BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00021124
         (603 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   158   1e-48
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          155   2e-47
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   155   3e-47
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc...   140   6e-47
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc...   138   2e-46
gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Jap...   138   2e-46
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc...   138   3e-46
gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subc...   138   3e-46
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc...   138   3e-46
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa...   138   3e-46
gb|AAT69624.1| putative polyprotein [Oryza sativa Japonica Group]     138   3e-46
gb|AAP54028.1| retrotransposon protein, putative, Ty1-copia subc...   138   3e-46
gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subc...   138   3e-46
gb|AAL31653.1|AC079179_8 Putative polyprotein from transposon TN...   138   3e-46
gb|ABG21864.1| retrotransposon protein, putative, Ty1-copia subc...   138   3e-46
gb|AAP50927.1| putative polyprotein [Oryza sativa Japonica Group...   138   3e-46
gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subc...   138   3e-46
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc...   138   4e-46
gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subc...   138   4e-46
dbj|BAB03249.1| polyprotein [Oryza sativa]                            138   4e-46

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  158 bits (400), Expect(2) = 1e-48
 Identities = 77/152 (50%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           +KLNV +   + +     S   +ES  LWHG+LGHVN  T+R++I+LN IP   ++ N K
Sbjct: 445 WKLNVMTIIKSNMNKASTSTYMLESSNLWHGRLGHVNYDTLRRLINLNHIPTFQINSNHK 504

Query: 421 CEICVK-KQTRKPFKSFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYTY 245
           CE CV+ K TR  F+S  RN+  L+LIHSD+CD     TRGG++YF+TF+DD ++YCY Y
Sbjct: 505 CETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVY 564

Query: 244 ILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           +LK+KDE + KF +YK E ENQ +K+IK+LRS
Sbjct: 565 LLKSKDEAIEKFVLYKTEVENQLNKKIKVLRS 596



 Score = 61.2 bits (147), Expect(2) = 1e-48
 Identities = 32/49 (65%), Positives = 36/49 (73%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY S  + + C +HGIIHE  APYSP SNGVAERKNRTL  M+NA
Sbjct: 597 DRGGEYESPFVDI-CAQHGIIHETTAPYSPQSNGVAERKNRTLKEMMNA 644


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  155 bits (392), Expect(2) = 2e-47
 Identities = 79/154 (51%), Positives = 107/154 (69%), Gaps = 3/154 (1%)
 Frame = -3

Query: 601 FKLNVNS--PSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLN 428
           FKLNV +  P+ N        +L  ES  +WHG+LGHVN  ++RK+I++  IPN  +DL 
Sbjct: 434 FKLNVMTLKPTINNKATSSAYLL--ESSNIWHGRLGHVNFNSLRKLINMKHIPNFQIDLK 491

Query: 427 SKCEICVK-KQTRKPFKSFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCY 251
            KC+ CV+ K TR  F+   RNS  L+LIHSD+CD     TRGG++YF+TFIDD ++YCY
Sbjct: 492 HKCKTCVEAKLTRSSFQIIQRNSEPLDLIHSDICDFKSIQTRGGNKYFITFIDDCTKYCY 551

Query: 250 TYILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
            Y+LK+KDE L+KF +YK E ENQ +++IK LRS
Sbjct: 552 VYLLKSKDEALDKFILYKNEVENQLNRKIKELRS 585



 Score = 60.5 bits (145), Expect(2) = 2e-47
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY    ++L CE+ GIIH+V APYSP SNG+AERKNRTL  M+NA
Sbjct: 586 DRGGEYVVPFMSL-CEQSGIIHQVTAPYSPQSNGIAERKNRTLKEMMNA 633


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  155 bits (392), Expect(2) = 3e-47
 Identities = 76/152 (50%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           +KLNV +   + +     S   +ES  LWHG+L HVN  T+R++I+LN IP   ++ N K
Sbjct: 445 WKLNVMTIIKSNMNKASTSTYMLESSNLWHGRLRHVNYDTLRRLINLNHIPTFQINSNHK 504

Query: 421 CEICVK-KQTRKPFKSFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYTY 245
           CE CV+ K TR  F+S  RN+  L+LIHSD+CD     TRGG++YF+TF+DD ++YCY Y
Sbjct: 505 CETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVY 564

Query: 244 ILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           +LK+KDE + KF +YK E ENQ +K+IK+LRS
Sbjct: 565 LLKSKDEAIEKFVLYKTEVENQLNKKIKVLRS 596



 Score = 59.7 bits (143), Expect(2) = 3e-47
 Identities = 31/49 (63%), Positives = 35/49 (71%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY S  + + C +HGIIHE   PYSP SNGVAERKNRTL  M+NA
Sbjct: 597 DRGGEYESPFVDI-CAQHGIIHETTTPYSPQSNGVAERKNRTLKEMMNA 644


