BLASTX nr result

ID: Stemona21_contig00020708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00020708
         (791 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006649858.1| PREDICTED: glycine-rich RNA-binding protein ...   129   2e-27
ref|XP_004981486.1| PREDICTED: glycine-rich RNA-binding protein ...   123   8e-26
ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea ma...   120   4e-25
gb|EXC35053.1| Cold-inducible RNA-binding protein [Morus notabilis]   119   1e-24
ref|XP_006848599.1| hypothetical protein AMTR_s00168p00066520 [A...   119   1e-24
ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [S...   119   1e-24
ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein ...   117   3e-24
ref|XP_006292104.1| hypothetical protein CARUB_v10018300mg [Caps...   115   2e-23
ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arab...   114   5e-23
ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protei...   113   7e-23
ref|NP_190188.1| RNA recognition motif-containing protein [Arabi...   113   7e-23
ref|XP_004294595.1| PREDICTED: polyadenylate-binding protein, cy...   109   1e-21
ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protei...   109   1e-21
ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protei...   109   1e-21
ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp....   108   3e-21
ref|XP_002533105.1| cold-inducible RNA binding protein, putative...   108   3e-21
ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protei...   107   6e-21
ref|XP_006424765.1| hypothetical protein CICLE_v10029673mg [Citr...   106   8e-21
gb|EMJ09753.1| hypothetical protein PRUPE_ppa024320mg [Prunus pe...   106   1e-20
ref|XP_006279867.1| hypothetical protein CARUB_v10028559mg [Caps...   105   2e-20

>ref|XP_006649858.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           [Oryza brachyantha]
          Length = 105

 Score =  129 bits (323), Expect = 2e-27
 Identities = 66/104 (63%), Positives = 82/104 (78%)
 Frame = -3

Query: 504 GSRLASLSPTLTTEIRSKGVRRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDG 325
           G RLA L+       R  G + FS+EIFVSRLS+YTT+EE + +F+ FG V+EARL+RD 
Sbjct: 5   GGRLAGLAS------RMVGAKSFSTEIFVSRLSFYTTEEELKNIFTPFGAVEEARLVRDN 58

Query: 324 RTQRPKGFGFVNYASEAEAQKAVEAMDGRILGGRLIFVEIARPR 193
           +T RPKGFGFV Y+S+AEA+KAV+AMDGRIL GRLIFVEIA+ R
Sbjct: 59  QTGRPKGFGFVKYSSQAEAEKAVKAMDGRILRGRLIFVEIAKER 102


>ref|XP_004981486.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           isoform X1 [Setaria italica]
           gi|514813407|ref|XP_004981487.1| PREDICTED: glycine-rich
           RNA-binding protein 4, mitochondrial-like isoform X2
           [Setaria italica]
          Length = 104

 Score =  123 bits (308), Expect = 8e-26
 Identities = 65/104 (62%), Positives = 82/104 (78%)
 Frame = -3

Query: 504 GSRLASLSPTLTTEIRSKGVRRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDG 325
           G+R+  LS  +       G+R FS+EIFVSRLS+YTT+EE + +FS FG VKEARL+RD 
Sbjct: 5   GARMVGLSSQVL------GMRCFSTEIFVSRLSFYTTEEELKDVFSPFGNVKEARLMRDS 58

Query: 324 RTQRPKGFGFVNYASEAEAQKAVEAMDGRILGGRLIFVEIARPR 193
           +T R KGFGFVNY+S+AEA+KAV+AM GRIL GRLIFVE+A+ R
Sbjct: 59  QTGRLKGFGFVNYSSQAEAEKAVKAMHGRILRGRLIFVEMAQGR 102


>ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
           gi|223975005|gb|ACN31690.1| unknown [Zea mays]
           gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein
           ZEAMMB73_633512 [Zea mays]
          Length = 103

 Score =  120 bits (302), Expect = 4e-25
 Identities = 60/90 (66%), Positives = 78/90 (86%)
 Frame = -3

Query: 468 TEIRSKGVRRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVN 289
           T + S+ +R FS+EIFVSRLS+YTT+EEF+ +FS FG V+EARL+RD +T R KGFGFV 
Sbjct: 9   TGLTSQVLRCFSTEIFVSRLSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVK 68

Query: 288 YASEAEAQKAVEAMDGRILGGRLIFVEIAR 199
           Y+S+AEA+KAV+AMDG+IL GRLIFVE+A+
Sbjct: 69  YSSQAEAEKAVKAMDGKILRGRLIFVEMAK 98


>gb|EXC35053.1| Cold-inducible RNA-binding protein [Morus notabilis]
          Length = 94

