BLASTX nr result
ID: Stemona21_contig00013943
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00013943
(1032 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004978645.1| PREDICTED: DNA-directed RNA polymerases I, I... 214 4e-53
ref|XP_002450250.1| hypothetical protein SORBIDRAFT_05g002600 [S... 213 1e-52
tpg|DAA39210.1| TPA: DNA-directed RNA polymerase II polypeptide ... 211 4e-52
gb|ACG37268.1| DNA-directed RNA polymerase II 23 kDa polypeptide... 211 4e-52
ref|NP_001141853.1| uncharacterized protein LOC100273995 [Zea ma... 211 4e-52
ref|NP_001066119.1| Os12g0139500 [Oryza sativa Japonica Group] g... 207 4e-51
gb|ABA96407.2| RNA polymerase Rpb5, N-terminal domain containing... 207 4e-51
ref|XP_003576358.1| PREDICTED: uncharacterized protein LOC100836... 206 9e-51
dbj|BAJ92858.1| predicted protein [Hordeum vulgare subsp. vulgar... 206 9e-51
ref|NP_001065723.1| Os11g0143400 [Oryza sativa Japonica Group] g... 205 2e-50
emb|CBX25472.1| hypothetical_protein [Oryza glaberrima] 205 3e-50
ref|XP_006664324.1| PREDICTED: DNA-directed RNA polymerase V sub... 204 6e-50
ref|XP_006663193.1| PREDICTED: DNA-directed RNA polymerase V sub... 204 6e-50
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub... 203 1e-49
ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I... 202 1e-49
gb|EAY79909.1| hypothetical protein OsI_35073 [Oryza sativa Indi... 202 1e-49
emb|CBI30093.3| unnamed protein product [Vitis vinifera] 200 9e-49
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I... 200 9e-49
ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V sub... 197 7e-48
ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Popu... 197 7e-48
>ref|XP_004978645.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Setaria italica]
Length = 240
Score = 214 bits (545), Expect = 4e-53
Identities = 114/210 (54%), Positives = 143/210 (68%), Gaps = 1/210 (0%)
Frame = +1
Query: 58 CPSTWVD-DGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXX 234
C S+ +D GSVES RLFLARRT LEMLRDRG +V L TLP FRA + ++P+
Sbjct: 30 CISSMIDRGGSVESHRLFLARRTALEMLRDRGYSVPEAELARTLPEFRAWWAEKPELERL 89
Query: 235 XXXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAM 414
+FC E +K+ + I + V+ +NLSRLILILQ+ +T++SR ++
Sbjct: 90 AFSTALAADQSSKVKVVFCPPEPVKIAVIREIYSRVQEENLSRLILILQSKITSKSRESI 149
Query: 415 KEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAI 594
KEI FKV+ FQITELLVNITKH+LKP+HE+ YNV DSQLPRML+TDA+
Sbjct: 150 KEIFPFKVDTFQITELLVNITKHVLKPKHEVLTAEEKAKLLKEYNVVDSQLPRMLETDAV 209
Query: 595 ARYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
ARY+GL KG VVKVTY+ ELTG+HVTYRCI
Sbjct: 210 ARYHGLGKGTVVKVTYDSELTGNHVTYRCI 239
>ref|XP_002450250.1| hypothetical protein SORBIDRAFT_05g002600 [Sorghum bicolor]
gi|241936093|gb|EES09238.1| hypothetical protein
SORBIDRAFT_05g002600 [Sorghum bicolor]
Length = 263
Score = 213 bits (541), Expect = 1e-52
Identities = 114/210 (54%), Positives = 139/210 (66%), Gaps = 1/210 (0%)
Frame = +1
Query: 58 CPSTWVD-DGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXX 234
C S +D GSVES RLFLARRT LEMLRDRG AV D L TLP FRA + D+P+
Sbjct: 53 CISAMLDLGGSVESKRLFLARRTALEMLRDRGYAVPEDELARTLPEFRAWWEDKPELERL 112
