BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00020831
         (1137 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   458   e-126
ref|XP_004977156.1| PREDICTED: tRNA pseudouridine synthase-like ...   456   e-126
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   455   e-125
ref|NP_001146958.1| pseudouridylate synthase [Zea mays] gi|19560...   455   e-125
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like ...   454   e-125
ref|XP_002441964.1| hypothetical protein SORBIDRAFT_08g005650 [S...   452   e-124
gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [...   450   e-124
ref|XP_006663893.1| PREDICTED: tRNA pseudouridine synthase-like ...   449   e-123
ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like ...   449   e-123
ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik...   448   e-123
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   447   e-123
ref|XP_003578802.1| PREDICTED: tRNA pseudouridine synthase A-lik...   446   e-123
gb|EEC68990.1| hypothetical protein OsI_37759 [Oryza sativa Indi...   445   e-122
ref|NP_001066352.1| Os12g0194800 [Oryza sativa Japonica Group] g...   445   e-122
gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [...   444   e-122
ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   442   e-122
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]      439   e-120
ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   437   e-120
gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus...   437   e-120
ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Popu...   437   e-120

>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
            gi|297739525|emb|CBI29707.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  458 bits (1178), Expect = e-126
 Identities = 239/356 (67%), Positives = 274/356 (76%), Gaps = 6/356 (1%)
 Frame = +1

Query: 88   PAKPSKSSRPI-----EEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSPTV 252
            P +PSK +R       E+ +   S  M   P   QRYLVAVEY+GTRFSGSQ+Q N  TV
Sbjct: 29   PQRPSKIARTDDLSDGEQQDSVASKTMTQNPR-VQRYLVAVEYIGTRFSGSQQQLNCRTV 87

Query: 253  AGALEEAFHKFIGQPVSIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGVVK 432
            AGAL+EAFHKFIGQPVSI+ SSRTDAGVHALSNVCHVDVERISK++PGEVLPPHEP VV+
Sbjct: 88   AGALQEAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVR 147

Query: 433  RALNHFLHKNEGDMSVIDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWHVP 612
            RA+NHFL KNEGD+ VIDVRCVP DFHARYKA ERTYFYR+LSGP+ LS+F+KDRAWHVP
Sbjct: 148  RAVNHFLQKNEGDVMVIDVRCVPPDFHARYKARERTYFYRLLSGPEPLSSFEKDRAWHVP 207

Query: 613  EELDLPAMKKACSILVGHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFPXXXXXXX 792
            E+LDL AM+KAC +LVG HDFSSFRA GCQA SPIRTLDEL V+EV+  PYFP       
Sbjct: 208  EDLDLLAMQKACRVLVGCHDFSSFRAAGCQAKSPIRTLDELCVSEVLPTPYFPSITERAQ 267

Query: 793  XXXNSD-LLLCADKSEYESSTPGLVEFHNDAGSFTAKSSIEFGQRARHRCYVITARARSF 969
                 +  L C++ +E   S P     H+    F       FG R RHRC+++TARARSF
Sbjct: 268  NNFTEENPLACSNNAEVPDS-PSTAN-HDRLDGFNGAGQ-GFGVRRRHRCFLVTARARSF 324

Query: 970  LYHQVRLMVGVLKSVGTGNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDLP 1137
            LYHQVRL+VGV+K VGTG+L  SDVERIL+AKTVTAAS +APACGLYLGNV YDLP
Sbjct: 325  LYHQVRLLVGVIKCVGTGDLTVSDVERILNAKTVTAASPMAPACGLYLGNVNYDLP 380


>ref|XP_004977156.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Setaria italica]
          Length = 385

 Score =  456 bits (1173), Expect = e-126
 Identities = 236/381 (61%), Positives = 275/381 (72%), Gaps = 14/381 (3%)
 Frame = +1

Query: 34   PTASXXXXXXXXXXXXTEPAKPSKSSRPIEE--------------DEEGRSPLMNPPPGG 171
            P AS            T PAK  +SS P +               + E  + + NP    
Sbjct: 6    PAASAKRPCDPSLADPTPPAKLQRSSDPPDPAPDGITGGGEAAGVESEAMAGVRNPR--- 62

Query: 172  AQRYLVAVEYVGTRFSGSQKQPNSPTVAGALEEAFHKFIGQPVSIYFSSRTDAGVHALSN 351
            AQRYLVAVEYVGTRFSGSQ+QPN  TV G LEEAFHKFIGQPVSI+ SSRTDAGVHALSN
Sbjct: 63   AQRYLVAVEYVGTRFSGSQQQPNQRTVVGVLEEAFHKFIGQPVSIFCSSRTDAGVHALSN 122

Query: 352  VCHVDVERISKKRPGEVLPPHEPGVVKRALNHFLHKNEGDMSVIDVRCVPADFHARYKAL 531
            +CHVDVERISK++PGEVL PHEPGVVKRA+NHFL +NEGD+ V DVRCV  DFHARYKAL
Sbjct: 123  ICHVDVERISKRKPGEVLTPHEPGVVKRAVNHFLQRNEGDIMVTDVRCVAPDFHARYKAL 182

Query: 532  ERTYFYRILSGPDSLSAFDKDRAWHVPEELDLPAMKKACSILVGHHDFSSFRATGCQANS 711
            ERTY YR+LSGP+S S F+K+ AWH+ E+LD+ AMKKACSILVGHHDFSSFRA GCQANS
Sbjct: 183  ERTYHYRLLSGPESTSVFEKNSAWHISEDLDIQAMKKACSILVGHHDFSSFRAAGCQANS 242

Query: 712  PIRTLDELHVAEVVSYPYFPXXXXXXXXXXNSDLLLCADKSEYESSTPGLVEFHNDAGSF 891
            P+RTLDEL+V EV  + +FP          +   L+ +     E S     +    +G  
Sbjct: 243  PMRTLDELNVTEVFPFMFFPSSIERSEMESSDGSLIYSRTPALEPSRKESDDSCTSSGKS 302

Query: 892  TAKSSIEFGQRARHRCYVITARARSFLYHQVRLMVGVLKSVGTGNLDASDVERILDAKTV 1071
             +++  EFG R RHRC+V+TARARSFLYHQVRLMVG+LKSVGTG+L  +DVERIL+AK V
Sbjct: 303  ESENGKEFGSRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVERILNAKKV 362