>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1303

 Score =  140 bits (354), Expect(2) = 6e-47
 Identities = 72/153 (47%), Positives = 101/153 (66%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           F LN    + NA+      +  ++   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 520 FSLNDMCNNHNAVNH----ISEIDESNVWHSRLCHVNFGCLTRLANMSLIPKFTLVKGSK 575

Query: 421 CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
           C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 576 CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 635

Query: 247 YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 636 YLLKTKDEALHFFKIYKAEVENQLERKIKRLRS 668



 Score = 73.2 bits (178), Expect(2) = 6e-47
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 669 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 717


>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1287

 Score =  138 bits (347), Expect(2) = 2e-46
 Identities = 67/130 (51%), Positives = 90/130 (69%), Gaps = 2/130 (1%)
 Frame = -3

Query: 532 ESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSKCEICVK-KQTRKPFKSFA-RNSV 359
           +   +WH +L H+N G + ++  + LIP   +   SKC  CV+ KQ RKP K+   RN  
Sbjct: 390 DEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLA 449

Query: 358 LLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYTYILKTKDEVLNKFKVYKAEAENQ 179
            LEL+HSD+C+ N   T+GG RYF+TFIDD +R+CY Y+LKTKDE L+ FK+YKAE ENQ
Sbjct: 450 PLELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQ 509

Query: 178 *DKRIKILRS 149
            D++IK LRS
Sbjct: 510 LDRKIKRLRS 519



 Score = 73.9 bits (180), Expect(2) = 2e-46
 Identities = 34/49 (69%), Positives = 40/49 (81%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G E+ SN+  LFCEEHGIIHE+  PYSP SNG+AERKNRTL ++VNA
Sbjct: 520 DRGGEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNA 568


>gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Japonica Group]
           gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1274

 Score =  138 bits (347), Expect(2) = 2e-46
 Identities = 67/130 (51%), Positives = 90/130 (69%), Gaps = 2/130 (1%)
 Frame = -3

Query: 532 ESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSKCEICVK-KQTRKPFKSFA-RNSV 359
           +   +WH +L H+N G + ++  + LIP   +   SKC  CV+ KQ RKP K+   RN  
Sbjct: 429 DEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLA 488

Query: 358 LLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYTYILKTKDEVLNKFKVYKAEAENQ 179
            LEL+HSD+C+ N   T+GG RYF+TFIDD +R+CY Y+LKTKDE L+ FK+YKAE ENQ
Sbjct: 489 PLELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQ 548

Query: 178 *DKRIKILRS 149
            D++IK LRS
Sbjct: 549 LDRKIKRLRS 558



 Score = 73.9 bits (180), Expect(2) = 2e-46
 Identities = 34/49 (69%), Positives = 40/49 (81%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G E+ SN+  LFCEEHGIIHE+  PYSP SNG+AERKNRTL ++VNA
Sbjct: 559 DHGGEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNA 607


>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1479

 Score =  138 bits (348), Expect(2) = 3e-46
 Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601  FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
            F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 586  FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSK 641

Query: 421  CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
            C  CV+ KQ RKP K S ARN   LELIHSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 642  CHTCVQSKQPRKPHKASEARNLAPLELIHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 701

Query: 247  YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
            Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 702  YLLKTKDEALHFFKIYKAEVENQLERKIKRLRS 734



 Score = 73.2 bits (178), Expect(2) = 3e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 735 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 783


>gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1452

 Score =  138 bits (348), Expect(2) = 3e-46
 Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601  FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
            F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 563  FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMMRLANMSLIPKFTLVKGSK 618

Query: 421  CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
            C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 619  CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 678

Query: 247  YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
            Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 679  YLLKTKDEALHYFKIYKAEVENQLERKIKRLRS 711



 Score = 73.2 bits (178), Expect(2) = 3e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 712 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 760


>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1448

 Score =  138 bits (348), Expect(2) = 3e-46
 Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601  FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
            F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 555  FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSK 610

Query: 421  CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
            C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 611  CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 670

Query: 247  YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
            Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 671  YLLKTKDEALHYFKIYKAEVENQLERKIKRLRS 703



 Score = 73.2 bits (178), Expect(2) = 3e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 704 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 752


>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1408

 Score =  138 bits (348), Expect(2) = 3e-46
 Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 515 FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSK 570

Query: 421 CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
           C  CV+ KQ RKP K S ARN   LELIHSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 571 CHTCVQSKQPRKPHKASEARNLAPLELIHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 630

Query: 247 YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 631 YLLKTKDEALHFFKIYKAEVENQLERKIKRLRS 663



 Score = 73.2 bits (178), Expect(2) = 3e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 664 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 712


>gb|AAT69624.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1401

 Score =  138 bits (348), Expect(2) = 3e-46
 Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 545 FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSK 600

Query: 421 CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
           C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 601 CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 660

Query: 247 YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 661 YLLKTKDEALHYFKIYKAEVENQLERKIKRLRS 693



