BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00016263
         (1502 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa...   512   e-142
ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group] g...   512   e-142
gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis] ...   507   e-141
gb|ACG35868.1| replication factor C subunit 3 [Zea mays]              506   e-140
ref|XP_002302226.1| replication factor C 36 kDA family protein [...   505   e-140
ref|XP_006647989.1| PREDICTED: replication factor C subunit 3-li...   505   e-140
ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V...   504   e-140
ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi...   504   e-140
ref|XP_004954087.1| PREDICTED: replication factor C subunit 5-li...   502   e-139
ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-li...   501   e-139
ref|XP_002454641.1| hypothetical protein SORBIDRAFT_04g034710 [S...   501   e-139
gb|EMT26703.1| Replication factor C subunit 5 [Aegilops tauschii]     500   e-139
ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-li...   499   e-139
ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-li...   499   e-138
ref|XP_003570529.1| PREDICTED: replication factor C subunit 5-li...   499   e-138
dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgar...   499   e-138
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-li...   497   e-138
ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citr...   497   e-138
ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-li...   497   e-138
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc...   497   e-138

>dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa Japonica Group]
          Length = 367

 Score =  512 bits (1319), Expect = e-142
 Identities = 272/375 (72%), Positives = 298/375 (79%), Gaps = 1/375 (0%)
 Frame = -2

Query: 1411 ALPPMEIDAXXXXXXXXXPNKGKAVAAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDTIDR 1232
            A  PM+IDA           K    + P  GR APWVEKYRP+SL DVAAHRDI+DTIDR
Sbjct: 6    AATPMDIDAAAPPPGAAAKGKAPLSSTPG-GRAAPWVEKYRPQSLGDVAAHRDIVDTIDR 64

Query: 1231 LTNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQA 1052
            LTNE RLPHLLLYGPPGTGKTSTILAVARKLYG QYG MILELNASDERGI+VVR QIQ 
Sbjct: 65   LTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQD 124

Query: 1051 FASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIPA 875
            FAS  +L  G+K SVK++LLDEADAMTKDAQFALRRVIEK+T++TRFALI N+VNKIIPA
Sbjct: 125  FASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPA 184

Query: 874  LQSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQSTH 695
            LQSRCTRFRFAPLD  ++RERL+ +I +EGLDVD  GL ALVRLSNGDMRKALNILQSTH
Sbjct: 185  LQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTH 244

Query: 694  MANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXXX 515
            MA++ ITEEAVYLCTGNPMPKDIEQI YWLLNESF   ++                    
Sbjct: 245  MASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFK------------CILNYQSI 292

Query: 514  XDIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTLI 335
             D+K RKGLALVDIIREV MFVFKIQMPS VR KL+NDLADIEYRLSF  NDKLQLG LI
Sbjct: 293  SDMKMRKGLALVDIIREVTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALI 352

Query: 334  SCFTNVRCALVAAAN 290
            S FT  R A+VAAA+
Sbjct: 353  STFTGARTAMVAAAH 367


>ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group]
            gi|75132556|sp|Q6YZ54.1|RFC3_ORYSJ RecName:
            Full=Replication factor C subunit 3; Short=OsRFC3;
            AltName: Full=Activator 1 subunit 3
            gi|46805779|dbj|BAD17147.1| putative replication factor C
            36kDa subunit [Oryza sativa Japonica Group]
            gi|46806135|dbj|BAD17365.1| putative replication factor C
            36kDa subunit [Oryza sativa Japonica Group]
            gi|113537811|dbj|BAF10194.1| Os02g0775200 [Oryza sativa
            Japonica Group] gi|215697717|dbj|BAG91711.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218191668|gb|EEC74095.1| hypothetical protein
            OsI_09136 [Oryza sativa Indica Group]
          Length = 361

 Score =  512 bits (1319), Expect = e-142
 Identities = 272/375 (72%), Positives = 298/375 (79%), Gaps = 1/375 (0%)
 Frame = -2

Query: 1411 ALPPMEIDAXXXXXXXXXPNKGKAVAAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDTIDR 1232
            A  PM+IDA           K    + P  GR APWVEKYRP+SL DVAAHRDI+DTIDR
Sbjct: 6    AATPMDIDAAAPPPGAAAKGKAPLSSTPG-GRAAPWVEKYRPQSLGDVAAHRDIVDTIDR 64

Query: 1231 LTNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQA 1052
            LTNE RLPHLLLYGPPGTGKTSTILAVARKLYG QYG MILELNASDERGI+VVR QIQ 
Sbjct: 65   LTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQD 124

Query: 1051 FASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIPA 875
            FAS  +L  G+K SVK++LLDEADAMTKDAQFALRRVIEK+T++TRFALI N+VNKIIPA
Sbjct: 125  FASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPA 184

Query: 874  LQSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQSTH 695
            LQSRCTRFRFAPLD  ++RERL+ +I +EGLDVD  GL ALVRLSNGDMRKALNILQSTH
Sbjct: 185  LQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTH 244

Query: 694  MANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXXX 515
            MA++ ITEEAVYLCTGNPMPKDIEQI YWLLNESF   ++                    
Sbjct: 245  MASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFK------------------CI 286

Query: 514  XDIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTLI 335
             D+K RKGLALVDIIREV MFVFKIQMPS VR KL+NDLADIEYRLSF  NDKLQLG LI
Sbjct: 287  SDMKMRKGLALVDIIREVTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALI 346

Query: 334  SCFTNVRCALVAAAN 290
            S FT  R A+VAAA+
Sbjct: 347  STFTGARTAMVAAAH 361


>gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis]
            gi|587990838|gb|EXC75062.1| Replication factor C subunit
            5 [Morus notabilis]
          Length = 365

