: mitochondrial tRNA-specific 2-thi...   628   e-177
ref|XP_006393065.1| hypothetical protein EUTSA_v10011432mg [Eutr...   628   e-177
ref|XP_006307321.1| hypothetical protein CARUB_v10008942mg [Caps...   627   e-177
ref|NP_001049129.1| Os03g0174600 [Oryza sativa Japonica Group] g...   626   e-176

>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  649 bits (1673), Expect = 0.0
 Identities = 315/462 (68%), Positives = 370/462 (80%), Gaps = 2/462 (0%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWS+CPW++DLKYA AVC+Q+D
Sbjct: 92   VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEDDLKYAKAVCDQVD 151

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYW NVVS+II EYRCGRTPNPDVLCNTRIKFGAF++A++  +FDYVASG
Sbjct: 152  VPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISSKEFDYVASG 211

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA+V+H   DQ D PSVL LS+DM+KDQTY                LGCI KDEVR LA
Sbjct: 212  HYANVVHSFTDQMDKPSVLELSKDMVKDQTYFLSHLSQIQLKRLIFPLGCIPKDEVRSLA 271

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            + ++LPN+DRKDSQGICFLGK+KFSEFVA+HIGE EGI+LEAETGD LGKHRGFWFYTIG
Sbjct: 272  TKLDLPNRDRKDSQGICFLGKIKFSEFVARHIGEKEGIILEAETGDLLGKHRGFWFYTIG 331

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKDV+NNVVFVSRNYFS+DKRRR FRVGSLKW+S  PP + +QL+
Sbjct: 332  QRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKRRRLFRVGSLKWISREPPGQINQLQ 391

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGPGFY+CS T+EP +   E+VAVV L+EDDQGLAAGQF AFY    CIGSGVIL+
Sbjct: 392  CKVRHGPGFYNCSFTMEPGEDGHEDVAVVQLSEDDQGLAAGQFTAFYQGRSCIGSGVILE 451

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRI-MNLDTNSKGSVPSI*KF*ACQAYGDRM* 534
            SWD + FP+CA+ALEIA+MEDKSKLGKPV+I +  +T  KGS              D++ 
Sbjct: 452  SWDDQGFPVCAKALEIARMEDKSKLGKPVKIKVRPETPPKGS--------------DQID 497

Query: 533  STKL-AEMSNQKLEQLHSLERATQSGRKERS*LIWSWRDREK 411
              KL  E++N +      + R+++   + R  + W  + REK
Sbjct: 498  GIKLDRELANSQAAVTDEISRSSEGEARSRFPMNWLQKIREK 539


>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
          Length = 540

 Score =  649 bits (1673), Expect = 0.0
 Identities = 315/462 (68%), Positives = 370/462 (80%), Gaps = 2/462 (0%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWS+CPW++DLKYA AVC+Q+D
Sbjct: 88   VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEDDLKYAKAVCDQVD 147

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYW NVVS+II EYRCGRTPNPDVLCNTRIKFGAF++A++  +FDYVASG
Sbjct: 148  VPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISSKEFDYVASG 207

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA+V+H   DQ D PSVL LS+DM+KDQTY                LGCI KDEVR LA
Sbjct: 208  HYANVVHSFTDQMDKPSVLELSKDMVKDQTYFLSHLSQIQLKRLIFPLGCIPKDEVRSLA 267

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            + ++LPN+DRKDSQGICFLGK+KFSEFVA+HIGE EGI+LEAETGD LGKHRGFWFYTIG
Sbjct: 268  TKLDLPNRDRKDSQGICFLGKIKFSEFVARHIGEKEGIILEAETGDLLGKHRGFWFYTIG 327

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKDV+NNVVFVSRNYFS+DKRRR FRVGSLKW+S  PP + +QL+
Sbjct: 328  QRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKRRRLFRVGSLKWISREPPGQINQLQ 387

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGPGFY+CS T+EP +   E+VAVV L+EDDQGLAAGQF AFY    CIGSGVIL+
Sbjct: 388  CKVRHGPGFYNCSFTMEPGEDGHEDVAVVQLSEDDQGLAAGQFTAFYQGRSCIGSGVILE 447

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRI-MNLDTNSKGSVPSI*KF*ACQAYGDRM* 534
            SWD + FP+CA+ALEIA+MEDKSKLGKPV+I +  +T  KGS              D++ 
Sbjct: 448  SWDDQGFPVCAKALEIARMEDKSKLGKPVKIKVRPETPPKGS--------------DQID 493

Query: 533  STKL-AEMSNQKLEQLHSLERATQSGRKERS*LIWSWRDREK 411
              KL  E++N +      + R+++   + R  + W  + REK
Sbjct: 494  GIKLDRELANSQAAVTDEISRSSEGEARSRFPMNWLQKIREK 535


>ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis sativus]
            gi|449524848|ref|XP_004169433.1| PREDICTED: tRNA-specific
            2-thiouridylase MnmA-like [Cucumis sativus]
          Length = 538

 Score =  647 bits (1669), Expect = 0.0
 Identities = 300/391 (76%), Positives = 346/391 (88%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWS+CPWD+DLKYA AVC+Q+D
Sbjct: 86   VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWDDDLKYAKAVCDQVD 145

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL++EYW NVVS+II EYRCGRTPNPDVLCNTRIKFGAF++A+++M+FDYVASG
Sbjct: 146  VPLEVVHLTEEYWRNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISNMEFDYVASG 205

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA+VIHPS DQ D PSVL LS+DM+KDQTY                LGCI KDEVR+LA
Sbjct: 206  HYANVIHPSADQMDKPSVLELSKDMVKDQTYFLSHLSQNQLKRLLFPLGCIPKDEVRKLA 265

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            +   LPNKDRKDSQGICFLGK+KFSEFVA+HIGE EG++LEAE+GD+LGKHRGFWFYTIG
Sbjct: 266  AKFNLPNKDRKDSQGICFLGKIKFSEFVARHIGEDEGVILEAESGDFLGKHRGFWFYTIG 325

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKD++NNVVFVSRNYFS DKRRR FRVGSLKW+SG PPD+ ++L+
Sbjct: 326  QRQGLRLPGGPWYVVEKDIKNNVVFVSRNYFSFDKRRRVFRVGSLKWLSGFPPDQFTELQ 385

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGP FYSC++T+E S+   E+VAVVHL+EDDQGLAAGQFAAFY    CIGSGVIL+
Sbjct: 386  CKVRHGPSFYSCNLTMEHSEDGHEDVAVVHLSEDDQGLAAGQFAAFYKGRSCIGSGVILE 445

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRI 618
            SWD + FP+C +A+E A+MEDKSKLGKP++I
Sbjct: 446  SWDDQGFPVCQKAIENAQMEDKSKLGKPIKI 476


>ref|XP_004507093.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cicer arietinum]
          Length = 484

 Score =  640 bits (1650), Expect = 0.0
 Identities = 300/391 (76%), Positives = 337/391 (86%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWS+CPW++DLKYA  VC Q++
Sbjct: 73   VLISGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEDDLKYAKDVCNQVE 132

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYW NVVS+II EY+CGRTPNPDVLCNTRIKFGAFL+A++DM FDYVASG
Sbjct: 133  VPLEVVHLTDEYWKNVVSYIIEEYQCGRTPNPDVLCNTRIKFGAFLDAISDMGFDYVASG 192

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA+VIHPS DQ D PS L LSQDM+KDQTY                LGCI KDEVRRLA
Sbjct: 193  HYANVIHPSADQMDGPSTLELSQDMVKDQTYFLSHLSQSQLKQLLFPLGCIPKDEVRRLA 252

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            +  +LPNKDRKDSQGICFLGK+KFSEFVA+HIGE EGI+LEAETGD+LGKHRGFWFYTIG
Sbjct: 253  TKFDLPNKDRKDSQGICFLGKIKFSEFVARHIGEKEGIILEAETGDFLGKHRGFWFYTIG 312

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKDV+NNVVFVSRNYFSIDKRRR FRVGSLKW+SG PP + SQLR
Sbjct: 313  QRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSIDKRRRVFRVGSLKWLSGLPPSQTSQLR 372

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGPGFY CS+ +E    +  + AVV ++EDDQGLAAGQF AFY    CIGSGVIL+
Sbjct: 373  CKVRHGPGFYDCSLQMELEGENPIDSAVVRISEDDQGLAAGQFTAFYEGRTCIGSGVILE 432

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRI 618
            SWD + FP+C +ALEIA+MEDKSK+G PV+I
Sbjct: 433  SWDDQGFPVCTKALEIARMEDKSKIGNPVKI 463


>ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
            putative [Ricinus communis] gi|223547418|gb|EEF48913.1|
            tRNA
            (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
            putative [Ricinus communis]
          Length = 497

 Score =  639 bits (1647), Expect = e-180
 Identities = 297/391 (75%), Positives = 340/391 (86%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            +LLSGGVDSSVALRLLHAAGH CTAFYLKIWFQEDFENFWS+CPW+EDLKYA AVC+Q+D
Sbjct: 75   LLLSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFENFWSECPWEEDLKYAKAVCDQVD 134

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            +PLE+VHL+DEYW NVVS+II EYRCGRTPNPDVLCNTRIKFGAF++A+ +M+FDYVASG
Sbjct: 135  IPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAINNMEFDYVASG 194

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA VIHPS D+ + PSVL LS+DM+KDQTY                LG I KDEVR+LA
Sbjct: 195  HYAKVIHPSADEINQPSVLELSKDMVKDQTYFLSHLSQAQLRRLIFPLGGISKDEVRKLA 254

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            +L  LPNKDRKDSQGICFLGK+KFSEFVA+HIGEMEGI+LEAETGD+LG HRGFWFYTIG
Sbjct: 255  TLFNLPNKDRKDSQGICFLGKIKFSEFVARHIGEMEGIMLEAETGDFLGNHRGFWFYTIG 314

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKDV+NNVVFVSRNYFS DKRRR  RVGSL+W +GSPP   S+L+
Sbjct: 315  QRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRLLRVGSLRWFNGSPPKETSELQ 374

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGPGFY+CSV IEP + DD++VA+V L EDDQGLAAGQFAAFY    CIGSGVIL+
Sbjct: 375  CKVRHGPGFYNCSVVIEPGEVDDQDVAIVQLCEDDQGLAAGQFAAFYKGRTCIGSGVILE 434

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRI 618
            SW+ + FP+C  ALE+A++EDKS+LGKPV+I
Sbjct: 435  SWNDQGFPVCERALELARIEDKSELGKPVKI 465