 Score =  119 bits (298), Expect = 1e-24
 Identities = 61/92 (66%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
 Frame = -3

Query: 444 RRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQ 265
           +R SS++FVSRLS YTT+E  +KLFS FGEV EARL+ D +TQRPKGFGFV Y SE EAQ
Sbjct: 3   KRLSSQLFVSRLSSYTTNEHLKKLFSPFGEVLEARLVLDSKTQRPKGFGFVTYESEVEAQ 62

Query: 264 KAVEAMDGRILGGRLIFVEIARPR--GEENVS 175
           KA++AM+GRI+ GRLIFVE+A+    GEE  S
Sbjct: 63  KALKAMNGRIVDGRLIFVEVAKTSKPGEEATS 94


>ref|XP_006848599.1| hypothetical protein AMTR_s00168p00066520 [Amborella trichopoda]
           gi|548851921|gb|ERN10180.1| hypothetical protein
           AMTR_s00168p00066520 [Amborella trichopoda]
          Length = 125

 Score =  119 bits (298), Expect = 1e-24
 Identities = 60/103 (58%), Positives = 76/103 (73%)
 Frame = -3

Query: 495 LASLSPTLTTEIRSKGVRRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQ 316
           ++ L+  L    R    R FSSE+FVSRLS+Y+T++  +  FS FGEV EARL+ D  T 
Sbjct: 11  ISGLAKPLLLSNRPAFSRGFSSELFVSRLSFYSTEQSLKDAFSPFGEVIEARLVIDKATL 70

Query: 315 RPKGFGFVNYASEAEAQKAVEAMDGRILGGRLIFVEIARPRGE 187
           RPKG+GF+ Y SE EAQKA++AMDGR LGGRLIFVE+A+PR E
Sbjct: 71  RPKGYGFIRYQSEIEAQKAMKAMDGRFLGGRLIFVEVAKPRPE 113


>ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
           gi|241924381|gb|EER97525.1| hypothetical protein
           SORBIDRAFT_02g039025 [Sorghum bicolor]
          Length = 83

 Score =  119 bits (298), Expect = 1e-24
 Identities = 59/83 (71%), Positives = 74/83 (89%)
 Frame = -3

Query: 447 VRRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEA 268
           +R FS+EIFVSRLS+YTT+EEF+ +FS FG V+EARL+RD +T R KGFGFV Y+S+AEA
Sbjct: 1   MRCFSTEIFVSRLSFYTTEEEFKDVFSSFGTVEEARLMRDQQTGRIKGFGFVKYSSQAEA 60

Query: 267 QKAVEAMDGRILGGRLIFVEIAR 199
           +KAV+AMDGRIL GRLIFVE+A+
Sbjct: 61  EKAVKAMDGRILRGRLIFVEMAK 83


>ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Brachypodium distachyon]
          Length = 108

 Score =  117 bits (294), Expect = 3e-24
 Identities = 55/89 (61%), Positives = 73/89 (82%)
 Frame = -3

Query: 459 RSKGVRRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYAS 280
           R  G + FS+EIFVS+LS+YTT+EE + +FS FG ++EARL+RD +T RPKGFGFV Y+S
Sbjct: 17  RVAGTKGFSTEIFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSS 76

Query: 279 EAEAQKAVEAMDGRILGGRLIFVEIARPR 193
           +  A+KAV+AMDGRI+ GR+IFVE A+ R
Sbjct: 77  QVAAEKAVKAMDGRIIRGRIIFVETAKER 105


>ref|XP_006292104.1| hypothetical protein CARUB_v10018300mg [Capsella rubella]
           gi|482560811|gb|EOA25002.1| hypothetical protein
           CARUB_v10018300mg [Capsella rubella]
          Length = 100

 Score =  115 bits (287), Expect = 2e-23
 Identities = 51/82 (62%), Positives = 72/82 (87%)
 Frame = -3

Query: 444 RRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQ 265
           +R S+++FVSRLS Y TD+  R+LFS+FG++KEARLIRD +TQRPKGFGF+ Y SE +A+
Sbjct: 3   KRVSAQLFVSRLSAYATDQSLRQLFSQFGQIKEARLIRDSKTQRPKGFGFITYESEDDAR 62

Query: 264 KAVEAMDGRILGGRLIFVEIAR 199
           KA++++DG+I+ GRLIFVE+A+
Sbjct: 63  KAMKSLDGKIVDGRLIFVEVAK 84


>ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
           lyrata] gi|297323288|gb|EFH53709.1| hypothetical protein
           ARALYDRAFT_905782 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score =  114 bits (284), Expect = 5e-23
 Identities = 52/86 (60%), Positives = 72/86 (83%)
 Frame = -3