Query: 1072 TAASAIAPACGLYLGNVKYDL 1134
            TAA  +APACGLYL NVKYDL
Sbjct: 363  TAAPPMAPACGLYLANVKYDL 383


>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca subsp.
            vesca]
          Length = 350

 Score =  455 bits (1170), Expect = e-125
 Identities = 230/350 (65%), Positives = 269/350 (76%)
 Frame = +1

Query: 88   PAKPSKSSRPIEEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSPTVAGALE 267
            P +PSK S+   E+ E  S      P G QRYL+A+EY+GTRFSGSQ+Q N  TV G LE
Sbjct: 16   PKRPSKISKTTSEEAEAESM---SKPQGIQRYLIAIEYIGTRFSGSQQQSNCRTVVGVLE 72

Query: 268  EAFHKFIGQPVSIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGVVKRALNH 447
            EAF KFIGQPVSI+ SSRTDAGVHALSNVCHVD+ERISK++PGEVLPPHEP VV+RA+NH
Sbjct: 73   EAFRKFIGQPVSIFCSSRTDAGVHALSNVCHVDIERISKRKPGEVLPPHEPIVVQRAVNH 132

Query: 448  FLHKNEGDMSVIDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWHVPEELDL 627
            FL KNEGD+ V+DVR VPADFHAR+KA ERTYFYR+LSGP+ LS F+KDRAWH+PEELD+
Sbjct: 133  FLQKNEGDVMVVDVRSVPADFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHIPEELDV 192

Query: 628  PAMKKACSILVGHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFPXXXXXXXXXXNS 807
             AM++AC ILVGHHDFSSFRA GCQA SPIRTLDEL+V+EVVS P FP            
Sbjct: 193  LAMQEACKILVGHHDFSSFRAAGCQAKSPIRTLDELNVSEVVSSPNFPTIAERTRNLVQK 252

Query: 808  DLLLCADKSEYESSTPGLVEFHNDAGSFTAKSSIEFGQRARHRCYVITARARSFLYHQVR 987
            D + C +  E +  +           SF   +   FG R +HRC V+TARAR+FLYHQVR
Sbjct: 253  D-IQCTNNPEADCHS-----------SFNGGTDQGFGLRKKHRCIVVTARARAFLYHQVR 300

Query: 988  LMVGVLKSVGTGNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDLP 1137
            L+VGVLK VGTG+L   DVERIL+AKTVTAAS +APACGLYLG+V+YDLP
Sbjct: 301  LLVGVLKCVGTGDLKIPDVERILNAKTVTAASPMAPACGLYLGHVRYDLP 350


>ref|NP_001146958.1| pseudouridylate synthase [Zea mays] gi|195605848|gb|ACG24754.1|
            pseudouridylate synthase [Zea mays]
          Length = 386

 Score =  455 bits (1170), Expect = e-125
 Identities = 229/356 (64%), Positives = 276/356 (77%), Gaps = 5/356 (1%)
 Frame = +1

Query: 82   TEPAKPSKSSRP-----IEEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSP 246
            +EP++P+ + +P       E+ E  +   NP    AQRYLVAVEY+GTRFSGSQKQPN  
Sbjct: 32   SEPSEPTPAGKPNGGAATGEESEMMAGARNPR---AQRYLVAVEYIGTRFSGSQKQPNQR 88

Query: 247  TVAGALEEAFHKFIGQPVSIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGV 426
            TV G LEEAFH+FIGQPVSI FSSRTDAGVHALSNVCHVDVERISK++PGEVL PHEPGV
Sbjct: 89   TVTGVLEEAFHRFIGQPVSIIFSSRTDAGVHALSNVCHVDVERISKRKPGEVLTPHEPGV 148

Query: 427  VKRALNHFLHKNEGDMSVIDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWH 606
            VKRA+NHFL K+EGD+ V DV CV  DFHARYK+LERTY YR+L+GP+S S F+K+  WH
Sbjct: 149  VKRAVNHFLLKSEGDIMVTDVCCVAPDFHARYKSLERTYHYRLLAGPESTSVFEKNSVWH 208

Query: 607  VPEELDLPAMKKACSILVGHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFPXXXXX 786
            + E+LD+ +MKKACSILVGHHDFSSFRA GCQANSP+RTLDEL V EV  + +FP     
Sbjct: 209  ISEDLDIQSMKKACSILVGHHDFSSFRAAGCQANSPVRTLDELSVTEVFPFMFFPSSVER 268

Query: 787  XXXXXNSDLLLCADKSEYESSTPGLVEFHNDAGSFTAKSSIEFGQRARHRCYVITARARS 966
                 ++  L+ + K + ESS  G       +     ++  +FG+R+RHRC+V+TARARS
Sbjct: 269  SELELSNVSLVYSRKPDMESSGKGSDGSCTSSVKSDFENGKDFGKRSRHRCFVVTARARS 328

Query: 967  FLYHQVRLMVGVLKSVGTGNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDL 1134
            FLYHQVRLMVG+LKSVGTG+L  +DVERILDAKTVTAA ++AP+CGLYL NVKYDL
Sbjct: 329  FLYHQVRLMVGLLKSVGTGDLTTADVERILDAKTVTAAPSMAPSCGLYLANVKYDL 384


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 369

 Score =  454 bits (1169), Expect = e-125
 Identities = 235/360 (65%), Positives = 273/360 (75%), Gaps = 8/360 (2%)
 Frame = +1

Query: 82   TEPAKPSKSSRP----IEEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSPT 249
            + P+K SK   P    I+E+EEG S     P  G QRYLVA+EY+GT FSGSQKQ N  T
Sbjct: 17   SRPSKISKIEYPSDSDIDEEEEGMS---QNPRNGIQRYLVAIEYIGTLFSGSQKQLNVRT 73

Query: 250  VAGALEEAFHKFIGQPVSIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGVV 429
            V GALEEAF KF+GQPVS+  SSRTDAGVHALSNVCHVD++RISK+RPGEVLPPHEP VV
Sbjct: 74   VVGALEEAFSKFVGQPVSVSCSSRTDAGVHALSNVCHVDIQRISKRRPGEVLPPHEPAVV 133

Query: 430  KRALNHFLHKNEGDMSVIDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWHV 609
             RA+NHFL K++ D+ VIDVRCVP+DFHAR+KA ERTYFYR+LSGP+ LS F+KDRAWHV
Sbjct: 134  GRAVNHFLQKHDSDLMVIDVRCVPSDFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHV 193