 Score =  507 bits (1305), Expect = e-141
 Identities = 267/358 (74%), Positives = 297/358 (82%), Gaps = 4/358 (1%)
 Frame = -2

Query: 1354 NKGKAVAAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDTIDRLTNEGRLPHLLLYGPPGTG 1175
            NKGK+ AAPSDG+  PWVEKYRP+SL+DVAAHRDIIDTIDRLT+E RLPHLLLYGPPGTG
Sbjct: 25   NKGKSGAAPSDGKATPWVEKYRPQSLADVAAHRDIIDTIDRLTSENRLPHLLLYGPPGTG 84

Query: 1174 KTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQAFASTTTL-IGSKASVKLIL 998
            KTSTILAVARKLYG QY  MILELNASD+RGI+VVR QIQ FAST +   G KASVKL+L
Sbjct: 85   KTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVL 144

Query: 997  LDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIPALQSRCTRFRFAPLDSCNIR 818
            LDEADAMTKDAQFALRRVIEKYTKNTRF+LI NNVNKIIPALQSRCTRFRFAPLD  ++ 
Sbjct: 145  LDEADAMTKDAQFALRRVIEKYTKNTRFSLICNNVNKIIPALQSRCTRFRFAPLDPVHVN 204

Query: 817  ERLQFVINAEG---LDVDKSGLEALVRLSNGDMRKALNILQSTHMANQHITEEAVYLCTG 647
            ERL+ VI AEG   LDV +SGL A VRLSNGDMRKALNILQSTHMA++ ITEE VYLCTG
Sbjct: 205  ERLKHVIEAEGQVLLDVSESGLTAFVRLSNGDMRKALNILQSTHMASKKITEEEVYLCTG 264

Query: 646  NPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXXXXDIKARKGLALVDIIR 467
            NP+PKDIEQI+YWLLNESF + ++                     ++K RKGLALVDI+R
Sbjct: 265  NPLPKDIEQISYWLLNESFAESFK------------------QISNMKGRKGLALVDIVR 306

Query: 466  EVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTLISCFTNVRCALVAAA 293
            EV MFVFKI+MPS  R +L+NDLADIEYRLSFG NDKLQLG+LI+ FT  R +LVAAA
Sbjct: 307  EVTMFVFKIKMPSDARVQLINDLADIEYRLSFGCNDKLQLGSLIASFTKARASLVAAA 364


>gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
          Length = 362

 Score =  506 bits (1303), Expect = e-140
 Identities = 271/378 (71%), Positives = 301/378 (79%), Gaps = 2/378 (0%)
 Frame = -2

Query: 1417 SCALPPMEIDAXXXXXXXXXPN-KGKAVAAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDT 1241
            + A  PM+IDA            KGKA+ + + GR APWVEKYRP+SL+DVAAHRDI+DT
Sbjct: 4    TAAAAPMDIDAAAPPPPPPGAAAKGKALLS-AGGRAAPWVEKYRPQSLADVAAHRDIVDT 62

Query: 1240 IDRLTNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQ 1061
            IDRLTNE RLPHLLLYGPPGTGKTSTILAVARKLYG QY  MILELNASDERGI+VVR Q
Sbjct: 63   IDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQQ 122

Query: 1060 IQAFASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKI 884
            IQ FA   +L  G++ SVKL+LLDEADAMTKDAQFALRRVIEKYT++TRFALI N+VNKI
Sbjct: 123  IQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKI 182

Query: 883  IPALQSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQ 704
            IPALQSRCTRFRFAPLD  ++RERLQ +I +EGL VD  GL ALVRLSNGDMRKALNILQ
Sbjct: 183  IPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQ 242

Query: 703  STHMANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXX 524
            STHMA+Q ITEEAVYLCTGNPMPKDIEQI +WLLNE F   ++                 
Sbjct: 243  STHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFK----------------- 285

Query: 523  XXXXDIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLG 344
                D+K RKGLALVDIIREV MFVFKIQMPS VR KL+N+LADIEYRLSF  NDKLQLG
Sbjct: 286  -YISDMKMRKGLALVDIIREVTMFVFKIQMPSDVRVKLINNLADIEYRLSFACNDKLQLG 344

Query: 343  TLISCFTNVRCALVAAAN 290
             LIS FT+ R A+VAAA+
Sbjct: 345  ALISTFTDTRTAMVAAAS 362


>ref|XP_002302226.1| replication factor C 36 kDA family protein [Populus trichocarpa]
            gi|222843952|gb|EEE81499.1| replication factor C 36 kDA
            family protein [Populus trichocarpa]
          Length = 363

 Score =  505 bits (1301), Expect = e-140
 Identities = 271/378 (71%), Positives = 302/378 (79%), Gaps = 4/378 (1%)
 Frame = -2

Query: 1411 ALPPMEIDAXXXXXXXXXPNKGKAV---AAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDT 1241
            A+  M+ID          PNKGK V   A P  G+  PWVEKYRP+SL+DVAAHRDIIDT
Sbjct: 4    AIALMDIDEEENQNHLSKPNKGKKVVVPATPPGGKATPWVEKYRPQSLADVAAHRDIIDT 63

Query: 1240 IDRLTNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQ 1061
            IDRLT+E RLPHLLLYGPPGTGKTSTILAVARKLYG QY  MILELNASD+RGI+VVR Q
Sbjct: 64   IDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRKQ 123