>dbj|BAD95081.1| hypothetical protein [Arabidopsis thaliana]
          Length = 497

 Score =  633 bits (1633), Expect = e-179
 Identities = 295/398 (74%), Positives = 339/398 (85%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFW+QCPW++DLKYA  VCEQ+D
Sbjct: 86   VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKYAKHVCEQVD 145

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYW  VVS+II EYRCGRTPNPDVLCNTRIKFGAF++A++DM++DYV SG
Sbjct: 146  VPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISDMEYDYVGSG 205

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA V+HP  DQ D  SVL LSQDM+KDQTY                LGC++KDEVR+LA
Sbjct: 206  HYARVVHPPADQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGCVKKDEVRKLA 265

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            +  +LPNKDRKDSQGICFLGK+KFS+FV +HIGEMEGI+LEAE+GD+LG HRGFWFYTIG
Sbjct: 266  TQFDLPNKDRKDSQGICFLGKIKFSDFVCRHIGEMEGIILEAESGDFLGNHRGFWFYTIG 325

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKD +NNVVFVSRNY+SIDKRRR FRVGSL+W SG P  +  +LR
Sbjct: 326  QRQGLRLPGGPWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVGSLRWNSGKPSGKVRELR 385

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGPGFYSCS  +E     D +VAVVHL+EDDQGLAAGQFAAFY    CIGSGVIL+
Sbjct: 386  CKVRHGPGFYSCSFEME----GDGDVAVVHLDEDDQGLAAGQFAAFYEGTTCIGSGVILE 441

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRIMNLDTNS 597
            SWD +CFP+CA+AL++A +EDK+KLGKPV+IM + T S
Sbjct: 442  SWDDQCFPVCAKALQLAALEDKTKLGKPVKIMTMPTMS 479


>gb|AAD30642.1|AC006085_15 Unknown protein [Arabidopsis thaliana] gi|119935887|gb|ABM06024.1|
            At1g51310 [Arabidopsis thaliana]
          Length = 421

 Score =  633 bits (1632), Expect = e-179
 Identities = 295/398 (74%), Positives = 339/398 (85%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFW+QCPW++DLKYA  VCEQ+D
Sbjct: 10   VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKYAKHVCEQVD 69

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYW  VVS+II EYRCGRTPNPDVLCNTRIKFGAF++A++DM++DYV SG
Sbjct: 70   VPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISDMEYDYVGSG 129

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA V+HP  DQ D  SVL LSQDM+KDQTY                LGC++KDEVR+LA
Sbjct: 130  HYAKVVHPPADQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGCVKKDEVRKLA 189

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            +  +LPNKDRKDSQGICFLGK+KFS+FV +HIGEMEGI+LEAE+GD+LG HRGFWFYTIG
Sbjct: 190  TQFDLPNKDRKDSQGICFLGKIKFSDFVCRHIGEMEGIILEAESGDFLGNHRGFWFYTIG 249

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKD +NNVVFVSRNY+SIDKRRR FRVGSL+W SG P  +  +LR
Sbjct: 250  QRQGLRLPGGPWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVGSLRWNSGKPSGKVRELR 309

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGPGFYSCS  +E     D +VAVVHL+EDDQGLAAGQFAAFY    CIGSGVIL+
Sbjct: 310  CKVRHGPGFYSCSFEME----GDGDVAVVHLDEDDQGLAAGQFAAFYEGTTCIGSGVILE 365

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRIMNLDTNS 597
            SWD +CFP+CA+AL++A +EDK+KLGKPV+IM + T S
Sbjct: 366  SWDDQCFPVCAKALQLAALEDKTKLGKPVKIMTMPTMS 403


>ref|NP_175542.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
            [Arabidopsis thaliana] gi|332194528|gb|AEE32649.1| tRNA
            (5-methylaminomethyl-2-thiouridylate)-methyltransferase
            [Arabidopsis thaliana]
          Length = 497

 Score =  633 bits (1632), Expect = e-179
 Identities = 295/398 (74%), Positives = 339/398 (85%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFW+QCPW++DLKYA  VCEQ+D
Sbjct: 86   VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKYAKHVCEQVD 145

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYW  VVS+II EYRCGRTPNPDVLCNTRIKFGAF++A++DM++DYV SG
Sbjct: 146  VPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISDMEYDYVGSG 205

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA V+HP  DQ D  SVL LSQDM+KDQTY                LGC++KDEVR+LA
Sbjct: 206  HYAKVVHPPADQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGCVKKDEVRKLA 265

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            +  +LPNKDRKDSQGICFLGK+KFS+FV +HIGEMEGI+LEAE+GD+LG HRGFWFYTIG
Sbjct: 266  TQFDLPNKDRKDSQGICFLGKIKFSDFVCRHIGEMEGIILEAESGDFLGNHRGFWFYTIG 325

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKD +NNVVFVSRNY+SIDKRRR FRVGSL+W SG P  +  +LR
Sbjct: 326  QRQGLRLPGGPWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVGSLRWNSGKPSGKVRELR 385

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGPGFYSCS  +E     D +VAVVHL+EDDQGLAAGQFAAFY    CIGSGVIL+
Sbjct: 386  CKVRHGPGFYSCSFEME----GDGDVAVVHLDEDDQGLAAGQFAAFYEGTTCIGSGVILE 441