Query: 610  PEELDLPAMKKACSILVGHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFP-XXXXX 786
            PEEL LPAM++AC +LVG HDFSSFRA GCQA SPIRTLDEL V EV+  PYFP      
Sbjct: 194  PEELSLPAMQEACRVLVGCHDFSSFRAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDRE 253

Query: 787  XXXXXNSDLLLCADKSEYE---SSTPGLVEFHNDAGSFTAKSSIEFGQRARHRCYVITAR 957
                 + DL  C++ +E +    S P + +        T+     FG+R RHRC V+TAR
Sbjct: 254  QHNKVSGDLRSCSNNTETDIPPISNPSIDKV------ITSSQDAGFGKRRRHRCLVVTAR 307

Query: 958  ARSFLYHQVRLMVGVLKSVGTGNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDLP 1137
            ARSFLYHQVRL+VGVLK+ GTGNL   DVERIL+AKTVTAAS +APACGLYLG VKYDLP
Sbjct: 308  ARSFLYHQVRLLVGVLKAAGTGNLTIPDVERILNAKTVTAASPMAPACGLYLGEVKYDLP 367


>ref|XP_002441964.1| hypothetical protein SORBIDRAFT_08g005650 [Sorghum bicolor]
            gi|241942657|gb|EES15802.1| hypothetical protein
            SORBIDRAFT_08g005650 [Sorghum bicolor]
          Length = 387

 Score =  452 bits (1162), Expect = e-124
 Identities = 231/356 (64%), Positives = 273/356 (76%), Gaps = 5/356 (1%)
 Frame = +1

Query: 82   TEPAKPSKSSRP-----IEEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSP 246
            +EP+ P+ + +P       E+ E  +   NP    AQRYLVAVEY+GTRFSGSQ+QPN  
Sbjct: 33   SEPSDPTPAVKPNGGAETGEESEVMAGARNPR---AQRYLVAVEYIGTRFSGSQQQPNQR 89

Query: 247  TVAGALEEAFHKFIGQPVSIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGV 426
            TV G LEEAFH+FIGQPVSI+ SSRTDAGVHALSNVCHVDVERISK++PGEVL PHEPGV
Sbjct: 90   TVVGVLEEAFHRFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLTPHEPGV 149

Query: 427  VKRALNHFLHKNEGDMSVIDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWH 606
            VKRA+NHFL KNEGD+ V DVRCV  DFHARYKALERTY YR+LSGP+S S F+ + AWH
Sbjct: 150  VKRAVNHFLLKNEGDIMVTDVRCVAPDFHARYKALERTYHYRLLSGPESTSVFETNSAWH 209

Query: 607  VPEELDLPAMKKACSILVGHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFPXXXXX 786
            + E+LD+ AMKKACSILVGHHDFSSFRA GCQANSP+RTLDEL V EV  + +FP     
Sbjct: 210  ISEDLDIQAMKKACSILVGHHDFSSFRAAGCQANSPMRTLDELSVTEVFPFMFFPSSVER 269

Query: 787  XXXXXNSDLLLCADKSEYESSTPGLVEFHNDAGSFTAKSSIEFGQRARHRCYVITARARS 966
                 ++  L+ +   + ESS  G       +     ++  +FG+R+RHRC+V+TARARS
Sbjct: 270  SQLESSNGSLVYSRTPDIESSGKGSDLCCTSSVKSELENGEDFGKRSRHRCFVVTARARS 329

Query: 967  FLYHQVRLMVGVLKSVGTGNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDL 1134
            FLYHQVRLMVG+LKSVGTG+L  +DVERILDAKTVTAA  +APA GLYL NVKYDL
Sbjct: 330  FLYHQVRLMVGLLKSVGTGDLTTADVERILDAKTVTAAPRMAPAYGLYLANVKYDL 385


>gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 374

 Score =  450 bits (1158), Expect = e-124
 Identities = 229/340 (67%), Positives = 266/340 (78%), Gaps = 1/340 (0%)
 Frame = +1

Query: 121  EEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSPTVAGALEEAFHKFIGQPV 300
            EED++ +   M+  P   QRYLVA+EY+GTRFSGSQ+QPN  TV G LEEAF KFIGQPV
Sbjct: 34   EEDKQQQESSMSKNPR-IQRYLVAIEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPV 92

Query: 301  SIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGVVKRALNHFLHKNEGDMSV 480
            SI+ SSRTDAGVHALSNVCHVDVERISK++PGEVLPPHEP VV+RA+NHFL K+EGD++V
Sbjct: 93   SIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKSEGDITV 152

Query: 481  IDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWHVPEELDLPAMKKACSILV 660
            IDVRCVP DFHARYKA ERTYFYR+LSG + LS F+K+RAWHVPE+LDL AM++AC +LV
Sbjct: 153  IDVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLV 212

Query: 661  GHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFPXXXXXXXXXXNS-DLLLCADKSE 837
            GHHDFSSFRA GCQA SPIRTLDELHV+E    PYFP          ++ D   C+ + E
Sbjct: 213  GHHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPE 272

Query: 838  YESSTPGLVEFHNDAGSFTAKSSIEFGQRARHRCYVITARARSFLYHQVRLMVGVLKSVG 1017
             +          ++ GS    + + FG R RH CYV+TARARSFLYHQVRL+VGVLK VG
Sbjct: 273  IDLPIDSFSNSDDEVGS-NGITDLGFGIRRRHHCYVVTARARSFLYHQVRLLVGVLKCVG 331

Query: 1018 TGNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDLP 1137
            TG L  SDVERIL+AKTVTAAS +APA GLYLG VKYDLP
Sbjct: 332  TGELTTSDVERILNAKTVTAASPMAPAYGLYLGCVKYDLP 371


>ref|XP_006663893.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Oryza
            brachyantha]
          Length = 397

 Score =  449 bits (1155), Expect = e-123
 Identities = 240/391 (61%), Positives = 275/391 (70%), Gaps = 16/391 (4%)
 Frame = +1

Query: 10   PLSSSRMPPTASXXXXXXXXXXXXTEPAKPSKSSRPI----------------EEDEEGR 141
            P SS+    +AS            + PAK  +SS+P                 E  E  R
Sbjct: 6    PESSAAAADSASSKRPIGPSLAEPSPPAKVPRSSQPDPCPSPAEARGDAANGGEVAEGSR 65