Query: 235 XXXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAM 414
+FC E +K+ A+ + T V+ +NLSRLILILQ + +++R A+
Sbjct: 113 AFSTTLASDPSSKVKVVFCPPEPVKIAAIRVVYTGVKDENLSRLILILQGRIMSKAREAI 172
Query: 415 KEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAI 594
KEI +KV+ FQITELLVNITKH LKP+H++ YNV DSQLPRML+ DA+
Sbjct: 173 KEIFPYKVDTFQITELLVNITKHALKPKHQVLTAEEKAKLLKEYNVVDSQLPRMLENDAV 232
Query: 595 ARYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
ARYYGL KG VVKV Y+ ELTG+HVTYRCI
Sbjct: 233 ARYYGLGKGTVVKVIYDSELTGNHVTYRCI 262
>tpg|DAA39210.1| TPA: DNA-directed RNA polymerase II polypeptide [Zea mays]
Length = 263
Score = 211 bits (537), Expect = 4e-52
Identities = 115/211 (54%), Positives = 140/211 (66%), Gaps = 1/211 (0%)
Frame = +1
Query: 58 CPSTWVD-DGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXX 234
C ST +D GSVES RLFLARRT LEMLRDRG AV + L TLP FRA + +P+
Sbjct: 53 CISTMLDRGGSVESHRLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERL 112
Query: 235 XXXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAM 414
+FC +K+ A+ I T+V+ +NLSRLILILQ + + +R ++
Sbjct: 113 AFSTTLTSDPSSKVKVVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESI 172
Query: 415 KEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAI 594
KEI FKV+ FQITELLVNITKH+LKP+HE+ YNV DSQLPRML+ DA+
Sbjct: 173 KEIFRFKVDTFQITELLVNITKHVLKPKHEVLTAEGKAKLLKEYNVVDSQLPRMLENDAV 232
Query: 595 ARYYGLEKGQVVKVTYEGELTGSHVTYRCIT 687
ARYYGL KG VVKV Y+ ELTG+HVTYRCIT
Sbjct: 233 ARYYGLGKGTVVKVIYDSELTGNHVTYRCIT 263
>gb|ACG37268.1| DNA-directed RNA polymerase II 23 kDa polypeptide [Zea mays]
Length = 264
Score = 211 bits (537), Expect = 4e-52
Identities = 115/211 (54%), Positives = 140/211 (66%), Gaps = 1/211 (0%)
Frame = +1
Query: 58 CPSTWVD-DGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXX 234
C ST +D GSVES RLFLARRT LEMLRDRG AV + L TLP FRA + +P+
Sbjct: 54 CISTMLDRGGSVESHRLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERL 113
Query: 235 XXXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAM 414
+FC +K+ A+ I T+V+ +NLSRLILILQ + + +R ++
Sbjct: 114 AFSTTLASDPSSKVKVVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESI 173
Query: 415 KEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAI 594
KEI FKV+ FQITELLVNITKH+LKP+HE+ YNV DSQLPRML+ DA+
Sbjct: 174 KEIFRFKVDTFQITELLVNITKHVLKPKHEVLTAEGKAKLLKEYNVVDSQLPRMLENDAV 233
Query: 595 ARYYGLEKGQVVKVTYEGELTGSHVTYRCIT 687
ARYYGL KG VVKV Y+ ELTG+HVTYRCIT
Sbjct: 234 ARYYGLGKGTVVKVIYDSELTGNHVTYRCIT 264
>ref|NP_001141853.1| uncharacterized protein LOC100273995 [Zea mays]
gi|194706176|gb|ACF87172.1| unknown [Zea mays]
Length = 248
Score = 211 bits (537), Expect = 4e-52
Identities = 115/211 (54%), Positives = 140/211 (66%), Gaps = 1/211 (0%)
Frame = +1
Query: 58 CPSTWVD-DGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXX 234
C ST +D GSVES RLFLARRT LEMLRDRG AV + L TLP FRA + +P+
Sbjct: 38 CISTMLDRGGSVESHRLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERL 97
Query: 235 XXXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAM 414
+FC +K+ A+ I T+V+ +NLSRLILILQ + + +R ++
