BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00014431
         (1337 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC04958.1| Transcription initiation factor TFIID subunit 12 ...   357   6e-96
ref|XP_004303683.1| PREDICTED: uncharacterized protein LOC101296...   357   6e-96
ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248...   357   8e-96
gb|EMJ18178.1| hypothetical protein PRUPE_ppa002765mg [Prunus pe...   354   5e-95
ref|XP_006426645.1| hypothetical protein CICLE_v10025234mg [Citr...   353   1e-94
gb|ADL36631.1| C2H2L domain class transcription factor [Malus do...   352   3e-94
ref|NP_001275310.1| transcription initiation factor TFIID subuni...   348   4e-93
ref|XP_004235568.1| PREDICTED: uncharacterized protein LOC101258...   347   8e-93
ref|XP_006465927.1| PREDICTED: transcription initiation factor T...   340   8e-91
gb|EOY27231.1| Transcription initiation factor TFIID subunit A i...   340   1e-90
gb|EOY27229.1| Transcription initiation factor TFIID subunit A i...   340   1e-90
ref|XP_002521336.1| protein with unknown function [Ricinus commu...   338   3e-90
gb|EOY27232.1| Transcription initiation factor TFIID subunit A i...   335   3e-89
ref|XP_002304140.1| transcription initiation factor IID subunit ...   335   3e-89
ref|XP_003528481.1| PREDICTED: transcription initiation factor T...   323   1e-85
ref|XP_002892951.1| hypothetical protein ARALYDRAFT_471949 [Arab...   322   2e-85
ref|NP_564023.1| transcription initiation factor TFIID subunit 1...   321   4e-85
sp|B2C6R6.1|TAFCL_ARATH RecName: Full=Transcription initiation f...   320   9e-85
ref|XP_006306911.1| hypothetical protein CARUB_v10008470mg [Caps...   319   2e-84
gb|ESW07446.1| hypothetical protein PHAVU_010G130700g [Phaseolus...   315   2e-83

>gb|EXC04958.1| Transcription initiation factor TFIID subunit 12 [Morus notabilis]
          Length = 641

 Score =  357 bits (916), Expect = 6e-96
 Identities = 217/417 (52%), Positives = 255/417 (61%), Gaps = 22/417 (5%)
 Frame = +1

Query: 1    LPTLSGQSAAHIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLGLSS 180
            LP LS  +A    +Q+QLL  PR K  LVQGSQFHP NS+GQ LQGMQ MGM   LGLSS
Sbjct: 206  LPVLSSAAAVQFNLQNQLLTSPRHKAALVQGSQFHPGNSAGQTLQGMQAMGM---LGLSS 262

Query: 181  QIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQLSGL 360
            QIR+NG L+                         +    Q Q+L R SSL  LNPQLSGL
Sbjct: 263  QIRSNGALASYAQQRINQGQLRQQLSQQN-----ALNSSQVQSLPRTSSLAYLNPQLSGL 317

Query: 361  TQNGQSALMQNALSQQWLKQMQPGISAAGSPSYHIQPQQLQRQQAFMPQQLPSSP-LH-- 531
            +QNGQ A+MQN+LSQQWLKQM P IS  GSPS+ +Q Q+  +QQ  + QQL SS  LH  
Sbjct: 318  SQNGQPAMMQNSLSQQWLKQM-PSISGPGSPSFRLQQQR--QQQVLLQQQLASSSQLHQS 374

Query: 532  ----------------QKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 663
                            Q  MG                                       
Sbjct: 375  SIALNPQQLSQIAQQQQSPMGHPQLHQQQQQPQQLSQQQLQQQPQQLQQLQQQQSQQQPP 434

Query: 664  XXXXXXXSPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKIQDL 837
                   SPR+ GP+ QKSLSLTGSQPDA  SG TTP GSSSQGT+A+NQLLGKRKIQDL
Sbjct: 435  MHMQQQHSPRVHGPSGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDL 494

Query: 838  VSQVDPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKNWHL 1017
            VSQVD +GKLDPEVED+LLEIADDFIDSVT FACSLAKHRKSS LESKD+LLHLEKNW L
Sbjct: 495  VSQVDSQGKLDPEVEDLLLEIADDFIDSVTAFACSLAKHRKSSTLESKDLLLHLEKNWQL 554

Query: 1018 TIPGFSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSS-ANESVSNP 1185
            TIPGF  +EQK+Q K L +++H KR++ +R LME  QS+ +++N K   + + + NP
Sbjct: 555  TIPGF--EEQKHQNKLLSSDVHKKRLDLVRTLMESSQSEANTANRKEMISRQGLGNP 609


>ref|XP_004303683.1| PREDICTED: uncharacterized protein LOC101296405 [Fragaria vesca
            subsp. vesca]
          Length = 629

 Score =  357 bits (916), Expect = 6e-96
 Identities = 219/403 (54%), Positives = 250/403 (62%), Gaps = 18/403 (4%)
 Frame = +1

Query: 1    LPTLSGQSA--AHIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGM--MGSL 168
            LP LSG +A  A   MQ QLL  PRQK GLVQG+QF   NS GQ+LQG Q MGM  MGS+
Sbjct: 192  LPMLSGAAATAAQFNMQPQLLASPRQKSGLVQGTQF---NSPGQSLQGTQAMGMGMMGSI 248

Query: 169  GLSSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQ 348
             L+SQ+RANG L+Y                       AS Q L  QNL R SSL  +NPQ
Sbjct: 249  NLTSQLRANGALAYAQQRLNQGGQLRQQLSQQSSL--ASPQVLHLQNLPRTSSLAFMNPQ 306

Query: 349  LSGLTQNGQSALMQNALSQQWLKQMQPGISAAGSPSYHIQPQQLQ---RQQAFMPQQLPS 519
            LSGL QNGQ A+MQN+LSQQWLKQM P IS  GSPSY +Q Q+ Q   +QQ     QL  
Sbjct: 307  LSGLAQNGQPAMMQNSLSQQWLKQM-PAISGPGSPSYRLQQQRQQAIFQQQLASSTQLHQ 365

Query: 520  SPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----- 684
              L      L+                                                 
Sbjct: 366  KSLSMNQQQLSQIVQQQQQQQQLGLPQLQHQQQQQHQQQIQQPLQQQSQQQQPFNQQQQQ 425

Query: 685  ----SPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKIQDLVSQ 846
                SPRM  PA QKSLSLTGSQPDA  SG TTP GSSSQGT+A+NQLLGKRK+QDLVSQ
Sbjct: 426  PQQNSPRMPVPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKMQDLVSQ 485

Query: 847  VDPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKNWHLTIP 1026
            VD +G+LD EVED+LLEIADDFIDSVTTFACSLAKHRKSS LESKDVLLHLEKNWHLTIP
Sbjct: 486  VDSQGRLDSEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDVLLHLEKNWHLTIP 545

Query: 1027 GFSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAK 1155
            GFS +E+KYQ KSL +++H KR++ IR LME  Q + +++N K
Sbjct: 546  GFSSEERKYQNKSLSSDVHKKRLDMIRMLMESSQPETNTNNPK 588


>ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248501 [Vitis vinifera]
            gi|297743015|emb|CBI35882.3| unnamed protein product
            [Vitis vinifera]
          Length = 587

 Score =  357 bits (915), Expect = 8e-96
 Identities = 218/411 (53%), Positives = 250/411 (60%), Gaps = 18/411 (4%)
 Frame = +1

Query: 4    PTLSGQSAAHIGM-QSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLGLSS 180
            P LSGQ+AA   + Q  LL  PRQK GLVQGSQFHP N+ GQ+L GMQ +GMMG L LSS
Sbjct: 154  PMLSGQAAAAAAVAQFSLLTSPRQKAGLVQGSQFHPGNAPGQSLSGMQAIGMMGPLNLSS 213

Query: 181  QIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQLSGL 360
            Q+R NG L+Y                       +     Q Q+  R SSL  +NPQLS L
Sbjct: 214  QLRPNGTLTYAQQRINQGQMRQQLTQQ------SQLTPSQAQSRPRTSSLAFMNPQLSSL 267

Query: 361  TQNGQSALMQNALSQQ-WLKQMQPGISAAGSPSYHIQPQQ--LQRQQ------------A 495
            TQNGQ  ++QN+LSQQ WLKQM P +S  GSPSY +QP+Q  L +QQ            A
Sbjct: 268  TQNGQPGMLQNSLSQQQWLKQM-PAMSTPGSPSYRLQPRQQVLYQQQLASSPQLHQNPMA 326

Query: 496  FMPQQLPSSPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 675
              PQQL      Q  MG                                           
Sbjct: 327  LNPQQLSQLVQQQPQMG-----HQQLQQQIQSQQQQQQQQQQQQQQQQQQQQPTLHQQQQ 381

Query: 676  XXXSPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKIQDLVSQV 849
               SPRM GPA QKSLSLTGSQPDA  SG TTP GSSSQGT+ASNQLLGKRKIQDLVSQV
Sbjct: 382  QQASPRMAGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQV 441

Query: 850  DPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKNWHLTIPG 1029
            D +GKLDPEVED+LLEIADDFIDSVTTFACSLAKHRKSS LESKD+LLHLEKNW L IPG
Sbjct: 442  DSQGKLDPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEKNWDLKIPG 501

Query: 1030 FSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESVSN 1182
            +S +EQK Q K   +ELH KR++ +RALME   S+  ++NAK    + + N
Sbjct: 502  YSSEEQKNQTKPSSSELHKKRVDMVRALMESSHSE-TNANAKEMMRQGLGN 551


>gb|EMJ18178.1| hypothetical protein PRUPE_ppa002765mg [Prunus persica]
          Length = 635

 Score =  354 bits (908), Expect = 5e-95
 Identities = 209/397 (52%), Positives = 249/397 (62%), Gaps = 12/397 (3%)
 Frame = +1

Query: 1    LPTLSGQSA---AHIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLG 171
            LP LS  +A   A   +Q Q+L  PRQK GLVQGSQFH  NS  Q+LQG Q MGMMGS+ 
Sbjct: 207  LPMLSSAAAVAAAQFNLQPQMLASPRQKGGLVQGSQFHAGNSPAQSLQGTQAMGMMGSIN 266

Query: 172  LSSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQL 351
            LSSQ+RANG L+                        +S    Q Q+L R  SL  +NPQ 
Sbjct: 267  LSSQLRANGALA-----SFAQQRMNSGQLRQQLAQQSSLTSAQVQSLPRTPSLAFMNPQP 321

Query: 352  SGLTQNGQSALMQNALSQQWLKQMQPGISAAGSPSYHIQPQQLQRQQAFMPQQLPSS--- 522
            SG+TQNGQ A++QN+LSQQW KQM P IS  GSPS+ +Q Q+  +QQ    QQL S    
Sbjct: 322  SGMTQNGQPAMVQNSLSQQWFKQM-PTISGTGSPSFRLQQQR--QQQVLYQQQLASQKSM 378

Query: 523  PLHQKSMGL----NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP 690
            PL+Q+ +                                                   SP
Sbjct: 379  PLNQQQLSQLVQQQQQLSHPQLQQQQQQQLQQLPQHQQQQQQIQQQSQQQPLNQQQQNSP 438

Query: 691  RMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKIQDLVSQVDPRGK 864
            RM  PA QKSLSLTGSQPDA  SG TTP GSSSQGT+A+NQLLGKRKIQDLVSQ+D +G+
Sbjct: 439  RMAVPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQIDSQGR 498

Query: 865  LDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKNWHLTIPGFSKDE 1044
            LDPEVED+LLEIADDFIDSVTT+AC+LAKHRKSS LESKDVLLHLEKNW+LTIPGFS +E
Sbjct: 499  LDPEVEDLLLEIADDFIDSVTTYACNLAKHRKSSTLESKDVLLHLEKNWNLTIPGFSSEE 558

Query: 1045 QKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAK 1155
            +KYQ KSL ++LH KR++ IR LME    + +++N K
Sbjct: 559  RKYQNKSLSSDLHKKRLDMIRTLMESSHLETNTNNPK 595


>ref|XP_006426645.1| hypothetical protein CICLE_v10025234mg [Citrus clementina]
            gi|557528635|gb|ESR39885.1| hypothetical protein
            CICLE_v10025234mg [Citrus clementina]
          Length = 587

 Score =  353 bits (905), Expect = 1e-94
 Identities = 215/408 (52%), Positives = 254/408 (62%), Gaps = 16/408 (3%)
 Frame = +1

Query: 10   LSGQS---AAHIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLGLSS 180
            LSGQ+   AA   +QS L+  PRQK G+V GSQFHP NS GQ+L GMQ MG+   L LSS
Sbjct: 162  LSGQASAAAAQFNLQSPLMASPRQKPGVVPGSQFHPGNSPGQSLPGMQAMGI---LNLSS 218

Query: 181  QIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLAR-QSSLTALNPQLSG 357
             +RAN PL                               Q QNL+R  SSL  +NPQLSG
Sbjct: 219  HLRAN-PLYAQQRMNQGQIRQQLSQQNPLTSP-------QIQNLSRTSSSLAFMNPQLSG 270

Query: 358  LTQNGQSALMQNALSQQ-WLKQMQPGISAAGSPSYHIQPQQLQRQQAFMPQQLPSSPLHQ 534
            L QNGQ  +MQN+LSQQ WLKQM P +SA GSPS+ +Q  Q Q     + QQL SSP  Q
Sbjct: 271  LAQNGQPGMMQNSLSQQQWLKQM-PAMSAPGSPSFRLQQHQRQ-SPVLLQQQLASSPQLQ 328

Query: 535  KSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------S 687
             SMGLN                                                     S
Sbjct: 329  NSMGLNQQQLSQLVQQQPQMGHAQLHQPQPQPQPQQQQQLQQQQSQQQPSLHQQQQQQQS 388

