BLASTX nr result
ID: Stemona21_contig00019349
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00019349
(1466 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY23465.1| Polypyrimidine tract-binding protein isoform 1 [T... 46 3e-07
gb|EOY23466.1| Polypyrimidine tract-binding protein isoform 2 [T... 46 3e-07
ref|XP_001766117.1| predicted protein [Physcomitrella patens] gi... 46 4e-07
ref|XP_001782305.1| predicted protein [Physcomitrella patens] gi... 46 4e-07
ref|XP_004168482.1| PREDICTED: polypyrimidine tract-binding prot... 45 7e-07
ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding prot... 45 1e-06
gb|ADE77057.1| unknown [Picea sitchensis] 45 2e-06
gb|EXB72450.1| Polypyrimidine tract-binding protein-2-like prote... 44 3e-06
>gb|EOY23465.1| Polypyrimidine tract-binding protein isoform 1 [Theobroma cacao]
Length = 463
Score = 46.2 bits (108), Expect(2) = 3e-07
Identities = 26/38 (68%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Frame = +3
Query: 765 FGVCRKAKILEPESNVL-ASIENMQYAVTVDVIHSVNS 875
F + K LEPESNVL ASIENMQYAVT+DV+H V S
Sbjct: 251 FSLGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFS 288
Score = 36.6 bits (83), Expect(2) = 3e-07
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +2
Query: 593 RDYTNRYLPVAPSAIGGGRQVS 658
RDYTN YLPVAPSAI G Q S
Sbjct: 231 RDYTNPYLPVAPSAIDGSGQFS 252
>gb|EOY23466.1| Polypyrimidine tract-binding protein isoform 2 [Theobroma cacao]
Length = 442
Score = 46.2 bits (108), Expect(2) = 3e-07
Identities = 26/38 (68%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Frame = +3
Query: 765 FGVCRKAKILEPESNVL-ASIENMQYAVTVDVIHSVNS 875
F + K LEPESNVL ASIENMQYAVT+DV+H V S
Sbjct: 230 FSLGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFS 267
Score = 36.6 bits (83), Expect(2) = 3e-07
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +2
Query: 593 RDYTNRYLPVAPSAIGGGRQVS 658
RDYTN YLPVAPSAI G Q S
Sbjct: 210 RDYTNPYLPVAPSAIDGSGQFS 231
>ref|XP_001766117.1| predicted protein [Physcomitrella patens]
gi|162682760|gb|EDQ69176.1| predicted protein
[Physcomitrella patens]
Length = 488
Score = 45.8 bits (107), Expect(2) = 4e-07
Identities = 26/38 (68%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 765 FGVCRKAKILEPESNVL-ASIENMQYAVTVDVIHSVNS 875
F V K EPESNVL SIENMQYAVT+DVIH+V S
Sbjct: 230 FSVGPDGKRREPESNVLLVSIENMQYAVTIDVIHTVFS 267
Score = 36.6 bits (83), Expect(2) = 4e-07
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +2
Query: 593 RDYTNRYLPVAPSAIGGGRQVS 658
RDYTN YLPVAPSAI G Q S
Sbjct: 210 RDYTNPYLPVAPSAIDGSGQFS 231
>ref|XP_001782305.1| predicted protein [Physcomitrella patens]
gi|162666235|gb|EDQ52895.1| predicted protein
[Physcomitrella patens]
Length = 348
Score = 45.8 bits (107), Expect(2) = 4e-07
Identities = 26/38 (68%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 765 FGVCRKAKILEPESNVL-ASIENMQYAVTVDVIHSVNS 875
F V K EPESNVL SIENMQYAVT+DVIH+V S
Sbjct: 230 FSVGPDGKRREPESNVLLVSIENMQYAVTIDVIHTVFS 267
Score = 36.6 bits (83), Expect(2) = 4e-07
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +2
Query: 593 RDYTNRYLPVAPSAIGGGRQVS 658
RDYTN YLPVAPSAI G Q S
Sbjct: 210 RDYTNPYLPVAPSAIDGSGQFS 231
>ref|XP_004168482.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Cucumis sativus]
Length = 457
Score = 45.4 bits (106), Expect(2) = 7e-07
Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +3
Query: 756 TIWFGVCRKAKILEPESNVL-ASIENMQYAVTVDVIHSVNS 875
++ F V K LEPESNVL ASIENMQYAVT++V+H V S
Sbjct: 231 SLQFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFS 271
Score = 36.2 bits (82), Expect(2) = 7e-07
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +2
Query: 593 RDYTNRYLPVAPSAIGGGRQVS 658
RDYTN YLPVAPSAI G Q S
Sbjct: 210 RDYTNPYLPVAPSAIDGSGQSS 231
>ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Cucumis sativus]
Length = 776
Score = 45.1 bits (105), Expect(2) = 1e-06
Identities = 26/38 (68%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Frame = +3
Query: 765 FGVCRKAKILEPESNVL-ASIENMQYAVTVDVIHSVNS 875
F V K LEPESNVL ASIENMQYAVT++V+H V S
Sbjct: 553 FTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFS 590
Score = 35.4 bits (80), Expect(2) = 1e-06
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +2
Query: 593 RDYTNRYLPVAPSAIGGGRQ 652
RDYTN YLPVAPSAI G Q
Sbjct: 533 RDYTNPYLPVAPSAIDGSGQ 552
>gb|ADE77057.1| unknown [Picea sitchensis]
Length = 528
Score = 45.4 bits (106), Expect(2) = 2e-06
Identities = 25/36 (69%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Frame = +3
Query: 765 FGVCRKAKILEPESNVL-ASIENMQYAVTVDVIHSV 869
FG+ K EPESNVL ASIENMQYAVT+DV+ SV
Sbjct: 230 FGIGPDGKRREPESNVLLASIENMQYAVTLDVLRSV 265
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +2
Query: 593 RDYTNRYLPVAPSAIGGGRQ 652
RDYTN YLPVAPSAI G Q
Sbjct: 210 RDYTNPYLPVAPSAIDGTGQ 229
>gb|EXB72450.1| Polypyrimidine tract-binding protein-2-like protein [Morus
notabilis]
Length = 444
Score = 43.9 bits (102), Expect(2) = 3e-06
Identities = 26/38 (68%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Frame = +3
Query: 765 FGVCRKAKILEPESNVL-ASIENMQYAVTVDVIHSVNS 875
F V K LEPESNVL ASIENMQYAVT+DV++ V S
Sbjct: 230 FVVGLDGKKLEPESNVLLASIENMQYAVTLDVLYMVFS 267
Score = 35.4 bits (80), Expect(2) = 3e-06
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +2
Query: 593 RDYTNRYLPVAPSAIGGGRQ 652
RDYTN YLPVAPSAI G Q
Sbjct: 210 RDYTNPYLPVAPSAIDGSGQ 229