BLASTX nr result
ID: Stemona21_contig00019268
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00019268
(332 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana] 72 6e-11
gb|AFU25705.1| gag-pol precursor [Castanea mollissima] 71 2e-10
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] 70 2e-10
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata] 70 4e-10
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi... 70 4e-10
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614... 69 8e-10
ref|WP_008481407.1| hypothetical protein [Nitrolancetus hollandi... 69 8e-10
gb|ABA99541.1| retrotransposon protein, putative, unclassified [... 68 1e-09
gb|ABA95559.1| retrotransposon protein, putative, unclassified [... 68 1e-09
gb|AAF03460.1|AC009992_2 putative reverse transcriptase, 5' part... 68 1e-09
gb|ABA99805.1| retrotransposon protein, putative, unclassified [... 67 2e-09
emb|CAE06012.3| OSJNBa0016O02.22 [Oryza sativa Japonica Group] 67 2e-09
gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsi... 67 2e-09
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607... 67 2e-09
emb|CAE03705.3| OSJNBb0034G17.13 [Oryza sativa Japonica Group] 67 2e-09
gb|AAK55774.1|AC079038_8 Putative polyprotein [Oryza sativa] 67 2e-09
gb|ABA99479.1| retrotransposon protein, putative, unclassified [... 67 3e-09
gb|AAN31788.1| Putative polyprotein [Oryza sativa Japonica Group... 67 3e-09
emb|CAH67052.1| OSIGBa0127A14.4 [Oryza sativa Indica Group] 67 3e-09
gb|AAU90238.1| putative polyprotein [Oryza sativa Japonica Group] 67 3e-09
>gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]
Length = 755
Score = 72.4 bits (176), Expect = 6e-11
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = +1
Query: 1 VLKKILLSTQEPGAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
VL+K+ +T EP GKLG NWEGPY ++++VRP Y+L L G + WN HL KYY
Sbjct: 696 VLQKVFQNTAEPNTGKLGTNWEGPYLISKIVRPEVYELADLSGKAVPRSWNAMHLRKYY 754
>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
Length = 1106
Score = 70.9 bits (172), Expect = 2e-10
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = +1
Query: 1 VLKKILLSTQEPGAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
VL+K++ + + P GKLG NWEGPYR+T V G Y+L LDG + PWN+ +L +YY
Sbjct: 1047 VLRKVVGTARNPAWGKLGTNWEGPYRITSVAGIGAYRLEDLDGRVVHRPWNVNNLRRYY 1105
>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +1
Query: 1 VLKKILLSTQEPGAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
VL+K+ +T E AGKLG NWEG Y+V+++VRPG Y+L T+ G + WN HL +YY
Sbjct: 1779 VLRKVFENTAEINAGKLGANWEGSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1837
>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
Length = 1103
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = +1
Query: 1 VLKKILLSTQEPGAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
VL+++ + +E GAGKLG NWEGPY +TEVVR G Y+L L+ + + PWN+ +L K+Y
Sbjct: 1044 VLRRVFDNKKEEGAGKLGINWEGPYIITEVVRNGVYRLKDLEDNPVKRPWNVINLKKFY 1102
>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1787
Score = 69.7 bits (169), Expect = 4e-10
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +1
Query: 1 VLKKILLSTQEPGAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
VL+K+ +T E AGKLG +WEGPY +++VV+PG Y+L T+DG + WN +L +YY
Sbjct: 1728 VLRKVFENTVEQDAGKLGAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWNSANLKRYY 1786
>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
Length = 1089
Score = 68.6 bits (166), Expect = 8e-10
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = +1
Query: 1 VLKKILLSTQEPGAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
VL+K+ +T+ P G LGP WEGPYRV PG Y+L DG + WN EHL KY+
Sbjct: 1030 VLRKVNQNTRNPNHGALGPKWEGPYRVIRATGPGAYKLACQDGRDVKRSWNAEHLKKYF 1088
>ref|WP_008481407.1| hypothetical protein [Nitrolancetus hollandicus]
gi|390170603|emb|CCF85985.1| hypothetical protein
NITHO_6470001 [Nitrolancetus hollandicus Lb]
Length = 60
Score = 68.6 bits (166), Expect = 8e-10
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +1
Query: 1 VLKKILLSTQEPGAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
+L+++ + +E GAGKLG NWEGPY VTEVVR G Y+L L+ + PWN+ +L K+Y
Sbjct: 1 MLRRVFDNKKEEGAGKLGINWEGPYIVTEVVRNGVYKLKDLEDRPVKRPWNVINLKKFY 59
>gb|ABA99541.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1904
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +1