Sbjct: 98 AFSTTLTSDPSSKVKVVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESI 157
Query: 415 KEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAI 594
KEI FKV+ FQITELLVNITKH+LKP+HE+ YNV DSQLPRML+ DA+
Sbjct: 158 KEIFRFKVDTFQITELLVNITKHVLKPKHEVLTAEGKAKLLKEYNVVDSQLPRMLENDAV 217
Query: 595 ARYYGLEKGQVVKVTYEGELTGSHVTYRCIT 687
ARYYGL KG VVKV Y+ ELTG+HVTYRCIT
Sbjct: 218 ARYYGLGKGTVVKVIYDSELTGNHVTYRCIT 248
>ref|NP_001066119.1| Os12g0139500 [Oryza sativa Japonica Group]
gi|113648626|dbj|BAF29138.1| Os12g0139500 [Oryza sativa
Japonica Group] gi|125535725|gb|EAY82213.1| hypothetical
protein OsI_37416 [Oryza sativa Indica Group]
gi|125578454|gb|EAZ19600.1| hypothetical protein
OsJ_35178 [Oryza sativa Japonica Group]
gi|346703760|emb|CBX24428.1| hypothetical_protein [Oryza
glaberrima]
Length = 227
Score = 207 bits (528), Expect = 4e-51
Identities = 105/209 (50%), Positives = 137/209 (65%)
Frame = +1
Query: 58 CPSTWVDDGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXXX 237
C ++ +D GSVES RLFLARRT +EMLRDRG +V + TLP FRA + ++P
Sbjct: 18 CIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLA 77
Query: 238 XXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAMK 417
+FC E +K+ + I + +NLSRL+LILQ+ + +R+R A+K
Sbjct: 78 FTTTLVSDPSKKVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIK 137
Query: 418 EITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAIA 597
EI FKV+ FQ T+LLVNITKH+LKP+HE+ YNV+DSQLPRML+TDA+A
Sbjct: 138 EIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLETDAVA 197
Query: 598 RYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
RYYG +KG VVKVTY+GELTG V YRC+
Sbjct: 198 RYYGFDKGTVVKVTYDGELTGKRVAYRCV 226
>gb|ABA96407.2| RNA polymerase Rpb5, N-terminal domain containing protein,
expressed [Oryza sativa Japonica Group]
Length = 335
Score = 207 bits (528), Expect = 4e-51
Identities = 105/209 (50%), Positives = 137/209 (65%)
Frame = +1
Query: 58 CPSTWVDDGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXXX 237
C ++ +D GSVES RLFLARRT +EMLRDRG +V + TLP FRA + ++P
Sbjct: 126 CIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLA 185
Query: 238 XXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAMK 417
+FC E +K+ + I + +NLSRL+LILQ+ + +R+R A+K
Sbjct: 186 FTTTLVSDPSKKVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIK 245
Query: 418 EITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAIA 597
EI FKV+ FQ T+LLVNITKH+LKP+HE+ YNV+DSQLPRML+TDA+A
Sbjct: 246 EIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLETDAVA 305
Query: 598 RYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
RYYG +KG VVKVTY+GELTG V YRC+
Sbjct: 306 RYYGFDKGTVVKVTYDGELTGKRVAYRCV 334
>ref|XP_003576358.1| PREDICTED: uncharacterized protein LOC100836489 [Brachypodium
distachyon]
Length = 468
Score = 206 bits (525), Expect = 9e-51
Identities = 108/209 (51%), Positives = 137/209 (65%)
Frame = +1
Query: 58 CPSTWVDDGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXXX 237
C S+ +D G ES RLFLARRT LEMLRDR AV L TLP FRA + ++P+
Sbjct: 259 CVSSMIDSGDPESHRLFLARRTALEMLRDRRYAVPEADLARTLPEFRAWWAERPEIDRLS 318
Query: 238 XXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAMK 417