Query: 688  PRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKIQDLVSQVDPRG 861
            PR+ GPA QKSLSLTGSQPDA  SG TTP GSSSQGT+A+NQLLGKRKIQDLVSQVD +G
Sbjct: 389  PRISGPAGQKSLSLTGSQPDATVSGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQG 448

Query: 862  KLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKNWHLTIPGFSKD 1041
            K+DPEVED+LLEIADDFIDSVT+FAC+LAKHRKSS LESKD+LLHLEKNWHLT+PGFS +
Sbjct: 449  KVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESKDILLHLEKNWHLTVPGFSSE 508

Query: 1042 EQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESVSNP 1185
            E+ +QRKSL +++H KR+E IRALMEP QS+  +++ +    + + NP
Sbjct: 509  ERNHQRKSLSSDVHSKRLEMIRALMEPSQSETITNDPREMIRQGLGNP 556


>gb|ADL36631.1| C2H2L domain class transcription factor [Malus domestica]
          Length = 630

 Score =  352 bits (902), Expect = 3e-94
 Identities = 212/397 (53%), Positives = 247/397 (62%), Gaps = 12/397 (3%)
 Frame = +1

Query: 1    LPTLSGQSA---AHIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLG 171
            LP LSG +A   A   +Q QLL  PRQK  LVQGSQFH  NS GQ+LQG Q MG+MGS+ 
Sbjct: 198  LPMLSGPAAVAAAQFNLQPQLLASPRQKGSLVQGSQFHHGNSPGQSLQGTQAMGVMGSIN 257

Query: 172  LSSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQL 351
            LSSQ+RANG ++                         S Q    Q+L R SSL+ +NPQL
Sbjct: 258  LSSQLRANGAIASFAQQRINQGQGQLRQQLAQQSPLTSAQV---QSLPRTSSLSFMNPQL 314

Query: 352  SGLTQNGQSALMQNALSQQWLKQMQPGISAAGSPSYHIQPQ-QLQRQQAFMPQQLPSSPL 528
            SG++QNGQ A++QN+LSQQWLKQM P     GSPS     + Q  RQQ    QQL S+ L
Sbjct: 315  SGVSQNGQPAMIQNSLSQQWLKQM-PASPGPGSPSPSPSSRLQQHRQQVLYQQQLASNQL 373

Query: 529  HQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------SP 690
             QKSM L                                                   SP
Sbjct: 374  -QKSMPLTPQQFNQLVQQQQQMGHPQLQQQQHQQQLQQQQIQQPLQQQSQQQQQQQLSSP 432

Query: 691  RMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKIQDLVSQVDPRGK 864
            RM GPA QKSLSLTGS PDA  SG TTP GSSSQGT+A+NQLLGKRKIQDLVSQVD +G+
Sbjct: 433  RMAGPAGQKSLSLTGSHPDAAASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQGR 492

Query: 865  LDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKNWHLTIPGFSKDE 1044
            LDPEVED+LLEIADDFIDSVTT+AC+LAKHRKSS LESKDVLLHLEKNWHLTIPGFS +E
Sbjct: 493  LDPEVEDLLLEIADDFIDSVTTYACNLAKHRKSSTLESKDVLLHLEKNWHLTIPGFSSEE 552

Query: 1045 QKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAK 1155
            +K Q KSL ++LH KR++ IR LME    +++ +  K
Sbjct: 553  RKCQNKSLSSDLHKKRLDVIRTLMESSNLEKNPNTPK 589


>ref|NP_001275310.1| transcription initiation factor TFIID subunit 12b-like [Solanum
            tuberosum] gi|77403675|dbj|BAE46416.1| TATA binding
            protein associated factor [Solanum tuberosum]
          Length = 638

 Score =  348 bits (892), Expect = 4e-93
 Identities = 216/401 (53%), Positives = 249/401 (62%), Gaps = 9/401 (2%)
 Frame = +1

Query: 1    LPTLSGQSA------AHIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMG 162
            LP LSGQ+A      A   +QSQ LN PRQK GL+QG+QFH  NS GQ+LQ M   GMMG
Sbjct: 233  LPMLSGQAAVAAAAVAQFNLQSQFLNSPRQKAGLMQGNQFHTGNSHGQSLQAM---GMMG 289

Query: 163  SLGLSSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALN 342
            SL +SSQ+RANG L+Y                        +TQK+  Q+L R S     N
Sbjct: 290  SLNMSSQLRANGALAYAQRVNQSQLRQQQLSQQNSL---TTTQKISAQSLPRTSFA---N 343

Query: 343  PQLSGLTQNGQSALMQNALSQQ-WLKQMQPGISAAGSPSYHIQPQQLQRQQAFMPQQLPS 519
             QL GLTQNGQSA+MQN  SQQ WLK M P IS   SPS+ +Q Q   RQQ  +      
Sbjct: 344  SQLPGLTQNGQSAIMQNNSSQQQWLKPM-PAISTPNSPSFRLQQQ---RQQMLLQ----- 394

Query: 520  SPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRML 699
               HQ SMGLN                                            SPRM 
Sbjct: 395  ---HQNSMGLNPQQLSQIVQQQQQIGHPQMHQQQQQQQQQQQLSHQQQS------SPRMA 445

Query: 700  GPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKIQDLVSQVDPRGKLDP 873
             PA QKSLSLTGSQPDA  SG TTP GSSSQGT+ASNQLLGKRKIQDLVSQVD +GKLDP
Sbjct: 446  APAGQKSLSLTGSQPDATGSGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQVDAQGKLDP 505

Query: 874  EVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKNWHLTIPGFSKDEQKY 1053
            EVED+LLEIADDFIDSVTTFAC+LAKHRKSS LESKDVLLHLEKNWHLTIPGFS +E+K+
Sbjct: 506  EVEDLLLEIADDFIDSVTTFACNLAKHRKSSTLESKDVLLHLEKNWHLTIPGFSSEERKH 565

Query: 1054 QRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESV 1176
              ++  ++LH KR++ IR LME  Q++   ++  SSA E+V
Sbjct: 566  YPENSSSDLHKKRLDVIRTLMETSQTE---TSTNSSAKETV 603


>ref|XP_004235568.1| PREDICTED: uncharacterized protein LOC101258141 [Solanum
            lycopersicum]
          Length = 642

 Score =  347 bits (889), Expect = 8e-93
 Identities = 216/401 (53%), Positives = 248/401 (61%), Gaps = 9/401 (2%)
 Frame = +1

Query: 1    LPTLSGQSAA------HIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMG 162
            LP LSGQ+AA         +QSQ LN PRQK GL+QG+QFH  NS GQ+LQ M   GMMG
Sbjct: 237  LPMLSGQAAAAAAAVAQFNLQSQFLNSPRQKAGLMQGNQFHTGNSHGQSLQAM---GMMG 293

Query: 163  SLGLSSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALN 342
            SL +SSQ+RANG L+Y                        +TQK+  Q+L R S     N
Sbjct: 294  SLNMSSQLRANGALAYAQRVNQGQLRQQQLSQQNPL---TTTQKISAQSLPRTSFA---N 347

