BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00019024
         (558 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   223   3e-56
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   223   3e-56
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ...   222   4e-56
ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I...   213   2e-53
gb|ABK26380.1| unknown [Picea sitchensis]                             213   3e-53
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ...   212   4e-53
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun...   209   4e-52
ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, I...   209   4e-52
ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF8...   205   7e-51
ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g...   204   9e-51
gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi...   204   9e-51
gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 ...   204   2e-50
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I...   201   1e-49
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ...   201   1e-49
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr...   200   2e-49
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...   198   7e-49
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ...   196   2e-48
ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Caps...   196   3e-48
ref|XP_006402674.1| hypothetical protein EUTSA_v10006298mg [Eutr...   195   7e-48
ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutr...   195   7e-48

>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  223 bits (567), Expect = 3e-56
 Identities = 106/137 (77%), Positives = 124/137 (90%)
 Frame = +1

Query: 148 RMVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMV 327
           +MVE LFEDIFT+TR++PDGKKFD+V+RIEA SEQFDM+MQLDV TEVYPM  GD+FTMV
Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309

Query: 328 LAPTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGL 507
           LAPTL+LDGTPDTG+Y    RK+LADKF+YVMHGKLYKISE+++ G   KVE+YASFGGL
Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369

Query: 508 LMMLKGDPSNAANFELD 558
           LMMLKGDPS+AA+FELD
Sbjct: 370 LMMLKGDPSSAASFELD 386


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  223 bits (567), Expect = 3e-56
 Identities = 106/137 (77%), Positives = 124/137 (90%)
 Frame = +1

Query: 148 RMVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMV 327
           +MVE LFEDIFT+TR++PDGKKFD+V+RIEA SEQFDM+MQLDV TEVYPM  GD+FTMV
Sbjct: 45  KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 104

Query: 328 LAPTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGL 507
           LAPTL+LDGTPDTG+Y    RK+LADKF+YVMHGKLYKISE+++ G   KVE+YASFGGL
Sbjct: 105 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 164

Query: 508 LMMLKGDPSNAANFELD 558
           LMMLKGDPS+AA+FELD
Sbjct: 165 LMMLKGDPSSAASFELD 181


>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Oryza brachyantha]
           gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X2
           [Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X3 [Oryza brachyantha]
           gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X4
           [Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X5 [Oryza brachyantha]
          Length = 146

 Score =  222 bits (566), Expect = 4e-56
 Identities = 107/136 (78%), Positives = 121/136 (88%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           MVE LFEDIFT+TR++PDGKKFD+V+RIEA SEQFDM+MQLDV TEVYPM  GDKFTMVL
Sbjct: 1   MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLL 510
           APTL+LDGTPD G+Y    RK+LADK++YVMHGKLYKISE+ +GG   KVE+YASFGGLL
Sbjct: 61  APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120

Query: 511 MMLKGDPSNAANFELD 558
           MMLKGDPS AANFELD
Sbjct: 121 MMLKGDPSTAANFELD 136


>ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 146

 Score =  213 bits (543), Expect = 2e-53
 Identities = 102/136 (75%), Positives = 117/136 (86%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           M E LFEDIF + R++PDGKKFD+V RIEA SEQF M+MQLDV T VYPM+ GDKFTMVL
Sbjct: 1   MAEHLFEDIFVVNRIDPDGKKFDRVNRIEARSEQFHMYMQLDVATYVYPMHAGDKFTMVL 60

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLL 510
           APTL+LDGTPDTGYY    RK+LADK++YVMHGKLYKISE+++GG   KVE YASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLL 120

Query: 511 MMLKGDPSNAANFELD 558
           M+LKGDPS+AAN ELD
Sbjct: 121 MLLKGDPSSAANLELD 136


>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score =  213 bits (541), Expect = 3e-53
 Identities = 103/136 (75%), Positives = 121/136 (88%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           MVELLFEDIFT+TR++PDGKKFDKV+RIEA SEQFDM+M LDVN +VYP++VG+KF + L
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLL 510
           APTL+LDGTPD GY+  G RKSLADK+EYVM+GKLY +SEE +G  NVKVE+ ASFGGLL
Sbjct: 61  APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGA-NVKVEINASFGGLL 119

Query: 511 MMLKGDPSNAANFELD 558
           M+LKGDPSNA NFELD
Sbjct: 120 MLLKGDPSNAGNFELD 135


>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Oryza brachyantha]
          Length = 147