Query: 444 RRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQ 265
           +R S+++FVSRLS YTTD+  R+LFS FG++KEARLIRD  TQRPKGFGF+ + SE +A+
Sbjct: 3   KRISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDAR 62

Query: 264 KAVEAMDGRILGGRLIFVEIARPRGE 187
           KA++++DG+I+ GRLIFVE+A+   E
Sbjct: 63  KALKSLDGKIVEGRLIFVEVAKSSEE 88


>ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|297746123|emb|CBI16179.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  113 bits (283), Expect = 7e-23
 Identities = 56/82 (68%), Positives = 71/82 (86%)
 Frame = -3

Query: 444 RRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQ 265
           RRFSSEIFV+RLS YTT+EE  ++FS FG V +ARLI+D +TQRPKGFGFV + SE +A+
Sbjct: 21  RRFSSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDAE 80

Query: 264 KAVEAMDGRILGGRLIFVEIAR 199
           KA++AM+GRI+ GRLIFVEIA+
Sbjct: 81  KALKAMNGRIVRGRLIFVEIAK 102


>ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|7630030|emb|CAB88326.1| RNA binding protein-like
           [Arabidopsis thaliana] gi|46931202|gb|AAT06405.1|
           At3g46020 [Arabidopsis thaliana]
           gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis
           thaliana] gi|332644581|gb|AEE78102.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 102

 Score =  113 bits (283), Expect = 7e-23
 Identities = 51/82 (62%), Positives = 71/82 (86%)
 Frame = -3

Query: 444 RRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQ 265
           +R S+++FVSRLS YTTD+  R+LFS FG++KEARLIRD  TQRPKGFGF+ + SE +A+
Sbjct: 3   KRISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDAR 62

Query: 264 KAVEAMDGRILGGRLIFVEIAR 199
           KA++++DG+I+ GRLIFVE+A+
Sbjct: 63  KALKSLDGKIVDGRLIFVEVAK 84


>ref|XP_004294595.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like isoform 2 [Fragaria vesca subsp. vesca]
          Length = 91

 Score =  109 bits (272), Expect = 1e-21
 Identities = 51/83 (61%), Positives = 66/83 (79%)
 Frame = -3

Query: 444 RRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQ 265
           +R  S +FVSRLS +T+ E+ R++FS FG+V EARL+ D  TQRPKGFGFV Y SE EAQ
Sbjct: 3   KRLGSTLFVSRLSSFTSKEKLRQMFSPFGDVTEARLVIDPNTQRPKGFGFVTYKSEVEAQ 62

Query: 264 KAVEAMDGRILGGRLIFVEIARP 196
           KA++ MDGR++ GRL+FVE+A P
Sbjct: 63  KAIKVMDGRMVDGRLLFVEVAHP 85


>ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
           sativus]
          Length = 95

 Score =  109 bits (272), Expect = 1e-21
 Identities = 53/81 (65%), Positives = 65/81 (80%)
 Frame = -3

Query: 441 RFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQK 262
           R  SE+F+SRLS YTT E  + LFS FG + EARLIRD +T+RPKGFGFV + S AEA+K
Sbjct: 4   RLGSELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKK 63

Query: 261 AVEAMDGRILGGRLIFVEIAR 199
           A++AMDGRI+ GRLIFVE A+
Sbjct: 64  ALKAMDGRIVDGRLIFVEFAK 84


>ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
           [Cucumis sativus] gi|449435013|ref|XP_004135290.1|
           PREDICTED: cold-inducible RNA-binding protein B-like
           isoform 2 [Cucumis sativus]
          Length = 89

 Score =  109 bits (272), Expect = 1e-21
 Identities = 53/81 (65%), Positives = 65/81 (80%)
 Frame = -3

Query: 441 RFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQK 262
           R  SE+F+SRLS YTT E  + LFS FG + EARLIRD +T+RPKGFGFV + S AEA+K
Sbjct: 4   RLGSELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKK 63

Query: 261 AVEAMDGRILGGRLIFVEIAR 199
           A++AMDGRI+ GRLIFVE A+
Sbjct: 64  ALKAMDGRIVDGRLIFVEFAK 84


>ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310490|gb|EFH40914.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score =  108 bits (269), Expect = 3e-21
 Identities = 49/82 (59%), Positives = 70/82 (85%)
 Frame = -3

Query: 444 RRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQ 265
           +RF++++FVSRLS YTTD+  R+LF+ FG++ EARLIRD +TQRPKGFGF+ + SE +AQ
Sbjct: 3   KRFTTQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQ 62