Query: 343  PQLSGLTQNGQSALMQNALSQQ-WLKQMQPGISAAGSPSYHIQPQQLQRQQAFMPQQLPS 519
             QL GLTQNGQSA+MQN  SQQ WLK M P IS   SPS+ +Q Q   RQQ  +      
Sbjct: 348  SQLPGLTQNGQSAIMQNNSSQQQWLKPM-PAISTPNSPSFRLQQQ---RQQMLLQ----- 398

Query: 520  SPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRML 699
               HQ SMGLN                                            SPRM 
Sbjct: 399  ---HQNSMGLNPQQLSQIVQQQQQIGHPQMHQQQQQQQQQQQLSHQQQS------SPRMA 449

Query: 700  GPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKIQDLVSQVDPRGKLDP 873
             PA QKSLSLTGSQPDA  SG TTP GSSSQGT+ASNQLLGKRKIQDLVSQVD +GKLDP
Sbjct: 450  APAGQKSLSLTGSQPDATGSGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQVDAQGKLDP 509

Query: 874  EVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKNWHLTIPGFSKDEQKY 1053
            EVED+LLEIADDFIDSVTTFAC+LAKHRKSS LESKDVLLHLEKNWHLTIPGFS +E+K 
Sbjct: 510  EVEDLLLEIADDFIDSVTTFACNLAKHRKSSTLESKDVLLHLEKNWHLTIPGFSSEERKQ 569

Query: 1054 QRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESV 1176
              ++  ++LH KR++ IR LME  Q++   ++  SSA E+V
Sbjct: 570  YPENSSSDLHKKRLDVIRTLMETSQTE---TSTNSSAKETV 607


>ref|XP_006465927.1| PREDICTED: transcription initiation factor TFIID subunit 12b-like
            [Citrus sinensis]
          Length = 593

 Score =  340 bits (872), Expect = 8e-91
 Identities = 213/416 (51%), Positives = 252/416 (60%), Gaps = 24/416 (5%)
 Frame = +1

Query: 10   LSGQS---AAHIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLGLSS 180
            LSGQ+   AA   +QS L+  PRQK G+V GSQFHP NS GQ+L GMQ MG+   L LSS
Sbjct: 162  LSGQASAAAAQFNLQSPLMASPRQKPGVVPGSQFHPGNSPGQSLPGMQAMGI---LNLSS 218

Query: 181  QIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLAR-QSSLTALNPQLSG 357
             +RAN PL                               Q QNL+R  SSL  +NPQLSG
Sbjct: 219  HLRAN-PLYAQQRMNQGQIRQQLSQQNPLTSP-------QIQNLSRTSSSLAFMNPQLSG 270

Query: 358  LTQNGQSALMQNALSQQ-WLKQMQPGISAAGSPSYHIQPQQ------LQRQQAFMPQ--- 507
            L QNGQ  +MQN+LSQQ WLKQM P +SA GSPS+ +Q  Q      LQ+Q A  PQ   
Sbjct: 271  LAQNGQPGMMQNSLSQQQWLKQM-PAMSAPGSPSFRLQQHQRQPPVLLQQQLASSPQLHQ 329

Query: 508  --------QLPSSPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 663
                    QL      Q  MG                                       
Sbjct: 330  NSMGLNQQQLSQLVQQQPQMG---HAQLHQPQPQPQPQPQQQQQQQQLQQQQSQQQSSLH 386

Query: 664  XXXXXXXSPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKIQDL 837
                   SPR+ GPA QKSLSLTGSQPDA  SG TTP GSSSQGT+A+NQLLGKRKIQDL
Sbjct: 387  QQQQQQQSPRISGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDL 446

Query: 838  VSQVDPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKNWHL 1017
            VSQVD +GK+DPEVED+LLEIADDFIDSVT+FAC+LAKHRKSS LESKD+LLHLEKNWHL
Sbjct: 447  VSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESKDILLHLEKNWHL 506

Query: 1018 TIPGFSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESVSNP 1185
            T+PGFS +E+ +QRKSL +++H KR+E IRALMEP QS+  +++ +    + + NP
Sbjct: 507  TVPGFSSEERNHQRKSLSSDVHSKRLEMIRALMEPSQSETITNDPREMIRQGLGNP 562


>gb|EOY27231.1| Transcription initiation factor TFIID subunit A isoform 3 [Theobroma
            cacao]
          Length = 671

 Score =  340 bits (871), Expect = 1e-90
 Identities = 214/420 (50%), Positives = 247/420 (58%), Gaps = 25/420 (5%)
 Frame = +1

Query: 1    LPTLSGQSAA---HIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLG 171
            LP LSG +AA    + +Q QLL  PRQK GLVQGSQFHP N +GQ+LQGMQ MGMM    
Sbjct: 231  LPMLSGAAAAAAAQLSLQPQLLASPRQKAGLVQGSQFHPGNPTGQSLQGMQAMGMMN--- 287

Query: 172  LSSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQL 351
            LSSQ+RANG L                               Q Q+L R SS   +NPQL
Sbjct: 288  LSSQLRANGNL-------YAQHRINQGQMRQQLSQQTQLTSPQVQSLPRTSSQAFINPQL 340

Query: 352  SGLTQNGQSALMQNAL-SQQWLKQMQPGISAAGSPSYHIQ-------PQQL--------Q 483
            SGL Q+GQ  +MQN+L  QQWLKQM P IS  GSPS+ +Q       PQQL        Q
Sbjct: 341  SGLAQSGQPGMMQNSLLQQQWLKQM-PSISGPGSPSFRLQRQSQVLLPQQLASSSPQLHQ 399

Query: 484  RQQAFMPQQLPSSPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 663
               A   QQL      Q  MG +                                     
Sbjct: 400  NSMALNSQQLSQLVQQQSQMGHSQMQQPQQHQQQQQQQQQQQQQQQHQLQQQPLQQLQPQ 459

Query: 664  XXXXXXX----SPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRK 825
                       SPRM GPA QKSLSLTGSQPDA  SG TTP GSSSQGT+A+NQLLGKRK
Sbjct: 460  QPPLHQPQQQQSPRMPGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRK 519

Query: 826  IQDLVSQVDPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEK 1005
            IQDLVSQVD +GKL+PEVED+LLEIADDFIDSVTTFACSLAKHRKSS LESKD+LLHLEK
Sbjct: 520  IQDLVSQVDSQGKLEPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEK 579

Query: 1006 NWHLTIPGFSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESVSNP 1185
            NW LTIPGFS +E+  Q + L ++LH +R++ IRALME  Q +  ++N K    + + NP
Sbjct: 580  NWRLTIPGFSSEERN-QTRPLSSDLHKQRLDMIRALMESSQPETTANNPKEMIRQGLGNP 638


>gb|EOY27229.1| Transcription initiation factor TFIID subunit A isoform 1 [Theobroma
            cacao]
          Length = 670

 Score =  340 bits (871), Expect = 1e-90
 Identities = 214/420 (50%), Positives = 247/420 (58%), Gaps = 25/420 (5%)
 Frame = +1