Query: 142  SPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSPTVAGALEEAFHKFIGQPVSIYFSSR 321
              +       AQRYLVAVEY+GTRFSGSQ+QPN  TV G LEEAFHKFIGQPVSI+ SSR
Sbjct: 66   EEMAGAWNPRAQRYLVAVEYIGTRFSGSQQQPNQRTVVGVLEEAFHKFIGQPVSIFCSSR 125

Query: 322  TDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGVVKRALNHFLHKNEGDMSVIDVRCVP 501
            TDAGVHALSNVCHVDVERISK++PGEVLPPHEPGVVKRA+NHFL KNEGD+ V DV CV 
Sbjct: 126  TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVKRAVNHFLQKNEGDIMVTDVCCVA 185

Query: 502  ADFHARYKALERTYFYRILSGPDSLSAFDKDRAWHVPEELDLPAMKKACSILVGHHDFSS 681
             DFHARYKALERTY YR+LSG + LS F+K  AWH+ E+L++ AMKKACSILVGHHDFSS
Sbjct: 186  PDFHARYKALERTYHYRLLSGSEPLSVFEKSSAWHIAEDLNVQAMKKACSILVGHHDFSS 245

Query: 682  FRATGCQANSPIRTLDELHVAEVVSYPYFPXXXXXXXXXXNSDLLLCADKSEYESSTPGL 861
            FRA GCQANSP+RTLDEL V EV    +FP              L+ +  S  ESS  G 
Sbjct: 246  FRAAGCQANSPMRTLDELTVTEVFPSMFFPSSLERSDMEPLDGPLIYSRTSVVESSGKG- 304

Query: 862  VEFHNDAGSFTAKSSIEFGQRARHRCYVITARARSFLYHQVRLMVGVLKSVGTGNLDASD 1041
             +  N       +S  EFG+R RHRC+V+TARARSFLYHQVRLMVG+LKSVGTG+L  +D
Sbjct: 305  SDASNTTSESRCESGGEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTAD 364

Query: 1042 VERILDAKTVTAASAIAPACGLYLGNVKYDL 1134
            VERIL++KTVTAA  +APACGLYL NVKYDL
Sbjct: 365  VERILNSKTVTAAPPMAPACGLYLANVKYDL 395


>ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Solanum
            tuberosum]
          Length = 389

 Score =  449 bits (1155), Expect = e-123
 Identities = 224/339 (66%), Positives = 266/339 (78%)
 Frame = +1

Query: 121  EEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSPTVAGALEEAFHKFIGQPV 300
            EE +E  +  MNP P   QRYL+A+EY+GTRF+G+Q+QPN  TV G L+EAF KF+GQPV
Sbjct: 46   EEQKESVTRTMNPNPR-LQRYLIAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFVGQPV 104

Query: 301  SIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGVVKRALNHFLHKNEGDMSV 480
            S++ SSRTDAGVHALSNVCHVDVERISK++PG+VLPPHEP VVKRA+NHFL KNEGD+ V
Sbjct: 105  SVFCSSRTDAGVHALSNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNEGDIMV 164

Query: 481  IDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWHVPEELDLPAMKKACSILV 660
            IDVRCVPADFHARYKA ERTYFYR+LSGP+S+S+F++DRAWHVPE LDL AM+KAC+IL+
Sbjct: 165  IDVRCVPADFHARYKAQERTYFYRLLSGPESVSSFERDRAWHVPENLDLLAMQKACNILI 224

Query: 661  GHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFPXXXXXXXXXXNSDLLLCADKSEY 840
            G HDFSSFRA  CQANSPIRTLDEL+V EVVS P+FP            +    +  S+ 
Sbjct: 225  GRHDFSSFRAAACQANSPIRTLDELNVIEVVSTPFFPSISERLKSSSVMEDPTVSLGSDT 284

Query: 841  ESSTPGLVEFHNDAGSFTAKSSIEFGQRARHRCYVITARARSFLYHQVRLMVGVLKSVGT 1020
              S   L            ++  EFG R RHRC+V+TARARSFLYHQVRL+VGVLKSVG 
Sbjct: 285  NHSQISLNTNEEKLEGSNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGA 344

Query: 1021 GNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDLP 1137
            G L   DV+RIL+AK++TAA  +APACGLYLG+VKYDLP
Sbjct: 345  GVLTDPDVKRILEAKSITAAPPMAPACGLYLGHVKYDLP 383


>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 352

 Score =  448 bits (1153), Expect = e-123
 Identities = 226/350 (64%), Positives = 269/350 (76%)
 Frame = +1

Query: 88   PAKPSKSSRPIEEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSPTVAGALE 267
            P K  K++  +   +E  +  MNP PG  QRYLVAVEY+GTRF GSQ+QPN  TV GALE
Sbjct: 20   PLKIGKTTDELFHGDEEEAETMNPKPG-IQRYLVAVEYIGTRFYGSQQQPNCRTVVGALE 78

Query: 268  EAFHKFIGQPVSIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGVVKRALNH 447
            EAF KFIGQPVS++ SSRTDAGVHALSNVCHVDVERISK++PGEVLPPHEPGVV +A+NH
Sbjct: 79   EAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVHKAVNH 138

Query: 448  FLHKNEGDMSVIDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWHVPEELDL 627
            FL K+EGD++V+DVR VP DFHARYKA ERTYFYR++SGP++LS+F+KDRAWHVPE L++
Sbjct: 139  FLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALSSFEKDRAWHVPETLNI 198

Query: 628  PAMKKACSILVGHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFPXXXXXXXXXXNS 807
             AM++AC +LVGHHDFSSFRA GCQANSPIRTLDEL+V EV S PYFP          + 
Sbjct: 199  GAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVASTPYFP---------TSM 249

Query: 808  DLLLCADKSEYESSTPGLVEFHNDAGSFTAKSSIEFGQRARHRCYVITARARSFLYHQVR 987
            +      K E E   P            +    + FG R RHRC+V+TARARSFLYHQVR
Sbjct: 250  ERKQRQGKEESEIEVP-----------CSETCEVGFGIRRRHRCFVVTARARSFLYHQVR 298

Query: 988  LMVGVLKSVGTGNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDLP 1137
            LMVGVLK+VG+G+L   DV RIL+AK V++A  +APACGLYLG+VKYDLP
Sbjct: 299  LMVGVLKAVGSGDLTVGDVGRILEAKNVSSARPMAPACGLYLGHVKYDLP 348


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
            gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  447 bits (1150), Expect = e-123
 Identities = 226/354 (63%), Positives = 266/354 (75%), Gaps = 4/354 (1%)
 Frame = +1

Query: 88   PAKPSKSSRPIEEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSPTVAGALE 267
            P+K S    PI+ D +    ++  P  G QRYLVA+EY+GTRFSGSQKQ N  TV G LE
Sbjct: 21   PSKISIIEYPIDSDIDEEEEMIKNPRNGIQRYLVAIEYIGTRFSGSQKQLNVRTVVGVLE 80

Query: 268  EAFHKFIGQPVSIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGVVKRALNH 447
            EAF KF+GQPVS+  SSRT AGVHALSNVCHVD++RISK+RPGEVL PHEP VV RA+NH
Sbjct: 81   EAFSKFVGQPVSVSCSSRTVAGVHALSNVCHVDIQRISKRRPGEVLTPHEPAVVGRAVNH 140

Query: 448  FLHKNEGDMSVIDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWHVPEELDL 627
            FL K + D+ VIDVRCVP+DFHAR+KA ER YFYR+LSGP+ LS F+KDRAWHVPEEL L
Sbjct: 141  FLQKQDSDLMVIDVRCVPSDFHARFKAQERIYFYRLLSGPEPLSTFEKDRAWHVPEELSL 200

Query: 628  PAMKKACSILVGHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFP-XXXXXXXXXXN 804
            PAM++AC +LVG HDFSSFRA GCQA SPIRTLDEL V EV+  PYFP           +
Sbjct: 201  PAMQEACRVLVGFHDFSSFRAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVS 260

Query: 805  SDLLLCADKSEYE---SSTPGLVEFHNDAGSFTAKSSIEFGQRARHRCYVITARARSFLY 975
             DL  C + SE +   +S P + +         +   + FG+R RHRC V+TARAR+FLY
Sbjct: 261  GDLRSCPNNSETDIPPTSNPSIDKV------MASSQDVGFGKRRRHRCLVVTARARAFLY 314

Query: 976  HQVRLMVGVLKSVGTGNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDLP 1137
            HQVRL+VGVLK+VGTGNL   DVERIL+A+TVTAAS +APACGLYLG VKYDLP
Sbjct: 315  HQVRLLVGVLKAVGTGNLTIPDVERILNARTVTAASPMAPACGLYLGEVKYDLP 368


>ref|XP_003578802.1| PREDICTED: tRNA pseudouridine synthase A-like [Brachypodium
            distachyon]
          Length = 386

 Score =  446 bits (1147), Expect = e-123
 Identities = 229/366 (62%), Positives = 266/366 (72%), Gaps = 16/366 (4%)
 Frame = +1

Query: 85   EPAKPSKSSRPIEEDEEGRSPLMNPPPGGA----------------QRYLVAVEYVGTRF 216
            +P+ PSK  R    D    SP   P   GA                QRYLVAVEY GTRF
Sbjct: 22   DPSLPSKLQRSSHPDI---SPAEKPEGVGAAGPESEAMAAARVPRGQRYLVAVEYAGTRF 78

Query: 217  SGSQKQPNSPTVAGALEEAFHKFIGQPVSIYFSSRTDAGVHALSNVCHVDVERISKKRPG 396
             GSQ+QP+  TV G LEEAFHKF+GQPVS++ SSRTDAGVHALSNVCHVDVERISK++PG
Sbjct: 79   CGSQQQPDQRTVVGVLEEAFHKFVGQPVSVFCSSRTDAGVHALSNVCHVDVERISKRKPG 138

Query: 397  EVLPPHEPGVVKRALNHFLHKNEGDMSVIDVRCVPADFHARYKALERTYFYRILSGPDSL 576
            EVLPPH+PGVVKRA+NHFL KNEGD+ V DVRCVP DFHARYKALERTY YRILSGP+  
Sbjct: 139  EVLPPHDPGVVKRAVNHFLQKNEGDIMVTDVRCVPPDFHARYKALERTYHYRILSGPERQ 198

Query: 577  SAFDKDRAWHVPEELDLPAMKKACSILVGHHDFSSFRATGCQANSPIRTLDELHVAEVVS 756
            S F+K+ AWH+PE+L++ AMKKAC +LVGHHDFSSFRATGCQA SP+RTLDEL V EV  
Sbjct: 199  SVFEKNSAWHIPEDLNIQAMKKACDLLVGHHDFSSFRATGCQAKSPVRTLDELTVTEVFP 258

Query: 757  YPYFPXXXXXXXXXXNSDLLLCADKSEYESSTPGLVEFHNDAGSFTAKSSIEFGQRARHR 936
            + +FP              L+ +  S   +S  G       +G   +++  EFG+R RHR
Sbjct: 259  FMFFPSSVERSEMESPDGSLVYSRTSLMRASAEGSDAPSTASGKSVSENGQEFGKRLRHR 318

Query: 937  CYVITARARSFLYHQVRLMVGVLKSVGTGNLDASDVERILDAKTVTAASAIAPACGLYLG 1116
            C+V+TARARSFLYHQVRLMVG+LKSVG G+L  +DVERILDAK VTAA  +APA GLYL 
Sbjct: 319  CFVVTARARSFLYHQVRLMVGLLKSVGIGDLTTADVERILDAKAVTAAPPMAPASGLYLA 378

Query: 1117 NVKYDL 1134
            NVKYDL
Sbjct: 379  NVKYDL 384


>gb|EEC68990.1| hypothetical protein OsI_37759 [Oryza sativa Indica Group]
          Length = 391

 Score =  445 bits (1144), Expect = e-122
 Identities = 228/325 (70%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
 Frame = +1

Query: 172  AQRYLVAVEYVGTRFSGSQKQPNSPTVAGALEEAFHKFIGQPVSIYFSSRTDAGVHALSN 351
            AQRYLVAVEYVGTRFSGSQ+Q N  TV G LEEAFHKFIGQPVSI+ SSRTD GVHALSN
Sbjct: 70   AQRYLVAVEYVGTRFSGSQQQLNQRTVVGVLEEAFHKFIGQPVSIFCSSRTDTGVHALSN 129