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRIMNLDTNS 597
            SWD +CFP+CA+AL++A +EDK+KLGKPV+IM + T S
Sbjct: 442  SWDDQCFPVCAKALQLAALEDKTKLGKPVKIMTMPTMS 479


>ref|XP_003558694.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Brachypodium
            distachyon]
          Length = 481

 Score =  632 bits (1630), Expect = e-178
 Identities = 298/395 (75%), Positives = 340/395 (86%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDF NFWS+CPWD+DLKYA AVC++ID
Sbjct: 75   VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFRNFWSECPWDDDLKYAQAVCDKID 134

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+ HLSDEYW++VVSHII EYR GRTPNPDVLCNTRIKFGAFLEA+ ++ FDY+ASG
Sbjct: 135  VPLEVAHLSDEYWNHVVSHIINEYRNGRTPNPDVLCNTRIKFGAFLEAIDNLGFDYIASG 194

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYAHV+HPS +  + PSVL+LS+D +KDQTY                LGCI KDEVR LA
Sbjct: 195  HYAHVVHPSIENVEGPSVLQLSKDKVKDQTYFLSHLSQPQLRRLLFPLGCITKDEVRSLA 254

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            + M+LPN+ RKDSQGICFLGKVKFSEFV +HIGEMEG+LLEAETGDYLG+HRGFWFYTIG
Sbjct: 255  TQMDLPNQGRKDSQGICFLGKVKFSEFVERHIGEMEGVLLEAETGDYLGRHRGFWFYTIG 314

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKDVQNNVVFVSRNY+S+DKRRRTFRVGSL W S S P+ + QL+
Sbjct: 315  QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFSDSGPENDEQLK 374

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRH P F++C+VT E ++ +  +V  VHL+EDDQGLAAGQFAAFY D  C+GSG+ILD
Sbjct: 375  CKVRHSPEFHNCTVTREQTE-ESGDVLAVHLSEDDQGLAAGQFAAFYRDNTCLGSGIILD 433

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRIMNLD 606
            SWD   FP+CA ALEIA+MEDKSKLGKPVRI+NL+
Sbjct: 434  SWDEMSFPVCANALEIARMEDKSKLGKPVRIVNLE 468


>ref|XP_006649485.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like [Oryza
            brachyantha]
          Length = 489

 Score =  632 bits (1629), Expect = e-178
 Identities = 299/395 (75%), Positives = 338/395 (85%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VL+SGGVDSSVALRLLHAAGH CTAFYLKIWFQEDF NFWS+CPWD+DLKY  AVC++I+
Sbjct: 83   VLVSGGVDSSVALRLLHAAGHRCTAFYLKIWFQEDFRNFWSECPWDDDLKYVQAVCDKIN 142

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHLSDEYW++VVSHII EYR G TPNPDVLCNTRIKFGAFLEA+ +M FDY+ASG
Sbjct: 143  VPLEVVHLSDEYWNHVVSHIINEYRSGHTPNPDVLCNTRIKFGAFLEAIENMGFDYIASG 202

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYAHV+HPS D  + PSVL+LS+D +KDQTY                LGCI KDEVRRLA
Sbjct: 203  HYAHVVHPSLDNVEGPSVLQLSKDKVKDQTYFLSHLSQTQLRRLLFPLGCITKDEVRRLA 262

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            + M+LPN+DRKDSQGICFLGKVKFSEFV +HIGEMEGILLEAETGDYLG HRGFWFYTIG
Sbjct: 263  AQMDLPNQDRKDSQGICFLGKVKFSEFVERHIGEMEGILLEAETGDYLGIHRGFWFYTIG 322

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKDV+NNVVFVSRNY+S+DKRRRTFRVGSL W S S P  N QL+
Sbjct: 323  QRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSLDKRRRTFRVGSLNWFSNSGPINNEQLK 382

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRH P F+ C+VT E +  ++  + VVHL+EDDQGLAAGQFAAFY D +C+GSG+ILD
Sbjct: 383  CKVRHSPEFHHCTVTQEQTS-ENRVILVVHLSEDDQGLAAGQFAAFYRDNLCLGSGIILD 441

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRIMNLD 606
            SWD   FP+CA ALEIAKMEDKS+LGKPV+IMNL+
Sbjct: 442  SWDEMNFPVCARALEIAKMEDKSRLGKPVKIMNLE 476


>ref|XP_002298404.2| hypothetical protein POPTR_0001s26620g [Populus trichocarpa]
            gi|550348245|gb|EEE83209.2| hypothetical protein
            POPTR_0001s26620g [Populus trichocarpa]
          Length = 512

 Score =  631 bits (1627), Expect = e-178
 Identities = 299/403 (74%), Positives = 340/403 (84%), Gaps = 1/403 (0%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGH CTAFYLKIWFQEDF NFWS+CPW+EDLK+A  VC+Q+ 
Sbjct: 90   VLLSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFNNFWSECPWEEDLKFAKGVCDQVG 149

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYWSNVVS+II EYRCGRTPNPDVLCNTRIKFGAF++A+ +M+FDYVASG
Sbjct: 150  VPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAINNMEFDYVASG 209