Query: 37 GAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
G KL P WEGPYRV V RPG+ +LTT DG L NPWNIEHL ++Y
Sbjct: 1857 GLSKLSPMWEGPYRVIGVPRPGSVRLTTGDGTELPNPWNIEHLRRFY 1903
>gb|ABA95559.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1922
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/47 (63%), Positives = 33/47 (70%)
Frame = +1
Query: 37 GAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
G KL P WEGPYRV V RPG+ QL T DG L NPWNIEHL ++Y
Sbjct: 1875 GLSKLSPMWEGPYRVVGVPRPGSIQLATGDGTELPNPWNIEHLRRFY 1921
>gb|AAF03460.1|AC009992_2 putative reverse transcriptase, 5' partial [Arabidopsis thaliana]
Length = 177
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +1
Query: 1 VLKKILLSTQEPGAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
VLK++ + +E GAGKLG NWEGPY VTEVVR G + L L+ + PWN+ +L K+Y
Sbjct: 118 VLKRVFDNKKEEGAGKLGINWEGPYIVTEVVRNGVFGLKDLEDRPVKRPWNMVNLKKFY 176
>gb|ABA99805.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1831
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/47 (63%), Positives = 33/47 (70%)
Frame = +1
Query: 37 GAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
G KL P WEGPYRV V RPG+ QL T DG L NPWNIEHL ++Y
Sbjct: 1784 GLSKLSPMWEGPYRVIGVPRPGSVQLATGDGTELPNPWNIEHLRRFY 1830
>emb|CAE06012.3| OSJNBa0016O02.22 [Oryza sativa Japonica Group]
Length = 2027
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = +1
Query: 37 GAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
G KL P WEGPYRV V RPG+++L T DG L NPWNIEHL ++Y
Sbjct: 1980 GLSKLSPMWEGPYRVIGVPRPGSFRLATGDGTELPNPWNIEHLRRFY 2026
>gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1329
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +1
Query: 1 VLKKILLSTQEPGAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
VL+++ + E GAGKLG +WEGPY++T VVR G Y+L ++G T+ WN HL ++Y
Sbjct: 1270 VLRRVQQNKAEKGAGKLGISWEGPYKITHVVRNGVYRLINMEGKTVRRAWNSMHLKRFY 1328
>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
Length = 1866
Score = 67.0 bits (162), Expect = 2e-09
Identities = 28/59 (47%), Positives = 36/59 (61%)
Frame = +1
Query: 1 VLKKILLSTQEPGAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
VL+++ +T+ P G LGP WEGPYRV PG Y+L DG + WN EHL KY+
Sbjct: 1807 VLRRVNQNTRNPNHGALGPKWEGPYRVIRATGPGAYKLAYQDGRDVKRSWNAEHLKKYF 1865
>emb|CAE03705.3| OSJNBb0034G17.13 [Oryza sativa Japonica Group]
Length = 787
Score = 67.0 bits (162), Expect = 2e-09
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = +1
Query: 37 GAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
G KL P WEGPYRV V RPG+ +L T DG L NPWNIEHL ++Y
Sbjct: 740 GLSKLSPMWEGPYRVIGVPRPGSVRLATADGTELPNPWNIEHLRRFY 786
>gb|AAK55774.1|AC079038_8 Putative polyprotein [Oryza sativa]
Length = 2027
Score = 67.0 bits (162), Expect = 2e-09
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = +1
Query: 37 GAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
G KL P WEGPYRV V RPG+ +L T DG+ L NPWNIEHL ++Y
Sbjct: 1980 GLSKLSPMWEGPYRVIGVPRPGSIRLATGDGNELPNPWNIEHLRRFY 2026
>gb|ABA99479.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1322
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = +1
Query: 37 GAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
G KL P WEGPYRV V+RPG+ +L T DG L NPWNIEHL ++Y
Sbjct: 1275 GLSKLSPVWEGPYRVIGVLRPGSVRLATGDGTELPNPWNIEHLRRFY 1321
>gb|AAN31788.1| Putative polyprotein [Oryza sativa Japonica Group]
gi|31431648|gb|AAP53392.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 2027
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = +1
Query: 37 GAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
G KL P WEGPYRV V RPG+ +L T DG L NPWNIEHL ++Y
Sbjct: 1980 GLSKLSPMWEGPYRVISVPRPGSIRLATGDGTELPNPWNIEHLRRFY 2026
>emb|CAH67052.1| OSIGBa0127A14.4 [Oryza sativa Indica Group]
Length = 1983
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = +1
Query: 37 GAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
G KL P WEGPYRV V RPG+ +L T DG L NPWNIEHL ++Y
Sbjct: 1936 GLSKLSPMWEGPYRVIGVPRPGSVRLATSDGTELPNPWNIEHLRRFY 1982
>gb|AAU90238.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1923
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = +1
Query: 37 GAGKLGPNWEGPYRVTEVVRPGTYQLTTLDGHTLDNPWNIEHLIKYY 177
G KL P WEGPYRV V RPG+ +L T DG L NPWNIEHL ++Y
Sbjct: 1876 GLSKLSPMWEGPYRVIGVPRPGSVRLATSDGAELPNPWNIEHLRRFY 1922