Query: 352  VCHVDVERISKKRPGEVLPPHEPGVVKRALNHFLHKNEGDMSVIDVRCVPADFHARYKAL 531
            VCHVDVERISK++PGE+LPPHEPGVVKRA+NHFL KNEGD+ V DVRCV  DFHARYKAL
Sbjct: 130  VCHVDVERISKRKPGEMLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRCVAPDFHARYKAL 189

Query: 532  ERTYFYRILSGPDSLSAFDKDRAWHVPEELDLPAMKKACSILVGHHDFSSFRATGCQANS 711
            ERTY YR+LSG + LS F+K  AWH+PE+L++ AMKKACSILVGHHDFSSFRATGCQANS
Sbjct: 190  ERTYHYRLLSGSEPLSVFEKTSAWHIPEDLNVQAMKKACSILVGHHDFSSFRATGCQANS 249

Query: 712  PIRTLDELHVAEVVSYPYFPXXXXXXXXXXNSDLLLCADKSEYESSTPGLVEFHNDAGSF 891
            P+RTLDEL V EV    +FP              L+ +  S  ESS  G     +DA S 
Sbjct: 250  PMRTLDELSVTEVFPSMFFPSSMERSEMESLDGHLVYSRTSVVESSGKG-----SDASST 304

Query: 892  TAKSSI----EFGQRARHRCYVITARARSFLYHQVRLMVGVLKSVGTGNLDASDVERILD 1059
            + +S      EFG+R RHRC+V+TARARSFLYHQVRLMVG+LKSVGTG+L   DVERIL+
Sbjct: 305  SEQSRFENGEEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTEDVERILN 364

Query: 1060 AKTVTAASAIAPACGLYLGNVKYDL 1134
             K VTAA  +APACGLYL NVKYDL
Sbjct: 365  LKAVTAAPPMAPACGLYLANVKYDL 389


>ref|NP_001066352.1| Os12g0194800 [Oryza sativa Japonica Group]
            gi|108862288|gb|ABA96079.2| tRNA pseudouridine synthase
            family protein, putative, expressed [Oryza sativa
            Japonica Group] gi|113648859|dbj|BAF29371.1| Os12g0194800
            [Oryza sativa Japonica Group]
            gi|215678805|dbj|BAG95242.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222616774|gb|EEE52906.1|
            hypothetical protein OsJ_35509 [Oryza sativa Japonica
            Group]
          Length = 391

 Score =  445 bits (1144), Expect = e-122
 Identities = 228/325 (70%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
 Frame = +1

Query: 172  AQRYLVAVEYVGTRFSGSQKQPNSPTVAGALEEAFHKFIGQPVSIYFSSRTDAGVHALSN 351
            AQRYLVAVEYVGTRFSGSQ+Q N  TV G LEEAFHKFIGQPVSI+ SSRTD GVHALSN
Sbjct: 70   AQRYLVAVEYVGTRFSGSQQQLNQRTVVGVLEEAFHKFIGQPVSIFCSSRTDTGVHALSN 129

Query: 352  VCHVDVERISKKRPGEVLPPHEPGVVKRALNHFLHKNEGDMSVIDVRCVPADFHARYKAL 531
            VCHVDVERISK++PGE+LPPHEPGVVKRA+NHFL KNEGD+ V DVRCV  DFHARYKAL
Sbjct: 130  VCHVDVERISKRKPGEMLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRCVAPDFHARYKAL 189

Query: 532  ERTYFYRILSGPDSLSAFDKDRAWHVPEELDLPAMKKACSILVGHHDFSSFRATGCQANS 711
            ERTY YR+LSG + LS F+K  AWH+PE+L++ AMKKACSILVGHHDFSSFRATGCQANS
Sbjct: 190  ERTYHYRLLSGSEPLSVFEKTSAWHIPEDLNVQAMKKACSILVGHHDFSSFRATGCQANS 249

Query: 712  PIRTLDELHVAEVVSYPYFPXXXXXXXXXXNSDLLLCADKSEYESSTPGLVEFHNDAGSF 891
            P+RTLDEL V EV    +FP              L+ +  S  ESS  G     +DA S 
Sbjct: 250  PMRTLDELSVTEVFPSMFFPSSMERSEMESLDGHLVYSRTSVVESSGKG-----SDASST 304

Query: 892  TAKSSI----EFGQRARHRCYVITARARSFLYHQVRLMVGVLKSVGTGNLDASDVERILD 1059
            + +S      EFG+R RHRC+V+TARARSFLYHQVRLMVG+LKSVGTG+L   DVERIL+
Sbjct: 305  SEQSRFENGEEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTEDVERILN 364

Query: 1060 AKTVTAASAIAPACGLYLGNVKYDL 1134
             K VTAA  +APACGLYL NVKYDL
Sbjct: 365  LKAVTAAPPMAPACGLYLANVKYDL 389


>gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
          Length = 373

 Score =  444 bits (1142), Expect = e-122
 Identities = 228/340 (67%), Positives = 266/340 (78%), Gaps = 1/340 (0%)
 Frame = +1

Query: 121  EEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSPTVAGALEEAFHKFIGQPV 300
            EED++ +   M+  P   QRYLVA+EY+GTRFSGSQ+QPN  TV G LEEAF KFIGQPV
Sbjct: 34   EEDKQQQESSMSKNPR-IQRYLVAIEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPV 92

Query: 301  SIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGVVKRALNHFLHKNEGDMSV 480
            SI+ SSRTDAGVHALSNVCHVDVERISK++PGEVLPPHEP VV+RA+NHFL ++EGD++V
Sbjct: 93   SIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFL-QSEGDITV 151

Query: 481  IDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWHVPEELDLPAMKKACSILV 660
            IDVRCVP DFHARYKA ERTYFYR+LSG + LS F+K+RAWHVPE+LDL AM++AC +LV
Sbjct: 152  IDVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLV 211

Query: 661  GHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFPXXXXXXXXXXNS-DLLLCADKSE 837
            GHHDFSSFRA GCQA SPIRTLDELHV+E    PYFP          ++ D   C+ + E
Sbjct: 212  GHHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPE 271

Query: 838  YESSTPGLVEFHNDAGSFTAKSSIEFGQRARHRCYVITARARSFLYHQVRLMVGVLKSVG 1017
             +          ++ GS    + + FG R RH CYV+TARARSFLYHQVRL+VGVLK VG
Sbjct: 272  IDLPIDSFSNSDDEVGS-NGITDLGFGIRRRHHCYVVTARARSFLYHQVRLLVGVLKCVG 330