Query: 1060 IQAFASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKI 884
            IQ FAST +   G+KASVKL+LLDEADAMTKDAQFALRRVIEKYTKNTRFALI N+VNKI
Sbjct: 124  IQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI 183

Query: 883  IPALQSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQ 704
            IPALQSRCTRFRFAPLD  ++ ERL+ VI AEGLDV +SGLEAL  LSNGDMRKALNILQ
Sbjct: 184  IPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALNILQ 243

Query: 703  STHMANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXX 524
            STHMA+Q ITEE VYLCTGNP+P+D++QIT+WLLNESF + Y+                 
Sbjct: 244  STHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFAESYK----------------- 286

Query: 523  XXXXDIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLG 344
                +IK RKGLALVDI+REV MFVFKI+M S +R  L+NDLADIEYRLSFG NDKLQLG
Sbjct: 287  -RISEIKTRKGLALVDIVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLG 345

Query: 343  TLISCFTNVRCALVAAAN 290
            +LI+ FT  R ALVAAAN
Sbjct: 346  SLIASFTRARSALVAAAN 363


>ref|XP_006647989.1| PREDICTED: replication factor C subunit 3-like [Oryza brachyantha]
          Length = 362

 Score =  505 bits (1300), Expect = e-140
 Identities = 269/375 (71%), Positives = 295/375 (78%), Gaps = 1/375 (0%)
 Frame = -2

Query: 1411 ALPPMEIDAXXXXXXXXXPNKGKAVAAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDTIDR 1232
            A  PM+IDA          +K      P  GR APWVEKYRP+SL DVAAHRDI+DTIDR
Sbjct: 7    AATPMDIDAAAPPPGAYAKDKAPLSTTPG-GRAAPWVEKYRPQSLGDVAAHRDIVDTIDR 65

Query: 1231 LTNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQA 1052
            LTNE RLPHLLLYGPPGTGKTSTILAVARKLYG QYG MILELNASDERGI+VVR QIQ 
Sbjct: 66   LTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQD 125

Query: 1051 FASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIPA 875
            FAS  +L  G+K SVK++LLDEADAMTKDAQFALRRVIEK+T++TRFALI N+VNKIIPA
Sbjct: 126  FASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPA 185

Query: 874  LQSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQSTH 695
            LQSRCTRFRFAPLD  ++R+RLQ +I +EGLDVD  GL ALVRLSNGDMRKALNILQSTH
Sbjct: 186  LQSRCTRFRFAPLDGTHVRDRLQHIILSEGLDVDDGGLTALVRLSNGDMRKALNILQSTH 245

Query: 694  MANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXXX 515
            MA++ ITEEAVYLCTGNPM KDIEQI +WLLNE F   ++                    
Sbjct: 246  MASKQITEEAVYLCTGNPMQKDIEQIAFWLLNEPFSTSFK------------------CI 287

Query: 514  XDIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTLI 335
             D+K RKGLALVDIIREV MFVFKIQMPS VR KL+NDLADIEYRL F  NDKLQLG LI
Sbjct: 288  SDMKMRKGLALVDIIREVTMFVFKIQMPSDVRIKLINDLADIEYRLCFACNDKLQLGALI 347

Query: 334  SCFTNVRCALVAAAN 290
            S FT  R A+VAAAN
Sbjct: 348  STFTGARSAMVAAAN 362


>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
            gi|302141794|emb|CBI18997.3| unnamed protein product
            [Vitis vinifera]
          Length = 360

 Score =  504 bits (1299), Expect = e-140
 Identities = 265/374 (70%), Positives = 300/374 (80%), Gaps = 1/374 (0%)
 Frame = -2

Query: 1411 ALPPMEIDAXXXXXXXXXPNKGKAVAAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDTIDR 1232
            A+  M+ID            K   V  P D +  PWVEKYRP+SL+DVAAHRDI+DTIDR
Sbjct: 4    AVTVMDIDEEDNHLLKANKGKSVVVGGPPDRKATPWVEKYRPQSLADVAAHRDIVDTIDR 63

Query: 1231 LTNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQA 1052
            LT+E RLPHLLLYGPPGTGKTSTILAVARKLYG+Q+  MILELNASD+RGI+VVR QIQ 
Sbjct: 64   LTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVRQQIQD 123

Query: 1051 FASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIPA 875
            FAST +   G+K+SVKL+LLDEADAMTKDAQFALRRVIEKYTKNTRFALI N+VNKIIPA
Sbjct: 124  FASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPA 183

Query: 874  LQSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQSTH 695
            LQSRCTRFRFAPLD+ ++ ERL+ VINAE LDV +SGL ALVRLS+GDMRKALNILQSTH
Sbjct: 184  LQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNILQSTH 243

Query: 694  MANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXXX 515
            MA+Q ITEEAVYLCTGNP+PKDIEQI+YWLLNESF   +                     
Sbjct: 244  MASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASF------------------DRI 285

Query: 514  XDIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTLI 335
             ++K RKGLALVD++REV MFVFKI+MPS VR +L+NDLADIEYRLSFG NDKLQLG+LI
Sbjct: 286  SEVKMRKGLALVDVVREVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLI 345

Query: 334  SCFTNVRCALVAAA 293
            + FT  R ALVAAA
Sbjct: 346  ASFTRARAALVAAA 359


>ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi|194696262|gb|ACF82215.1|
            unknown [Zea mays] gi|413939151|gb|AFW73702.1|
            replication factor C subunit 3 [Zea mays]
          Length = 362

 Score =  504 bits (1298), Expect = e-140
 Identities = 266/355 (74%), Positives = 292/355 (82%), Gaps = 1/355 (0%)
 Frame = -2

