BLASTX nr result

ID: Stemona21_contig00019482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00019482
         (824 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524463.1| nucleic acid binding protein, putative [Rici...    72   2e-10
gb|EOY31005.1| Nucleic acid binding protein, putative [Theobroma...    65   3e-08
ref|XP_004288814.1| PREDICTED: zinc finger CCCH domain-containin...    60   7e-07
ref|XP_006450976.1| hypothetical protein CICLE_v10007946mg [Citr...    59   2e-06
ref|XP_006475812.1| PREDICTED: zinc finger CCCH domain-containin...    58   4e-06

>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536251|gb|EEF37903.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 530

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
 Frame = +1

Query: 1   EEGRSRHVKASLRLSSEVVKSSAENEVKPTQQTSAEFTGPKSLAQIKEEKTKTTVEGD-- 174
           +  + R +     LSSEV++  A  E K + Q S +FTGPK+LAQIKEEK K    GD  
Sbjct: 439 QRDKERRLARKQSLSSEVLRKPASKERK-SSQASTQFTGPKTLAQIKEEKKKAEENGDYT 497

Query: 175 -SSQYQRRARDNDFEGPKPLSELLTRKRRP 261
             +    R    DFE PKPLSE+L  KRRP
Sbjct: 498 GKTDNSSRMATADFESPKPLSEILKDKRRP 527


>gb|EOY31005.1| Nucleic acid binding protein, putative [Theobroma cacao]
          Length = 539

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 40/83 (48%), Positives = 49/83 (59%)
 Frame = +1

Query: 40  LSSEVVKSSAENEVKPTQQTSAEFTGPKSLAQIKEEKTKTTVEGDSSQYQRRARDNDFEG 219
           +SSEV ++    E K T  ++A FTGPK+LAQIKEEK KT   G   ++  R    DF G
Sbjct: 456 VSSEVSRNLISRERKSTHASTA-FTGPKTLAQIKEEKKKTEENGGKMRHSGRTALADFLG 514

Query: 220 PKPLSELLTRKRRPLLSSDSTSS 288
           PKPLSE+L  K R     D  SS
Sbjct: 515 PKPLSEILKDKGRLDTVRDGNSS 537


>ref|XP_004288814.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Fragaria vesca subsp. vesca]
          Length = 490

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
 Frame = +1

Query: 43  SSEVVKSSAENEVKPTQQTSAEFTGPKSLAQIKEEKTKTTVEGD---SSQYQRRARDNDF 213
           SSE  ++    E + +++    FTGPKSLAQIKEEK K    G     S+  +R RD DF
Sbjct: 407 SSEFTRNPVPREKRSSKEDLTVFTGPKSLAQIKEEKKKAGDNGGGIRKSRCVQRTRD-DF 465

Query: 214 EGPKPLSELLTRKRRPLLSSDSTSS 288
           +GPKP +E+L  KR+    S S S+
Sbjct: 466 QGPKPFTEILKEKRKIADRSGSGSN 490


>ref|XP_006450976.1| hypothetical protein CICLE_v10007946mg [Citrus clementina]
           gi|557554202|gb|ESR64216.1| hypothetical protein
           CICLE_v10007946mg [Citrus clementina]
          Length = 539

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
 Frame = +1

Query: 88  TQQTSAEFTGPKSLAQIKEEKTKTTVEGDS-SQYQRRARD-NDFEGPKPLSELLTRKRRP 261
           + QT   FTGPKSLA+IKEEK K    G    +    +R   DF+GPKPLSE+L  KRRP
Sbjct: 469 SSQTETAFTGPKSLAEIKEEKKKAEESGGHFGKVGHLSRTLTDFQGPKPLSEILKEKRRP 528

Query: 262 LLSSDS 279
              SD+
Sbjct: 529 GTVSDA 534


>ref|XP_006475812.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           isoform X1 [Citrus sinensis]
           gi|568843854|ref|XP_006475813.1| PREDICTED: zinc finger
           CCCH domain-containing protein 34-like isoform X2
           [Citrus sinensis]
          Length = 539

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
 Frame = +1

Query: 88  TQQTSAEFTGPKSLAQIKEEKTKTTVEGDS-SQYQRRARD-NDFEGPKPLSELLTRKRRP 261
           + QT   FTGPKSLA+I+EEK K    G    +    +R   DF+GPKPLSE+L  KRRP
Sbjct: 469 SSQTETAFTGPKSLAEIREEKKKAEESGGHFGKVGHLSRTLTDFQGPKPLSEILKEKRRP 528

Query: 262 LLSSDS 279
              SD+
Sbjct: 529 GTVSDA 534


Top