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYAHVIHP  DQ + PSVL LS+D +KDQTY                LGCI K+EVR LA
Sbjct: 210  HYAHVIHPVSDQINKPSVLELSKDKLKDQTYFLSHLTQAQLKRLIFPLGCIPKEEVRNLA 269

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            S  +LPNKDRKDSQGICFLGK+KFSEFV +HIGE EG++LEAETGD+LG HRGFWFYTIG
Sbjct: 270  SKFDLPNKDRKDSQGICFLGKIKFSEFVGRHIGESEGVILEAETGDFLGIHRGFWFYTIG 329

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKDV+NNVVFVSRNYFS+DKRRR+FRVGSLKW+SGSP D  +QL+
Sbjct: 330  QRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKRRRSFRVGSLKWLSGSPTDMTTQLQ 389

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGP FY CSV IE  +   EEV  VHL EDDQGLAAGQF AFY    CIGSGVIL+
Sbjct: 390  CKVRHGPTFYDCSVKIELGEDSPEEVVAVHLCEDDQGLAAGQFTAFYQGRTCIGSGVILE 449

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRI-MNLDTNSKGSV 585
            SWD K FP+C +ALE+A++EDKSKLGKPV+I +  +T+ + SV
Sbjct: 450  SWDDKGFPVCQKALELARLEDKSKLGKPVKIKVKPETSDQESV 492


>gb|EXB93298.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis]
          Length = 580

 Score =  630 bits (1626), Expect = e-178
 Identities = 294/391 (75%), Positives = 337/391 (86%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWS+CPW+EDLKYA AVC QI+
Sbjct: 134  VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEEDLKYAKAVCSQIE 193

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYW NVVS+II EYRCGRTPNPDVLCNTRIKFG+F++A++ M+FDYVASG
Sbjct: 194  VPLEVVHLTDEYWKNVVSYIIDEYRCGRTPNPDVLCNTRIKFGSFMDAISSMEFDYVASG 253

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA+V+H   ++R   SVL LSQDM+KDQTY                LGCI K+EVR+LA
Sbjct: 254  HYANVVHSFTNERGDASVLELSQDMVKDQTYFLSHLSQAQLKRLVFPLGCISKEEVRKLA 313

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
               +LPNKDRKDSQGICFLGK+KFSEFVA+HIGE EGI+LEAETGD+LG HRGFWFYTIG
Sbjct: 314  KKFDLPNKDRKDSQGICFLGKIKFSEFVARHIGEKEGIILEAETGDFLGMHRGFWFYTIG 373

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKDV+NNVVF SRNYFS DKRRR FRVGSLKW++G PPD+  QL+
Sbjct: 374  QRQGLRLPGGPWYVVEKDVKNNVVFASRNYFSFDKRRRIFRVGSLKWLNGLPPDQTCQLQ 433

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGPGFY+CS T+E  ++  E+VAVV L+EDDQGLA GQFAAFY  + C+GSG+IL+
Sbjct: 434  CKVRHGPGFYNCSFTMESGENSGEDVAVVQLSEDDQGLAVGQFAAFYQGKSCLGSGIILE 493

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRI 618
            SWD + FP+C +ALEIAKMEDKS LGKPV+I
Sbjct: 494  SWDDQGFPVCEKALEIAKMEDKSLLGKPVKI 524


>ref|XP_006280360.1| hypothetical protein CARUB_v10026287mg [Capsella rubella]
            gi|482549064|gb|EOA13258.1| hypothetical protein
            CARUB_v10026287mg [Capsella rubella]
          Length = 494

 Score =  630 bits (1624), Expect = e-178
 Identities = 292/398 (73%), Positives = 338/398 (84%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFW+QCPW++DLKYA  VCEQ++
Sbjct: 83   VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKYAKHVCEQVN 142

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYW  VVS+II EYRCGRTPNPDVLCNTRIKFGAF++A++DM++DYVASG
Sbjct: 143  VPLEVVHLTDEYWEKVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISDMEYDYVASG 202

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA V+HP  DQ D  S+L LSQDM+KDQTY                LGC++KDEVR+LA
Sbjct: 203  HYAKVVHPPADQNDSSSLLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGCVKKDEVRKLA 262

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            +  +LPNKDRKDSQGICFLGK+KFS+FV  HIGEMEG++LEAETGD+LG HRGFWFYTIG
Sbjct: 263  TQFDLPNKDRKDSQGICFLGKIKFSDFVGTHIGEMEGVILEAETGDFLGNHRGFWFYTIG 322

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKD +NNVVFVSRNY+SIDK+RR FRVGSL+W+ G P D  S+LR
Sbjct: 323  QRQGLRLPGGPWYVVEKDTKNNVVFVSRNYYSIDKKRRIFRVGSLRWLCGKPSDNVSKLR 382

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGPGFYSCS  +E       +VAVVHL+EDDQGLAAGQFAAFY    CIGSGVIL+
Sbjct: 383  CKVRHGPGFYSCSFEMEAK----GDVAVVHLDEDDQGLAAGQFAAFYEGTTCIGSGVILE 438

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRIMNLDTNS 597
            SWD +CFP+CA+AL++A MEDK+KLGKPV+I+ +   S
Sbjct: 439  SWDDQCFPVCAKALQLAAMEDKTKLGKPVKILTMPVTS 476