Query: 1    LPTLSGQSAA---HIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLG 171
            LP LSG +AA    + +Q QLL  PRQK GLVQGSQFHP N +GQ+LQGMQ MGMM    
Sbjct: 231  LPMLSGAAAAAAAQLSLQPQLLASPRQKAGLVQGSQFHPGNPTGQSLQGMQAMGMMN--- 287

Query: 172  LSSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQL 351
            LSSQ+RANG L                               Q Q+L R SS   +NPQL
Sbjct: 288  LSSQLRANGNL-------YAQHRINQGQMRQQLSQQTQLTSPQVQSLPRTSSQAFINPQL 340

Query: 352  SGLTQNGQSALMQNAL-SQQWLKQMQPGISAAGSPSYHIQ-------PQQL--------Q 483
            SGL Q+GQ  +MQN+L  QQWLKQM P IS  GSPS+ +Q       PQQL        Q
Sbjct: 341  SGLAQSGQPGMMQNSLLQQQWLKQM-PSISGPGSPSFRLQRQSQVLLPQQLASSSPQLHQ 399

Query: 484  RQQAFMPQQLPSSPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 663
               A   QQL      Q  MG +                                     
Sbjct: 400  NSMALNSQQLSQLVQQQSQMGHSQMQQPQQHQQQQQQQQQQQQQQQHQLQQQPLQQLQPQ 459

Query: 664  XXXXXXX----SPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRK 825
                       SPRM GPA QKSLSLTGSQPDA  SG TTP GSSSQGT+A+NQLLGKRK
Sbjct: 460  QPPLHQPQQQQSPRMPGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRK 519

Query: 826  IQDLVSQVDPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEK 1005
            IQDLVSQVD +GKL+PEVED+LLEIADDFIDSVTTFACSLAKHRKSS LESKD+LLHLEK
Sbjct: 520  IQDLVSQVDSQGKLEPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEK 579

Query: 1006 NWHLTIPGFSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESVSNP 1185
            NW LTIPGFS +E+  Q + L ++LH +R++ IRALME  Q +  ++N K    + + NP
Sbjct: 580  NWRLTIPGFSSEERN-QTRPLSSDLHKQRLDMIRALMESSQPETTANNPKEMIRQGLGNP 638


>ref|XP_002521336.1| protein with unknown function [Ricinus communis]
            gi|223539414|gb|EEF41004.1| protein with unknown function
            [Ricinus communis]
          Length = 523

 Score =  338 bits (867), Expect = 3e-90
 Identities = 209/420 (49%), Positives = 248/420 (59%), Gaps = 23/420 (5%)
 Frame = +1

Query: 1    LPTLSGQ---SAAHIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLG 171
            LP L+G    +AA    Q  LL  PRQK GLVQG+QFHP +S GQ LQGMQ MGMMGSL 
Sbjct: 82   LPMLTGAGAVAAAAAAAQLNLLASPRQKAGLVQGTQFHPGSSPGQPLQGMQAMGMMGSLN 141

Query: 172  LSSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQL 351
            L+SQ+R NGPL++                             Q  NL+R SSL  +NPQL
Sbjct: 142  LTSQLRPNGPLTFAQQRLNAGQMRQQLAQQNPLTSS------QVPNLSRTSSLAFMNPQL 195

Query: 352  SGLTQNGQSALMQNAL-SQQWLKQMQPGISAAGSPSYHIQPQQ----LQRQQA------- 495
            SGLTQN Q ++MQN+L  QQWLKQM  G+    SPS  +Q +Q    LQ+Q A       
Sbjct: 196  SGLTQNAQPSMMQNSLPQQQWLKQMT-GMPGPASPSLRLQQRQSQVLLQQQLASSSQLHQ 254

Query: 496  ----FMPQQLPSSPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 663
                  PQQL      Q +M                                        
Sbjct: 255  NSMTLNPQQLSQLVQQQPAMTHQQLHQQQQQQQQQQQQQQQQMQQMQQQQQPQQQLQQQL 314

Query: 664  XXXXXXX--SPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKIQ 831
                     SP M GP  QKSLSLTGSQPDA  SG TTP GSSSQGT+A+NQLLGKRKIQ
Sbjct: 315  PLHQQQQQQSPMMQGPTGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQ 374

Query: 832  DLVSQVDPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKNW 1011
            DLVSQVD +GK+DPEVE++LLEIADDFID+VT FACSLAKHRKSS LESKD+LLHLEKNW
Sbjct: 375  DLVSQVDSQGKVDPEVEELLLEIADDFIDNVTMFACSLAKHRKSSTLESKDLLLHLEKNW 434

Query: 1012 HLTIPGFSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESVSNPAI 1191
            HLTIPGFS +E+  QRK L ++LH KR++ IRAL EP  S+  ++N +    + + NP +
Sbjct: 435  HLTIPGFSTEERNLQRKPLSSDLHKKRLDMIRALREPSHSE-TNNNPREMIRQGLGNPVV 493


>gb|EOY27232.1| Transcription initiation factor TFIID subunit A isoform 4 [Theobroma
            cacao]
          Length = 672

 Score =  335 bits (859), Expect = 3e-89
 Identities = 214/421 (50%), Positives = 247/421 (58%), Gaps = 26/421 (6%)
 Frame = +1

Query: 1    LPTLSGQSAA---HIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLG 171
            LP LSG +AA    + +Q QLL  PRQK GLVQGSQFHP N +GQ+LQGMQ MGMM    
Sbjct: 231  LPMLSGAAAAAAAQLSLQPQLLASPRQKAGLVQGSQFHPGNPTGQSLQGMQAMGMMN--- 287

Query: 172  LSSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQL 351
            LSSQ+RANG L                               Q Q+L R SS   +NPQL
Sbjct: 288  LSSQLRANGNL-------YAQHRINQGQMRQQLSQQTQLTSPQVQSLPRTSSQAFINPQL 340

Query: 352  SGLTQNGQSALMQNAL-SQQWLKQMQPGISAAGSPSYHIQ-------PQQL--------Q 483
            SGL Q+GQ  +MQN+L  QQWLKQM P IS  GSPS+ +Q       PQQL        Q
Sbjct: 341  SGLAQSGQPGMMQNSLLQQQWLKQM-PSISGPGSPSFRLQRQSQVLLPQQLASSSPQLHQ 399

Query: 484  RQQAFMPQQLPSSPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 663
               A   QQL      Q  MG +                                     
Sbjct: 400  NSMALNSQQLSQLVQQQSQMGHSQMQQPQQHQQQQQQQQQQQQQQQHQLQQQPLQQLQPQ 459

Query: 664  XXXXXXX----SPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRK 825
                       SPRM GPA QKSLSLTGSQPDA  SG TTP GSSSQGT+A+NQLLGKRK
Sbjct: 460  QPPLHQPQQQQSPRMPGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRK 519

Query: 826  IQDLVSQ-VDPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLE 1002
            IQDLVSQ VD +GKL+PEVED+LLEIADDFIDSVTTFACSLAKHRKSS LESKD+LLHLE
Sbjct: 520  IQDLVSQQVDSQGKLEPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLE 579