Query: 1351 KGKAVAAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDTIDRLTNEGRLPHLLLYGPPGTGK 1172
            KGKA  + + GR APWVEKYRP+SL+DVAAHRDI+DTIDRLTNE RLPHLLLYGPPGTGK
Sbjct: 27   KGKAPLS-AGGRAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGK 85

Query: 1171 TSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQAFASTTTL-IGSKASVKLILL 995
            TSTILAVARKLYG QY  MILELNASDERGI+VVR QIQ FA   +L  G++ SVKL+LL
Sbjct: 86   TSTILAVARKLYGSQYSNMILELNASDERGIDVVRQQIQDFAGARSLSFGARPSVKLVLL 145

Query: 994  DEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIPALQSRCTRFRFAPLDSCNIRE 815
            DEADAMTKDAQFALRRVIEKYT++TRFALI N+VNKIIPALQSRCTRFRFAPLD  ++RE
Sbjct: 146  DEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGSHVRE 205

Query: 814  RLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQSTHMANQHITEEAVYLCTGNPMP 635
            RLQ +I +EGL VD  GL ALVRLSNGDMRKALNILQSTHMA+Q ITEEAVYLCTGNPMP
Sbjct: 206  RLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPMP 265

Query: 634  KDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXXXXDIKARKGLALVDIIREVYM 455
            KDIEQI +WLLNE F   ++                     D+K RKGLALVDIIREV M
Sbjct: 266  KDIEQIAFWLLNEPFSTSFK------------------YISDMKMRKGLALVDIIREVTM 307

Query: 454  FVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTLISCFTNVRCALVAAAN 290
            FVFKIQMPS VR KL+NDLADIEYRLSF  NDKLQLG LIS FT+ R A+VAAA+
Sbjct: 308  FVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGALISTFTDTRTAMVAAAS 362


>ref|XP_004954087.1| PREDICTED: replication factor C subunit 5-like [Setaria italica]
          Length = 361

 Score =  502 bits (1293), Expect = e-139
 Identities = 271/376 (72%), Positives = 300/376 (79%), Gaps = 3/376 (0%)
 Frame = -2

Query: 1411 ALPPMEIDAXXXXXXXXXPN-KGKA-VAAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDTI 1238
            A  PM++DA            KGKA + AP  GR APWVEKYRP+SL+DVAAHRDI+DTI
Sbjct: 6    AATPMDVDAAAPPPPPAGAAAKGKAPLNAP--GRAAPWVEKYRPQSLADVAAHRDIVDTI 63

Query: 1237 DRLTNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQI 1058
            DRLTNE RLPHLLLYGPPGTGKTSTILAVARKLYG QY  MILELNASDERGI+VVR QI
Sbjct: 64   DRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRLQI 123

Query: 1057 QAFASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKII 881
            Q FA   +L  G++ SVKL+LLDEADAMTKDAQFALRRVIEKYT++TRFALI N+VNKII
Sbjct: 124  QDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKII 183

Query: 880  PALQSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQS 701
            PALQSRCTRFRFAPLD  ++RERLQ +I +EGL VD+ GL ALVRLSNGDMRKALNILQS
Sbjct: 184  PALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDEGGLTALVRLSNGDMRKALNILQS 243

Query: 700  THMANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXX 521
            THMA+Q ITEEAVYLCTGNPMPKDIE+I +WLLNE F   ++                  
Sbjct: 244  THMASQQITEEAVYLCTGNPMPKDIEEIAFWLLNEPFSTSFK------------------ 285

Query: 520  XXXDIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGT 341
               D+K RKGLALVDIIREV MFVFKIQMPS VR KL+NDLADIEYRLSF  NDKLQLG 
Sbjct: 286  HISDMKMRKGLALVDIIREVTMFVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGA 345

Query: 340  LISCFTNVRCALVAAA 293
            LIS FT+ R A+VAA+
Sbjct: 346  LISTFTSARTAMVAAS 361


>ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
          Length = 361

 Score =  501 bits (1291), Expect = e-139
 Identities = 268/375 (71%), Positives = 302/375 (80%), Gaps = 5/375 (1%)
 Frame = -2

Query: 1402 PMEIDAXXXXXXXXXPNKGKAVA----APSDGRGAPWVEKYRPRSLSDVAAHRDIIDTID 1235
            PM+ID          P+KGK+V      P+ G+  PWVEKYRP+SL DVAAHRDI+DTID
Sbjct: 7    PMDID---DHTYTASPDKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVDTID 63

Query: 1234 RLTNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQ 1055
            RLT E RLPHLLLYGPPGTGKTSTILAVARKLYG QY  MILELNASD+RGI+VVR QIQ
Sbjct: 64   RLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQQIQ 123

Query: 1054 AFASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIP 878
             FAST +L  G K+SVKL+LLDEADAMTKDAQFALRRVIEKYTK+TRFALI N+VNKIIP
Sbjct: 124  DFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP 183

Query: 877  ALQSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQST 698
            ALQSRCTRFRFAPLD+ ++ ERL+ VI AEGLDV+ SGL A VRLSNGDMRKALNILQST
Sbjct: 184  ALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKALNILQST 243

Query: 697  HMANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXX 518
            HMA+Q ITEEAVYLCTGNP+PKDIE I+YWLLNE F D ++                   
Sbjct: 244  HMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFK------------------R 285

Query: 517  XXDIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTL 338
              ++K RKGLAL+DI+REV MFVFKI+MPSAVR +L+NDLADIEYRLSFG NDKLQLG++
Sbjct: 286  IDEMKTRKGLALIDIVREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSV 345