>ref|XP_002468413.1| hypothetical protein SORBIDRAFT_01g045520 [Sorghum bicolor]
            gi|241922267|gb|EER95411.1| hypothetical protein
            SORBIDRAFT_01g045520 [Sorghum bicolor]
          Length = 489

 Score =  629 bits (1623), Expect = e-177
 Identities = 294/395 (74%), Positives = 337/395 (85%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VL+SGGVDSSVALRLLHAAGH CTAFYLKIWFQEDF NFWS+CPWDEDLKYA AVC++ID
Sbjct: 82   VLVSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFRNFWSECPWDEDLKYAQAVCDKID 141

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHLSDEYW+ VVSH+I EYRCGRTPNPDVLCNTRIKFGAFLEA+ ++ FDY+ASG
Sbjct: 142  VPLEVVHLSDEYWNYVVSHMINEYRCGRTPNPDVLCNTRIKFGAFLEAIENLGFDYIASG 201

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYAHV+HPS +  + PS+L+LS+D +KDQTY                LGCI KDEVRRLA
Sbjct: 202  HYAHVVHPSTENTEAPSILQLSKDKVKDQTYFLSHLSQPQLRRLLFPLGCITKDEVRRLA 261

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            + M LPN+ RKDSQGICFLGKVKFSEFV +HIGEMEGI+LEAE+GDYLGKHRGFWFYTIG
Sbjct: 262  TQMGLPNQGRKDSQGICFLGKVKFSEFVERHIGEMEGIILEAESGDYLGKHRGFWFYTIG 321

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKDVQNNVVFVSRNY+S+DKRRRTFRVGSL W   S P  N QL+
Sbjct: 322  QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFDSSGPGNNEQLK 381

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRH P F+ C++ I+    ++E+  VVHL+EDDQGLAAGQFAAFY++  C+GSG+ILD
Sbjct: 382  CKVRHSPEFHDCTL-IKEHTEENEDALVVHLSEDDQGLAAGQFAAFYSEHSCLGSGIILD 440

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRIMNLD 606
            SWD   FP+C+ ALEIAK+EDKS LGKPVRI+NL+
Sbjct: 441  SWDKMSFPVCSRALEIAKLEDKSSLGKPVRILNLE 475


>gb|EEC74610.1| hypothetical protein OsI_10221 [Oryza sativa Indica Group]
          Length = 488

 Score =  629 bits (1623), Expect = e-177
 Identities = 298/395 (75%), Positives = 338/395 (85%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VL+SGGVDSSVALRLLHAAGH CTAFYLKIWFQEDF NFWS+CPWD+DLKYA AVC++ID
Sbjct: 82   VLVSGGVDSSVALRLLHAAGHRCTAFYLKIWFQEDFRNFWSECPWDDDLKYAQAVCDKID 141

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHLSDEYW++VVSHII EYR GRTPNPDVLCNTRIKFGAFLEA+ ++ FDY+ASG
Sbjct: 142  VPLEVVHLSDEYWNHVVSHIINEYRSGRTPNPDVLCNTRIKFGAFLEAIENLGFDYIASG 201

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYAHV+HPS D  + PSVL+LS+D +KDQTY                LGCI KDEVRRLA
Sbjct: 202  HYAHVVHPSPDDVEGPSVLQLSKDKVKDQTYFLSHLSQTQLRRLLFPLGCITKDEVRRLA 261

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            + M+LPN+DRKDSQGICFLGKVKFSEFV + IGEMEG+LLEAETGDYLG HRGFWFYTIG
Sbjct: 262  AQMDLPNQDRKDSQGICFLGKVKFSEFVERQIGEMEGVLLEAETGDYLGTHRGFWFYTIG 321

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKDVQNNVVFVSRNY+S+DKRRRTFRVGSL W S S P  N QL+
Sbjct: 322  QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFSNSGPTNNEQLK 381

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRH P F+ C+VT E +  ++  + VV L+EDDQGLAAGQFAAFY D +C+GSG+ILD
Sbjct: 382  CKVRHSPEFHDCTVTQEQTS-ENGVILVVRLSEDDQGLAAGQFAAFYRDNLCLGSGIILD 440

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRIMNLD 606
            SWD   FP+CA ALEIA+MEDKS+LGKPV+IMNL+
Sbjct: 441  SWDEMNFPVCARALEIARMEDKSRLGKPVKIMNLE 475


>ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
            [Arabidopsis lyrata subsp. lyrata]
            gi|297340151|gb|EFH70568.1| tRNA
            (5-methylaminomethyl-2-thiouridylate)-methyltransferase
            [Arabidopsis lyrata subsp. lyrata]
          Length = 500

 Score =  629 bits (1621), Expect = e-177
 Identities = 293/394 (74%), Positives = 334/394 (84%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFW+QCPW++DLKYA  VCEQ+D
Sbjct: 89   VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKYAKHVCEQVD 148

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYW  VVS+II EYRCGRTPNPDVLCNTRIKFGAF++A++DM++DYV SG
Sbjct: 149  VPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISDMEYDYVGSG 208

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA V+HP  DQ D  SVL LSQDM+KDQTY                LGC++KDEVR+LA
Sbjct: 209  HYAKVVHPPVDQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLIFPLGCVKKDEVRKLA 268

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            +  +LPNKDRKDSQGICFLGK+KFS+FV  HIGEMEGI+LEAETGD+LG HRGFWFYTIG
Sbjct: 269  TQFDLPNKDRKDSQGICFLGKIKFSDFVCAHIGEMEGIILEAETGDFLGNHRGFWFYTIG 328

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKD +NNVVFVSRNY+SIDKRRR FRVGSL+W+SG P     +LR
Sbjct: 329  QRQGLRLPGGPWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVGSLRWLSGKPSGNVRELR 388

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGP FYSCS  +E     D +VAVVHL+EDDQGLAAGQFAAFY    CIGSGVIL+
Sbjct: 389  CKVRHGPSFYSCSFEMEA----DGDVAVVHLDEDDQGLAAGQFAAFYEGTTCIGSGVILE 444

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRIMNL 609
            SWD +CFP+CA+AL++A MEDK+KLGKPV+I  +
Sbjct: 445  SWDDQCFPVCAKALQLAAMEDKTKLGKPVKIRTM 478


>ref|XP_006470603.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like [Citrus
            sinensis]
          Length = 525

 Score =  628 bits (1620), Expect = e-177
 Identities = 291/391 (74%), Positives = 338/391 (86%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLH+AGHSCTAFYLKIWFQEDFENFW++CPW+ED+KYA AVC+Q+D
Sbjct: 74   VLLSGGVDSSVALRLLHSAGHSCTAFYLKIWFQEDFENFWTECPWEEDMKYAKAVCDQVD 133

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYW NVVS+II EYRCGRTPNPDVLCNTRIKFGAF++A++ M+FDYVASG
Sbjct: 134  VPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISSMEFDYVASG 193

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA V+H S DQ   PSVL LS+D +KDQTY                LGCI K+EVR+ A
Sbjct: 194  HYAKVVHSSADQEYKPSVLELSKDKVKDQTYFLSHLSQAQLKRLIFPLGCISKEEVRKFA 253

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            +  +LPNKDRKDSQGICFLGK+KFSEFVA+HIGEMEG++LEAETGD+LGKH GFWFYTIG
Sbjct: 254  TQFDLPNKDRKDSQGICFLGKIKFSEFVARHIGEMEGVILEAETGDFLGKHWGFWFYTIG 313

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKDV+NNVVFVSRNY+S DK+RR FRVGSLKW+SG PP+  S+L+
Sbjct: 314  QRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQ 373

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGPGFY+C++ IE  +   E +AVV L+EDDQGLAAGQFAAFY    CIGSGVIL+
Sbjct: 374  CKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILE 433

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRI 618
            SWD + FP+C +ALEIA+MEDKSKLGKP++I
Sbjct: 434  SWDDQGFPVCEKALEIARMEDKSKLGKPIKI 464


>ref|XP_006393065.1| hypothetical protein EUTSA_v10011432mg [Eutrema salsugineum]
            gi|557089643|gb|ESQ30351.1| hypothetical protein
            EUTSA_v10011432mg [Eutrema salsugineum]
          Length = 488

 Score =  628 bits (1620), Expect = e-177
 Identities = 294/395 (74%), Positives = 337/395 (85%), Gaps = 1/395 (0%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFW+QCPW++DLKYA  VCEQ+D
Sbjct: 76   VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKYAKHVCEQVD 135

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYW  VVS+II EYRCGRTPNPDVLCNTRIKFGAF++ ++DM++DY+ASG
Sbjct: 136  VPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDTISDMEYDYIASG 195

Query: 1430 HYAHVIHPS-FDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRL 1254
            HYA V+HP   DQ D  S+L LSQDM+KDQTY                LGC++K+EVR+L
Sbjct: 196  HYAKVVHPPPADQNDSSSLLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGCVKKEEVRKL 255

Query: 1253 ASLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTI 1074
            A+  +LPNKDRKDSQGICFLGK+KFS+FV +HIGEMEGI+LEAETGD+LG HRGFWFYTI
Sbjct: 256  ATKFDLPNKDRKDSQGICFLGKIKFSDFVGRHIGEMEGIILEAETGDFLGNHRGFWFYTI 315

Query: 1073 GQRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQL 894
            GQRQGLRLPGGPWYVVEKD +NNVVFVSRNY+SIDKRRR FRVGSL+W+SG P    SQL
Sbjct: 316  GQRQGLRLPGGPWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVGSLRWLSGKPSGNVSQL 375

Query: 893  RCKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVIL 714
            RCKVRHGPGFYSCS  +E       +VAVVHL+EDDQGLAAGQFAAFY    CIGSGVIL
Sbjct: 376  RCKVRHGPGFYSCSFEMEA----QGDVAVVHLDEDDQGLAAGQFAAFYEGTTCIGSGVIL 431

Query: 713  DSWDGKCFPICAEALEIAKMEDKSKLGKPVRIMNL 609
            +SWD +CFP+CA+ALE+A MEDK+KLGKPV+IM +
Sbjct: 432  ESWDDQCFPVCAKALELAAMEDKTKLGKPVKIMTM 466


>ref|XP_006307321.1| hypothetical protein CARUB_v10008942mg [Capsella rubella]
            gi|482576032|gb|EOA40219.1| hypothetical protein
            CARUB_v10008942mg [Capsella rubella]
          Length = 496

 Score =  627 bits (1618), Expect = e-177
 Identities = 291/398 (73%), Positives = 335/398 (84%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFW QCPW++DLKYA  VCEQ+ 
Sbjct: 85   VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWDQCPWEDDLKYAKHVCEQVG 144

