BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00015483
         (471 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002988954.1| hypothetical protein SELMODRAFT_128885 [Sela...    96   4e-18
tpg|DAA62512.1| TPA: DNA-directed RNA polymerase III subunit pol...    95   1e-17
ref|XP_003563135.1| PREDICTED: DNA-directed RNA polymerase III s...    95   1e-17
gb|ACR34942.1| unknown [Zea mays]                                      95   1e-17
ref|NP_001147612.1| DNA-directed RNA polymerase III subunit 22.9...    95   1e-17
gb|EMS65056.1| hypothetical protein TRIUR3_25018 [Triticum urartu]     93   4e-17
gb|EMT04694.1| DNA-directed RNA polymerase III subunit RPC8 [Aeg...    92   5e-17
dbj|BAK08181.1| predicted protein [Hordeum vulgare subsp. vulgare]     92   5e-17
gb|EMT18324.1| DNA-directed RNA polymerase III subunit RPC8 [Aeg...    92   7e-17
gb|EMS46002.1| DNA-directed RNA polymerase III subunit RPC8 [Tri...    92   7e-17
ref|XP_001751839.1| predicted protein [Physcomitrella patens] gi...    92   9e-17
ref|XP_003580811.1| PREDICTED: DNA-directed RNA polymerase III s...    91   1e-16
ref|XP_006657688.1| PREDICTED: DNA-directed RNA polymerase III s...    91   2e-16
ref|XP_002460684.1| hypothetical protein SORBIDRAFT_02g033110 [S...    91   2e-16
ref|NP_001059628.1| Os07g0477000 [Oryza sativa Japonica Group] g...    89   6e-16
gb|EEE67155.1| hypothetical protein OsJ_24224 [Oryza sativa Japo...    89   6e-16
ref|XP_004957678.1| PREDICTED: DNA-directed RNA polymerase III s...    86   7e-15
ref|XP_004288119.1| PREDICTED: DNA-directed RNA polymerase III s...    79   6e-13
ref|XP_002986984.1| hypothetical protein SELMODRAFT_235152 [Sela...    79   6e-13
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...    75   9e-12

>ref|XP_002988954.1| hypothetical protein SELMODRAFT_128885 [Selaginella moellendorffii]
           gi|300143291|gb|EFJ09983.1| hypothetical protein
           SELMODRAFT_128885 [Selaginella moellendorffii]
          Length = 187

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 38/65 (58%), Positives = 54/65 (83%)
 Frame = +1

Query: 7   NDGIWVWKHECGDLSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGDGLG 186
           N+ +WVW ++  ++ +DL EEVRFRV  V+YPPIP++Q+ +A+PFAPME+IG+I  DGLG
Sbjct: 123 NEKLWVWNYQENEMFMDLEEEVRFRVLKVRYPPIPLEQERDAQPFAPMEVIGDINSDGLG 182

Query: 187 LLSWW 201
           L+SWW
Sbjct: 183 LVSWW 187


>tpg|DAA62512.1| TPA: DNA-directed RNA polymerase III subunit polypeptide [Zea mays]
          Length = 290

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 44/68 (64%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           RG DG W+ K E GD L LDL++E+RF V++ KYPPIPIDQ+E+  PFAPM+I+G I GD
Sbjct: 208 RGPDGRWMLKTELGDELYLDLDDEIRFLVSSTKYPPIPIDQNEDDPPFAPMQIVGSIKGD 267

Query: 178 GLGLLSWW 201
           GLGLL WW
Sbjct: 268 GLGLLVWW 275


>ref|XP_003563135.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Brachypodium distachyon]
          Length = 200

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 42/68 (61%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           RG DG W+ K + GD L LD+++E+RF V+ +KYPPIP++Q E+ KPFAPM+IIG I GD
Sbjct: 120 RGEDGRWMLKTDDGDELYLDIDDEIRFLVSGIKYPPIPVEQKEDDKPFAPMQIIGSIKGD 179

Query: 178 GLGLLSWW 201
           GLGLL+WW
Sbjct: 180 GLGLLAWW 187


>gb|ACR34942.1| unknown [Zea mays]
          Length = 202

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 44/68 (64%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           RG DG W+ K E GD L LDL++E+RF V++ KYPPIPIDQ+E+  PFAPM+I+G I GD
Sbjct: 120 RGPDGRWMLKTELGDELYLDLDDEIRFLVSSTKYPPIPIDQNEDDPPFAPMQIVGSIKGD 179

Query: 178 GLGLLSWW 201
           GLGLL WW
Sbjct: 180 GLGLLVWW 187


>ref|NP_001147612.1| DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide [Zea
           mays] gi|195612502|gb|ACG28081.1| DNA-directed RNA
           polymerase III subunit 22.9 kDa polypeptide [Zea mays]
          Length = 202