 Score = 73.2 bits (178), Expect(2) = 3e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 694 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 742


>gb|AAP54028.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1361

 Score =  138 bits (348), Expect(2) = 3e-46
 Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 542 FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSK 597

Query: 421 CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
           C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 598 CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 657

Query: 247 YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 658 YLLKTKDEALHYFKIYKAEVENQLERKIKRLRS 690



 Score = 73.2 bits (178), Expect(2) = 3e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 691 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 739


>gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1357

 Score =  138 bits (348), Expect(2) = 3e-46
 Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 464 FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMMRLANMSLIPKFTLVKGSK 519

Query: 421 CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
           C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 520 CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 579

Query: 247 YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 580 YLLKTKDEALHYFKIYKAEVENQLERKIKRLRS 612



 Score = 73.2 bits (178), Expect(2) = 3e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 613 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 661


>gb|AAL31653.1|AC079179_8 Putative polyprotein from transposon TNT [Oryza sativa]
           gi|31429907|gb|AAP51896.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1342

 Score =  138 bits (348), Expect(2) = 3e-46
 Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 449 FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMMRLANMSLIPKFTLVKGSK 504

Query: 421 CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
           C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 505 CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 564

Query: 247 YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 565 YLLKTKDEALHYFKIYKAEVENQLERKIKRLRS 597



 Score = 73.2 bits (178), Expect(2) = 3e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 598 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 646


>gb|ABG21864.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1297

 Score =  138 bits (348), Expect(2) = 3e-46
 Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 477 FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSK 532

Query: 421 CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
           C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 533 CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 592

Query: 247 YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 593 YLLKTKDEALHYFKIYKAEVENQLERKIKRLRS 625



 Score = 73.2 bits (178), Expect(2) = 3e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 626 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 674


>gb|AAP50927.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108708705|gb|ABF96500.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1240

 Score =  138 bits (348), Expect(2) = 3e-46
 Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 375 FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMMRLANMSLIPKFTLVKGSK 430

Query: 421 CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
           C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 431 CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 490

Query: 247 YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 491 YLLKTKDEALHYFKIYKAEVENQLERKIKRLRS 523



 Score = 73.2 bits (178), Expect(2) = 3e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 524 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 572


>gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1186

 Score =  138 bits (348), Expect(2) = 3e-46
 Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 551 FSLNDMCNNHNAVNH----ISKNDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSK 606

Query: 421 CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
           C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 607 CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 666

Query: 247 YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 667 YLLKTKDEALHYFKIYKAEVENQLERKIKRLRS 699



 Score = 73.2 bits (178), Expect(2) = 3e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 700 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 748


>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1298

 Score =  138 bits (347), Expect(2) = 4e-46
 Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 520 FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSK 575

Query: 421 CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
           C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 576 CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 635

Query: 247 YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 636 YLLKTKDEALHFFKIYKAEVENQLERKIKRLRS 668



 Score = 73.2 bits (178), Expect(2) = 4e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 669 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 717


>gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1287

 Score =  138 bits (347), Expect(2) = 4e-46
 Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 520 FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSK 575

Query: 421 CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
           C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 576 CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 635

Query: 247 YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 636 YLLKTKDEALHFFKIYKAEVENQLERKIKRLRS 668



 Score = 73.2 bits (178), Expect(2) = 4e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 669 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 717


>dbj|BAB03249.1| polyprotein [Oryza sativa]
          Length = 1268

 Score =  138 bits (347), Expect(2) = 4e-46
 Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = -3

Query: 601 FKLNVNSPSFNAITXXXXSVLNVESCGLWHGQLGHVNLGTIRKMIDLNLIPNVGVDLNSK 422
           F LN    + NA+      +   +   +WH +L HVN G + ++ +++LIP   +   SK
Sbjct: 375 FSLNDMCNNHNAVNH----ISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSK 430

Query: 421 CEICVK-KQTRKPFK-SFARNSVLLELIHSDVCDSNRGPTRGGSRYFVTFIDDYSRYCYT 248
           C  CV+ KQ RKP K S ARN   LEL+HSD+C+ N   T+GG +YF+T IDD +R+CY 
Sbjct: 431 CHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYV 490

Query: 247 YILKTKDEVLNKFKVYKAEAENQ*DKRIKILRS 149
           Y+LKTKDE L+ FK+YKAE ENQ +++IK LRS
Sbjct: 491 YLLKTKDEALHFFKIYKAEVENQLERKIKRLRS 523



 Score = 73.2 bits (178), Expect(2) = 4e-46
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = -2

Query: 149 D*GKEYTSNKLALFCEEHGIIHEVNAPYSP*SNGVAERKNRTLINMVNA 3
           D G EY SN+ A FCEE GIIHE+  PYSP SNGVAERKNRTL  MVNA
Sbjct: 524 DRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNA 572