BLASTX nr result

ID: Stemona21_contig00019946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00019946
         (495 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004962639.1| PREDICTED: E3 ubiquitin-protein ligase SINA-...    63   5e-08
ref|XP_002442006.1| hypothetical protein SORBIDRAFT_08g006830 [S...    59   9e-07
gb|ACN27356.1| unknown [Zea mays] gi|224032681|gb|ACN35416.1| un...    59   9e-07
ref|NP_001141682.1| Ubiquitin-protein ligase/ zinc ion binding p...    59   9e-07
dbj|BAD61768.1| SIAH1 protein-like [Oryza sativa Japonica Group]       55   1e-05
ref|NP_001057483.2| Os06g0311300 [Oryza sativa Japonica Group] g...    55   1e-05
gb|EEC80479.1| hypothetical protein OsI_22706 [Oryza sativa Indi...    55   1e-05

>ref|XP_004962639.1| PREDICTED: E3 ubiquitin-protein ligase SINA-like 10-like isoform X1
           [Setaria italica]
          Length = 331

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
 Frame = -1

Query: 495 RPSAFNGNFMYELTASGMGST---LHLRASVTNIRQWNGVYPGGVFLLVPHDFCAPSWKI 325
           R    N NF YE+ A+   +T   L L+A VTNIR+W G++P   FLLVP+ FC  S K+
Sbjct: 257 RTGNLNWNFTYEMRAASKANTENNLQLKACVTNIREWQGLHPTEAFLLVPYAFC-KSNKL 315

Query: 324 SLEVCIQK 301
           +L VCIQ+
Sbjct: 316 TLNVCIQR 323


>ref|XP_002442006.1| hypothetical protein SORBIDRAFT_08g006830 [Sorghum bicolor]
           gi|241942699|gb|EES15844.1| hypothetical protein
           SORBIDRAFT_08g006830 [Sorghum bicolor]
          Length = 326

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
 Frame = -1

Query: 495 RPSAFNGNFMYELTASGMGST---LHLRASVTNIRQWNGVYPGGVFLLVPHDFCAPSWKI 325
           R    NGNF YE+ A+  G+T   L L+ASVTN R+W G+ P   FLLVP+ F   S K+
Sbjct: 255 RNGNLNGNFFYEMRATSNGNTENSLQLKASVTNTREWQGLSPTEAFLLVPYAFIKSS-KL 313

Query: 324 SLEVCIQK 301
           +L V I++
Sbjct: 314 TLNVSIER 321


>gb|ACN27356.1| unknown [Zea mays] gi|224032681|gb|ACN35416.1| unknown [Zea mays]
           gi|414877777|tpg|DAA54908.1| TPA: hypothetical protein
           ZEAMMB73_014218 [Zea mays] gi|414877778|tpg|DAA54909.1|
           TPA: hypothetical protein ZEAMMB73_014218 [Zea mays]
           gi|414877779|tpg|DAA54910.1| TPA: hypothetical protein
           ZEAMMB73_014218 [Zea mays]
          Length = 149

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
 Frame = -1

Query: 495 RPSAFNGNFMYELTASGMGST---LHLRASVTNIRQWNGVYPGGVFLLVPHDFCAPSWKI 325
           R    N NF+YE+ A+  G+T   L L+ASVTN R+W G+ P  VFLLVP+ F + S K+
Sbjct: 78  RTGNLNWNFLYEMRATSKGNTKNSLQLKASVTNTREWRGLNPTEVFLLVPYAF-SKSSKL 136

Query: 324 SLEVCIQK 301
           +L V I++
Sbjct: 137 TLNVSIER 144


>ref|NP_001141682.1| Ubiquitin-protein ligase/ zinc ion binding protein [Zea mays]
           gi|194705536|gb|ACF86852.1| unknown [Zea mays]
           gi|195658737|gb|ACG48836.1| ubiquitin-protein ligase/
           zinc ion binding protein [Zea mays]
           gi|414877775|tpg|DAA54906.1| TPA: Ubiquitin-protein
           ligase/ zinc ion binding protein [Zea mays]
          Length = 327

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
 Frame = -1

Query: 495 RPSAFNGNFMYELTASGMGST---LHLRASVTNIRQWNGVYPGGVFLLVPHDFCAPSWKI 325
           R    N NF+YE+ A+  G+T   L L+ASVTN R+W G+ P  VFLLVP+ F + S K+
Sbjct: 256 RTGNLNWNFLYEMRATSKGNTKNSLQLKASVTNTREWRGLNPTEVFLLVPYAF-SKSSKL 314

Query: 324 SLEVCIQK 301
           +L V I++
Sbjct: 315 TLNVSIER 322


>dbj|BAD61768.1| SIAH1 protein-like [Oryza sativa Japonica Group]
          Length = 577

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
 Frame = -1

Query: 495 RPSAFNGNFMYELTASGMG---STLHLRASVTNIRQWNGVYPGGVFLLVPHDFCAPSWKI 325
           R    N  F Y++ A+      + L L+ASVTN RQW G+YP   FLLVP DFC  S  I
Sbjct: 251 RSGNLNWMFSYQIEATSRKKPENRLQLKASVTNTRQWTGIYPSEAFLLVPFDFCHSS-NI 309

Query: 324 SLEVCIQK 301
            L + I++
Sbjct: 310 VLNISIER 317


>ref|NP_001057483.2| Os06g0311300 [Oryza sativa Japonica Group]
           gi|222635459|gb|EEE65591.1| hypothetical protein
           OsJ_21114 [Oryza sativa Japonica Group]
           gi|255676979|dbj|BAF19397.2| Os06g0311300 [Oryza sativa
           Japonica Group]
          Length = 321

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
 Frame = -1

Query: 495 RPSAFNGNFMYELTASGMG---STLHLRASVTNIRQWNGVYPGGVFLLVPHDFCAPSWKI 325
           R    N  F Y++ A+      + L L+ASVTN RQW G+YP   FLLVP DFC  S  I
Sbjct: 251 RSGNLNWMFSYQIEATSRKKPENRLQLKASVTNTRQWTGIYPSEAFLLVPFDFCHSS-NI 309

Query: 324 SLEVCIQK 301
            L + I++
Sbjct: 310 VLNISIER 317


>gb|EEC80479.1| hypothetical protein OsI_22706 [Oryza sativa Indica Group]
          Length = 321

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
 Frame = -1

Query: 495 RPSAFNGNFMYELTASGMG---STLHLRASVTNIRQWNGVYPGGVFLLVPHDFCAPSWKI 325
           R    N  F Y++ A+      + L L+ASVTN RQW G+YP   FLLVP DFC  S  I
Sbjct: 251 RSGNLNWMFSYQIEATSRKKPENRLQLKASVTNTRQWTGIYPSEAFLLVPFDFCHSS-NI 309

Query: 324 SLEVCIQK 301
            L + I++
Sbjct: 310 VLNISIER 317


Top