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 44/68 (64%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           RG DG W+ K E GD L LDL++E+RF V++ KYPPIPIDQ+E+  PFAPM+I+G I GD
Sbjct: 120 RGPDGRWMLKTELGDELYLDLDDEIRFLVSSTKYPPIPIDQNEDDPPFAPMQIVGSIKGD 179

Query: 178 GLGLLSWW 201
           GLGLL WW
Sbjct: 180 GLGLLVWW 187


>gb|EMS65056.1| hypothetical protein TRIUR3_25018 [Triticum urartu]
          Length = 177

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 41/68 (60%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           RG DG W  K E GD L LD+++E+RF V+++KYPPIP++Q E+ KPFAPM+I G I GD
Sbjct: 87  RGEDGRWALKTEDGDELHLDIDDEIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGD 146

Query: 178 GLGLLSWW 201
           GLGL++WW
Sbjct: 147 GLGLIAWW 154


>gb|EMT04694.1| DNA-directed RNA polymerase III subunit RPC8 [Aegilops tauschii]
          Length = 271

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 42/68 (61%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           RG DG W  K E GD L LD ++E+RF V+++KYPPIP++Q E+ KPFAPM+I G I GD
Sbjct: 183 RGEDGRWALKTEDGDELHLDTDDEIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGD 242

Query: 178 GLGLLSWW 201
           GLGLL+WW
Sbjct: 243 GLGLLAWW 250


>dbj|BAK08181.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 210

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 41/68 (60%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           RG DG W  K E GD L LD+++E+RF V+++KYPPIP++Q E+ +PFAPM+I G I GD
Sbjct: 120 RGEDGRWALKTEDGDELPLDIDDEIRFLVSSIKYPPIPVEQKEDDRPFAPMQINGSIKGD 179

Query: 178 GLGLLSWW 201
           GLGLL+WW
Sbjct: 180 GLGLLAWW 187


>gb|EMT18324.1| DNA-directed RNA polymerase III subunit RPC8 [Aegilops tauschii]
          Length = 223

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 41/68 (60%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           RG DG W  K E GD L LD+++E+RF  +++KYPPIP++Q E+ KPFAPM+I G I GD
Sbjct: 109 RGEDGRWALKTEDGDELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGD 168

Query: 178 GLGLLSWW 201
           GLGLL+WW
Sbjct: 169 GLGLLAWW 176


>gb|EMS46002.1| DNA-directed RNA polymerase III subunit RPC8 [Triticum urartu]
          Length = 200

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 41/68 (60%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           RG DG W  K E GD L LD+++E+RF  +++KYPPIP++Q E+ KPFAPM+I G I GD
Sbjct: 108 RGEDGRWALKTEDGDELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGD 167

Query: 178 GLGLLSWW 201
           GLGLL+WW
Sbjct: 168 GLGLLAWW 175


>ref|XP_001751839.1| predicted protein [Physcomitrella patens]
           gi|162696937|gb|EDQ83274.1| predicted protein
           [Physcomitrella patens]
          Length = 189

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 36/62 (58%), Positives = 50/62 (80%)
 Frame = +1

Query: 16  IWVWKHECGDLSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGDGLGLLS 195
           +W+W +   D+ +DL E+VRFRV  VKYPPIPI+Q+++A+PFAPM I G+I  DGLGL++
Sbjct: 127 LWIWNYNGADMFMDLEEDVRFRVVQVKYPPIPIEQEKDARPFAPMAITGDINADGLGLVA 186

Query: 196 WW 201
           WW
Sbjct: 187 WW 188


>ref|XP_003580811.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Brachypodium distachyon]
          Length = 200

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 42/68 (61%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           RG DG W+ K E  D L LDL++E+RF V ++KYPPIP++Q E+ KPFAPM+I G I GD
Sbjct: 120 RGEDGRWMLKTEDDDELYLDLDDEIRFLVASIKYPPIPVEQKEDDKPFAPMQINGSIKGD 179

Query: 178 GLGLLSWW 201
           GLGLL+WW
Sbjct: 180 GLGLLAWW 187


>ref|XP_006657688.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Oryza
           brachyantha]
          Length = 200

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 41/68 (60%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           R +DG W+ K E GD L LD ++E+RF V+++KYPPIP++Q E   PFAPM+IIG I GD
Sbjct: 120 RASDGRWMLKTEDGDELYLDTDDEIRFLVSSIKYPPIPVEQKETDSPFAPMQIIGSIKGD 179