 Score =  212 bits (540), Expect = 4e-53
 Identities = 102/137 (74%), Positives = 120/137 (87%), Gaps = 1/137 (0%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           M E LFEDIFT+TR++PDGKKFD+V+RIEA +EQ +++MQLDV T+VYPM+ GDKFTMVL
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEE-NAGGPNVKVEMYASFGGL 507
            PTL+LDGTPDTG++    RK+LADK+EYVMHGKLYKISE+    G N KVEMYASFGGL
Sbjct: 61  VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGL 120

Query: 508 LMMLKGDPSNAANFELD 558
           LMMLKGDPS+AANFELD
Sbjct: 121 LMMLKGDPSSAANFELD 137


>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
           [Aegilops tauschii]
          Length = 220

 Score =  209 bits (532), Expect = 4e-52
 Identities = 102/139 (73%), Positives = 121/139 (87%), Gaps = 3/139 (2%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           M E LFEDIF +TR++PDGKKFD+V RIEA SEQ +M+MQLD+ T+VYPM++GDKFTMVL
Sbjct: 1   MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAG---GPNVKVEMYASFG 501
           APTL+LDGTPDTGYY    RK+LADK++YVMHGKLYKISE+N+    GP  KVE+YASFG
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKGP-TKVEIYASFG 119

Query: 502 GLLMMLKGDPSNAANFELD 558
           GLLM+LKGDPS+AAN ELD
Sbjct: 120 GLLMLLKGDPSSAANLELD 138


>ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 144

 Score =  209 bits (532), Expect = 4e-52
 Identities = 101/136 (74%), Positives = 119/136 (87%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           M E LFEDIF ++R++PDGKKFD+V RIEA SEQ  M+MQLDV T+VYPM+ GDKFTMVL
Sbjct: 1   MAEHLFEDIFVVSRIDPDGKKFDRVNRIEARSEQ--MYMQLDVATDVYPMHAGDKFTMVL 58

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLL 510
           APTL+LDGTPDTGYY    RK+LADK++YVMHGKLYKISE+++GG   KVE+YASFGGLL
Sbjct: 59  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVEIYASFGGLL 118

Query: 511 MMLKGDPSNAANFELD 558
           M+LKGDPS+AAN ELD
Sbjct: 119 MLLKGDPSSAANLELD 134


>ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF83949.1| unknown [Zea
           mays] gi|195607894|gb|ACG25777.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195608506|gb|ACG26083.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195611040|gb|ACG27350.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195649823|gb|ACG44379.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195653495|gb|ACG46215.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|238014148|gb|ACR38109.1| unknown [Zea mays]
           gi|413932441|gb|AFW66992.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 1 [Zea mays]
           gi|413932442|gb|AFW66993.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 2 [Zea mays]
           gi|413932443|gb|AFW66994.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 3 [Zea mays]
           gi|413932444|gb|AFW66995.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 4 [Zea mays]
          Length = 146

 Score =  205 bits (521), Expect = 7e-51
 Identities = 96/136 (70%), Positives = 115/136 (84%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           M E LFED F +TR++PDGKKFD+V+R+EA SEQ DM+MQLDV T+VYPM+ G+KF MV+
Sbjct: 1   MSEHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLL 510
           APTL+LDGTPDTGYY    RK+LAD +EYVM GKLYKISE+ +   N KVEMYASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120

Query: 511 MMLKGDPSNAANFELD 558
           M+L+GDPS AA+FELD
Sbjct: 121 MLLRGDPSTAASFELD 136


>ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group]
           gi|29244685|gb|AAO73277.1| putative RNA polymerase
           [Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1|
           putative RNA polymerase [Oryza sativa Japonica Group]
           gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa
           Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical
           protein OsJ_13351 [Oryza sativa Japonica Group]
           gi|215692970|dbj|BAG88390.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 148

 Score =  204 bits (520), Expect = 9e-51
 Identities = 100/138 (72%), Positives = 120/138 (86%), Gaps = 2/138 (1%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           M E LFEDIFT+TR++PDGKKFD+V+RIEA S+QFDM+MQLDV T+VYPM+ GD+FTMVL
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEE-NAGGPNV-KVEMYASFGG 504
            PTL+LDGTPD+ ++    RK+LADK+EYVMHGKLYKISE+ +    N  KVEMYASFGG
Sbjct: 61  VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 120

Query: 505 LLMMLKGDPSNAANFELD 558
           LL+MLKGDPS+AANFELD
Sbjct: 121 LLVMLKGDPSSAANFELD 138


>gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group]
          Length = 215