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHL+DEYW  VVS++I EYRCGRTPNPDVLCNTRIKFGAF++A++DM++DYVASG
Sbjct: 145  VPLEVVHLTDEYWERVVSYLIEEYRCGRTPNPDVLCNTRIKFGAFMDAISDMEYDYVASG 204

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYA V+HP  DQ D  S+L LSQDM+KDQTY                LGC++KDEVR+LA
Sbjct: 205  HYAKVVHPPADQNDSSSLLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGCVKKDEVRKLA 264

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            +  +LPNKDRKDSQGICFLGK+KFS+FV +HIGEMEG++LEAETGD+LG HRGFWFYTIG
Sbjct: 265  TQFDLPNKDRKDSQGICFLGKIKFSDFVGRHIGEMEGVILEAETGDFLGNHRGFWFYTIG 324

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEKD +NNVVF SRNY+SIDKRRR FRVGSL+W+SG P    S+LR
Sbjct: 325  QRQGLRLPGGPWYVVEKDTKNNVVFASRNYYSIDKRRRVFRVGSLRWLSGKPSANVSELR 384

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRHGPGFYSCS  +E       +VAVVHL+EDDQGLAAGQFAAFY    CIGSGVIL+
Sbjct: 385  CKVRHGPGFYSCSFEMETK----GDVAVVHLDEDDQGLAAGQFAAFYEGTTCIGSGVILE 440

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRIMNLDTNS 597
            SWD +CFP+CA+AL++A MEDK+KLGKPV+I  +   S
Sbjct: 441  SWDDQCFPVCAKALQLAAMEDKTKLGKPVKIFTIPVTS 478


>ref|NP_001049129.1| Os03g0174600 [Oryza sativa Japonica Group]
            gi|108706458|gb|ABF94253.1| tRNA methyl transferase
            family protein, expressed [Oryza sativa Japonica Group]
            gi|113547600|dbj|BAF11043.1| Os03g0174600 [Oryza sativa
            Japonica Group] gi|215737060|dbj|BAG95989.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 488

 Score =  626 bits (1614), Expect = e-176
 Identities = 297/395 (75%), Positives = 336/395 (85%)
 Frame = -2

Query: 1790 VLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSQCPWDEDLKYATAVCEQID 1611
            VL+SGGVDSSVALRLLHAAGH CTAFYLKIWFQEDF NFWS+CPWD+DLKYA AVC++ID
Sbjct: 82   VLVSGGVDSSVALRLLHAAGHRCTAFYLKIWFQEDFRNFWSECPWDDDLKYAQAVCDKID 141

Query: 1610 VPLEIVHLSDEYWSNVVSHIIAEYRCGRTPNPDVLCNTRIKFGAFLEAVADMDFDYVASG 1431
            VPLE+VHLSDEYW++VVSHII EYR GRTPNPDVLCNTRIKFGAFLEA+ ++ FDY+ASG
Sbjct: 142  VPLEVVHLSDEYWNHVVSHIINEYRSGRTPNPDVLCNTRIKFGAFLEAIENLGFDYIASG 201

Query: 1430 HYAHVIHPSFDQRDMPSVLRLSQDMIKDQTYXXXXXXXXXXXXXXXXLGCIQKDEVRRLA 1251
            HYAHV+HPS D  + PSVL+LS+D +KDQTY                LGCI KDEVRRLA
Sbjct: 202  HYAHVVHPSPDDVEGPSVLQLSKDKVKDQTYFLSHLSQTQLRRLLFPLGCITKDEVRRLA 261

Query: 1250 SLMELPNKDRKDSQGICFLGKVKFSEFVAKHIGEMEGILLEAETGDYLGKHRGFWFYTIG 1071
            + M+LPN+DRKDSQGICFLGKVKFSEFV + IGEMEG+LLEAETGDYLG HRGFWFYTIG
Sbjct: 262  AQMDLPNQDRKDSQGICFLGKVKFSEFVERQIGEMEGVLLEAETGDYLGTHRGFWFYTIG 321

Query: 1070 QRQGLRLPGGPWYVVEKDVQNNVVFVSRNYFSIDKRRRTFRVGSLKWVSGSPPDRNSQLR 891
            QRQGLRLPGGPWYVVEK VQNNVVFVSRNY+S+DKRRRTFRVGSL W S S P  N QL+
Sbjct: 322  QRQGLRLPGGPWYVVEKGVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFSNSGPTNNEQLK 381

Query: 890  CKVRHGPGFYSCSVTIEPSKHDDEEVAVVHLNEDDQGLAAGQFAAFYNDEICIGSGVILD 711
            CKVRH P F+ C+VT E +  +   + VV L+EDDQGLAAGQFAAFY D +C+GSG+ILD
Sbjct: 382  CKVRHSPEFHDCTVTQEQTS-EHGVILVVRLSEDDQGLAAGQFAAFYRDNLCLGSGIILD 440

Query: 710  SWDGKCFPICAEALEIAKMEDKSKLGKPVRIMNLD 606
            SWD   FP+CA ALEIA+MEDKS+LGKPV+IMNL+
Sbjct: 441  SWDEMNFPVCARALEIARMEDKSRLGKPVKIMNLE 475