Query: 264 KAVEAMDGRILGGRLIFVEIAR 199
            A++A++G+I+ GRLIFVE A+
Sbjct: 63  NALKALNGKIVNGRLIFVEAAK 84


>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
           gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
           protein, putative [Ricinus communis]
          Length = 94

 Score =  108 bits (269), Expect = 3e-21
 Identities = 51/81 (62%), Positives = 68/81 (83%)
 Frame = -3

Query: 441 RFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQK 262
           R  S++FV RLS YTT+++  KLFS FG VKEARL+ D RTQ+PKGFGFV + SE++AQK
Sbjct: 4   RLGSQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQAQK 63

Query: 261 AVEAMDGRILGGRLIFVEIAR 199
           A++AM+GRI+ GRL+FVE+A+
Sbjct: 64  ALKAMNGRIVDGRLLFVEVAK 84


>ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protein-like [Solanum
           tuberosum]
          Length = 125

 Score =  107 bits (266), Expect = 6e-21
 Identities = 52/91 (57%), Positives = 70/91 (76%)
 Frame = -3

Query: 474 LTTEIRSKGVRRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGF 295
           L T + S+       ++FV+RLS+YTT E+ +KLFS FG V EARL++D RTQRPKGFGF
Sbjct: 22  LDTALLSETQMAKGLQLFVNRLSFYTTSEQLKKLFSPFGVVTEARLVKDPRTQRPKGFGF 81

Query: 294 VNYASEAEAQKAVEAMDGRILGGRLIFVEIA 202
           V + SEA+AQ A+ +++GRI+ GRLIFVE+A
Sbjct: 82  VTFESEADAQNALNSLNGRIVDGRLIFVEVA 112


>ref|XP_006424765.1| hypothetical protein CICLE_v10029673mg [Citrus clementina]
           gi|568870147|ref|XP_006488271.1| PREDICTED: glycine-rich
           RNA-binding protein 4, mitochondrial-like [Citrus
           sinensis] gi|557526699|gb|ESR38005.1| hypothetical
           protein CICLE_v10029673mg [Citrus clementina]
          Length = 94

 Score =  106 bits (265), Expect = 8e-21
 Identities = 50/80 (62%), Positives = 66/80 (82%)
 Frame = -3

Query: 432 SEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQKAVE 253
           +++FVSRLS Y T +EF+ LFSRFG V +A+LI D +TQRPKGFGF+ + SE +AQKA++
Sbjct: 7   AQLFVSRLSSYITTKEFKALFSRFGVVTDAKLITDPKTQRPKGFGFITFQSEDDAQKALK 66

Query: 252 AMDGRILGGRLIFVEIARPR 193
            MDGRI+ GRLIFVE+A+ R
Sbjct: 67  TMDGRIVNGRLIFVEVAKSR 86


>gb|EMJ09753.1| hypothetical protein PRUPE_ppa024320mg [Prunus persica]
          Length = 94

 Score =  106 bits (264), Expect = 1e-20
 Identities = 50/87 (57%), Positives = 71/87 (81%)
 Frame = -3

Query: 444 RRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQ 265
           +R SS++FV+RLS +T +E+ ++LFS FG+V EAR++ D  TQRPKGFGFV Y S+ EAQ
Sbjct: 3   KRLSSQLFVNRLSSFTNNEQLKRLFSPFGDVTEARMVVDRITQRPKGFGFVTYKSDVEAQ 62

Query: 264 KAVEAMDGRILGGRLIFVEIARPRGEE 184
           KA++AM+GR++ GRLIFVE A+ + +E
Sbjct: 63  KALKAMNGRMVDGRLIFVEFAQNQKQE 89


>ref|XP_006279867.1| hypothetical protein CARUB_v10028559mg [Capsella rubella]
           gi|482548571|gb|EOA12765.1| hypothetical protein
           CARUB_v10028559mg [Capsella rubella]
          Length = 98

 Score =  105 bits (262), Expect = 2e-20
 Identities = 47/82 (57%), Positives = 70/82 (85%)
 Frame = -3

Query: 444 RRFSSEIFVSRLSYYTTDEEFRKLFSRFGEVKEARLIRDGRTQRPKGFGFVNYASEAEAQ 265
           +R+++++FVSRLS YTT++  R+LFS FG++ EARLI+D +TQRPKGFGF+ + SE +AQ
Sbjct: 3   KRYTAQLFVSRLSAYTTEQSLRQLFSPFGQITEARLIKDQQTQRPKGFGFITFKSENDAQ 62

Query: 264 KAVEAMDGRILGGRLIFVEIAR 199
           KA++A++G+I+  RLIFVE A+
Sbjct: 63  KALKALNGKIVDSRLIFVEAAK 84


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