Query: 1003 KNWHLTIPGFSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESVSN 1182
            KNW LTIPGFS +E+  Q + L ++LH +R++ IRALME  Q +  ++N K    + + N
Sbjct: 580  KNWRLTIPGFSSEERN-QTRPLSSDLHKQRLDMIRALMESSQPETTANNPKEMIRQGLGN 638

Query: 1183 P 1185
            P
Sbjct: 639  P 639


>ref|XP_002304140.1| transcription initiation factor IID subunit A family protein [Populus
            trichocarpa] gi|222841572|gb|EEE79119.1| transcription
            initiation factor IID subunit A family protein [Populus
            trichocarpa]
          Length = 655

 Score =  335 bits (858), Expect = 3e-89
 Identities = 206/421 (48%), Positives = 247/421 (58%), Gaps = 24/421 (5%)
 Frame = +1

Query: 1    LPTLSGQSAA----HIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSL 168
            LP  +G +AA     + + SQLL  PRQK GL QGSQFH  +S GQ+LQG+Q MG+MGS 
Sbjct: 183  LPMFTGAAAAAAAAQLNLPSQLLASPRQKAGLAQGSQFHSGDSPGQSLQGIQAMGVMGSS 242

Query: 169  GLSSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQ 348
               SQ+R NG L+Y                        ++   Q Q+L R  SL  +N Q
Sbjct: 243  LNLSQLRPNGALAYAQQRMSAGSMRQQLVQQ-------NSLTSQVQSLQRTQSLAYMNHQ 295

Query: 349  LSGLTQNGQSALMQNALSQQ-WLKQMQPGISAAGSPSYHIQPQQ----LQRQ-------- 489
            +SGL QN Q  +MQ++LSQQ WLKQM P +S   SPS H+Q +Q    LQ+Q        
Sbjct: 296  MSGLAQNAQPTMMQSSLSQQQWLKQM-PTMSGPASPSLHLQQRQSQAFLQQQLASSGQLH 354

Query: 490  ---QAFMPQQLPSSPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
                A   QQL      Q  +G                                      
Sbjct: 355  QNSMALNSQQLSQLVQQQPQIGHQQLQQQQQQQQLLQQQQQQQQQQLLQQQQQQQLQQVS 414

Query: 661  XXXXXXXX--SPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKI 828
                      SPRM GP  QK+LSLTGSQPDA  SG TTP GSSSQGT+A+NQLLGKRKI
Sbjct: 415  LHQQQQHQQQSPRMPGPPGQKTLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKI 474

Query: 829  QDLVSQVDPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKN 1008
            QDLVSQVD  GKLDPEVE++ LEIADDFIDSVT FACSLAKHRKSS LESKD+LLHLEKN
Sbjct: 475  QDLVSQVDSHGKLDPEVEELFLEIADDFIDSVTAFACSLAKHRKSSTLESKDILLHLEKN 534

Query: 1009 WHLTIPGFSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESVSNPA 1188
            WHLTIPGFS +E+K+Q K LP++LH KR++ IRALME  QS+ ++ N K    +   NPA
Sbjct: 535  WHLTIPGFSSEERKHQSKPLPSDLHKKRLDMIRALMESSQSEENNINPKEMIRQGHGNPA 594

Query: 1189 I 1191
            +
Sbjct: 595  V 595


>ref|XP_003528481.1| PREDICTED: transcription initiation factor TFIID subunit 12b-like
            [Glycine max]
          Length = 599

 Score =  323 bits (828), Expect = 1e-85
 Identities = 198/411 (48%), Positives = 238/411 (57%), Gaps = 13/411 (3%)
 Frame = +1

Query: 4    PTLSGQSAAHIGMQSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLGLSSQ 183
            P LSG      G Q  LL+ PRQK GLVQ SQF   NS+GQ+LQGMQ MGMMGS  L+SQ
Sbjct: 171  PMLSGA-----GTQFNLLSSPRQKGGLVQSSQFSSGNSAGQSLQGMQAMGMMGSPNLTSQ 225

Query: 184  IRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQLSGLT 363
            +RANG ++Y                        S    Q Q L R SSL  ++ QLSGL+
Sbjct: 226  LRANGAMAYAQQLRMSQGQIRQQLSQQ-----GSLNTAQVQGLPRSSSLAFMSSQLSGLS 280

Query: 364  QNGQSALMQNALSQQWLKQMQPGISAAGSPS--YHIQPQQL-------QRQQAFMPQQLP 516
            QNGQ A++ +   QQWLKQM P +S   +P    H + QQL       Q       QQL 
Sbjct: 281  QNGQPAMINSLTQQQWLKQM-PAMSGPAAPLRLQHQRQQQLGSSTQLQQNSMTLNQQQLS 339

Query: 517  SSPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SP 690
                 QKSMG                                                SP
Sbjct: 340  QLMQQQKSMGQPQLLQQQQQQQQQPQPQQLQQQLIQQQPQQQSHLQVSVHQQQQQQQQSP 399

Query: 691  RMLGPAAQKSLSLTGSQPD--ASGATTPRGSSSQGTDASNQLLGKRKIQDLVSQVDPRGK 864
            RM GPA QKSLSLTGSQPD  ASGATTP GSSSQGT+A+NQ+LGKRKIQDLV+QVDP+G+
Sbjct: 400  RMPGPAGQKSLSLTGSQPDVTASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQVDPQGR 459

Query: 865  LDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKNWHLTIPGFSKDE 1044
            LDPEV D+LLE+ADDFIDS TT  C LAKHRKSS LESKD+LLHLEKNW LTIPG+S +E
Sbjct: 460  LDPEVIDLLLELADDFIDSATTHGCILAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEE 519

Query: 1045 QKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESVSNPAICG 1197
            +K Q K   N+LH +R++ +R LME   S+   +++K  + + +SNP   G
Sbjct: 520  KKNQSKPQLNDLHKRRLDMVRTLMESSSSESSINSSKEMSRQGISNPPPVG 570


>ref|XP_002892951.1| hypothetical protein ARALYDRAFT_471949 [Arabidopsis lyrata subsp.
            lyrata] gi|297338793|gb|EFH69210.1| hypothetical protein
            ARALYDRAFT_471949 [Arabidopsis lyrata subsp. lyrata]
          Length = 670

 Score =  322 bits (826), Expect = 2e-85
 Identities = 208/419 (49%), Positives = 249/419 (59%), Gaps = 24/419 (5%)
 Frame = +1

Query: 1    LPTLSGQS-AAHIGMQSQLLN-QPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLGL 174
            LP L+G + +A + +Q QLL   PRQK GLVQGSQFHP  SSGQ LQGMQ MGMMGSL L
Sbjct: 232  LPMLNGAAGSAQMNIQPQLLAASPRQKSGLVQGSQFHPG-SSGQQLQGMQAMGMMGSLNL 290

Query: 175  SSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQLS 354
            +SQ+R N P  Y                        +    Q QNL R SSL  +NPQLS
Sbjct: 291  TSQMRGN-PALYAQQRINPGQMRQQLSQQN------ALTSPQVQNLQRTSSLAFMNPQLS 343