 Score =  204 bits (520), Expect = 9e-51
 Identities = 100/138 (72%), Positives = 120/138 (86%), Gaps = 2/138 (1%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           M E LFEDIFT+TR++PDGKKFD+V+RIEA S+QFDM+MQLDV T+VYPM+ GD+FTMVL
Sbjct: 68  MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 127

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEE-NAGGPNV-KVEMYASFGG 504
            PTL+LDGTPD+ ++    RK+LADK+EYVMHGKLYKISE+ +    N  KVEMYASFGG
Sbjct: 128 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 187

Query: 505 LLMMLKGDPSNAANFELD 558
           LL+MLKGDPS+AANFELD
Sbjct: 188 LLVMLKGDPSSAANFELD 205


>gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
           [Zea mays]
          Length = 146

 Score =  204 bits (518), Expect = 2e-50
 Identities = 95/136 (69%), Positives = 115/136 (84%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           M + LFED F +TR++PDGKKFD+V+R+EA SEQ DM+MQLDV T+VYPM+ G+KF MV+
Sbjct: 1   MSDHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLL 510
           APTL+LDGTPDTGYY    RK+LAD +EYVM GKLYKISE+ +   N KVEMYASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120

Query: 511 MMLKGDPSNAANFELD 558
           M+L+GDPS AA+FELD
Sbjct: 121 MLLRGDPSTAASFELD 136


>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like isoform 1 [Solanum lycopersicum]
           gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           isoform 2 [Solanum lycopersicum]
          Length = 145

 Score =  201 bits (511), Expect = 1e-49
 Identities = 100/136 (73%), Positives = 115/136 (84%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           MVE LFEDIFT+T+ +PDGKKFD+V RIEA SEQFDM M LDVNTE+YPM V DKF MVL
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLL 510
           A TL+LDGTPDTGY+  G +KSLADKFEYVMHGKLY+ISEE + G +VK +++ SFGGLL
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGS-GKHVKADIFVSFGGLL 119

Query: 511 MMLKGDPSNAANFELD 558
           M L+GDPS AA FELD
Sbjct: 120 MQLRGDPSIAAKFELD 135


>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Solanum tuberosum]
          Length = 145

 Score =  201 bits (510), Expect = 1e-49
 Identities = 99/136 (72%), Positives = 115/136 (84%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           MVE LFEDIFT+T+ +PDGKKFD+V RIEA SEQFDM M LD+NTE+YPM V DKF MVL
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLL 510
           A TL+LDGTPDTGY+  G +KSLADKFEYVMHGKLY+ISEE + G +VK +++ SFGGLL
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGS-GKHVKADIFVSFGGLL 119

Query: 511 MMLKGDPSNAANFELD 558
           M L+GDPS AA FELD
Sbjct: 120 MQLRGDPSIAAKFELD 135


>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
           gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like [Citrus
           sinensis] gi|557545143|gb|ESR56121.1| hypothetical
           protein CICLE_v10022723mg [Citrus clementina]
          Length = 146

 Score =  200 bits (509), Expect = 2e-49
 Identities = 93/133 (69%), Positives = 116/133 (87%)
 Frame = +1

Query: 160 LLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVLAPT 339
           +LFEDIF + +++PDGKKFDKV+RIEAHS+  DM+M LDVN+E+YPM VGDKFTM LA T
Sbjct: 5   VLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHT 64

Query: 340 LSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLLMML 519
           L+LDGTPDTGYY PGARK+LADK+EY+MHGKL+KI +E + G ++K E+Y S+GGLLMML
Sbjct: 65  LNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGS-GKSLKAEIYVSYGGLLMML 123

Query: 520 KGDPSNAANFELD 558
           KGDPS  ++FELD
Sbjct: 124 KGDPSYVSHFELD 136


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score =  198 bits (504), Expect = 7e-49
 Identities = 97/136 (71%), Positives = 110/136 (80%)
 Frame = +1

Query: 151 MVELLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVL 330
           M   LF DIF + +++PDGKKFDKV+RIEA SEQ DM+MQLDVNTE+YPM+ G+KF M L
Sbjct: 1   MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60

Query: 331 APTLSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLL 510
           A TL LDGTPDTGYY    RKSLADKFEYVMHGKLYKISEE + GPNVK  +Y SFGGLL
Sbjct: 61  ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGS-GPNVKGVIYVSFGGLL 119

Query: 511 MMLKGDPSNAANFELD 558
           MML GDP+N A  +LD
Sbjct: 120 MMLSGDPANTAKLDLD 135


>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
           putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
           DNA-directed RNA polymerases I, II, and III 17.1 kDa
           polypeptide, putative [Ricinus communis]
          Length = 146