Query: 337  ISCFTNVRCALVAAA 293
            I+ FT  R ALVAAA
Sbjct: 346  IASFTRARSALVAAA 360


>ref|XP_002454641.1| hypothetical protein SORBIDRAFT_04g034710 [Sorghum bicolor]
            gi|241934472|gb|EES07617.1| hypothetical protein
            SORBIDRAFT_04g034710 [Sorghum bicolor]
          Length = 362

 Score =  501 bits (1291), Expect = e-139
 Identities = 268/378 (70%), Positives = 300/378 (79%), Gaps = 2/378 (0%)
 Frame = -2

Query: 1417 SCALPPMEIDAXXXXXXXXXPN-KGKAVAAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDT 1241
            + A  PM+IDA            KGKA  + + GR APWVEKYRP+SL+DVAAHRDI+DT
Sbjct: 4    TAAAAPMDIDAAAPPPPPPGAAAKGKAPLS-AGGRAAPWVEKYRPQSLADVAAHRDIVDT 62

Query: 1240 IDRLTNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQ 1061
            IDRLTNE RLPHLLLYGPPGTGKTSTILAVARKLYG QY  MILELNASDERGI+VVR Q
Sbjct: 63   IDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQQ 122

Query: 1060 IQAFASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKI 884
            IQ FA   +L  G++ SVKL+LLDEADAMTKDAQFALRRVIEKYT++TRFALI N+VNKI
Sbjct: 123  IQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKI 182

Query: 883  IPALQSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQ 704
            IPALQSRCTRFRFAPLD  ++RERLQ +I +EGL VD+ GL ALVRLSNGDMRKALNILQ
Sbjct: 183  IPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDEGGLTALVRLSNGDMRKALNILQ 242

Query: 703  STHMANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXX 524
            STHMA+Q ITEEAVYLCTGNPMP DIE+I +WLLNE F   ++                 
Sbjct: 243  STHMASQQITEEAVYLCTGNPMPNDIERIAFWLLNEPFSTSFK----------------- 285

Query: 523  XXXXDIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLG 344
                D+K RKGLALVDIIREV MFVFKI+MPS VR KL+N+LADIEYRLSF  NDKLQLG
Sbjct: 286  -HISDMKMRKGLALVDIIREVTMFVFKIEMPSDVRVKLINNLADIEYRLSFACNDKLQLG 344

Query: 343  TLISCFTNVRCALVAAAN 290
             LIS FT+ R A+VAAA+
Sbjct: 345  ALISAFTDTRTAMVAAAS 362


>gb|EMT26703.1| Replication factor C subunit 5 [Aegilops tauschii]
          Length = 359

 Score =  500 bits (1288), Expect = e-139
 Identities = 269/375 (71%), Positives = 296/375 (78%), Gaps = 2/375 (0%)
 Frame = -2

Query: 1411 ALPPMEIDAXXXXXXXXXPNKGKA-VAAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDTID 1235
            A  PM+IDA           KGKA ++A +  + +PWVEKYRP+SL+DVAAHRDI+DTID
Sbjct: 6    AAAPMDIDAAAVRPA----TKGKATLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDTID 61

Query: 1234 RLTNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQ 1055
            RLT+E RLPHLLLYGPPGTGKTSTILAVARK+YG QYG MILELNASDERGI VVR QIQ
Sbjct: 62   RLTDENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQ 121

Query: 1054 AFASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIP 878
             FAS  +L  G+K +VKL+LLDEADAMTKDAQFALRRVIEKYT++TRFALI N+VNKIIP
Sbjct: 122  DFASAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIP 181

Query: 877  ALQSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQST 698
            ALQSRCTRFRFAPLD  N+ ERLQ VI +EGLDVDK GL ALVRLSNGDMRKALNILQST
Sbjct: 182  ALQSRCTRFRFAPLDGTNVSERLQHVIKSEGLDVDKGGLTALVRLSNGDMRKALNILQST 241

Query: 697  HMANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXX 518
            HMA+  ITEEAVYLCTGNPMPKDIEQI  WLLNE F   ++                   
Sbjct: 242  HMASSQITEEAVYLCTGNPMPKDIEQIASWLLNEPFSTSFK------------------Y 283

Query: 517  XXDIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTL 338
              D K RKGLAL+DIIREV MFVFKI MPS VR KL+NDLADIEYRL+F  NDKLQLG L
Sbjct: 284  ISDTKMRKGLALIDIIREVTMFVFKINMPSNVRVKLINDLADIEYRLTFACNDKLQLGAL 343

Query: 337  ISCFTNVRCALVAAA 293
            IS FT  R A+VAAA
Sbjct: 344  ISTFTTARTAMVAAA 358


>ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-like [Cucumis sativus]
            gi|449499057|ref|XP_004160708.1| PREDICTED: replication
            factor C subunit 5-like [Cucumis sativus]
          Length = 363

 Score =  499 bits (1286), Expect = e-139
 Identities = 262/373 (70%), Positives = 300/373 (80%), Gaps = 4/373 (1%)
 Frame = -2

Query: 1399 MEIDAXXXXXXXXXPNKGKAVAAPS---DGRGAPWVEKYRPRSLSDVAAHRDIIDTIDRL 1229
            M+ID            KGK VA+P+   +G+  PWVEK+RP+SL+DVAAHRDI+DTID+L
Sbjct: 8    MDIDDDNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDIVDTIDKL 67