Query: 1018 TGNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDLP 1137
            TG L  SDVERIL+AKTVTAAS +APA GLYLG VKYDLP
Sbjct: 331  TGELTTSDVERILNAKTVTAASPMAPAYGLYLGCVKYDLP 370


>ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 389

 Score =  442 bits (1138), Expect = e-122
 Identities = 222/344 (64%), Positives = 267/344 (77%), Gaps = 5/344 (1%)
 Frame = +1

Query: 121  EEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSPTVAGALEEAFHKFIGQPV 300
            EE +E  +  MNP P   QRYL+A+EY+GTRF+G+Q+QPN  TV G L+EAF KFIGQPV
Sbjct: 46   EEQKESVTRTMNPNPR-LQRYLLAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFIGQPV 104

Query: 301  SIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGVVKRALNHFLHKNEGDMSV 480
            S++ SSRTDAGVHALSNVCHVDVERISK++PG+VLPPHEP VVKRA+NHFL KN GD+ V
Sbjct: 105  SVFCSSRTDAGVHALSNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNAGDIMV 164

Query: 481  IDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWHVPEELDLPAMKKACSILV 660
            IDVRCVP DFHARYKA ERTYFYR+LSGP+ +S+F++DRAWHVPE LDL AM+KAC+IL+
Sbjct: 165  IDVRCVPDDFHARYKAQERTYFYRLLSGPEPVSSFERDRAWHVPENLDLLAMQKACNILI 224

Query: 661  GHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFPXXXXXXXXXXNSDLLLCADKSEY 840
            G HDFSSFRA  CQANSPIRTLDEL+V EVVS P+FP               +  D + Y
Sbjct: 225  GRHDFSSFRAAACQANSPIRTLDELNVIEVVSTPFFPSISERL-----KSSSVMEDPTVY 279

Query: 841  --ESSTPGLVEFHNDAGSF---TAKSSIEFGQRARHRCYVITARARSFLYHQVRLMVGVL 1005
                +    + F+ + G       ++  EFG R RHRC+V+TARARSFLYHQVRL+VGVL
Sbjct: 280  LGSDTNHSQISFNTNEGKLEGSNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVL 339

Query: 1006 KSVGTGNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDLP 1137
            KSVG G+L   DV+RIL+AK++ AA  +APACGLYLG+VKYDLP
Sbjct: 340  KSVGAGDLTDPDVKRILEAKSIAAAPPMAPACGLYLGHVKYDLP 383


>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  439 bits (1128), Expect = e-120
 Identities = 216/324 (66%), Positives = 256/324 (79%), Gaps = 3/324 (0%)
 Frame = +1

Query: 175  QRYLVAVEYVGTRFSGSQKQPNSPTVAGALEEAFHKFIGQPVSIYFSSRTDAGVHALSNV 354
            QRYLVAVEY+GTRF G QKQ    TVAG LE+AF KF+GQPVS+  SSRTDAGVHALSNV
Sbjct: 42   QRYLVAVEYIGTRFFGFQKQLTDRTVAGVLEDAFCKFVGQPVSVVCSSRTDAGVHALSNV 101

Query: 355  CHVDVERISKKRPGEVLPPHEPGVVKRALNHFLHKNEGDMSVIDVRCVPADFHARYKALE 534
            CHVD+ERISK++PGEVL PHEP VV+RA+NHFL K  GD++VIDVRCVP+DFHARYKA E
Sbjct: 102  CHVDIERISKRKPGEVLQPHEPAVVRRAVNHFLQKENGDLAVIDVRCVPSDFHARYKAQE 161

Query: 535  RTYFYRILSGPDSLSAFDKDRAWHVPEELDLPAMKKACSILVGHHDFSSFRATGCQANSP 714
            RTYFYR+LSGP++LS F+KDRAWH+PEEL+LPAM++AC +LVGHHDFSSFRA+GCQA SP
Sbjct: 162  RTYFYRLLSGPETLSTFEKDRAWHIPEELNLPAMQEACKVLVGHHDFSSFRASGCQAKSP 221

Query: 715  IRTLDELHVAEVVSYPYFPXXXXXXXXXXNSDLLLCADKSEYESSTPGLVEFHNDA---G 885
            IR+LDEL V EV   PYFP           +D L C     + S++  ++   + A    
Sbjct: 222  IRSLDELSVVEVTRSPYFPSVMDRENPINVTDDLHC-----FHSNSETVIPLGSSARIDE 276

Query: 886  SFTAKSSIEFGQRARHRCYVITARARSFLYHQVRLMVGVLKSVGTGNLDASDVERILDAK 1065
               +K  + FG+R  HRC V+TARAR+FLYHQVRL+VGVLK VGTGN+  +DVERIL+AK
Sbjct: 277  VSASKEDVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNITVTDVERILNAK 336

Query: 1066 TVTAASAIAPACGLYLGNVKYDLP 1137
            TVTA S +APACGLYLG VKYDLP
Sbjct: 337  TVTATSPMAPACGLYLGEVKYDLP 360


>ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-like isoform X1 [Cicer
            arietinum]
          Length = 374

 Score =  437 bits (1125), Expect = e-120
 Identities = 229/360 (63%), Positives = 266/360 (73%), Gaps = 10/360 (2%)
 Frame = +1

Query: 88   PAKPSKSSRPI-------EEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSP 246
            P+K SK   P        +E+EE +   MN      QRYLVA+EY+GT FSGSQKQ    
Sbjct: 20   PSKISKIEYPNPSYHDGEQEEEEEQKEGMNQHRR-IQRYLVAIEYIGTHFSGSQKQLTDR 78

Query: 247  TVAGALEEAFHKFIGQPVSIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGV 426
            TV G LEEAF KF+GQPVS+  SSRTDAGVHALSNVCHVD+ERISK++PGEVLPPHEP V
Sbjct: 79   TVVGVLEEAFCKFVGQPVSVICSSRTDAGVHALSNVCHVDIERISKRKPGEVLPPHEPVV 138