 Score =  196 bits (499), Expect = 2e-48
 Identities = 94/133 (70%), Positives = 114/133 (85%)
 Frame = +1

Query: 160 LLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVLAPT 339
           +LFEDIF + +++PDGKKFDKV+RIEAHS+  DM M LDVNTE+YPM VGDKFTM LA T
Sbjct: 5   VLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHT 64

Query: 340 LSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLLMML 519
           L+LDGTPDTGYY  GARK+LADK+EY+M+GKLYKISEE + G  VK EM  S+GGLLM+L
Sbjct: 65  LNLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGS-GKAVKAEMLVSYGGLLMLL 123

Query: 520 KGDPSNAANFELD 558
           +GDPS+ ++FELD
Sbjct: 124 RGDPSHVSHFELD 136


>ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Capsella rubella]
           gi|482574468|gb|EOA38655.1| hypothetical protein
           CARUB_v10010575mg [Capsella rubella]
          Length = 146

 Score =  196 bits (498), Expect = 3e-48
 Identities = 90/133 (67%), Positives = 113/133 (84%)
 Frame = +1

Query: 160 LLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVLAPT 339
           ++FEDIF + +++PDGKKFDKVTR+EA S   +M M LDVNTEVYPM VGDKFT+ +APT
Sbjct: 6   IMFEDIFVVNKLDPDGKKFDKVTRVEATSHNLEMFMHLDVNTEVYPMAVGDKFTLAMAPT 65

Query: 340 LSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLLMML 519
           L+LDGTPDTGY+ PGA+K+LADK+EY+MHGKLYKISE +  G   K E+Y SFGGLLM+L
Sbjct: 66  LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISERD--GKTPKAELYVSFGGLLMLL 123

Query: 520 KGDPSNAANFELD 558
           KGDP++ ++FELD
Sbjct: 124 KGDPAHISHFELD 136


>ref|XP_006402674.1| hypothetical protein EUTSA_v10006298mg [Eutrema salsugineum]
           gi|567183404|ref|XP_006402675.1| hypothetical protein
           EUTSA_v10006298mg [Eutrema salsugineum]
           gi|557103773|gb|ESQ44127.1| hypothetical protein
           EUTSA_v10006298mg [Eutrema salsugineum]
           gi|557103774|gb|ESQ44128.1| hypothetical protein
           EUTSA_v10006298mg [Eutrema salsugineum]
          Length = 146

 Score =  195 bits (495), Expect = 7e-48
 Identities = 90/133 (67%), Positives = 113/133 (84%)
 Frame = +1

Query: 160 LLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVLAPT 339
           +LFEDIF + +++PDGKKFDKVTR+EA S   +M M LDVNTEVYPM VGDKFT+ +APT
Sbjct: 6   ILFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTLAMAPT 65

Query: 340 LSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLLMML 519
           L+LDGTPDTGY+ PGA+K+LADK+EYVMHGKLYKI+E +  G   K E+Y SFGGLLM+L
Sbjct: 66  LNLDGTPDTGYFTPGAKKTLADKYEYVMHGKLYKITERD--GKTPKAELYVSFGGLLMLL 123

Query: 520 KGDPSNAANFELD 558
           +GDP++ ++FELD
Sbjct: 124 QGDPAHISHFELD 136


>ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutrema salsugineum]
           gi|557098120|gb|ESQ38556.1| hypothetical protein
           EUTSA_v10029046mg [Eutrema salsugineum]
          Length = 146

 Score =  195 bits (495), Expect = 7e-48
 Identities = 89/133 (66%), Positives = 113/133 (84%)
 Frame = +1

Query: 160 LLFEDIFTLTRVNPDGKKFDKVTRIEAHSEQFDMHMQLDVNTEVYPMNVGDKFTMVLAPT 339
           ++FEDIF + +++PDGKKFDKVTR+EA S   +M M LDVNTEVYPM VGDKFTM +APT
Sbjct: 6   IMFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTMAMAPT 65

Query: 340 LSLDGTPDTGYYNPGARKSLADKFEYVMHGKLYKISEENAGGPNVKVEMYASFGGLLMML 519
           L+LDGTPDTGY+ PGA+K+LADK+EY+MHGKLYKI+E +  G   K E+Y SFGGLLM+L
Sbjct: 66  LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKITERD--GKTPKAELYVSFGGLLMLL 123

Query: 520 KGDPSNAANFELD 558
           +GDP++ ++FELD
Sbjct: 124 QGDPAHISHFELD 136