Query: 1228 TNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQAF 1049
            T+E RLPHLLLYGPPGTGKTSTILAVARKLYG  Y  MILELNASD+RGI+VVR QIQ F
Sbjct: 68   TSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVVRQQIQDF 127

Query: 1048 ASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIPAL 872
            AST +   G+KASVKL+LLDEADAMTKDAQFALRRVIEKYTKNTRFALI N+VNKIIPAL
Sbjct: 128  ASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPAL 187

Query: 871  QSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQSTHM 692
            QSRCTRFRFAPLD+ ++ ERL++VI AE LDV + GL ALVRL  GDMRKALNILQSTHM
Sbjct: 188  QSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCTGDMRKALNILQSTHM 247

Query: 691  ANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXXXX 512
            A+QHITEEAVYLCTGNPMPKDIEQI++WLLNE F D ++                     
Sbjct: 248  ASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFK------------------RIS 289

Query: 511  DIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTLIS 332
            +IK RKGLALVDI+REV +FVFKI+MPS +R +L+NDLADIEYR++FG NDKLQLG+LIS
Sbjct: 290  EIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQLINDLADIEYRMTFGCNDKLQLGSLIS 349

Query: 331  CFTNVRCALVAAA 293
             FT  R ALV AA
Sbjct: 350  SFTGARSALVGAA 362


>ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-like isoform X1 [Cicer
            arietinum]
          Length = 363

 Score =  499 bits (1285), Expect = e-138
 Identities = 271/375 (72%), Positives = 300/375 (80%), Gaps = 5/375 (1%)
 Frame = -2

Query: 1402 PMEIDAXXXXXXXXXPNKGKAV-AAPSD---GRGAPWVEKYRPRSLSDVAAHRDIIDTID 1235
            PM+ID           +KGK V +AP+    G+   WVEKYRP+SL DVAAHRDI+DTID
Sbjct: 8    PMDIDQTNSFSSNP--DKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDTID 65

Query: 1234 RLTNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQ 1055
            RLT E RLPHLLLYGPPGTGKTSTILAVARKLYG QY  MILELNASD+RGI+VVR QIQ
Sbjct: 66   RLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQ 125

Query: 1054 AFASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIP 878
             FAST +L  G K SVKLILLDEADAMTKDAQFALRRVIEKYTK+TRFALI N+VNKII 
Sbjct: 126  DFASTQSLSFGVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIQ 185

Query: 877  ALQSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQST 698
            ALQSRCTRFRFAPLD+ ++ ERL+ VI AEGLDV  SGL ALVRLSNGDMRKALNILQST
Sbjct: 186  ALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQST 245

Query: 697  HMANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXX 518
            HMA+Q ITEEAVYLCTGNP+PKDIEQI+YWLLNE + D Y+                   
Sbjct: 246  HMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYK------------------R 287

Query: 517  XXDIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTL 338
              DIK RKGLAL+DI+REV MFVFKI+MP+AVR +LVNDLADIEYRLSFG NDKLQLG++
Sbjct: 288  IHDIKTRKGLALIDIVREVTMFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSV 347

Query: 337  ISCFTNVRCALVAAA 293
            I+ FT  R ALVAAA
Sbjct: 348  IASFTRARSALVAAA 362


>ref|XP_003570529.1| PREDICTED: replication factor C subunit 5-like [Brachypodium
            distachyon]
          Length = 358

 Score =  499 bits (1285), Expect = e-138
 Identities = 265/373 (71%), Positives = 301/373 (80%), Gaps = 2/373 (0%)
 Frame = -2

Query: 1402 PMEIDAXXXXXXXXXPNKGKA-VAAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDTIDRLT 1226
            PM+IDA          +KGKA ++A +  R +PWVEKYRP+SL+DVAAHRDI+DTIDRLT
Sbjct: 9    PMDIDAAAPPH-----SKGKAPLSAAAAVRSSPWVEKYRPQSLADVAAHRDIVDTIDRLT 63

Query: 1225 NEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQAFA 1046
            +E RLPHLLLYGPPGTGKTSTILAVARK+YG QYG MILELNASDERGI VVR QIQ FA
Sbjct: 64   DENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQDFA 123

Query: 1045 STTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIPALQ 869
            S  +L  G+K +VKL+LLDEADAMTKDAQFALRRVIEKYT++TRFALI N+VNKIIPALQ
Sbjct: 124  SAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQ 183

Query: 868  SRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQSTHMA 689
            SRCTRFRFAPLD  ++ ERLQ +I +EGLDVD+ GL ALVRLS+GDMRKALNILQSTHMA
Sbjct: 184  SRCTRFRFAPLDGSHVSERLQHIIKSEGLDVDEGGLTALVRLSSGDMRKALNILQSTHMA 243

Query: 688  NQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXXXXD 509
            +Q ITEEAVYLCTGNPMPKDIEQI +WLLNE F   ++                     D
Sbjct: 244  SQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFK------------------YISD 285

Query: 508  IKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTLISC 329
            +K RKGLAL+DIIREV MFVFKI+MP  VR KL+NDLADIEYRL+F  NDKLQLG LIS 
Sbjct: 286  MKMRKGLALIDIIREVTMFVFKIKMPCNVRVKLINDLADIEYRLTFACNDKLQLGALIST 345

Query: 328  FTNVRCALVAAAN 290
            FT+ R A+VAAA+
Sbjct: 346  FTSARTAMVAAAD 358


>dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326531584|dbj|BAJ97796.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 359

 Score =  499 bits (1284), Expect = e-138
 Identities = 264/376 (70%), Positives = 301/376 (80%), Gaps = 2/376 (0%)
 Frame = -2