Query: 427  VKRALNHFLHKNEGDMSVIDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWH 606
            V+RA+NHFL K  GD+ VIDVRCVP+DFHARYKA ERTYFYR+LSG + LS  +KDRAWH
Sbjct: 139  VRRAVNHFLQKQNGDLMVIDVRCVPSDFHARYKAQERTYFYRLLSGSEPLSTLEKDRAWH 198

Query: 607  VPEELDLPAMKKACSILVGHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFPXXXXX 786
            VPEEL+LPAM++AC +LVGHHDFSSFRA GCQA SPIRTLDEL V EV+  PYFP     
Sbjct: 199  VPEELNLPAMQEACRVLVGHHDFSSFRAAGCQAKSPIRTLDELSVVEVIQSPYFPSVMDR 258

Query: 787  XXXXXNSDLLLCADKSEYESSTPGLVEFHNDAGSFTAKSSIE---FGQRARHRCYVITAR 957
                  +D     D     S+   ++   + A     ++S E   FG+R  HRC V+TAR
Sbjct: 259  ERQIKVAD-----DLHGCGSNAEAVIPVSSSARIDKVRASNEGVGFGKRRYHRCLVVTAR 313

Query: 958  ARSFLYHQVRLMVGVLKSVGTGNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDLP 1137
            AR+FLYHQVRL+VGVLK+VGTGNL   DVERIL+AKTVTAAS +APACGLYLG VKYDLP
Sbjct: 314  ARAFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAKTVTAASPMAPACGLYLGEVKYDLP 373


>gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 373

 Score =  437 bits (1124), Expect = e-120
 Identities = 220/343 (64%), Positives = 265/343 (77%), Gaps = 4/343 (1%)
 Frame = +1

Query: 121  EEDEEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSPTVAGALEEAFHKFIGQPV 300
            +++EE    +   P  G QRY +A+EY+GTRFSGSQKQ    TV GALEEAF KF+G PV
Sbjct: 35   DDEEEEEKEMTQNPRNGIQRYFLAIEYIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHPV 94

Query: 301  SIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGVVKRALNHFLHKNEGDMSV 480
            S+  SSRTDAGVHALSNVCHVD++R SK++PGEVLPPHEP VV RA+NHFL K++ D++V
Sbjct: 95   SVSCSSRTDAGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQKHDSDLTV 154

Query: 481  IDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWHVPEELDLPAMKKACSILV 660
            IDVRCVP+DFHARYKALERTYFYR+LSGP+ LS F+KDRAWHV EEL+LPAM++AC +LV
Sbjct: 155  IDVRCVPSDFHARYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRVLV 214

Query: 661  GHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFP-XXXXXXXXXXNSDLLLCADKSE 837
            G HDFSSFRA GCQA SPIRTLDEL+V+EV+   +FP           +SD       SE
Sbjct: 215  GSHDFSSFRAAGCQAKSPIRTLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSNSE 274

Query: 838  YE---SSTPGLVEFHNDAGSFTAKSSIEFGQRARHRCYVITARARSFLYHQVRLMVGVLK 1008
             +   SS+P + +        T+   + FG+R RHRC V+TARARSFLYHQVRL+VGVLK
Sbjct: 275  TDIPPSSSPCIDKV------TTSSEDVGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLK 328

Query: 1009 SVGTGNLDASDVERILDAKTVTAASAIAPACGLYLGNVKYDLP 1137
            +VGTGNL   DVERIL+AK+VT+AS +APACGLYLG VKYDLP
Sbjct: 329  AVGTGNLTIPDVERILNAKSVTSASPMAPACGLYLGEVKYDLP 371


>ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Populus trichocarpa]
            gi|550312358|gb|ERP48449.1| hypothetical protein
            POPTR_0022s00690g [Populus trichocarpa]
          Length = 370

 Score =  437 bits (1124), Expect = e-120
 Identities = 225/367 (61%), Positives = 269/367 (73%), Gaps = 21/367 (5%)
 Frame = +1

Query: 94   KPSKSSRPIEED------EEGRSPLMNPPPGGAQRYLVAVEYVGTRFSGSQKQPNSPTVA 255
            +PSK S+ ++E+      EE +  +      G QRYLVAVEY+GTRF GSQ+Q N  TV 
Sbjct: 17   RPSKISKTLQEEGDSSEEEEEKEAVDKSMKPGLQRYLVAVEYIGTRFCGSQQQLNHRTVV 76

Query: 256  GALEEAFHKFIGQPVSIYFSSRTDAGVHALSNVCHVDVERISKKRPGEVLPPHEPGVVKR 435
            G L+EAFHKFIGQPV+I  SSRTDAGVHALSNVCHVDVERISK++PGEVLPPHEP VV++
Sbjct: 77   GVLQEAFHKFIGQPVTICLSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVRK 136

Query: 436  ALNHFLHKNEGDMSVIDVRCVPADFHARYKALERTYFYRILSGPDSLSAFDKDRAWHVPE 615
            A+NHFL K EGD+ V DVR VPA FHAR+KA ERTYFYR+L GP+ LS F+KDRAWHV E
Sbjct: 137  AVNHFLQKKEGDIMVTDVRSVPAHFHARFKAQERTYFYRLLIGPELLSTFEKDRAWHVSE 196

Query: 616  ELDLPAMKKACSILVGHHDFSSFRATGCQANSPIRTLDELHVAEVVSYPYFPXXXXXXXX 795
            ELDL +M++AC +LVGHHDFSSFRA+GCQA SP RTL+EL V EVVS PYFP        
Sbjct: 197  ELDLVSMQEACKVLVGHHDFSSFRASGCQAKSPFRTLEELSVLEVVSTPYFPS------- 249

Query: 796  XXNSDLLLCADKSEYESSTPGLVEFHND---------------AGSFTAKSSIEFGQRAR 930
                      ++ +  S+  G   FHN                AG   + + + FG R R
Sbjct: 250  --------ITEREQNSSNGEGPHSFHNKCKTGLPTGSISNGFMAGGSNSGTDLGFGIRRR 301

Query: 931  HRCYVITARARSFLYHQVRLMVGVLKSVGTGNLDASDVERILDAKTVTAASAIAPACGLY 1110
            HRCYVITAR+RSFLYHQVRL+VGVLKSVGTG+L  SDVERIL+A+++TAAS +APACGLY
Sbjct: 302  HRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILNARSITAASPMAPACGLY 361

Query: 1111 LGNVKYD 1131
            LG+VKY+
Sbjct: 362  LGHVKYE 368