+FC E K+ A+ + V+ +NLS LIL+LQ+ +T+R++ A+K
Sbjct: 319 FSTTLASDPSNKVQLVFCPPEPFKIAAIREVYGRVKDENLSCLILVLQSKITSRAKDAIK 378
Query: 418 EITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAIA 597
EI +KV+ FQI ELLVN+TKH+LKP HE+ YNV DSQLPRML+TDAIA
Sbjct: 379 EIFKYKVDVFQIAELLVNVTKHVLKPEHEVLTPEEKAHLLKKYNVVDSQLPRMLETDAIA 438
Query: 598 RYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
RYYGL KG V++VTY+GELTG+HVTYRCI
Sbjct: 439 RYYGLGKGTVLRVTYDGELTGNHVTYRCI 467
>dbj|BAJ92858.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531658|dbj|BAJ97833.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 251
Score = 206 bits (525), Expect = 9e-51
Identities = 113/212 (53%), Positives = 137/212 (64%), Gaps = 3/212 (1%)
Frame = +1
Query: 58 CPSTWVDDGS---VESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXX 228
C S+ VD G VES RLFLARRT LEMLRDRG +V D L TLP FRA + + P+
Sbjct: 39 CISSMVDLGGAAGVESQRLFLARRTALEMLRDRGYSVPEDELARTLPEFRAWWSETPEIE 98
Query: 229 XXXXXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRA 408
+FC E +K+ A+ + ++ +NLS LILILQ+ +TAR+R
Sbjct: 99 RLSFSTTLASDPSSKVRIVFCPPEPVKIAAIREVHLRIKEENLSCLILILQSKITARARE 158
Query: 409 AMKEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTD 588
++KEI FKV+ FQITELLVNITKH+LKP HE+ YNV DSQLPRML+TD
Sbjct: 159 SIKEIFKFKVDVFQITELLVNITKHVLKPNHEVLTAEEKAKLLKEYNVVDSQLPRMLETD 218
Query: 589 AIARYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
A+ARYYGL KG VVK TY+ ELT HVTYRCI
Sbjct: 219 AVARYYGLGKGTVVKFTYDNELTVDHVTYRCI 250
>ref|NP_001065723.1| Os11g0143400 [Oryza sativa Japonica Group]
gi|77548620|gb|ABA91417.1| RNA polymerase Rpb5,
N-terminal domain containing protein, expressed [Oryza
sativa Japonica Group] gi|113644427|dbj|BAF27568.1|
Os11g0143400 [Oryza sativa Japonica Group]
gi|125576186|gb|EAZ17408.1| hypothetical protein
OsJ_32930 [Oryza sativa Japonica Group]
Length = 227
Score = 205 bits (522), Expect = 2e-50
Identities = 104/209 (49%), Positives = 136/209 (65%)
Frame = +1
Query: 58 CPSTWVDDGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXXX 237
C ++ +D GSVES RLFLARRT +EMLRDRG +V + TLP FRA + ++P
Sbjct: 18 CIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLA 77
Query: 238 XXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAMK 417
+FC E +K+ + I + +NLSRL+LILQ+ + +R+R A+K
Sbjct: 78 FTTTLVSDPSKKVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIK 137
Query: 418 EITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAIA 597
EI FKV+ FQ T+LLVNITKH+LKP+HE+ YNV+DSQLPRML+TDA+A
Sbjct: 138 EIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLETDAVA 197
Query: 598 RYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
RYYG +KG VVKV Y+GELTG V YRC+
Sbjct: 198 RYYGFDKGTVVKVIYDGELTGKRVAYRCV 226
>emb|CBX25472.1| hypothetical_protein [Oryza glaberrima]
Length = 206
Score = 205 bits (521), Expect = 3e-50
Identities = 104/204 (50%), Positives = 134/204 (65%)
Frame = +1
Query: 73 VDDGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXXXXXXXX 252
+D GSVES RLFLARRT +EMLRDRG +V + TLP FRA + ++P
Sbjct: 2 IDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTL 61
Query: 253 XXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAMKEITAF 432
