BLASTX nr result

ID: Stemona21_contig00014221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00014221
         (261 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006374744.1| hypothetical protein POPTR_0014s00420g [Popu...    57   3e-06
ref|XP_006383287.1| hypothetical protein POPTR_0005s13880g [Popu...    56   4e-06

>ref|XP_006374744.1| hypothetical protein POPTR_0014s00420g [Populus trichocarpa]
           gi|550323003|gb|ERP52541.1| hypothetical protein
           POPTR_0014s00420g [Populus trichocarpa]
          Length = 260

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/71 (42%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
 Frame = -1

Query: 213 DNSDHLASQIGELAGAIRSIHRGIS--SELLSEVMKSEGYDEVSLGKAFDYLHVNENLGR 40
           D  + L+ QIG++  AI+S+ +     + L +EVMK EG+DE++LG+AFD+L  N+ L +
Sbjct: 174 DGVEKLSKQIGDVELAIQSLSKNQLDVNALYAEVMKIEGFDEITLGEAFDHLVQNKMLAK 233

Query: 39  AFLVKSSILRQ 7
           AF+ K++ LR+
Sbjct: 234 AFMAKNANLRK 244


>ref|XP_006383287.1| hypothetical protein POPTR_0005s13880g [Populus trichocarpa]
           gi|550338877|gb|ERP61084.1| hypothetical protein
           POPTR_0005s13880g [Populus trichocarpa]
          Length = 266

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
 Frame = -1

Query: 213 DNSDHLASQIGELAGAIRSIHRGISS--ELLSEVMKSEGYDEVSLGKAFDYLHVNENLGR 40
           D+ + L+++IG++A  I+S+ +   +  EL  EVMK +G++E++LG AFD+L  N+ L +
Sbjct: 188 DSVEKLSTKIGDVAFVIQSLRKNQLNVNELYIEVMKIKGFEEIALGDAFDHLVQNKMLAK 247

Query: 39  AFLVKSSILRQAW 1
           AF+ K   LR+ W
Sbjct: 248 AFMKKYDNLRKIW 260


Top