Query: 178 GLGLLSWW 201
           GLGLL+WW
Sbjct: 180 GLGLLAWW 187


>ref|XP_002460684.1| hypothetical protein SORBIDRAFT_02g033110 [Sorghum bicolor]
           gi|241924061|gb|EER97205.1| hypothetical protein
           SORBIDRAFT_02g033110 [Sorghum bicolor]
          Length = 202

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 43/68 (63%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           RG DG W+ K E GD L LDL++E+RF V++ KYP IPIDQ E+  PFAPM+I+G I GD
Sbjct: 120 RGPDGRWMLKTEDGDELYLDLDDEIRFLVSSTKYPRIPIDQKEDDPPFAPMQIVGSIKGD 179

Query: 178 GLGLLSWW 201
           GLGLL+WW
Sbjct: 180 GLGLLAWW 187


>ref|NP_001059628.1| Os07g0477000 [Oryza sativa Japonica Group]
           gi|29837202|dbj|BAC75582.1| putative DNA-directed RNA
           polymerase III subunit 22.9 kDa polypeptide [Oryza
           sativa Japonica Group] gi|113611164|dbj|BAF21542.1|
           Os07g0477000 [Oryza sativa Japonica Group]
           gi|215765537|dbj|BAG87234.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218199590|gb|EEC82017.1| hypothetical protein
           OsI_25976 [Oryza sativa Indica Group]
          Length = 202

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 41/68 (60%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           R  DG W+ K E GD L LDL++E+RF V+++KYPPIP++Q E  + FAPM+IIG I GD
Sbjct: 120 RALDGRWMLKTEDGDELYLDLDDEIRFLVSSIKYPPIPVEQKETDRAFAPMQIIGSIKGD 179

Query: 178 GLGLLSWW 201
           GLGLL+WW
Sbjct: 180 GLGLLAWW 187


>gb|EEE67155.1| hypothetical protein OsJ_24224 [Oryza sativa Japonica Group]
          Length = 365

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 41/68 (60%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           R  DG W+ K E GD L LDL++E+RF V+++KYPPIP++Q E  + FAPM+IIG I GD
Sbjct: 283 RALDGRWMLKTEDGDELYLDLDDEIRFLVSSIKYPPIPVEQKETDRAFAPMQIIGSIKGD 342

Query: 178 GLGLLSWW 201
           GLGLL+WW
Sbjct: 343 GLGLLAWW 350


>ref|XP_004957678.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc8-like
           isoform X2 [Setaria italica]
          Length = 200

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RGNDGIWVWKHECGD-LSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGD 177
           RG DG W+ + E  D L LDL++E+RF V+  KYPPIPI+Q  +  PF+PM+I+G I GD
Sbjct: 120 RGPDGRWMLRTEDNDELYLDLDDEIRFLVSGTKYPPIPIEQKADDPPFSPMQIVGSIKGD 179

Query: 178 GLGLLSWW 201
           GLGLL+WW
Sbjct: 180 GLGLLAWW 187


>ref|XP_004288119.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Fragaria vesca subsp. vesca]
          Length = 198

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 33/64 (51%), Positives = 46/64 (71%)
 Frame = +1

Query: 16  IWVWKHECGDLSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGDGLGLLS 195
           +W WK    +L + L +++RF+V +V YP IPI+Q EN+KPFAPME+ G I  DGLG + 
Sbjct: 130 LWYWKPFDDELPIYLKDQIRFQVESVNYPKIPIEQPENSKPFAPMEVKGSIDFDGLGPVQ 189

Query: 196 WWED 207
           WW+D
Sbjct: 190 WWQD 193


>ref|XP_002986984.1| hypothetical protein SELMODRAFT_235152 [Selaginella moellendorffii]
           gi|300145389|gb|EFJ12066.1| hypothetical protein
           SELMODRAFT_235152 [Selaginella moellendorffii]
          Length = 155

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 32/47 (68%), Positives = 42/47 (89%)
 Frame = +1

Query: 61  NEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGDGLGLLSWW 201
           N+EVRFRV  V+YPPIP++Q+ +A+PFAPME+IG+I  DGLGL+SWW
Sbjct: 109 NQEVRFRVLKVRYPPIPLEQERDAQPFAPMEVIGDINSDGLGLVSWW 155


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 30/62 (48%), Positives = 45/62 (72%)
 Frame = +1

Query: 16  IWVWKHECGDLSLDLNEEVRFRVTAVKYPPIPIDQDENAKPFAPMEIIGEICGDGLGLLS 195
           IW+W ++     +D  +E+RF+V +V YPPIP++Q + +KPFAPM I+G +  DGLG +S
Sbjct: 131 IWIWDYQEQKFPIDGIDEIRFQVQSVSYPPIPVEQPKESKPFAPMVIMGSLDYDGLGPVS 190

Query: 196 WW 201
           WW
Sbjct: 191 WW 192