+FC E +K+ + I + +NLSRL+LILQ+ + +R+R A+KEI F
Sbjct: 62 VSDPSKKVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 121
Query: 433 KVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAIARYYGL 612
KV+ FQ T+LLVNITKH+LKP+HE+ YNV+DSQLPRML+TDA+ARYYG
Sbjct: 122 KVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLETDAVARYYGF 181
Query: 613 EKGQVVKVTYEGELTGSHVTYRCI 684
+KG VVKVTY+GELTG V YRC+
Sbjct: 182 DKGTVVKVTYDGELTGKRVAYRCV 205
>ref|XP_006664324.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Oryza
brachyantha]
Length = 283
Score = 204 bits (518), Expect = 6e-50
Identities = 106/210 (50%), Positives = 138/210 (65%), Gaps = 1/210 (0%)
Frame = +1
Query: 58 CPSTWVD-DGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXX 234
C ++ VD GSVES RLFLARRT LEMLRDRG +V + + TLP FRA +G++ +
Sbjct: 73 CIASMVDRSGSVESKRLFLARRTALEMLRDRGYSVPDEEIARTLPEFRAWWGEKSEIERL 132
Query: 235 XXXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAM 414
+FC E +K+ + I +NLSRLILILQ+ + +R+R ++
Sbjct: 133 AFTTTLVSDPSKKVQIVFCPPEPVKIATIREIYRQTEGENLSRLILILQSRILSRARESI 192
Query: 415 KEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAI 594
KEI KV+ FQ+TELLVNITKH+LKP+HE+ YNV+DSQLPRML+TD +
Sbjct: 193 KEIFKLKVDIFQVTELLVNITKHVLKPKHEVLSAAQKAKLLKQYNVEDSQLPRMLETDPV 252
Query: 595 ARYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
ARYYGL+KG VVKV Y+ ELTG+HV YRC+
Sbjct: 253 ARYYGLDKGTVVKVIYDSELTGNHVAYRCV 282
>ref|XP_006663193.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Oryza
brachyantha] gi|346703190|emb|CBX25289.1|
hypothetical_protein [Oryza brachyantha]
Length = 288
Score = 204 bits (518), Expect = 6e-50
Identities = 106/210 (50%), Positives = 138/210 (65%), Gaps = 1/210 (0%)
Frame = +1
Query: 58 CPSTWVD-DGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXX 234
C ++ VD GSVES RLFLARRT LEMLRDRG +V + + TLP FRA +G++ +
Sbjct: 78 CIASMVDRSGSVESKRLFLARRTALEMLRDRGYSVPEEEIARTLPEFRAWWGEKSEIERL 137
Query: 235 XXXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAM 414
+FC E +K+ + I +NLSRLILILQ+ + +R+R ++
Sbjct: 138 AFTTTLVSDPSKKVQIVFCPPEPVKIATIREIYRQTEGENLSRLILILQSRILSRARESI 197
Query: 415 KEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAI 594
KEI KV+ FQ+TELLVNITKH+LKP+HE+ YNV+DSQLPRML+TD +
Sbjct: 198 KEIFKLKVDIFQVTELLVNITKHVLKPKHEVLSAAQKAKLLKQYNVEDSQLPRMLETDPV 257
Query: 595 ARYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
ARYYGL+KG VVKV Y+ ELTG+HV YRC+
Sbjct: 258 ARYYGLDKGTVVKVIYDSELTGNHVAYRCV 287
>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 203 bits (516), Expect = 1e-49
Identities = 106/210 (50%), Positives = 139/210 (66%), Gaps = 1/210 (0%)
Frame = +1
Query: 58 CPSTWVDDGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXXX 237
C +++VDDG+VES R FLARRT+LEML+DRG A+ ++ TL FR +G PD
Sbjct: 18 CLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQEFREKYGQTPDVERLR 77
Query: 238 XXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDV-RRDNLSRLILILQNTMTARSRAAM 414
IFCG +K+ + +ILT + +++LSRLIL++QN MT + A+
Sbjct: 78 VSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRLILVIQNQMTNPAMKAV 137
Query: 415 KEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAI 594
E+ +FKVE FQIT+LLVNITKH+LKPRHE+ YN+++ QLPRM Q DAI
Sbjct: 138 -ELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKYNLEEKQLPRMSQKDAI 196
Query: 595 ARYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
ARYYGLEKGQVVKVTY E+ +HVTYRC+
Sbjct: 197 ARYYGLEKGQVVKVTYSSEIIETHVTYRCV 226
>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 202 bits (515), Expect = 1e-49
Identities = 106/210 (50%), Positives = 139/210 (66%), Gaps = 1/210 (0%)
Frame = +1
Query: 58 CPSTWVDDGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXXX 237
C +++VDDG+VES R FLARRT+LEML+DRG A+ ++ TL FR +G PD
Sbjct: 18 CLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQEFREKYGQTPDVERLR 77
Query: 238 XXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDV-RRDNLSRLILILQNTMTARSRAAM 414
IFCG +K+ + +ILT + +++LSRLIL++QN MT + A+
Sbjct: 78 VSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRLILVIQNQMTNPALKAV 137
Query: 415 KEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAI 594
E+ +FKVE FQIT+LLVNITKH+LKPRHE+ YN+++ QLPRM Q DAI
Sbjct: 138 -ELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKYNLEEKQLPRMSQKDAI 196
Query: 595 ARYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
ARYYGLEKGQVVKVTY E+ +HVTYRC+
Sbjct: 197 ARYYGLEKGQVVKVTYSSEIIETHVTYRCV 226
>gb|EAY79909.1| hypothetical protein OsI_35073 [Oryza sativa Indica Group]
Length = 227
Score = 202 bits (515), Expect = 1e-49
Identities = 103/209 (49%), Positives = 135/209 (64%)
Frame = +1
Query: 58 CPSTWVDDGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXXX 237
C ++ +D GSVES RLFLARRT +EMLRDRG +V + T P FRA + ++P
Sbjct: 18 CIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTPPEFRAWWAEKPGIERLA 77
Query: 238 XXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVRRDNLSRLILILQNTMTARSRAAMK 417
+FC E +K+ + I + +NLSRL+LILQ+ + +R+R A+K
Sbjct: 78 FTTTLVSDPSKKVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIK 137
Query: 418 EITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAIA 597
EI FKV+ FQ T+LLVNITKH+LKP+HE+ YNV+DSQLPRML+TDA+A
Sbjct: 138 EIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLETDAVA 197
Query: 598 RYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
RYYG +KG VVKV Y+GELTG V YRC+
Sbjct: 198 RYYGFDKGTVVKVIYDGELTGKRVAYRCV 226
>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 200 bits (508), Expect = 9e-49
Identities = 102/210 (48%), Positives = 145/210 (69%), Gaps = 1/210 (0%)
Frame = +1
Query: 58 CPSTWVDDGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXXX 237
C S++VD+G +ES R +LARRT+LEMLRDRG ++ ++++L FR+ + +PD
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180
Query: 238 XXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTD-VRRDNLSRLILILQNTMTARSRAAM 414
IFCG + +K+ A+ +I T V +D+LS+LIL+LQN +T+++ A+
Sbjct: 181 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 240
Query: 415 KEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAI 594
++ +F+VE+FQIT+LLVNITKH+LKP+H + Y++ + QLPRMLQ DAI
Sbjct: 241 -DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAI 299
Query: 595 ARYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
ARYYGLEKGQVVKV Y GE+TGSHVTYRC+
Sbjct: 300 ARYYGLEKGQVVKVIYNGEITGSHVTYRCV 329
>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Vitis vinifera]
Length = 229
Score = 200 bits (508), Expect = 9e-49
Identities = 102/210 (48%), Positives = 145/210 (69%), Gaps = 1/210 (0%)
Frame = +1
Query: 58 CPSTWVDDGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXXX 237
C S++VD+G +ES R +LARRT+LEMLRDRG ++ ++++L FR+ + +PD
Sbjct: 20 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79
Query: 238 XXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTD-VRRDNLSRLILILQNTMTARSRAAM 414
IFCG + +K+ A+ +I T V +D+LS+LIL+LQN +T+++ A+
Sbjct: 80 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 139
Query: 415 KEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTDAI 594
++ +F+VE+FQIT+LLVNITKH+LKP+H + Y++ + QLPRMLQ DAI
Sbjct: 140 -DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAI 198
Query: 595 ARYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
ARYYGLEKGQVVKV Y GE+TGSHVTYRC+
Sbjct: 199 ARYYGLEKGQVVKVIYNGEITGSHVTYRCV 228
>ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 197 bits (500), Expect = 7e-48
Identities = 105/212 (49%), Positives = 138/212 (65%), Gaps = 3/212 (1%)
Frame = +1
Query: 58 CPSTWVDDGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLPAFRASFGDQPDXXXXX 237
C +++VDDG+VES R FLAR+T+LEML+DRG A+ ++ TL FR +G +PD
Sbjct: 18 CLASFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIDTTLQEFREKYGQRPDAERLR 77
Query: 238 XXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDV-RRDNLSRLILILQNTMTARSRAAM 414
IFCG +K+ + +IL+ + +++LSRLILI++N MT AM
Sbjct: 78 ISAMHRTDLTNKVLVIFCGPNSVKMNVIRSILSQIMNKESLSRLILIIENPMT---NPAM 134
Query: 415 K--EITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXYNVKDSQLPRMLQTD 588
K E + FK E FQIT+LLVNITKH+LKP+HE+ YN++D QLPRM Q D
Sbjct: 135 KVVEDSPFKTEIFQITDLLVNITKHVLKPKHELLTNTEKEQLLKKYNLEDKQLPRMSQKD 194
Query: 589 AIARYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
AIARYYGLEKGQVVKVTY E+ +HVTYRC+
Sbjct: 195 AIARYYGLEKGQVVKVTYNNEIIETHVTYRCV 226
>ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Populus trichocarpa]
gi|550320761|gb|EEF05018.2| hypothetical protein
POPTR_0016s03800g [Populus trichocarpa]
Length = 243
Score = 197 bits (500), Expect = 7e-48
Identities = 103/226 (45%), Positives = 147/226 (65%), Gaps = 1/226 (0%)
Frame = +1
Query: 10 RERGSEGMDISXXXXXCPSTWVDDGSVESLRLFLARRTVLEMLRDRGCAVDPDHLNLTLP 189
+E GS GM+ C S++VD+GS ES R +L+RRTVLEML+DRG +V ++++L
Sbjct: 21 KENGSFGME---SLGRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQ 77
Query: 190 AFRASFGDQPDXXXXXXXXXXXXXXXXXXXXIFCGTEKLKLPAVNAILTDVR-RDNLSRL 366
FR +G PD IFCG +K+ + I + RD+L+ L
Sbjct: 78 DFRGVYGQNPDIELLKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGL 137
Query: 367 ILILQNTMTARSRAAMKEITAFKVEQFQITELLVNITKHILKPRHEIXXXXXXXXXXXXY 546
IL+LQN +T ++ A+ ++ FK+E FQIT+LLVNITKHILKP+H++ Y
Sbjct: 138 ILVLQNNITNQAMKAL-DLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKY 196
Query: 547 NVKDSQLPRMLQTDAIARYYGLEKGQVVKVTYEGELTGSHVTYRCI 684
++++ QLPR+L+ DAI+RYYGLE+GQVVKVTY+G++TGSHVTYRC+
Sbjct: 197 SIEEKQLPRLLKKDAISRYYGLERGQVVKVTYDGDITGSHVTYRCV 242