Query: 1411 ALPPMEIDAXXXXXXXXXPNKGKA-VAAPSDGRGAPWVEKYRPRSLSDVAAHRDIIDTID 1235
            A  PM+ID            KGKA ++A +  + +PWVEKYRP+SL+DVAAHRDI+DTID
Sbjct: 6    AAAPMDIDGAAAPPAF----KGKAPLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDTID 61

Query: 1234 RLTNEGRLPHLLLYGPPGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQ 1055
            RLT+E RLPHLLLYGPPGTGKTSTILAVARK+YG QYG MILELNASDERGI VVR QIQ
Sbjct: 62   RLTDENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQ 121

Query: 1054 AFASTTTL-IGSKASVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIP 878
             FAS  +L  G+K +VKL+LLDEADAMTKDAQFALRRVIEKYT++TRFALI N+VNKIIP
Sbjct: 122  DFASAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIP 181

Query: 877  ALQSRCTRFRFAPLDSCNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQST 698
            ALQSRCTRFRFAPLD  ++ ERL+ +I +EGLDVD+ GL ALVRLSNGDMRK+LNILQST
Sbjct: 182  ALQSRCTRFRFAPLDGSHVSERLRHIIKSEGLDVDEGGLSALVRLSNGDMRKSLNILQST 241

Query: 697  HMANQHITEEAVYLCTGNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXX 518
            HMA+Q ITEEAVYLCTGNPMPKDIEQI +WLLNE F   ++                   
Sbjct: 242  HMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFK------------------H 283

Query: 517  XXDIKARKGLALVDIIREVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTL 338
              D+K RKGLAL+DIIREV MFVFKI+MPS+VR KL+NDLADIEYRL+F  NDKLQLG L
Sbjct: 284  IADMKMRKGLALIDIIREVTMFVFKIKMPSSVRVKLINDLADIEYRLTFACNDKLQLGAL 343

Query: 337  ISCFTNVRCALVAAAN 290
            IS FT  R A+VAAA+
Sbjct: 344  ISTFTTARTAMVAAAD 359


>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-like [Citrus sinensis]
          Length = 364

 Score =  497 bits (1280), Expect = e-138
 Identities = 260/347 (74%), Positives = 289/347 (83%), Gaps = 1/347 (0%)
 Frame = -2

Query: 1330 PSDGRGAPWVEKYRPRSLSDVAAHRDIIDTIDRLTNEGRLPHLLLYGPPGTGKTSTILAV 1151
            P D + +PWVEKYRP+SL+DVAAHRDI+DTIDRLT+E RLPHLLLYGPPGTGKTSTILAV
Sbjct: 35   PPDIKASPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAV 94

Query: 1150 ARKLYGDQYGQMILELNASDERGINVVRDQIQAFASTTTL-IGSKASVKLILLDEADAMT 974
            ARKLYG QY  MILELNASD+RGI+VVR QIQ FAST +   G KASVKL+LLDEADAMT
Sbjct: 95   ARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMT 154

Query: 973  KDAQFALRRVIEKYTKNTRFALIGNNVNKIIPALQSRCTRFRFAPLDSCNIRERLQFVIN 794
            KDAQFALRRVIEKYTKNTRFALI N VNKIIPALQSRCTRFRFAPL+  ++ ERL+ VI 
Sbjct: 155  KDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIE 214

Query: 793  AEGLDVDKSGLEALVRLSNGDMRKALNILQSTHMANQHITEEAVYLCTGNPMPKDIEQIT 614
            AEGLDV + GL ALVRL NGDMRKALNILQSTHMA+Q ITEEAVYLCTGNP+PKDIEQI+
Sbjct: 215  AEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQIS 274

Query: 613  YWLLNESFKDGYRXXXXXXXXXXXXXXXXXXXXXDIKARKGLALVDIIREVYMFVFKIQM 434
            YWLLNESF D ++                     ++K RKGLALVDI+REV MFVFKI+M
Sbjct: 275  YWLLNESFADSFK------------------RISEMKMRKGLALVDIVREVTMFVFKIKM 316

Query: 433  PSAVREKLVNDLADIEYRLSFGSNDKLQLGTLISCFTNVRCALVAAA 293
            PS VR +L+NDLADIEYRLSFG NDKLQLG++IS FT  R A+VAAA
Sbjct: 317  PSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVAAA 363


>ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
            gi|557536359|gb|ESR47477.1| hypothetical protein
            CICLE_v10001597mg [Citrus clementina]
          Length = 364

 Score =  497 bits (1280), Expect = e-138
 Identities = 260/347 (74%), Positives = 289/347 (83%), Gaps = 1/347 (0%)
 Frame = -2

Query: 1330 PSDGRGAPWVEKYRPRSLSDVAAHRDIIDTIDRLTNEGRLPHLLLYGPPGTGKTSTILAV 1151
            P D + +PWVEKYRP+SL+DVAAHRDI+DTIDRLT+E RLPHLLLYGPPGTGKTSTILAV
Sbjct: 35   PPDIKASPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAV 94

Query: 1150 ARKLYGDQYGQMILELNASDERGINVVRDQIQAFASTTTL-IGSKASVKLILLDEADAMT 974
            ARKLYG QY  MILELNASD+RGI+VVR QIQ FAST +   G KASVKL+LLDEADAMT
Sbjct: 95   ARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMT 154

Query: 973  KDAQFALRRVIEKYTKNTRFALIGNNVNKIIPALQSRCTRFRFAPLDSCNIRERLQFVIN 794
            KDAQFALRRVIEKYTKNTRFALI N VNKIIPALQSRCTRFRFAPL+  ++ ERL+ VI 
Sbjct: 155  KDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIE 214