Query: 355  GLTQNGQSALMQNALSQQ-WLKQMQPGISAAGSPSYHIQP--------QQLQRQQAFMPQ 507
            GL QNGQ+ +MQN+LSQQ WLKQM  GI++  S  + +QP        QQ Q+QQ   PQ
Sbjct: 344  GLAQNGQAGMMQNSLSQQQWLKQMS-GITSPNS--FRLQPSQRQALLLQQQQQQQLPSPQ 400

Query: 508  -----------QLPSSPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 654
                       QL      Q+                                       
Sbjct: 401  LHQSSMSLNQQQLSQIIQQQQQQSQLGQSQMNHSHSQQQLQQMQQQIQQQPQQQMQQQQQ 460

Query: 655  XXXXXXXXXXSPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKI 828
                      SPRM   A QKS+SLTGSQPDA  SG TTP GSSSQGTDA+NQLLGKRKI
Sbjct: 461  QQMQINQQQPSPRMSSHAGQKSVSLTGSQPDATQSGTTTPGGSSSQGTDATNQLLGKRKI 520

Query: 829  QDLVSQVDPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKN 1008
            QDLVSQVD   KLDP+VED+LLE+ADDFIDSVT+FACSLAKHRKSS+LE KD+LLHLEKN
Sbjct: 521  QDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKN 580

Query: 1009 WHLTIPGFSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESVSNP 1185
             HLTIPGFS D  K Q K++P +LH KR+  +RAL+E  +++ ++SN+K +  + + NP
Sbjct: 581  LHLTIPGFSSD-NKRQTKTVPTDLHKKRLAMVRALLESSKAETNASNSKETIRQVMVNP 638


>ref|NP_564023.1| transcription initiation factor TFIID subunit 12B [Arabidopsis
            thaliana] gi|30685323|ref|NP_849680.1| transcription
            initiation factor TFIID subunit 12B [Arabidopsis
            thaliana] gi|75249490|sp|Q940A7.1|TA12B_ARATH RecName:
            Full=Transcription initiation factor TFIID subunit 12b;
            AltName: Full=Protein CYTOKININ-HYPERSENSITIVE 1;
            AltName: Full=Protein ENHANCED ETHYLENE RESPONSE 4;
            AltName: Full=TBP-associated factor 12b; Short=AtTAF12b
            gi|15810159|gb|AAL07223.1| unknown protein [Arabidopsis
            thaliana] gi|20259253|gb|AAM14362.1| unknown protein
            [Arabidopsis thaliana] gi|39545906|gb|AAR28016.1| TAF12b
            [Arabidopsis thaliana] gi|332191466|gb|AEE29587.1|
            transcription initiation factor TFIID subunit A
            [Arabidopsis thaliana] gi|332191467|gb|AEE29588.1|
            transcription initiation factor TFIID subunit A
            [Arabidopsis thaliana]
          Length = 683

 Score =  321 bits (823), Expect = 4e-85
 Identities = 210/427 (49%), Positives = 252/427 (59%), Gaps = 32/427 (7%)
 Frame = +1

Query: 1    LPTLSGQS-AAHIGMQSQLLN-QPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLGL 174
            LP L+G + AA + +Q QLL   PRQK G+VQGSQFHP  SSGQ LQGMQ MGMMGSL L
Sbjct: 241  LPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPG-SSGQQLQGMQAMGMMGSLNL 299

Query: 175  SSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQLS 354
            +SQ+R N P  Y                        +    Q QNL R SSL  +NPQLS
Sbjct: 300  TSQMRGN-PALYAQQRINPGQMRQQLSQQN------ALTSPQVQNLQRTSSLAFMNPQLS 352

Query: 355  GLTQNGQSALMQNALSQQ-WLKQMQPGISAAGS----PSYH----IQPQQLQRQQAFMP- 504
            GL QNGQ+ +MQN+LSQQ WLKQM  GI++  S    PS      +Q QQ Q+QQ   P 
Sbjct: 353  GLAQNGQAGMMQNSLSQQQWLKQMS-GITSPNSFRLQPSQRQALLLQQQQQQQQQLSSPQ 411

Query: 505  ------------------QQLPSSPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXX 630
                              QQ   S L Q  M  +                          
Sbjct: 412  LHQSSMSLNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQPQQQMQQQQQ 471

Query: 631  XXXXXXXXXXXXXXXXXXSPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASN 804
                              SPRML  A QKS+SLTGSQP+A  SG TTP GSSSQGT+A+N
Sbjct: 472  QQQQMQINQQQP------SPRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEATN 525

Query: 805  QLLGKRKIQDLVSQVDPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKD 984
            QLLGKRKIQDLVSQVD   KLDP+VED+LLE+ADDFIDSVT+FACSLAKHRKSS+LE KD
Sbjct: 526  QLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKD 585

Query: 985  VLLHLEKNWHLTIPGFSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSA 1164
            +LLHLEKN HLTIPGFS  E K Q K++P +LH KR+  +RAL+E  + + ++SN+K + 
Sbjct: 586  ILLHLEKNLHLTIPGFS-SEDKRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKETM 644

Query: 1165 NESVSNP 1185
             +++ NP
Sbjct: 645  RQAMVNP 651


>sp|B2C6R6.1|TAFCL_ARATH RecName: Full=Transcription initiation factor TFIID subunit 12b;
            AltName: Full=Protein CYTOKININ-HYPERSENSITIVE 1;
            AltName: Full=Protein ENHANCED ETHYLENE RESPONSE 4;
            AltName: Full=TBP-associated factor 12b; Short=AtTAF12b
            gi|169218920|gb|ACA50283.1| cytokinin hypersensitive 1
            [Arabidopsis thaliana]
          Length = 681

 Score =  320 bits (820), Expect = 9e-85
 Identities = 207/423 (48%), Positives = 247/423 (58%), Gaps = 28/423 (6%)
 Frame = +1

Query: 1    LPTLSGQS-AAHIGMQSQLLN-QPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLGL 174
            LP L+G + AA + +Q QLL   PRQK G+VQGSQFHP  SSGQ LQGMQ MGMMGSL L
Sbjct: 242  LPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPG-SSGQQLQGMQAMGMMGSLNL 300

Query: 175  SSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQLS 354
            +SQ+R N P  Y                        +    Q QNL R SSL  +NPQLS
Sbjct: 301  TSQMRGN-PALYAQQRINPGQMRQQLSQQN------ALTSPQVQNLQRTSSLAFMNPQLS 353

Query: 355  GLTQNGQSALMQNALSQQ-WLKQM-----------QPGISAA----------GSPSYHIQ 468
            GL QNGQ+ +MQN+LSQQ WLKQM           QP    A           SP  H  
Sbjct: 354  GLAQNGQAGMMQNSLSQQQWLKQMSGITSPNSFRLQPSQRQALLLQQQQQQLSSPQLHQS 413

Query: 469  PQQLQRQQA--FMPQQLPSSPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 642
               L +QQ    + QQ   S L Q  M  +                              
Sbjct: 414  SMSLNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQ 473

Query: 643  XXXXXXXXXXXXXXSPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLG 816
                          SPRML  A QKS+SLTGSQP+A  SG TTP GSSSQGT+A+NQLLG
Sbjct: 474  MQINQQQP------SPRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEATNQLLG 527

Query: 817  KRKIQDLVSQVDPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLH 996
            KRKIQDLVSQVD   KLDP+VED+LLE+ADDFIDSVT+FACSLAKHRKSS+LE KD+LLH
Sbjct: 528  KRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLH 587

Query: 997  LEKNWHLTIPGFSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESV 1176
            LEKN HLTIPGFS  E K Q K++P +LH KR+  +RAL+E  + + ++SN+K +  +++
Sbjct: 588  LEKNLHLTIPGFS-SEDKRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAM 646

Query: 1177 SNP 1185
             NP
Sbjct: 647  VNP 649


>ref|XP_006306911.1| hypothetical protein CARUB_v10008470mg [Capsella rubella]
            gi|482575622|gb|EOA39809.1| hypothetical protein
            CARUB_v10008470mg [Capsella rubella]
          Length = 694

 Score =  319 bits (817), Expect = 2e-84
 Identities = 207/419 (49%), Positives = 249/419 (59%), Gaps = 24/419 (5%)
 Frame = +1

Query: 1    LPTLSGQS--AAHIGMQSQLLN-QPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLG 171
            LP L+G +  AA + +Q QLL   PRQK GLVQGSQFHP  SSGQ LQGMQ MGMMGSL 
Sbjct: 256  LPLLNGAAGAAAQMNIQPQLLAASPRQKSGLVQGSQFHPG-SSGQQLQGMQAMGMMGSLN 314

Query: 172  LSSQIRANGPLSYXXXXXXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQL 351
            L+SQ+R N P  Y                        +    Q QNL R SSL  +NPQL
Sbjct: 315  LTSQMRGN-PALYAQQRINPGQMRQQLSQQN------ALTSPQVQNLQRTSSLAFMNPQL 367

Query: 352  SGLTQNGQSALMQNALSQQ-WLKQMQPGISAAGSPSYHIQPQQ-----LQRQQAFMP--- 504
            SGL QNGQ+ +MQN+L+QQ WLKQM  GI++  S  + +QP Q     LQ+QQ  +P   
Sbjct: 368  SGLAQNGQAGMMQNSLTQQQWLKQMS-GITSPNS--FRLQPNQRQALILQQQQQQLPSGQ 424

Query: 505  ---------QQLPSSPLHQKSMGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 657
                     QQ  S  +HQ+                                        
Sbjct: 425  LHQSSMSLNQQQISQIIHQQQQQSQIGQAQMSQSQQQQQLQQMQQQLQQQPQQQMQQQQQ 484

Query: 658  XXXXXXXXX-SPRMLGPAAQKSLSLTGSQPDA--SGATTPRGSSSQGTDASNQLLGKRKI 828
                      SPRM     QKS+SLTGSQPDA  SG TTP GSSSQGT+A+NQLLGKRKI
Sbjct: 485  QQMQINQQQPSPRMSSHPGQKSVSLTGSQPDATQSGTTTPGGSSSQGTEATNQLLGKRKI 544

Query: 829  QDLVSQVDPRGKLDPEVEDILLEIADDFIDSVTTFACSLAKHRKSSILESKDVLLHLEKN 1008
            QDLVSQVD   KLDP+VED+LLE+ADDFIDSVT+FACSLAKHRKSS+LE KD+LLHLEKN
Sbjct: 545  QDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKN 604

Query: 1009 WHLTIPGFSKDEQKYQRKSLPNELHMKRMETIRALMEPQQSQRDSSNAKSSANESVSNP 1185
             HLTIPGFS  E K+Q K++  +LH KR+  +RAL+E  + + ++SN K S  + + NP
Sbjct: 605  LHLTIPGFS-SEDKHQTKAVATDLHKKRLAMVRALLESSKPETNASNTKESIRQVMVNP 662


>gb|ESW07446.1| hypothetical protein PHAVU_010G130700g [Phaseolus vulgaris]
          Length = 587

 Score =  315 bits (808), Expect = 2e-83
 Identities = 190/389 (48%), Positives = 235/389 (60%), Gaps = 8/389 (2%)
 Frame = +1

Query: 43   QSQLLNQPRQKMGLVQGSQFHPANSSGQALQGMQTMGMMGSLGLSSQIRANGPLSYXXXX 222
            Q  LL+ PRQK GLVQ SQF   NS+GQ+LQGMQ MGM+GS  L+SQ+RANG ++Y    
Sbjct: 171  QFNLLSSPRQKGGLVQQSQFS-GNSAGQSLQGMQAMGMIGSQNLTSQLRANGAVAYAQQL 229

Query: 223  XXXXXXXXXXXXXXXXXXXASTQKLQGQNLARQSSLTALNPQLSGLTQNGQSALMQNALS 402
                               +S    Q Q L R SSL  +N QLSGL+QNGQ A++ N+L+
Sbjct: 230  RMSQGQIRQQMSQQ-----SSLNTGQVQGLPRSSSLAFMNSQLSGLSQNGQPAMVHNSLT 284

Query: 403  QQ-WLKQMQPGISAAGSPSYHIQPQQLQ-----RQQAFMPQQLPSSPLHQKSMGLNXXXX 564
            QQ WLKQM P +S+  SP    Q QQL      +Q +    Q   S L Q+   +     
Sbjct: 285  QQQWLKQM-PAMSSPASPLRLQQRQQLASSTQLQQNSISLNQQQLSQLIQQQKSIGQPQL 343

Query: 565  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRMLGPAAQKSLSLTGSQP 744
                                                    SPRM GPA QKS SLTGSQP
Sbjct: 344  HQQQQQQQPQQLQQQLQQQLIHQQPQQQSQPQASVHQQQQSPRMPGPAGQKSFSLTGSQP 403

Query: 745  DA--SGATTPRGSSSQGTDASNQLLGKRKIQDLVSQVDPRGKLDPEVEDILLEIADDFID 918
            DA  SGATTP GSSSQGT+A+NQ+LGKRKIQDLV+QVDP+G LDPEV D+LLE+ADDFID
Sbjct: 404  DATASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQVDPQGTLDPEVIDLLLELADDFID 463

Query: 919  SVTTFACSLAKHRKSSILESKDVLLHLEKNWHLTIPGFSKDEQKYQRKSLPNELHMKRME 1098
            S TT  C LAKHRKS  LESKD+LLHLEKNW LT+PG+S +E+KYQ K   N+LH +R++
Sbjct: 464  STTTHGCILAKHRKSPTLESKDLLLHLEKNWDLTVPGYSSEEKKYQSKPQLNDLHKRRLD 523

Query: 1099 TIRALMEPQQSQRDSSNAKSSANESVSNP 1185
             IR LME   S+ + +++K  + + +SNP
Sbjct: 524  MIRTLMESSASESNINSSKELSRQGISNP 552