Query: 793  AEGLDVDKSGLEALVRLSNGDMRKALNILQSTHMANQHITEEAVYLCTGNPMPKDIEQIT 614
            AEGLDV + GL ALVRL NGDMRKALNILQSTHMA+Q ITEEAVYLCTGNP+PKDIEQI+
Sbjct: 215  AEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQIS 274

Query: 613  YWLLNESFKDGYRXXXXXXXXXXXXXXXXXXXXXDIKARKGLALVDIIREVYMFVFKIQM 434
            YWLLNESF D ++                     ++K RKGLALVDI+REV MFVFKI+M
Sbjct: 275  YWLLNESFADSFK------------------RISEMKMRKGLALVDIVREVTMFVFKIKM 316

Query: 433  PSAVREKLVNDLADIEYRLSFGSNDKLQLGTLISCFTNVRCALVAAA 293
            PS VR +L+NDLADIEYRLSFG NDKLQLG++IS FT  R A+VAAA
Sbjct: 317  PSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVAAA 363


>ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
          Length = 363

 Score =  497 bits (1280), Expect = e-138
 Identities = 262/359 (72%), Positives = 295/359 (82%), Gaps = 5/359 (1%)
 Frame = -2

Query: 1354 NKGKAVAAPSD----GRGAPWVEKYRPRSLSDVAAHRDIIDTIDRLTNEGRLPHLLLYGP 1187
            +K K+V   S+    G+  PWVEKYRP SL DVAAHRDI+DTIDRLT E RLPHLLLYGP
Sbjct: 22   DKAKSVVVASNPAAAGKAIPWVEKYRPLSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGP 81

Query: 1186 PGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQAFASTTTL-IGSKASV 1010
            PGTGKTSTILAVARKLYG QY  MILELNASD+RGI+VVR QIQ FAST +L  G K+SV
Sbjct: 82   PGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKSSV 141

Query: 1009 KLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIPALQSRCTRFRFAPLDS 830
            KL+LLDEADAMTKDAQFALRRVIEKYTK+TRFALI N+VNKIIPALQSRCTRFRFAPLD+
Sbjct: 142  KLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDA 201

Query: 829  CNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQSTHMANQHITEEAVYLCT 650
             ++ ERL+ VI AEGLDV+ SGL ALVRLSNGDMRKALNILQSTHMA+Q ITEE VYLCT
Sbjct: 202  VHVTERLKHVIKAEGLDVEDSGLAALVRLSNGDMRKALNILQSTHMASQQITEETVYLCT 261

Query: 649  GNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXXXXDIKARKGLALVDII 470
            GNP+PKDIEQI+YWLLNE F D ++                     ++K RKGLALVDI+
Sbjct: 262  GNPLPKDIEQISYWLLNEQFADSFK------------------RIDEMKTRKGLALVDIV 303

Query: 469  REVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTLISCFTNVRCALVAAA 293
            REV +FVFKI+MPSAVR +L+NDLADIEYRLSFG NDKLQLG++I+ F+  R ALVAAA
Sbjct: 304  REVTLFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFSRARSALVAAA 362


>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
            gi|355491087|gb|AES72290.1| Replication factor C subunit
            [Medicago truncatula]
          Length = 355

 Score =  497 bits (1279), Expect = e-138
 Identities = 262/359 (72%), Positives = 294/359 (81%), Gaps = 5/359 (1%)
 Frame = -2

Query: 1354 NKGKAVAAPSD----GRGAPWVEKYRPRSLSDVAAHRDIIDTIDRLTNEGRLPHLLLYGP 1187
            +KGK V A  +    G+ + WVEKYRP+SL DVAAHRDI+DTIDRLT E RLPHLLLYGP
Sbjct: 14   DKGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGP 73

Query: 1186 PGTGKTSTILAVARKLYGDQYGQMILELNASDERGINVVRDQIQAFASTTTL-IGSKASV 1010
            PGTGKTSTILAVARKLYG QY  MILELNASD+RGI+VVR QIQ FAST +L  G K SV
Sbjct: 74   PGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKPSV 133

Query: 1009 KLILLDEADAMTKDAQFALRRVIEKYTKNTRFALIGNNVNKIIPALQSRCTRFRFAPLDS 830
            KL+LLDEADAMTKDAQFALRRVIEKYTK+TRFALI N+VNKIIPALQSRCTRFRFAPLD+
Sbjct: 134  KLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDA 193

Query: 829  CNIRERLQFVINAEGLDVDKSGLEALVRLSNGDMRKALNILQSTHMANQHITEEAVYLCT 650
             ++ ERL+ VINAE LDV  SGL ALVRLSNGDMRKALNILQSTHMA+Q ITEEAVYLCT
Sbjct: 194  VHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCT 253

Query: 649  GNPMPKDIEQITYWLLNESFKDGYRXXXXXXXXXXXXXXXXXXXXXDIKARKGLALVDII 470
            GNP+PKDIEQI+YWLLNE + + ++                     D+K RKGLAL+DI+
Sbjct: 254  GNPLPKDIEQISYWLLNEQYSESFK------------------RIYDMKTRKGLALIDIV 295

Query: 469  REVYMFVFKIQMPSAVREKLVNDLADIEYRLSFGSNDKLQLGTLISCFTNVRCALVAAA 293
            REV MFVFKI MPSAVR +LVNDLADIEYRLSFG NDKLQLG++++ FT  R A+VAAA
Sbjct: 296  REVTMFVFKINMPSAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVASFTRARSAMVAAA 354